Megalodon¶
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transcriptome.
Environment Modules¶
Run module spider Megalodon to find out what environment modules are available for this application.
System Variables¶
- HPC_MEGALODON_DIR - installation directory
- HPC_MEGALODON_BIN - executable directory