TransDecoder¶
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
Environment Modules¶
Run module spider TransDecoder to find out what environment modules are available for this application.
System Variables¶
- HPC_TRANSDECODER_DIR - installation directory
- HPC_TRANSDECODER_DOC - documentation directory