OrthoFinder¶
OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.
Environment Modules¶
Run module spider OrthoFinder to find out what environment modules are available for this application.
System Variables¶
- HPC_ORTHOFINDER_DIR - installation directory
- HPC_ORTHOFINDER_BIN - executable directory