bakta¶
Bakta is a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides dbxref-rich and sORF-including annotations in machine-readable JSON & bioinformatics standard file formats for automatic downstream analysis.
Environment Modules¶
Run module spider bakta to find out what environment modules are available for this application.
System Variables¶
- HPC_BAKTA_DIR - installation directory
- HPC_BAKTA_BIN - executable directory
- BAKTA_DB - reference database directory