SnpEff¶
SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes).
Environment Modules¶
Run module spider SnpEff to find out what environment modules are available for this application.
System Variables¶
- HPC_SNPEFF_DIR - installation directory
- HPC_SNPEFF_BIN - executable directory
- HPC_SNPEFF_CONF - configuration file directory
- HPC_SNPEFF_EX - examples directory