HTSeq¶
HTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays. While the main purpose of HTSeq is to allow you to write your own analysis scripts, customized to your needs, there are also a couple of stand-alone scripts for common tasks that can be used without any Python knowledge. See the Scripts section in the overview documentation for what is available.
Environment Modules¶
Run module spider HTSeq to find out what environment modules are available for this application.
System Variables¶
- HPC_HTSEQ_DIR - installation directory
- HPC_HTSEQ_BIN - executable directory