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seqtk

seqtk website

Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.

Environment Modules

Run module spider seqtk to find out what environment modules are available for this application.

System Variables

  • HPC_SEQTK_DIR - installation directory
  • HPC_SEQTK_BIN - executable directory