CrossMap¶
CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)).
Environment Modules¶
Run module spider CrossMap to find out what environment modules are available for this application.
System Variables¶
- HPC_CROSSMAP_DIR - installation directory
- HPC_CROSSMAP_BIN - executable directory