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pipits

pipits website

PIPITS is an automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform.

Environment Modules

Run module spider pipits to find out what environment modules are available for this application.

System Variables

  • HPC_PIPITS_DIR - installation directory
  • HPC_PIPITS_BIN - executable directory
  • ITSX_DB - ITSx database directory