QUAST¶
QUAST stands for QUality ASsessment Tool. The tool evaluates genome assemblies by computing various metrics. This document provides instructions for the general QUAST tool for genome assemblies, MetaQUAST, the extension for metagenomic datasets, and Icarus, interactive visualizer for these tools.
Environment Modules¶
Run module spider QUAST to find out what environment modules are available for this application.
System Variables¶
- HPC_QUAST_DIR - installation directory
- HPC_QUAST_BIN - executable directory