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MarkerMiner

MarkerMiner website

MarkerMiner identifies clusters of single-copy gene transcripts present in each user-provided transcriptome assembly by aligning and filtering transcripts against a user-selected reference proteome database. MarkerMiner then generates a detailed tabular report of results.

Environment Modules

Run module spider MarkerMiner to find out what environment modules are available for this application.

System Variables

  • HPC_MARKERMINER_DIR - installation directory
  • HPC_MARKERMINER_BIN - executable directory