GSNP¶
As the development of the second generation sequencing technology (NGS), research about the genetic variation can be realized by sequencing about the whole genome of an individual or re-sequencing about the target area. Single nucleotide polymorphism (SNP) is the most common form of genetic variation. SNP detection is to find a new polymorphism site and the known polymorphism alleles on the target area.
Environment Modules¶
Run module spider GSNP to find out what environment modules are available for this application.
System Variables¶
- HPC_GSNP_DIR - installation directory
- HPC_GSNP_BIN - executable directory