2021-10-25 09:32:38.253 | DEBUG | trand.main:setup_logging:284 - Logging level set to : 10 2021-10-25 09:32:38.254 | DEBUG | trand.main:cli:291 - Args: Namespace(infiles=['/nfshome/adalena.nanni/mclab/SHARE/McIntyre_Lab/useful_dmel_data/flybase617/flybase_files/dmel-all-r6.17.gtf.gz'], outdir='/nfshome/adalena.nanni/mclab/SHARE/McIntyre_Lab/useful_dmel_data/flybase617/TranD_gene_dmel617', log_file='/nfshome/adalena.nanni/mclab/SHARE/McIntyre_Lab/useful_dmel_data/flybase617/TranD_gene_dmel617/TranD_gene_dmel617.log', consolidate=False, consol_prefix='tr', complexity_only=False, ea_mode='gene', keep_ir=True, out_pairs='both', name1='d1', name2='d2', cpu_cores=8, force=True, skip_plots=False, skip_interm=False, verbose=False, debug=True) 2021-10-25 09:32:38.254 | DEBUG | trand.io:prepare_outdir:22 - Output directory: /nfshome/adalena.nanni/mclab/SHARE/McIntyre_Lab/useful_dmel_data/flybase617/TranD_gene_dmel617 2021-10-25 09:32:38.254 | DEBUG | trand.main:cli:297 - Single file gene analysis 2021-10-25 09:32:38.254 | INFO | trand.event_analysis:process_single_file:1043 - Input file: /nfshome/adalena.nanni/mclab/SHARE/McIntyre_Lab/useful_dmel_data/flybase617/flybase_files/dmel-all-r6.17.gtf.gz 2021-10-25 09:32:43.084 | DEBUG | trand.io:read_exon_data_from_file:117 - Exon data rows: 187164 2021-10-25 09:32:43.119 | INFO | trand.io:read_exon_data_from_file:122 - No missing values in data 2021-10-25 09:32:43.968 | INFO | trand.event_analysis:process_single_file:1063 - Found 17481 genes and 34520 transcripts 2021-10-25 09:32:47.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000003: ['FBtr0081624'] 2021-10-25 09:32:47.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000003 has a single transcript. 2021-10-25 09:32:47.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000008: ['FBtr0071764', 'FBtr0100521', 'FBtr0071763', 'FBtr0342981'] 2021-10-25 09:32:47.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024811: ['FBtr0089112', 'FBtr0089113', 'FBtr0089114', 'FBtr0345064', 'FBtr0345065', 'FBtr0308256', 'FBtr0304871'] 2021-10-25 09:32:47.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031700: ['FBtr0079080', 'FBtr0343227'] 2021-10-25 09:32:47.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035142: ['FBtr0072551', 'FBtr0072552', 'FBtr0331786'] 2021-10-25 09:32:47.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22137026, 22137999), (22137208, 22137999), (22138251, 22151653), (22138251, 22162904), (22151695, 22162904), (22163694, 22164776), (22164989, 22169243), (22170717, 22170777), (22171259, 22172081), (22171985, 22172081), (22172252, 22172315), (22172433, 22172496)] 2021-10-25 09:32:47.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:47.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5328189, 5328252), (5328379, 5328569)] 2021-10-25 09:32:47.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:47.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:47.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:47.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038412: ['FBtr0083266'] 2021-10-25 09:32:47.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038412 has a single transcript. 2021-10-25 09:32:47.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038414: ['FBtr0083269'] 2021-10-25 09:32:47.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038414 has a single transcript. 2021-10-25 09:32:47.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038415: ['FBtr0273219'] 2021-10-25 09:32:47.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038415 has a single transcript. 2021-10-25 09:32:47.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038416: ['FBtr0083271'] 2021-10-25 09:32:47.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038416 has a single transcript. 2021-10-25 09:32:48.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038418: ['FBtr0301514'] 2021-10-25 09:32:48.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038418 has a single transcript. 2021-10-25 09:32:48.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038419: ['FBtr0083325', 'FBtr0083326', 'FBtr0334733', 'FBtr0345255'] 2021-10-25 09:32:48.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051469: ['FBtr0082844'] 2021-10-25 09:32:48.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051469 has a single transcript. 2021-10-25 09:32:48.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(210362, 210437), (210486, 210581), (210486, 210557), (210675, 211638), (210680, 211853), (210680, 211589), (210680, 212627), (211794, 211853), (211982, 212114), (211982, 212627), (212274, 212627), (212729, 212790)] 2021-10-25 09:32:48.025 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (210223, 210486, 'FBtr0089113_exon_1') contains intron (210362, 210437) 2021-10-25 09:32:48.026 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (210223, 210486, 'FBtr0089114_exon_1') contains intron (210362, 210437) 2021-10-25 09:32:48.027 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (210223, 210486, 'FBtr0345064_exon_1') contains intron (210362, 210437) 2021-10-25 09:32:48.028 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (210223, 210486, 'FBtr0308256_exon_1') contains intron (210362, 210437) 2021-10-25 09:32:48.028 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (210223, 210486, 'FBtr0304871_exon_1') contains intron (210362, 210437) 2021-10-25 09:32:48.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089113_exon_1', 'FBtr0089114_exon_1', 'FBtr0345064_exon_1', 'FBtr0308256_exon_1', 'FBtr0304871_exon_1'] 2021-10-25 09:32:48.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031701: ['FBtr0079073', 'FBtr0307036'] 2021-10-25 09:32:48.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(543277, 547481), (546198, 547481), (548067, 569526), (569450, 569526), (569816, 569878), (570199, 570262), (571014, 571079), (571673, 571741), (571971, 572077), (572545, 573055), (573990, 574057), (574368, 574465)] 2021-10-25 09:32:48.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051471: ['FBtr0083794'] 2021-10-25 09:32:48.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051471 has a single transcript. 2021-10-25 09:32:48.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051472: ['FBtr0081747', 'FBtr0081748'] 2021-10-25 09:32:48.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259164: ['FBtr0299610'] 2021-10-25 09:32:48.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259164 has a single transcript. 2021-10-25 09:32:48.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5329912, 5329968)] 2021-10-25 09:32:48.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259166: ['FBtr0299614', 'FBtr0299615'] 2021-10-25 09:32:48.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265496: ['FBtr0339943'] 2021-10-25 09:32:48.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265496 has a single transcript. 2021-10-25 09:32:48.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265497: ['FBtr0339944'] 2021-10-25 09:32:48.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265497 has a single transcript. 2021-10-25 09:32:48.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7810668, 7810729), (7810789, 7810856)] 2021-10-25 09:32:48.093 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7810531, 7810789, 'FBtr0081748_exon_1') contains intron (7810668, 7810729) 2021-10-25 09:32:48.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081748_exon_1'] 2021-10-25 09:32:48.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265498: ['FBtr0339952'] 2021-10-25 09:32:48.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265498 has a single transcript. 2021-10-25 09:32:48.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265499: ['FBtr0339963', 'FBtr0347284'] 2021-10-25 09:32:48.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16345946, 16347055), (16345998, 16347055), (16347280, 16347373), (16347528, 16348780)] 2021-10-25 09:32:48.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16346132, 16347528, 'FBtr0083325_exon_2') contains intron (16347280, 16347373) 2021-10-25 09:32:48.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16347055, 16347528, 'FBtr0334733_exon_2') contains intron (16347280, 16347373) 2021-10-25 09:32:48.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16347055, 16347528, 'FBtr0345255_exon_2') contains intron (16347280, 16347373) 2021-10-25 09:32:48.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083325_exon_2', 'FBtr0334733_exon_2', 'FBtr0345255_exon_2'] 2021-10-25 09:32:48.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14228439, 14228503), (14229237, 14229298), (14230628, 14230691), (14231241, 14231650), (14232166, 14232740), (14233040, 14233104), (14233263, 14233420), (14233559, 14233771)] 2021-10-25 09:32:48.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14170187, 14170703), (14170187, 14170248)] 2021-10-25 09:32:48.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000014: ['FBtr0083388', 'FBtr0083387', 'FBtr0300485', 'FBtr0306337'] 2021-10-25 09:32:48.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035143: ['FBtr0072553'] 2021-10-25 09:32:48.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035143 has a single transcript. 2021-10-25 09:32:48.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051473: ['FBtr0081749'] 2021-10-25 09:32:48.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051473 has a single transcript. 2021-10-25 09:32:48.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031702: ['FBtr0079078', 'FBtr0079079', 'FBtr0307037', 'FBtr0307038', 'FBtr0307039', 'FBtr0343226'] 2021-10-25 09:32:48.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035144: ['FBtr0072563'] 2021-10-25 09:32:48.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035144 has a single transcript. 2021-10-25 09:32:48.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051475: ['FBtr0083735', 'FBtr0332539'] 2021-10-25 09:32:48.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035145: ['FBtr0072554', 'FBtr0344912'] 2021-10-25 09:32:48.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259167: ['FBtr0299616', 'FBtr0299617'] 2021-10-25 09:32:48.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265500: ['FBtr0339989'] 2021-10-25 09:32:48.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265500 has a single transcript. 2021-10-25 09:32:48.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19180876, 19189350), (19181116, 19189350), (19190576, 19200021), (19200706, 19200777)] 2021-10-25 09:32:48.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265508: ['FBtr0340008', 'FBtr0340009'] 2021-10-25 09:32:48.227 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(593503, 593565), (593660, 593725), (594291, 594353), (594845, 594915), (594851, 594915), (595283, 595341), (595576, 595634), (596270, 596326), (596631, 596687)] 2021-10-25 09:32:48.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16810061, 16810131), (16810355, 16822421), (16822469, 16826050), (16826307, 16827134), (16827637, 16827738), (16827897, 16828920)] 2021-10-25 09:32:48.246 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16827134, 16828105, 'FBtr0083388_exon_1') contains intron (16827637, 16827738) 2021-10-25 09:32:48.246 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16827134, 16827897, 'FBtr0300485_exon_2') contains intron (16827637, 16827738) 2021-10-25 09:32:48.247 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16827134, 16827897, 'FBtr0306337_exon_2') contains intron (16827637, 16827738) 2021-10-25 09:32:48.