SCRIPTURE¶
Scripture is a method for transcriptome reconstruction that relies solely on RNA-Seq reads and an assembled genome to build a transcriptome ab initio. The statistical methods to estimate read coverage significance are also applicable to other sequencing data. Scripture also has modules for ChIP-Seq peak calling.
Environment Modules¶
Run module spider SCRIPTURE to find out what environment modules are available for this application.
System Variables¶
- HPC_SCRIPTURE_DIR - installation directory
- HPC_SCRIPTURE_BIN - executable directory
- HPC_SCRIPTURE_LIB - library directory