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Trimmomatic

Trimmomatic website

Trimmomatic performs a variety of useful trimming tasks for Illumina paired-end and single ended data.The selection of trimming steps and their associated parameters are supplied on the command line.

Environment Modules

Run module spider Trimmomatic to find out what environment modules are available for this application.

System Variables

  • HPC_TRIMMOMATIC_DIR - installation directory
  • HPC_TRIMMOMATIC_BIN - executable directory
  • HPC_TRIMMOMATIC_LIB - jar file directory