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083388_exon_1', 'FBtr0300485_exon_2', 'FBtr0306337_exon_2'] 2021-10-25 09:32:48.247 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5803423, 5804219), (5805413, 5805472)] 2021-10-25 09:32:48.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038420: ['FBtr0083324', 'FBtr0345202'] 2021-10-25 09:32:48.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15227112, 15227167), (15227338, 15227412), (15227338, 15227405), (15228465, 15229627), (15229627, 15229690), (15230224, 15230307), (15230246, 15230307), (15231628, 15231690)] 2021-10-25 09:32:48.261 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15227405, 15229627, 'FBtr0340008_exon_3') contains intron (15228465, 15229627) 2021-10-25 09:32:48.262 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15230307, 15232665, 'FBtr0340008_exon_5') contains intron (15231628, 15231690) 2021-10-25 09:32:48.262 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15229627, 15230224, 'FBtr0340009_exon_4') contains intron (15229627, 15229690) 2021-10-25 09:32:48.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340008_exon_3', 'FBtr0340008_exon_5', 'FBtr0340009_exon_4'] 2021-10-25 09:32:48.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051477: ['FBtr0082180', 'FBtr0113408', 'FBtr0333823'] 2021-10-25 09:32:48.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16351230, 16351877), (16352031, 16352088), (16352359, 16356799)] 2021-10-25 09:32:48.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5331199, 5331262), (5331446, 5331507), (5331660, 5331721), (5332850, 5335716), (5332850, 5335458), (5332850, 5337840), (5332850, 5337750), (5332850, 5335612), (5332850, 5335663)] 2021-10-25 09:32:48.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024814: ['FBtr0074830', 'FBtr0300813', 'FBtr0301126', 'FBtr0332771'] 2021-10-25 09:32:48.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035146: ['FBtr0072562'] 2021-10-25 09:32:48.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035146 has a single transcript. 2021-10-25 09:32:48.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259168: ['FBtr0300508', 'FBtr0300509', 'FBtr0300510', 'FBtr0299619', 'FBtr0342786'] 2021-10-25 09:32:48.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035147: ['FBtr0072556', 'FBtr0306917'] 2021-10-25 09:32:48.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265509: ['FBtr0340010'] 2021-10-25 09:32:48.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265509 has a single transcript. 2021-10-25 09:32:48.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265510: ['FBtr0344759', 'FBtr0344760'] 2021-10-25 09:32:48.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10121805, 10121871), (10121946, 10122004)] 2021-10-25 09:32:48.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10121772, 10121946, 'FBtr0082180_exon_1') contains intron (10121805, 10121871) 2021-10-25 09:32:48.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10121772, 10121946, 'FBtr0113408_exon_1') contains intron (10121805, 10121871) 2021-10-25 09:32:48.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082180_exon_1', 'FBtr0113408_exon_1'] 2021-10-25 09:32:48.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(649051, 649178), (649419, 650232), (650523, 650583)] 2021-10-25 09:32:48.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038421: ['FBtr0083323', 'FBtr0332177', 'FBtr0392900', 'FBtr0345208'] 2021-10-25 09:32:48.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15691402, 15691462)] 2021-10-25 09:32:48.373 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15691053, 15693887, 'FBtr0344760_exon_1') contains intron (15691402, 15691462) 2021-10-25 09:32:48.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344760_exon_1'] 2021-10-25 09:32:48.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20241106, 20242784), (20241684, 20242784), (20242667, 20242784)] 2021-10-25 09:32:48.391 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20242505, 20243735, 'FBtr0301126_exon_1') contains intron (20242667, 20242784) 2021-10-25 09:32:48.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301126_exon_1'] 2021-10-25 09:32:48.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000015: ['FBtr0083381', 'FBtr0083382', 'FBtr0083383', 'FBtr0083384', 'FBtr0083385', 'FBtr0330709', 'FBtr0346764', 'FBtr0415463', 'FBtr0415464', 'FBtr0415465'] 2021-10-25 09:32:48.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035148: ['FBtr0072559'] 2021-10-25 09:32:48.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035148 has a single transcript. 2021-10-25 09:32:48.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035149: ['FBtr0072558'] 2021-10-25 09:32:48.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035149 has a single transcript. 2021-10-25 09:32:48.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035150: ['FBtr0072557'] 2021-10-25 09:32:48.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035150 has a single transcript. 2021-10-25 09:32:48.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035151: ['FBtr0072612', 'FBtr0072613', 'FBtr0072614'] 2021-10-25 09:32:48.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17864545, 17868981), (17868166, 17868981), (17868369, 17868981), (17869816, 17869892), (17870179, 17870254), (17870422, 17870485), (17870657, 17872618), (17872753, 17873254), (17873400, 17874404), (17873400, 17877420), (17878516, 17886403)] 2021-10-25 09:32:48.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265511: ['FBtr0340012'] 2021-10-25 09:32:48.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265511 has a single transcript. 2021-10-25 09:32:48.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265512: ['FBtr0088369', 'FBtr0088370', 'FBtr0331945'] 2021-10-25 09:32:48.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051480: ['FBtr0083975'] 2021-10-25 09:32:48.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051480 has a single transcript. 2021-10-25 09:32:48.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051481: ['FBtr0089276', 'FBtr0089277', 'FBtr0089278', 'FBtr0089279'] 2021-10-25 09:32:48.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16358033, 16358244), (16358611, 16358682), (16358788, 16359134)] 2021-10-25 09:32:48.470 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16357534, 16358611, 'FBtr0345208_exon_3') contains intron (16358033, 16358244) 2021-10-25 09:32:48.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345208_exon_3'] 2021-10-25 09:32:48.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(679827, 679896), (679995, 680173), (680104, 680173)] 2021-10-25 09:32:48.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (679896, 680326, 'FBtr0072613_exon_1') contains intron (679995, 680173) 2021-10-25 09:32:48.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072613_exon_1'] 2021-10-25 09:32:48.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:48.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024833: ['FBtr0082114'] 2021-10-25 09:32:48.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024833 has a single transcript. 2021-10-25 09:32:48.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031703: ['FBtr0079077'] 2021-10-25 09:32:48.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031703 has a single transcript. 2021-10-25 09:32:48.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6708655, 6709615), (6710373, 6710600), (6710773, 6710829), (6710961, 6711503), (6711618, 6711792), (6711935, 6739549), (6711935, 6727217), (6711950, 6727217), (6711950, 6739549), (6727232, 6739549), (6740174, 6741167)] 2021-10-25 09:32:48.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024836: ['FBtr0088214', 'FBtr0300578', 'FBtr0303223', 'FBtr0304899', 'FBtr0304900', 'FBtr0330601', 'FBtr0339463'] 2021-10-25 09:32:48.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031707: ['FBtr0079094', 'FBtr0329966'] 2021-10-25 09:32:48.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038422: ['FBtr0083321', 'FBtr0083320'] 2021-10-25 09:32:48.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:48.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035152: ['FBtr0072611', 'FBtr0333377', 'FBtr0333378', 'FBtr0333379'] 2021-10-25 09:32:48.621 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079094': ['FBtr0329966']} 2021-10-25 09:32:48.621 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329966']] 2021-10-25 09:32:48.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031708: ['FBtr0079130'] 2021-10-25 09:32:48.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031708 has a single transcript. 2021-10-25 09:32:48.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265523: ['FBtr0333765', 'FBtr0333766', 'FBtr0333767', 'FBtr0333768'] 2021-10-25 09:32:48.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031710: ['FBtr0079129'] 2021-10-25 09:32:48.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031710 has a single transcript. 2021-10-25 09:32:48.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031711: ['FBtr0079096', 'FBtr0343257'] 2021-10-25 09:32:48.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16361935, 16362001), (16362123, 16362180), (16362445, 16365516), (16365666, 16367859), (16365674, 16367859)] 2021-10-25 09:32:48.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16929580, 16929637), (16929852, 16931115), (16931317, 16931401), (16931613, 16935926), (16931613, 16932370), (16936104, 16943252), (16943299, 16943781), (16943299, 16971758), (16943299, 16959971), (16943299, 16963158)] 2021-10-25 09:32:48.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259170: ['FBtr0300511', 'FBtr0300512', 'FBtr0299632', 'FBtr0299633', 'FBtr0300513', 'FBtr0300514', 'FBtr0300515', 'FBtr0300516', 'FBtr0331759'] 2021-10-25 09:32:48.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:48.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.704 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083383': ['FBtr0330709', 'FBtr0346764']} 2021-10-25 09:32:48.704 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330709', 'FBtr0346764']] 2021-10-25 09:32:48.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(681310, 681372), (681786, 681856), (682193, 682362), (682193, 682273)] 2021-10-25 09:32:48.726 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12689211, 12689290), (12690038, 12690091), (12690228, 12690292), (12693425, 12710309), (12710719, 12710797), (12711212, 12711378), (12713314, 12713660), (12715269, 12730933), (12715287, 12730933), (12731818, 12742318), (12731906, 12742318), (12732400, 12741448), (12741641, 12742318), (12741641, 12741866)] 2021-10-25 09:32:48.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038423: ['FBtr0300677', 'FBtr0300678'] 2021-10-25 09:32:48.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051482: ['FBtr0081679'] 2021-10-25 09:32:48.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051482 has a single transcript. 2021-10-25 09:32:48.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10673969, 10691364), (10691393, 10706307), (10708021, 10708121), (10715448, 10715544), (10717401, 10718308), (10717401, 10717964), (10717401, 10719799), (10718315, 10718835), (10718315, 10719799), (10718900, 10719799)] 2021-10-25 09:32:48.