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MAFFT

MAFFT website

Multiple sequence alignment program (MAFFT) for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc

Environment Modules

Run module spider MAFFT to find out what environment modules are available for this application.

System Variables

  • HPC_MAFFT_DIR - installation directory
  • HPC_MAFFT_BIN - executable directory