CASAVA¶
Creates genomic builds, calls SNPs, detects indels, and counts reads from data generated from one or more sequencing runs.
Environment Modules¶
Run module spider CASAVA to find out what environment modules are available for this application.
System Variables¶
- HPC_CASAVA_DIR - installation directory
- HPC_CASAVA_BIN - executable directory
- HPC_CASAVA_DOC - documentation directory