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051485: ['FBtr0081662'] 2021-10-25 09:32:48.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051485 has a single transcript. 2021-10-25 09:32:48.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031713: ['FBtr0079128'] 2021-10-25 09:32:48.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031713 has a single transcript. 2021-10-25 09:32:48.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051491: ['FBtr0081610'] 2021-10-25 09:32:48.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051491 has a single transcript. 2021-10-25 09:32:48.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031715: ['FBtr0079127'] 2021-10-25 09:32:48.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031715 has a single transcript. 2021-10-25 09:32:48.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051493: ['FBtr0081566', 'FBtr0303649'] 2021-10-25 09:32:48.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16369676, 16369816), (16369944, 16370002)] 2021-10-25 09:32:48.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.781 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0303223': ['FBtr0330601']} 2021-10-25 09:32:48.782 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330601']] 2021-10-25 09:32:48.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031716: ['FBtr0079126'] 2021-10-25 09:32:48.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031716 has a single transcript. 2021-10-25 09:32:48.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031717: ['FBtr0079101', 'FBtr0079102', 'FBtr0307060', 'FBtr0307061', 'FBtr0307062', 'FBtr0307063', 'FBtr0307064', 'FBtr0331675'] 2021-10-25 09:32:48.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7131755, 7131825), (7131910, 7132055), (7132008, 7132069)] 2021-10-25 09:32:48.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038424: ['FBtr0083286'] 2021-10-25 09:32:48.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038424 has a single transcript. 2021-10-25 09:32:48.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038425: ['FBtr0083287', 'FBtr0083288'] 2021-10-25 09:32:48.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035153: ['FBtr0072610'] 2021-10-25 09:32:48.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035153 has a single transcript. 2021-10-25 09:32:48.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051494: ['FBtr0081565'] 2021-10-25 09:32:48.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051494 has a single transcript. 2021-10-25 09:32:48.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035154: ['FBtr0072609'] 2021-10-25 09:32:48.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035154 has a single transcript. 2021-10-25 09:32:48.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10267357, 10276454), (10277702, 10277760), (10278022, 10278091), (10278230, 10278292), (10278517, 10278578), (10279191, 10307892), (10279191, 10286448), (10279191, 10323565), (10287080, 10289874), (10324318, 10325813), (10324318, 10325790), (10324318, 10325632), (10324356, 10325675), (10324356, 10325783), (10324541, 10325813)] 2021-10-25 09:32:48.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265524: ['FBtr0340058'] 2021-10-25 09:32:48.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265524 has a single transcript. 2021-10-25 09:32:48.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051495: ['FBtr0082882', 'FBtr0344765'] 2021-10-25 09:32:48.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035155: ['FBtr0072577', 'FBtr0330078'] 2021-10-25 09:32:48.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265525: ['FBtr0340074'] 2021-10-25 09:32:48.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265525 has a single transcript. 2021-10-25 09:32:48.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265526: ['FBtr0340075'] 2021-10-25 09:32:48.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265526 has a single transcript. 2021-10-25 09:32:48.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16435073, 16435133), (16435301, 16435355), (16435567, 16435655)] 2021-10-25 09:32:48.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16435355, 16436066, 'FBtr0083288_exon_3') contains intron (16435567, 16435655) 2021-10-25 09:32:48.923 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083288_exon_3'] 2021-10-25 09:32:48.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265527: ['FBtr0340076'] 2021-10-25 09:32:48.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265527 has a single transcript. 2021-10-25 09:32:48.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265529: ['FBtr0340078', 'FBtr0340079'] 2021-10-25 09:32:48.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(690799, 690948)] 2021-10-25 09:32:48.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:48.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.953 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072577': ['FBtr0330078']} 2021-10-25 09:32:48.953 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330078']] 2021-10-25 09:32:48.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035157: ['FBtr0072606'] 2021-10-25 09:32:48.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035157 has a single transcript. 2021-10-25 09:32:48.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035158: ['FBtr0072605', 'FBtr0331771'] 2021-10-25 09:32:48.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5547105, 5547232), (5547412, 5547725), (5547412, 5547807), (5547756, 5547807), (5547912, 5547972), (5548100, 5548167), (5548709, 5549016), (5548709, 5549443), (5549076, 5549135), (5549076, 5549443), (5549081, 5549443), (5549218, 5549443)] 2021-10-25 09:32:48.971 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5547289, 5547912, 'FBtr0079102_exon_1') contains intron (5547412, 5547725) 2021-10-25 09:32:48.972 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5548167, 5549279, 'FBtr0307062_exon_5') contains intron (5548709, 5549016) 2021-10-25 09:32:48.972 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5549016, 5549419, 'FBtr0307063_exon_5') contains intron (5549076, 5549135) 2021-10-25 09:32:48.973 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5547289, 5547756, 'FBtr0307064_exon_1') contains intron (5547412, 5547725) 2021-10-25 09:32:48.973 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079102_exon_1', 'FBtr0307062_exon_5', 'FBtr0307063_exon_5', 'FBtr0307064_exon_1'] 2021-10-25 09:32:48.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:48.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038426: ['FBtr0083316'] 2021-10-25 09:32:48.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038426 has a single transcript. 2021-10-25 09:32:48.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16812439, 16812520), (16812443, 16812520)] 2021-10-25 09:32:48.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:48.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038427: ['FBtr0083315', 'FBtr0100643', 'FBtr0337017'] 2021-10-25 09:32:49.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(707622, 707678), (707622, 707889), (707699, 707889), (708003, 708070)] 2021-10-25 09:32:49.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024841: ['FBtr0085458'] 2021-10-25 09:32:49.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024841 has a single transcript. 2021-10-25 09:32:49.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051496: ['FBtr0081582'] 2021-10-25 09:32:49.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051496 has a single transcript. 2021-10-25 09:32:49.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024846: ['FBtr0080534'] 2021-10-25 09:32:49.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024846 has a single transcript. 2021-10-25 09:32:49.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051497: ['FBtr0083317'] 2021-10-25 09:32:49.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051497 has a single transcript. 2021-10-25 09:32:49.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024887: ['FBtr0078181'] 2021-10-25 09:32:49.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024887 has a single transcript. 2021-10-25 09:32:49.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051501: ['FBtr0081583'] 2021-10-25 09:32:49.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051501 has a single transcript. 2021-10-25 09:32:49.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024889: ['FBtr0074881'] 2021-10-25 09:32:49.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024889 has a single transcript. 2021-10-25 09:32:49.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051506: ['FBtr0083943'] 2021-10-25 09:32:49.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051506 has a single transcript. 2021-10-25 09:32:49.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024897: ['FBtr0070272'] 2021-10-25 09:32:49.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000017: ['FBtr0075357', 'FBtr0112790', 'FBtr0330130', 'FBtr0330131', 'FBtr0330132', 'FBtr0330133', 'FBtr0330134', 'FBtr0330135', 'FBtr0330136', 'FBtr0345369'] 2021-10-25 09:32:49.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024897 has a single transcript. 2021-10-25 09:32:49.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051510: ['FBtr0084783'] 2021-10-25 09:32:49.049 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051510 has a single transcript. 2021-10-25 09:32:49.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051514: ['FBtr0304109'] 2021-10-25 09:32:49.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051514 has a single transcript. 2021-10-25 09:32:49.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024909: ['FBtr0081756', 'FBtr0114520'] 2021-10-25 09:32:49.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265530: ['FBtr0340080'] 2021-10-25 09:32:49.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265530 has a single transcript. 2021-10-25 09:32:49.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051515: ['FBtr0304565'] 2021-10-25 09:32:49.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051515 has a single transcript. 2021-10-25 09:32:49.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035159: ['FBtr0072602', 'FBtr0331770', 'FBtr0290220'] 2021-10-25 09:32:49.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051516: ['FBtr0078987'] 2021-10-25 09:32:49.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265531: ['FBtr0340110'] 2021-10-25 09:32:49.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051516 has a single transcript. 2021-10-25 09:32:49.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265531 has a single transcript. 2021-10-25 09:32:49.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051518: ['FBtr0083545'] 2021-10-25 09:32:49.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051518 has a single transcript. 2021-10-25 09:32:49.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265532: ['FBtr0340111'] 2021-10-25 09:32:49.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265532 has a single transcript. 2021-10-25 09:32:49.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265533: ['FBtr0340113', 'FBtr0340112'] 2021-10-25 09:32:49.