Simka¶
Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.
Environment Modules¶
Run module spider Simka to find out what environment modules are available for this application.
System Variables¶
- HPC_SIMKA_DIR - installation directory
- HPC_SIMKA_BIN - executable directory