eddy-squeeze¶
eddy-squeeze is a tool that visualizes the signal replacements by FSL Eddy with --repol option. In addition to the visualization, it also collects measures like motions, number of outliers and post-eddy translations rom multiple eddy outputs into a csv and html file, for easier QC of FSL Eddy outputs.
Environment Modules¶
Run module spider eddy-squeeze to find out what environment modules are available for this application.
System Variables¶
- HPC_EDDYSQUEEZE_DIR - installation directory
- HPC_EDDYSQUEEZE_BIN - executable directory