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Sambamba

Sambamba website

Sambamba is a high performance modern robust and fast tool written in the D programming language for working with SAM and BAM files. Current parallelised functionality is an important subset of samtools functionality, including view, index, sort, markdup, and depth.

Environment Modules

Run module spider Sambamba to find out what environment modules are available for this application.

System Variables

  • HPC_SAMBAMBA_DIR