v-pipe¶
V-pipe is a bioinformatics pipeline that integrates various computational tools for the analysis of viral high-throughput sequencing data. It supports the reproducible analysis of genomic diversity in intra-host virus populations, which is often involved in viral pathogenesis and virulence.
Environment Modules¶
Run module spider v-pipe to find out what environment modules are available for this application.
System Variables¶
- HPC_VPIPE_DIR - installation directory
- HPC_VPIPE_BIN - executable directory