HybPiper¶
HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest, especially for phylogenetics. HybPiper is a suite of Python scripts that wrap and connect bioinformatics tools in order to extract target sequences from high-throughput DNA sequencing reads.
Environment Modules¶
Run module spider HybPiper to find out what environment modules are available for this application.
System Variables¶
- HPC_HYBPIPER_DIR - installation directory
- HPC_HYBPIPER_BIN - executable directory
- HPC_HYBPIPER_DOC - documentation directory
- HPC_HYBPIPER_EXE - examples directory