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hapbin

hapbin website

hapbin is a collection of tools for efficiently calculating Extended Haplotype Homozygosity (EHH), the Integrated Haplotype Score (iHS) and the Cross Population Extended Haplotype Homozogysity (XP-EHH) statistic.

Environment Modules

Run module spider hapbin to find out what environment modules are available for this application.

System Variables

  • HPC_HAPBIN_DIR - installation directory
  • HPC_HAPBIN_BIN - executable directory