Scythe¶
Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads. It considers quality information, which can make it robust in picking out 3'-end adapters, which often include poor quality bases.
Environment Modules¶
Run module spider Scythe to find out what environment modules are available for this application.
System Variables¶
- HPC_SCYTHE_DIR
- HPC_SCYTHE_BIN
- HPC_SCYTHE_DOC