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PyHIST

PyHIST website

PyHIST is a Histological Image Segmentation Tool: a lightweight semi-automatic command-line tool to extract tiles from histopathology whole image slides. It is intended to be an easy-to-use tool to preprocess histological image data for usage in machine learning tasks.

Environment Modules

Run module spider PyHIST to find out what environment modules are available for this application.

System Variables

  • HPC_PYHIST_DIR - installation directory
  • HPC_PYHIST_BIN - executable directory