LTRRetriever¶
LTR_retriever is a command line program (in Perl) for accurate identification of LTR retrotransposons (LTR-RTs) from outputs of LTRharvest, LTR_FINDER, and/or MGEScan-LTR and generating non-redundant LTR-RT library for genome annotations.
Environment Modules¶
Run module spider LTRRetriever to find out what environment modules are available for this application.
System Variables¶
- HPC_LTRRETRIEVER_DIR - installation directory
- HPC_LTRRETRIEVER_BIN - executable directory
- HPC_LTRRETRIEVER_DOC - documentation directory
- HPC_LTRRETRIEVER_DBD - database directory