Medaka

Medaka website

Medaka demonstrates a framework for error correcting sequencing data, particularly aimed at nanopore sequencing. Tools are provided for both training and inference. The code exploits the keras deep learning library.

Environment Modules

Run module spider Medaka to find out what environment modules are available for this application.

System Variables

• HPC_MEDAKA_DIR - installation directory
• HPC_MEDAKA_BIN - executable directory