juicer¶
Juicer is a platform for analyzing kilobase resolution Hi-C data. In this distribution, we include the pipeline for generating Hi-C maps from fastq raw data files and command line tools for feature annotation on the Hi-C maps.
Environment Modules¶
Run module spider juicer to find out what environment modules are available for this application.
System Variables¶
- HPC_JUICER_DIR - installation directory
- HPC_JUICER_BIN - executable directory