VSearch¶
VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering and conversion.
Environment Modules¶
Run module spider VSearch to find out what environment modules are available for this application.
System Variables¶
- HPC_VSEARCH_DIR - installation directory
- HPC_VSEARCH_BIN - executable directory