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16437338, 16437792), (16437338, 16438064), (16437999, 16438064), (16438650, 16438711), (16439173, 16439240), (16439173, 16439612), (16439357, 16439612), (16440403, 16440464), (16440551, 16440607), (16440750, 16440807), (16440956, 16441019), (16441159, 16441212)] 2021-10-25 09:32:49.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051522: ['FBtr0078941', 'FBtr0078942', 'FBtr0078939', 'FBtr0306343', 'FBtr0306344', 'FBtr0335431', 'FBtr0335432'] 2021-10-25 09:32:49.107 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7907497, 7907561), (7907819, 7907883)] 2021-10-25 09:32:49.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.132 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15796717, 15796790)] 2021-10-25 09:32:49.133 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15796476, 15796897, 'FBtr0340112_exon_1') contains intron (15796717, 15796790) 2021-10-25 09:32:49.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340112_exon_1'] 2021-10-25 09:32:49.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(711687, 711744), (711687, 711746)] 2021-10-25 09:32:49.143 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (710819, 711819, 'FBtr0072602_exon_1') contains intron (711687, 711744) 2021-10-25 09:32:49.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072602_exon_1'] 2021-10-25 09:32:49.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024912: ['FBtr0081697', 'FBtr0347362'] 2021-10-25 09:32:49.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265534: ['FBtr0340117', 'FBtr0340118'] 2021-10-25 09:32:49.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038428: ['FBtr0083314', 'FBtr0337016'] 2021-10-25 09:32:49.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15807695, 15807765)] 2021-10-25 09:32:49.225 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15807452, 15807949, 'FBtr0340118_exon_1') contains intron (15807695, 15807765) 2021-10-25 09:32:49.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340118_exon_1'] 2021-10-25 09:32:49.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:49.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.250 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16442348, 16442402)] 2021-10-25 09:32:49.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035160: ['FBtr0072601', 'FBtr0331769'] 2021-10-25 09:32:49.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265535: ['FBtr0340119'] 2021-10-25 09:32:49.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265535 has a single transcript. 2021-10-25 09:32:49.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4443055, 4443901), (4444057, 4444111), (4444248, 4444321), (4444427, 4444505), (4444562, 4445331), (4444562, 4446165), (4445415, 4446165), (4445415, 4446424), (4446246, 4446424), (4446532, 4446739), (4446822, 4447700), (4447954, 4450471), (4447954, 4453191), (4447954, 4450709), (4447954, 4462626), (4447954, 4462619)] 2021-10-25 09:32:49.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265536: ['FBtr0340128'] 2021-10-25 09:32:49.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265536 has a single transcript. 2021-10-25 09:32:49.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16623288, 16623636), (16625274, 16626272), (16625274, 16626527), (16626616, 16626742), (16626863, 16626921), (16627192, 16627501), (16628088, 16628173), (16628589, 16628662), (16629206, 16646809), (16629206, 16631376), (16631430, 16646809)] 2021-10-25 09:32:49.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16622369, 16625274, 'FBtr0075357_exon_8') contains intron (16623288, 16623636) 2021-10-25 09:32:49.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16615865, 16625274, 'FBtr0112790_exon_9') contains intron (16623288, 16623636) 2021-10-25 09:32:49.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16622369, 16625274, 'FBtr0330130_exon_8') contains intron (16623288, 16623636) 2021-10-25 09:32:49.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16622369, 16625274, 'FBtr0330133_exon_9') contains intron (16623288, 16623636) 2021-10-25 09:32:49.285 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16622369, 16625274, 'FBtr0330136_exon_9') contains intron (16623288, 16623636) 2021-10-25 09:32:49.286 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16615865, 16625274, 'FBtr0345369_exon_8') contains intron (16623288, 16623636) 2021-10-25 09:32:49.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075357_exon_8', 'FBtr0112790_exon_9', 'FBtr0330130_exon_8', 'FBtr0330133_exon_9', 'FBtr0330136_exon_9', 'FBtr0345369_exon_8'] 2021-10-25 09:32:49.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265537: ['FBtr0340129'] 2021-10-25 09:32:49.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265537 has a single transcript. 2021-10-25 09:32:49.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024913: ['FBtr0089209'] 2021-10-25 09:32:49.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024913 has a single transcript. 2021-10-25 09:32:49.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265538: ['FBtr0445674'] 2021-10-25 09:32:49.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265538 has a single transcript. 2021-10-25 09:32:49.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(738732, 738987), (738732, 755375)] 2021-10-25 09:32:49.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024920: ['FBtr0077679', 'FBtr0343784'] 2021-10-25 09:32:49.305 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.305 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031718: ['FBtr0114511'] 2021-10-25 09:32:49.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038429: ['FBtr0083289', 'FBtr0337015'] 2021-10-25 09:32:49.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031718 has a single transcript. 2021-10-25 09:32:49.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265539: ['FBtr0340130'] 2021-10-25 09:32:49.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265539 has a single transcript. 2021-10-25 09:32:49.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259171: ['FBtr0333524', 'FBtr0333525', 'FBtr0299635', 'FBtr0330395'] 2021-10-25 09:32:49.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031719: ['FBtr0079103'] 2021-10-25 09:32:49.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031719 has a single transcript. 2021-10-25 09:32:49.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265540: ['FBtr0340132', 'FBtr0344891'] 2021-10-25 09:32:49.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031720: ['FBtr0079121'] 2021-10-25 09:32:49.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031720 has a single transcript. 2021-10-25 09:32:49.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031721: ['FBtr0079104'] 2021-10-25 09:32:49.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031721 has a single transcript. 2021-10-25 09:32:49.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031722: ['FBtr0079118', 'FBtr0079119', 'FBtr0079120'] 2021-10-25 09:32:49.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16443377, 16443427)] 2021-10-25 09:32:49.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:49.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035161: ['FBtr0072599'] 2021-10-25 09:32:49.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035161 has a single transcript. 2021-10-25 09:32:49.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17025287, 17025352), (17026444, 17026512), (17026475, 17026533)] 2021-10-25 09:32:49.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035162: ['FBtr0072597', 'FBtr0331404'] 2021-10-25 09:32:49.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024921: ['FBtr0077000', 'FBtr0077001', 'FBtr0077002', 'FBtr0333059'] 2021-10-25 09:32:49.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5580902, 5580965), (5580905, 5580965), (5580910, 5580965)] 2021-10-25 09:32:49.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038431: ['FBtr0110773'] 2021-10-25 09:32:49.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038431 has a single transcript. 2021-10-25 09:32:49.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(826885, 826945), (827001, 827181), (827236, 827422), (827469, 827645), (827697, 827876), (829851, 830033), (830341, 830907), (830341, 830621), (830728, 830907), (831242, 831315), (831790, 832041), (832407, 832714), (832975, 833259)] 2021-10-25 09:32:49.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12792963, 12793576), (12794012, 12794094), (12794390, 12794457), (12794584, 12806897), (12807005, 12807076), (12807228, 12812169), (12812495, 12829709), (12832340, 12886600), (12832340, 12868227), (12886669, 12896717)] 2021-10-25 09:32:49.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038432: ['FBtr0083291'] 2021-10-25 09:32:49.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038432 has a single transcript. 2021-10-25 09:32:49.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265541: ['FBtr0340134', 'FBtr0345518'] 2021-10-25 09:32:49.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038435: ['FBtr0110962', 'FBtr0110963'] 2021-10-25 09:32:49.458 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0299635': ['FBtr0330395']} 2021-10-25 09:32:49.458 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330395']] 2021-10-25 09:32:49.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:49.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.496 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16472755, 16473358), (16473031, 16473358)] 2021-10-25 09:32:49.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035164: ['FBtr0072596', 'FBtr0331403'] 2021-10-25 09:32:49.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6193543, 6194047), (6193622, 6194044), (6193622, 6194047), (6193847, 6194044), (6194150, 6194217), (6194889, 6194972), (6196085, 6196142), (6196313, 6196382), (6196554, 6196615), (6196711, 6197036), (6197112, 6197382), (6197557, 6197613)] 2021-10-25 09:32:49.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265542: ['FBtr0340174'] 2021-10-25 09:32:49.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265542 has a single transcript. 2021-10-25 09:32:49.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(837511, 837747)] 2021-10-25 09:32:49.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038436: ['FBtr0083294'] 2021-10-25 09:32:49.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038436 has a single transcript. 2021-10-25 09:32:49.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265543: ['FBtr0340175'] 2021-10-25 09:32:49.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265543 has a single transcript. 2021-10-25 09:32:49.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031723: ['FBtr0079117', 'FBtr0345749'] 2021-10-25 09:32:49.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038437: ['FBtr0083308'] 2021-10-25 09:32:49.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038437 has a single transcript. 2021-10-25 09:32:49.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259173: ['FBtr0299640', 'FBtr0299641', 'FBtr0333374', 'FBtr0333375'] 2021-10-25 09:32:49.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265544: ['FBtr0340179'] 2021-10-25 09:32:49.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265544 has a single transcript. 2021-10-25 09:32:49.