Sate¶
SATé is a software package for inferring a sequence alignment and phylogenetic tree. The iterative algorithm involves repeated alignment and tree searching operations. The original data set is divided into smaller subproblems by a tree-based decomposition. These subproblems are aligned and further merged for phylogenetic tree inference.
Environment Modules¶
Run module spider Sate to find out what environment modules are available for this application.
System Variables¶
- HPC_SATE_DIR - installation directory
- HPC_SATE_BIN - executable directory