MAGMA-GWAS¶
MAGMA is a tool for gene analysis and generalized gene-set analysis of GWAS data. It can be used to analyse both raw genotype data as well as summary SNP p-values from a previous GWAS or meta-analysis.
Environment Modules¶
Run module spider MAGMA-GWAS to find out what environment modules are available for this application.
System Variables¶
- HPC_MAGMAGWAS_DIR - installation directory
- HPC_MAGMAGWAS_BIN - executable directory
- HPC_MAGMAGWAS_DOC - documentation directory