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SRA

SRA website

SRA is the NCBI Short Read Archive toolkit. The toolkit generates loading and dumping tools with their respective libraries for building new and accessing existing runs.

Environment Modules

Run module spider SRA to find out what environment modules are available for this application.

System Variables

  • HPC_SRA_DIR - location of the installation directory
  • HPC_SRA_BIN - location of the executables directory
  • HPC_SRA_DOC - location of the documentation directory