FastTree¶
FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. FastTree can handle alignments with up to a million of sequences in a reasonable amount of time and memory. For large alignments, FastTree is 100-1,000 times faster than PhyML 3.0 or RAxML 7.
Environment Modules¶
Run module spider FastTree to find out what environment modules are available for this application.
System Variables¶
- HPC_FASTTREE_DIR - installation directory
- HPC_FASTTREE_BIN - executable directory