Piranha¶
Piranha is a peak-caller for CLIP- and RIP-Seq data. It takes input in BED or BAM format and identifies regions of statistically significant read enrichment. Additional covariates may optionally be provided to further inform the peak-calling process.
Environment Modules¶
Run module spider Piranha to find out what environment modules are available for this application.
System Variables¶
- HPC_PIRANHA_DIR - installation directory
- HPC_PIRANHA_BIN - executable directory
- HPC_PIRANHA_SCRIPTS - scripts directory