NGS-SDK¶
NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end "engines".
Environment Modules¶
Run module spider NGS-SDK to find out what environment modules are available for this application.
System Variables¶
- HPC_NGSSDK_DIR - installation directory
- HPC_NGSSDK_BIN - executable directory
- HPC_NGSSDK_LIB - library directory
- HPC_NGSSDK_INC - includes directory
- HPC_NGSSDK_JAVA - java bindings directory
- HPC_NGSSDK_PYTHON - python bindings directory