SeCaPr¶
This semi-automated pipeline aims to make the processing and analysis of sequence capture (= target enrichment) data simple and straight forward for all users. The detailed documentation and simple installation makes this pipeline accessible also for users with limited biofinformatic knowledge, while enabling user-defined processing options for the more experienced users.
Environment Modules¶
Run module spider SeCaPr to find out what environment modules are available for this application.
System Variables¶
- HPC_SECAPR_DIR - installation directory
- HPC_SECAPR_BIN - executable directory