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038438: ['FBtr0083307'] 2021-10-25 09:32:49.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038438 has a single transcript. 2021-10-25 09:32:49.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265545: ['FBtr0340180'] 2021-10-25 09:32:49.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265545 has a single transcript. 2021-10-25 09:32:49.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038439: ['FBtr0301702'] 2021-10-25 09:32:49.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038439 has a single transcript. 2021-10-25 09:32:49.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265546: ['FBtr0340181'] 2021-10-25 09:32:49.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265546 has a single transcript. 2021-10-25 09:32:49.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038440: ['FBtr0089695'] 2021-10-25 09:32:49.584 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038440 has a single transcript. 2021-10-25 09:32:49.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265547: ['FBtr0340184'] 2021-10-25 09:32:49.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265547 has a single transcript. 2021-10-25 09:32:49.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038445: ['FBtr0083301'] 2021-10-25 09:32:49.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038445 has a single transcript. 2021-10-25 09:32:49.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265548: ['FBtr0340185'] 2021-10-25 09:32:49.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265548 has a single transcript. 2021-10-25 09:32:49.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265549: ['FBtr0340186'] 2021-10-25 09:32:49.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265549 has a single transcript. 2021-10-25 09:32:49.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5587913, 5587970)] 2021-10-25 09:32:49.599 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.600 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038446: ['FBtr0083303'] 2021-10-25 09:32:49.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038446 has a single transcript. 2021-10-25 09:32:49.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265550: ['FBtr0340193'] 2021-10-25 09:32:49.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265550 has a single transcript. 2021-10-25 09:32:49.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051523: ['FBtr0078935', 'FBtr0078936', 'FBtr0078937', 'FBtr0078938', 'FBtr0345142', 'FBtr0335429', 'FBtr0335430'] 2021-10-25 09:32:49.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038447: ['FBtr0083327'] 2021-10-25 09:32:49.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038447 has a single transcript. 2021-10-25 09:32:49.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265551: ['FBtr0340194'] 2021-10-25 09:32:49.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265551 has a single transcript. 2021-10-25 09:32:49.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038448: ['FBtr0331687', 'FBtr0331688'] 2021-10-25 09:32:49.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265574: ['FBtr0072569', 'FBtr0300727'] 2021-10-25 09:32:49.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035165: ['FBtr0072583', 'FBtr0072584', 'FBtr0304797', 'FBtr0345588'] 2021-10-25 09:32:49.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7143988, 7144059), (7144006, 7144059), (7144281, 7144736), (7144400, 7144736), (7144908, 7144962), (7145172, 7145230), (7145528, 7145590), (7145900, 7145966), (7147864, 7155935)] 2021-10-25 09:32:49.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.654 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(359185, 359244), (360689, 360748), (361014, 361083)] 2021-10-25 09:32:49.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.665 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16611584, 16611648), (16612054, 16612124), (16612269, 16612326), (16612863, 16612925), (16613250, 16613308), (16613263, 16613308)] 2021-10-25 09:32:49.666 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.666 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031724: ['FBtr0079109'] 2021-10-25 09:32:49.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031724 has a single transcript. 2021-10-25 09:32:49.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031725: ['FBtr0343246', 'FBtr0302933'] 2021-10-25 09:32:49.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024941: ['FBtr0074350', 'FBtr0307538'] 2021-10-25 09:32:49.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265575: ['FBtr0340203', 'FBtr0340204', 'FBtr0340205', 'FBtr0340206'] 2021-10-25 09:32:49.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(837945, 838048), (838624, 839102), (838624, 839249)] 2021-10-25 09:32:49.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (837860, 838624, 'FBtr0072584_exon_1') contains intron (837945, 838048) 2021-10-25 09:32:49.719 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (837860, 838624, 'FBtr0345588_exon_1') contains intron (837945, 838048) 2021-10-25 09:32:49.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072584_exon_1', 'FBtr0345588_exon_1'] 2021-10-25 09:32:49.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038449: ['FBtr0083329'] 2021-10-25 09:32:49.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038449 has a single transcript. 2021-10-25 09:32:49.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5603173, 5603908), (5604001, 5604590), (5604644, 5604715), (5604868, 5605841), (5605979, 5606038), (5606167, 5608790), (5608949, 5611027), (5611089, 5611143), (5611289, 5612885), (5612983, 5613373), (5613586, 5617654)] 2021-10-25 09:32:49.727 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038450: ['FBtr0083330'] 2021-10-25 09:32:49.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038450 has a single transcript. 2021-10-25 09:32:49.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038451: ['FBtr0300865'] 2021-10-25 09:32:49.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038451 has a single transcript. 2021-10-25 09:32:49.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038452: ['FBtr0083357'] 2021-10-25 09:32:49.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038452 has a single transcript. 2021-10-25 09:32:49.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16841426, 16841557), (16841683, 16841756), (16841870, 16841936), (16842223, 16842332), (16842516, 16842580), (16842828, 16843150)] 2021-10-25 09:32:49.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038453: ['FBtr0083336', 'FBtr0333728'] 2021-10-25 09:32:49.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000018: ['FBtr0080168'] 2021-10-25 09:32:49.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000018 has a single transcript. 2021-10-25 09:32:49.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4466843, 4467293), (4467572, 4467631), (4467768, 4467843), (4468006, 4468065), (4468146, 4468213), (4468404, 4468463), (4468599, 4471113), (4468599, 4479061), (4468599, 4475251), (4468599, 4472840), (4468599, 4478632), (4473188, 4478632)] 2021-10-25 09:32:49.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000022: ['FBtr0070072'] 2021-10-25 09:32:49.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000022 has a single transcript. 2021-10-25 09:32:49.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031726: ['FBtr0343243', 'FBtr0343244'] 2021-10-25 09:32:49.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000024: ['FBtr0082780', 'FBtr0300486', 'FBtr0335223'] 2021-10-25 09:32:49.802 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3865013, 3865069), (3865298, 3865357), (3865439, 3866502), (3865439, 3866511), (3865439, 3867938), (3865439, 3869516), (3869602, 3869658), (3869814, 3871870)] 2021-10-25 09:32:49.803 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.806 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16643908, 16644017), (16644383, 16644547)] 2021-10-25 09:32:49.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024943: ['FBtr0071235'] 2021-10-25 09:32:49.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024943 has a single transcript. 2021-10-25 09:32:49.831 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5622044, 5622635), (5623198, 5623254)] 2021-10-25 09:32:49.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259174: ['FBtr0299642', 'FBtr0299645', 'FBtr0299646', 'FBtr0299647', 'FBtr0299648', 'FBtr0300519', 'FBtr0300520', 'FBtr0331843', 'FBtr0331844'] 2021-10-25 09:32:49.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024944: ['FBtr0083933', 'FBtr0083934', 'FBtr0110936', 'FBtr0346759', 'FBtr0330712', 'FBtr0330713'] 2021-10-25 09:32:49.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035166: ['FBtr0300712', 'FBtr0331402'] 2021-10-25 09:32:49.866 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13223378, 13232678), (13229770, 13232678), (13232842, 13232960), (13233124, 13237128), (13237278, 13238056), (13238199, 13243218), (13243426, 13243585), (13244131, 13244260), (13244399, 13245809), (13246654, 13258302), (13258425, 13259452)] 2021-10-25 09:32:49.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038454: ['FBtr0083356'] 2021-10-25 09:32:49.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038454 has a single transcript. 2021-10-25 09:32:49.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038455: ['FBtr0083354'] 2021-10-25 09:32:49.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038455 has a single transcript. 2021-10-25 09:32:49.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038458: ['FBtr0083366'] 2021-10-25 09:32:49.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038458 has a single transcript. 2021-10-25 09:32:49.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031728: ['FBtr0079110', 'FBtr0079111', 'FBtr0079112'] 2021-10-25 09:32:49.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038460: ['FBtr0083377', 'FBtr0346338', 'FBtr0337065'] 2021-10-25 09:32:49.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(840969, 841041), (840990, 841041)] 2021-10-25 09:32:49.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5662981, 5668817), (5662981, 5668942), (5662981, 5668748), (5668881, 5668942)] 2021-10-25 09:32:49.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265576: ['FBtr0340215'] 2021-10-25 09:32:49.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265576 has a single transcript. 2021-10-25 09:32:49.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265577: ['FBtr0340272'] 2021-10-25 09:32:49.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265577 has a single transcript. 2021-10-25 09:32:49.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16984095, 16984570), (16984617, 16987528), (16984617, 16986126), (16984617, 16986534)] 2021-10-25 09:32:49.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:49.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265578: ['FBtr0340235'] 2021-10-25 09:32:49.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:49.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265578 has a single transcript. 2021-10-25 09:32:49.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265579: ['FBtr0340238'] 2021-10-25 09:32:49.970 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265579 has a single transcript. 2021-10-25 09:32:49.