TraCeR¶
This tool reconstructs the sequences of rearranged and expressed T cell receptor genes from single-cell RNA-seq data. It then uses the TCR sequences to identify cells that have the same receptor sequences and so derive from the same original clonally-expanded cell.
Environment Modules¶
Run module spider TraCeR to find out what environment modules are available for this application.
System Variables¶
- HPC_TRACER_DIR - installation directory
- HPC_TRACER_BIN - executable directory
- HPC_TRACER_DOC - documentation directory
- HPC_TRACER_EXE - examples directory