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CellProfiler

CellProfiler website

CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.

Environment Modules

Run module spider CellProfiler to find out what environment modules are available for this application.

System Variables

  • HPC_CELLPROFILER_DIR - installation directory
  • HPC_CELLPROFILER_BIN - executable directory