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035167: ['FBtr0072585', 'FBtr0344991', 'FBtr0331401'] 2021-10-25 09:32:49.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265580: ['FBtr0340245'] 2021-10-25 09:32:49.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265580 has a single transcript. 2021-10-25 09:32:49.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265581: ['FBtr0340236'] 2021-10-25 09:32:49.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265581 has a single transcript. 2021-10-25 09:32:49.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000028: ['FBtr0074015', 'FBtr0100326', 'FBtr0100328', 'FBtr0290063', 'FBtr0290064', 'FBtr0305189', 'FBtr0305190', 'FBtr0305191', 'FBtr0305192', 'FBtr0305193', 'FBtr0305194', 'FBtr0305195', 'FBtr0305196'] 2021-10-25 09:32:49.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265582: ['FBtr0340249'] 2021-10-25 09:32:49.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265582 has a single transcript. 2021-10-25 09:32:49.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265583: ['FBtr0340255'] 2021-10-25 09:32:49.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265583 has a single transcript. 2021-10-25 09:32:50.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265584: ['FBtr0340256', 'FBtr0344799'] 2021-10-25 09:32:50.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20691107, 20698334), (20693848, 20698334), (20698857, 20700094), (20700331, 20700593), (20700885, 20705960), (20700885, 20713318), (20706386, 20713318), (20713750, 20714479)] 2021-10-25 09:32:50.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.033 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083933': ['FBtr0330712'], 'FBtr0110936': ['FBtr0346759', 'FBtr0330713']} 2021-10-25 09:32:50.033 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330712'], ['FBtr0346759', 'FBtr0330713']] 2021-10-25 09:32:50.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17530422, 17530808), (17531035, 17538661), (17533648, 17534350), (17533849, 17534350), (17534562, 17538661), (17538744, 17538813), (17538895, 17539455), (17539494, 17539566), (17539727, 17540690), (17539736, 17540687), (17539736, 17540690), (17540838, 17540901), (17541026, 17541300), (17541026, 17541309), (17541403, 17541675), (17541403, 17542199), (17541403, 17543504), (17541966, 17543504), (17542384, 17542550), (17542384, 17542589), (17542812, 17543504), (17542812, 17543095), (17542812, 17542890), (17542962, 17543504), (17543152, 17543504), (17543612, 17543763), (17544001, 17544059), (17544184, 17544255), (17544397, 17544460), (17544617, 17544676), (17544970, 17545034), (17545433, 17545507)] 2021-10-25 09:32:50.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(841862, 841922), (842114, 842163), (842354, 842410), (842358, 842410), (842577, 842633), (842756, 842813), (842968, 843019), (843272, 843330)] 2021-10-25 09:32:50.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:50.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031729: ['FBtr0305128', 'FBtr0343385', 'FBtr0302949'] 2021-10-25 09:32:50.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038461: ['FBtr0083376', 'FBtr0337064'] 2021-10-25 09:32:50.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051524: ['FBtr0085684', 'FBtr0110860'] 2021-10-25 09:32:50.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265585: ['FBtr0340253'] 2021-10-25 09:32:50.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265585 has a single transcript. 2021-10-25 09:32:50.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265586: ['FBtr0340252'] 2021-10-25 09:32:50.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265586 has a single transcript. 2021-10-25 09:32:50.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16990838, 16990900), (16991057, 16991183), (16991592, 16991733)] 2021-10-25 09:32:50.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30512502, 30512563), (30512729, 30512790), (30513440, 30513499), (30513699, 30513753), (30513904, 30513959), (30513904, 30513956), (30514099, 30514152)] 2021-10-25 09:32:50.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.133 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5678725, 5678782), (5678729, 5678782)] 2021-10-25 09:32:50.134 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5678581, 5679499, 'FBtr0343385_exon_1') contains intron (5678725, 5678782) 2021-10-25 09:32:50.135 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343385_exon_1'] 2021-10-25 09:32:50.135 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024945: ['FBtr0072483'] 2021-10-25 09:32:50.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265587: ['FBtr0340257'] 2021-10-25 09:32:50.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024945 has a single transcript. 2021-10-25 09:32:50.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265587 has a single transcript. 2021-10-25 09:32:50.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265588: ['FBtr0340264', 'FBtr0345754', 'FBtr0347027'] 2021-10-25 09:32:50.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024947: ['FBtr0077680', 'FBtr0077682', 'FBtr0077683', 'FBtr0332459', 'FBtr0332460'] 2021-10-25 09:32:50.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035168: ['FBtr0072586', 'FBtr0332752'] 2021-10-25 09:32:50.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038462: ['FBtr0083375', 'FBtr0337063'] 2021-10-25 09:32:50.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051525: ['FBtr0078924'] 2021-10-25 09:32:50.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051525 has a single transcript. 2021-10-25 09:32:50.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:50.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051526: ['FBtr0445669'] 2021-10-25 09:32:50.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051526 has a single transcript. 2021-10-25 09:32:50.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051528: ['FBtr0078923'] 2021-10-25 09:32:50.220 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051528 has a single transcript. 2021-10-25 09:32:50.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051533: ['FBtr0082905'] 2021-10-25 09:32:50.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051533 has a single transcript. 2021-10-25 09:32:50.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(844683, 844740), (844914, 844967), (845375, 845440), (846266, 846325), (847260, 847318), (847451, 847513), (847667, 847724), (848411, 848475), (849135, 849188), (849321, 849379), (850368, 850433), (850761, 850824)] 2021-10-25 09:32:50.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051538: ['FBtr0078819'] 2021-10-25 09:32:50.235 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051538 has a single transcript. 2021-10-25 09:32:50.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16995059, 16995121), (16995278, 16995404), (16995813, 16995925)] 2021-10-25 09:32:50.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051542: ['FBtr0078786', 'FBtr0332159'] 2021-10-25 09:32:50.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031730: ['FBtr0343387', 'FBtr0343388', 'FBtr0343389', 'FBtr0302950'] 2021-10-25 09:32:50.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2881320, 2881381), (2882511, 2882691), (2882833, 2885632), (2882833, 2884992), (2882833, 2882919)] 2021-10-25 09:32:50.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2882691, 2883126, 'FBtr0077682_exon_1') contains intron (2882833, 2882919) 2021-10-25 09:32:50.285 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2881381, 2882833, 'FBtr0332460_exon_2') contains intron (2882511, 2882691) 2021-10-25 09:32:50.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077682_exon_1', 'FBtr0332460_exon_2'] 2021-10-25 09:32:50.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035169: ['FBtr0072587'] 2021-10-25 09:32:50.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035169 has a single transcript. 2021-10-25 09:32:50.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038463: ['FBtr0083370'] 2021-10-25 09:32:50.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038463 has a single transcript. 2021-10-25 09:32:50.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5369595, 5369654), (5370423, 5370485), (5371376, 5371434), (5371501, 5371724)] 2021-10-25 09:32:50.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035170: ['FBtr0072594'] 2021-10-25 09:32:50.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035170 has a single transcript. 2021-10-25 09:32:50.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265589: ['FBtr0340275'] 2021-10-25 09:32:50.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265589 has a single transcript. 2021-10-25 09:32:50.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038465: ['FBtr0083371', 'FBtr0337060'] 2021-10-25 09:32:50.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265590: ['FBtr0340282'] 2021-10-25 09:32:50.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035171: ['FBtr0300345', 'FBtr0304699', 'FBtr0339892'] 2021-10-25 09:32:50.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265590 has a single transcript. 2021-10-25 09:32:50.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265591: ['FBtr0340284'] 2021-10-25 09:32:50.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265591 has a single transcript. 2021-10-25 09:32:50.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15351958, 15352333), (15353167, 15353224), (15353382, 15354226), (15353388, 15354226), (15354458, 15354535), (15354676, 15354754), (15354932, 15371511), (15354953, 15371511), (15371688, 15378188), (15371688, 15372151), (15371688, 15377560), (15372208, 15378188), (15372208, 15377560), (15377593, 15378188)] 2021-10-25 09:32:50.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265592: ['FBtr0340285'] 2021-10-25 09:32:50.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265592 has a single transcript. 2021-10-25 09:32:50.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265593: ['FBtr0340334'] 2021-10-25 09:32:50.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265593 has a single transcript. 2021-10-25 09:32:50.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17003151, 17004203), (17004300, 17004467), (17004801, 17004865), (17005052, 17005169), (17005351, 17005423), (17005989, 17006104), (17006276, 17006333), (17006501, 17006575), (17006693, 17006749), (17006912, 17007082)] 2021-10-25 09:32:50.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265594: ['FBtr0340330'] 2021-10-25 09:32:50.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265594 has a single transcript. 2021-10-25 09:32:50.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051546: ['FBtr0078737'] 2021-10-25 09:32:50.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051546 has a single transcript. 2021-10-25 09:32:50.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051547: ['FBtr0078764', 'FBtr0078765'] 2021-10-25 09:32:50.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(865403, 866606), (866859, 867941), (868487, 868568), (868758, 869217), (868758, 868935), (869601, 869662), (869866, 869932)] 2021-10-25 09:32:50.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265595: ['FBtr0340335', 'FBtr0340336', 'FBtr0340337', 'FBtr0340338', 'FBtr0340339', 'FBtr0340340'] 2021-10-25 09:32:50.