HyPhy¶
This module enables the use of the HyPhy molecular evolution and statistical sequence analysis software package developed by members of the Viral Evolution Group at the School of Medicine at UCSD and collaborators. HyPhy is a feature rich and mature (in development since 1997), scriptable and fast maximum likelihood sequence analysis software platform with over 6000 registered users and over 500 citations in peer reviewed literature.
Environment Modules¶
Run module spider HyPhy to find out what environment modules are available for this application.
System Variables¶
- HPC_HYPHY_DIR - installation directory, also available as HYPHY_BASE_DIRECTORY.
- HPC_HYPHY_BIN - executable directory
- HPC_HYPHY_BIN - executable directory