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SpinalCordToolbox

SpinalCordToolbox website

Spinal Cord Toolbox (SCT) is a comprehensive, free and open-source set of command-line tools dedicated to the processing and analysis of spinal cord MRI data.

Environment Modules

Run module spider SpinalCordToolbox to find out what environment modules are available for this application.

System Variables

  • HPC_SPINALCORDTOOLBOX_DIR - installation directory
  • HPC_SPINALCORDTOOLBOX_BIN - executable directory