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.367 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5706819, 5712237), (5708567, 5712237), (5710138, 5712237), (5712149, 5712237), (5712424, 5712481), (5713354, 5713415)] 2021-10-25 09:32:50.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038466: ['FBtr0083372', 'FBtr0305271'] 2021-10-25 09:32:50.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5489899, 5489969), (5490243, 5490525), (5490637, 5490701), (5491138, 5491197), (5491439, 5491543), (5492595, 5492653), (5492887, 5493104), (5493489, 5498776), (5498870, 5498942), (5498870, 5502036)] 2021-10-25 09:32:50.411 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259175: ['FBtr0299649', 'FBtr0299650', 'FBtr0299651', 'FBtr0333043'] 2021-10-25 09:32:50.456 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17008375, 17009409), (17008928, 17009409), (17009803, 17009860), (17009905, 17009966), (17010857, 17011459), (17011832, 17011907), (17012248, 17012316)] 2021-10-25 09:32:50.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024956: ['FBtr0088255'] 2021-10-25 09:32:50.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024956 has a single transcript. 2021-10-25 09:32:50.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051548: ['FBtr0078736'] 2021-10-25 09:32:50.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051548 has a single transcript. 2021-10-25 09:32:50.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035173: ['FBtr0072593', 'FBtr0345005'] 2021-10-25 09:32:50.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024957: ['FBtr0082259'] 2021-10-25 09:32:50.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024957 has a single transcript. 2021-10-25 09:32:50.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051549: ['FBtr0078707', 'FBtr0335215'] 2021-10-25 09:32:50.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024958: ['FBtr0084327'] 2021-10-25 09:32:50.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024958 has a single transcript. 2021-10-25 09:32:50.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11222254, 11224988), (11225079, 11225127), (11225217, 11225865), (11226078, 11232651), (11232725, 11236619), (11232725, 11236628), (11236820, 11297310), (11236820, 11246287), (11236820, 11246746), (11246329, 11246746), (11247672, 11290013), (11290263, 11293497), (11297373, 11297841), (11298222, 11302591)] 2021-10-25 09:32:50.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024963: ['FBtr0301378', 'FBtr0301379', 'FBtr0335416', 'FBtr0335417', 'FBtr0335418', 'FBtr0335419', 'FBtr0335420', 'FBtr0335421', 'FBtr0343788', 'FBtr0343789', 'FBtr0343790'] 2021-10-25 09:32:50.507 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11224988, 11225217, 'FBtr0340336_exon_7') contains intron (11225079, 11225127) 2021-10-25 09:32:50.508 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11224285, 11225217, 'FBtr0340337_exon_8') contains intron (11225079, 11225127) 2021-10-25 09:32:50.509 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11219378, 11225217, 'FBtr0340338_exon_7') contains intron (11222254, 11224988) 2021-10-25 09:32:50.510 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11224285, 11225217, 'FBtr0340339_exon_7') contains intron (11225079, 11225127) 2021-10-25 09:32:50.510 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340336_exon_7', 'FBtr0340337_exon_8', 'FBtr0340338_exon_7', 'FBtr0340339_exon_7'] 2021-10-25 09:32:50.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:50.513 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.513 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038467: ['FBtr0083373'] 2021-10-25 09:32:50.513 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038467 has a single transcript. 2021-10-25 09:32:50.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038468: ['FBtr0083389'] 2021-10-25 09:32:50.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038468 has a single transcript. 2021-10-25 09:32:50.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038469: ['FBtr0305130', 'FBtr0337062'] 2021-10-25 09:32:50.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:50.533 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.533 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031731: ['FBtr0343392'] 2021-10-25 09:32:50.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031731 has a single transcript. 2021-10-25 09:32:50.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14673223, 14680198), (14680787, 14744188), (14706878, 14744188), (14706878, 14736042), (14736135, 14739434), (14736135, 14744188), (14740148, 14744188), (14744443, 14744530), (14745307, 14745427), (14745881, 14745954), (14746175, 14746234), (14746404, 14746486), (14746647, 14746707), (14746913, 14746977)] 2021-10-25 09:32:50.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031732: ['FBtr0079168', 'FBtr0079169', 'FBtr0300695', 'FBtr0300696', 'FBtr0332556'] 2021-10-25 09:32:50.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035176: ['FBtr0289973'] 2021-10-25 09:32:50.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035176 has a single transcript. 2021-10-25 09:32:50.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035179: ['FBtr0072619'] 2021-10-25 09:32:50.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035179 has a single transcript. 2021-10-25 09:32:50.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035181: ['FBtr0072621', 'FBtr0072622'] 2021-10-25 09:32:50.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17033906, 17033964), (17034070, 17034133), (17034329, 17034387), (17034727, 17034792)] 2021-10-25 09:32:50.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051550: ['FBtr0078684', 'FBtr0113409', 'FBtr0392903', 'FBtr0336770'] 2021-10-25 09:32:50.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1034885, 1035209), (1035461, 1035559), (1035956, 1036031)] 2021-10-25 09:32:50.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038470: ['FBtr0305129', 'FBtr0339156', 'FBtr0339157'] 2021-10-25 09:32:50.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5718601, 5718655), (5719430, 5719510), (5720027, 5720372), (5720027, 5720774), (5720027, 5720314)] 2021-10-25 09:32:50.665 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5718120, 5719430, 'FBtr0079168_exon_3') contains intron (5718601, 5718655) 2021-10-25 09:32:50.666 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5718120, 5719430, 'FBtr0079169_exon_3') contains intron (5718601, 5718655) 2021-10-25 09:32:50.667 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079168_exon_3', 'FBtr0079169_exon_3'] 2021-10-25 09:32:50.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035186: ['FBtr0072625'] 2021-10-25 09:32:50.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035186 has a single transcript. 2021-10-25 09:32:50.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035187: ['FBtr0072638'] 2021-10-25 09:32:50.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035187 has a single transcript. 2021-10-25 09:32:50.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5486180, 5486234), (5486884, 5487050), (5486884, 5487834), (5486884, 5487059), (5487177, 5487834), (5488307, 5488531), (5489090, 5489143), (5489273, 5489366)] 2021-10-25 09:32:50.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5487050, 5488307, 'FBtr0392903_exon_3') contains intron (5487177, 5487834) 2021-10-25 09:32:50.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0392903_exon_3'] 2021-10-25 09:32:50.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035189: ['FBtr0072635'] 2021-10-25 09:32:50.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035189 has a single transcript. 2021-10-25 09:32:50.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035192: ['FBtr0072651'] 2021-10-25 09:32:50.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035192 has a single transcript. 2021-10-25 09:32:50.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17036876, 17036937), (17037079, 17037142), (17037274, 17037343), (17037440, 17037502), (17037674, 17037730), (17038555, 17038622), (17038970, 17039028), (17039194, 17039259), (17039283, 17039346), (17039286, 17039346), (17039506, 17039573), (17039675, 17039737), (17039684, 17039737), (17039873, 17040005)] 2021-10-25 09:32:50.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035193: ['FBtr0072734'] 2021-10-25 09:32:50.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035193 has a single transcript. 2021-10-25 09:32:50.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259176: ['FBtr0299652', 'FBtr0299656', 'FBtr0299657', 'FBtr0299658', 'FBtr0300521', 'FBtr0300522', 'FBtr0300523', 'FBtr0300524', 'FBtr0339528', 'FBtr0346622'] 2021-10-25 09:32:50.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035194: ['FBtr0072731'] 2021-10-25 09:32:50.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035194 has a single transcript. 2021-10-25 09:32:50.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035196: ['FBtr0072653'] 2021-10-25 09:32:50.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035196 has a single transcript. 2021-10-25 09:32:50.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035197: ['FBtr0072657', 'FBtr0072655'] 2021-10-25 09:32:50.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265596: ['FBtr0340345'] 2021-10-25 09:32:50.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265596 has a single transcript. 2021-10-25 09:32:50.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19731279, 19752528), (19752679, 19753747), (19753860, 19760264), (19753860, 19757814), (19753860, 19756053), (19753860, 19754253), (19754321, 19760264), (19756121, 19760264), (19757885, 19760264), (19760334, 19760394), (19760631, 19760899), (19761034, 19763597), (19763750, 19764248), (19764413, 19764552), (19764413, 19765632), (19764413, 19765644), (19764428, 19765632), (19764428, 19765644), (19765751, 19766489), (19765751, 19766522), (19766647, 19774599), (19766647, 19767525)] 2021-10-25 09:32:50.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:50.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265597: ['FBtr0340350', 'FBtr0340351', 'FBtr0340352', 'FBtr0340353', 'FBtr0340354', 'FBtr0340355'] 2021-10-25 09:32:50.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1253232, 1253303), (1253723, 1254075), (1254324, 1254397), (1255044, 1255487)] 2021-10-25 09:32:50.785 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1254075, 1255044, 'FBtr0072655_exon_3') contains intron (1254324, 1254397) 2021-10-25 09:32:50.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072655_exon_3'] 2021-10-25 09:32:50.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038471: ['FBtr0083391'] 2021-10-25 09:32:50.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038471 has a single transcript. 2021-10-25 09:32:50.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051551: ['FBtr0078706'] 2021-10-25 09:32:50.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051551 has a single transcript. 2021-10-25 09:32:50.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038472: ['FBtr0083428'] 2021-10-25 09:32:50.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038472 has a single transcript. 2021-10-25 09:32:50.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038473: ['FBtr0083426'] 2021-10-25 09:32:50.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038473 has a single transcript. 2021-10-25 09:32:50.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035198: ['FBtr0100646', 'FBtr0100645', 'FBtr0100647'] 2021-10-25 09:32:50.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051559: ['FBtr0078616'] 2021-10-25 09:32:50.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051559 has a single transcript. 2021-10-25 09:32:50.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031733: ['FBtr0079167', 'FBtr0332555'] 2021-10-25 09:32:50.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038474: ['FBtr0089894'] 2021-10-25 09:32:50.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038474 has a single transcript. 2021-10-25 09:32:50.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051560: ['FBtr0078609'] 2021-10-25 09:32:50.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051560 has a single transcript. 2021-10-25 09:32:50.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051561: ['FBtr0078608'] 2021-10-25 09:32:50.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051561 has a single transcript. 2021-10-25 09:32:50.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038475: ['FBtr0083422', 'FBtr0083423', 'FBtr0083424'] 2021-10-25 09:32:50.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051562: ['FBtr0344667'] 2021-10-25 09:32:50.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051562 has a single transcript. 2021-10-25 09:32:50.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051568: ['FBtr0083493'] 2021-10-25 09:32:50.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051568 has a single transcript. 2021-10-25 09:32:50.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051569: ['FBtr0083494'] 2021-10-25 09:32:50.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051569 has a single transcript. 2021-10-25 09:32:50.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000032: ['FBtr0085610', 'FBtr0085609'] 2021-10-25 09:32:50.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051570: ['FBtr0083468'] 2021-10-25 09:32:50.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051570 has a single transcript. 2021-10-25 09:32:50.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051573: ['FBtr0083472'] 2021-10-25 09:32:50.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051573 has a single transcript. 2021-10-25 09:32:50.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:50.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.459 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:50.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051575: ['FBtr0083491'] 2021-10-25 09:32:51.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051575 has a single transcript. 2021-10-25 09:32:51.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051576: ['FBtr0083477'] 2021-10-25 09:32:51.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051576 has a single transcript. 2021-10-25 09:32:51.495 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29991693, 29991753), (29992012, 29992082), (29992772, 29992828), (29992927, 29992985), (29993181, 29993261)] 2021-10-25 09:32:51.497 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29992985, 29993276, 'FBtr0085610_exon_1') contains intron (29993181, 29993261) 2021-10-25 09:32:51.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1253232, 1253303), (1253723, 1254075), (1253993, 1254075), (1254324, 1254397), (1255044, 1255487)] 2021-10-25 09:32:51.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085610_exon_1'] 2021-10-25 09:32:51.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12989239, 13031714), (13031155, 13031714), (13031820, 13032391), (13032916, 13033242), (13034168, 13034239), (13034343, 13046903), (13035208, 13046903), (13047013, 13047861), (13048027, 13068046), (13068266, 13068331), (13068595, 13068658), (13068770, 13068835), (13069028, 13069098), (13069307, 13069421), (13069552, 13069644), (13069826, 13072227), (13070264, 13072227), (13072451, 13072781), (13073082, 13074414), (13073088, 13074414), (13074627, 13074776), (13075367, 13075490)] 2021-10-25 09:32:51.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.499 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1254075, 1255044, 'FBtr0100647_exon_3') contains intron (1254324, 1254397) 2021-10-25 09:32:51.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100647_exon_3'] 2021-10-25 09:32:51.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051577: ['FBtr0083475'] 2021-10-25 09:32:51.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051577 has a single transcript. 2021-10-25 09:32:51.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051578: ['FBtr0083473'] 2021-10-25 09:32:51.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051578 has a single transcript. 2021-10-25 09:32:51.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051579: ['FBtr0083474'] 2021-10-25 09:32:51.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051579 has a single transcript. 2021-10-25 09:32:51.544 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17075116, 17075180), (17075386, 17075502), (17076185, 17076244), (17076502, 17076576), (17076893, 17077817), (17076893, 17079422), (17076893, 17079872)] 2021-10-25 09:32:51.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051580: ['FBtr0083492'] 2021-10-25 09:32:51.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051580 has a single transcript. 2021-10-25 09:32:51.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051583: ['FBtr0081814'] 2021-10-25 09:32:51.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051583 has a single transcript. 2021-10-25 09:32:51.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051588: ['FBtr0082834'] 2021-10-25 09:32:51.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051588 has a single transcript. 2021-10-25 09:32:51.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051591: ['FBtr0083495'] 2021-10-25 09:32:51.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051591 has a single transcript. 2021-10-25 09:32:51.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12458223, 12460588), (12458223, 12477114), (12460760, 12536274), (12477166, 12491688), (12477166, 12516483), (12477166, 12536274), (12477166, 12498524), (12477166, 12504078), (12477166, 12482560), (12492023, 12493425), (12498903, 12504078), (12517185, 12536274), (12537419, 12537634), (12537681, 12537745), (12539486, 12540515), (12540900, 12546409), (12540900, 12545642)] 2021-10-25 09:32:51.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051601: ['FBtr0307507', 'FBtr0308578'] 2021-10-25 09:32:51.578 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12537745, 12540900, 'FBtr0300521_exon_2') contains intron (12539486, 12540515) 2021-10-25 09:32:51.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300521_exon_2'] 2021-10-25 09:32:51.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031734: ['FBtr0079165', 'FBtr0079166'] 2021-10-25 09:32:51.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000036: ['FBtr0084619', 'FBtr0330310', 'FBtr0334916'] 2021-10-25 09:32:51.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22041688, 22042106), (22042347, 22042401), (22043042, 22043101), (22043193, 22043246), (22043283, 22043346), (22043466, 22043536), (22043700, 22043755)] 2021-10-25 09:32:51.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22043536, 22043877, 'FBtr0307507_exon_1') contains intron (22043700, 22043755) 2021-10-25 09:32:51.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307507_exon_1'] 2021-10-25 09:32:51.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035199: ['FBtr0072659', 'FBtr0072660', 'FBtr0072661'] 2021-10-25 09:32:51.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5734340, 5734406), (5734493, 5734557), (5734823, 5735059), (5735246, 5735298), (5735714, 5735770), (5736117, 5736181), (5736275, 5736338), (5736761, 5736820), (5736933, 5740660), (5736938, 5740660), (5741058, 5741216)] 2021-10-25 09:32:51.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24401945, 24403214), (24403510, 24404681), (24404893, 24404968), (24405429, 24407317), (24407498, 24412507), (24412617, 24414846), (24414891, 24421694), (24421904, 24451894), (24452633, 24456434)] 2021-10-25 09:32:51.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038476: ['FBtr0083397', 'FBtr0083398', 'FBtr0305987'] 2021-10-25 09:32:51.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.684 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084619': ['FBtr0330310']} 2021-10-25 09:32:51.685 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330310']] 2021-10-25 09:32:51.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051602: ['FBtr0079693'] 2021-10-25 09:32:51.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051602 has a single transcript. 2021-10-25 09:32:51.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031735: ['FBtr0079136'] 2021-10-25 09:32:51.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031735 has a single transcript. 2021-10-25 09:32:51.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051603: ['FBtr0079690'] 2021-10-25 09:32:51.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051603 has a single transcript. 2021-10-25 09:32:51.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031736: ['FBtr0079135', 'FBtr0332554'] 2021-10-25 09:32:51.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051604: ['FBtr0079694'] 2021-10-25 09:32:51.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051604 has a single transcript. 2021-10-25 09:32:51.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1257360, 1261565), (1262033, 1269070), (1265774, 1266071), (1266211, 1269070), (1269174, 1272964), (1273073, 1273953)] 2021-10-25 09:32:51.709 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1265715, 1266211, 'FBtr0072660_exon_1') contains intron (1265774, 1266071) 2021-10-25 09:32:51.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072660_exon_1'] 2021-10-25 09:32:51.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051606: ['FBtr0079577'] 2021-10-25 09:32:51.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051606 has a single transcript. 2021-10-25 09:32:51.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051609: ['FBtr0299873'] 2021-10-25 09:32:51.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051609 has a single transcript. 2021-10-25 09:32:51.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051611: ['FBtr0085926'] 2021-10-25 09:32:51.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051611 has a single transcript. 2021-10-25 09:32:51.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051612: ['FBtr0085908', 'FBtr0300999'] 2021-10-25 09:32:51.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17080356, 17082663), (17082027, 17082663), (17082507, 17082663)] 2021-10-25 09:32:51.746 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.746 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000037: ['FBtr0072367', 'FBtr0072368'] 2021-10-25 09:32:51.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5725228, 5758694), (5759362, 5759428), (5759616, 5759676)] 2021-10-25 09:32:51.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265598: ['FBtr0340363', 'FBtr0340364', 'FBtr0340365', 'FBtr0340366', 'FBtr0340367'] 2021-10-25 09:32:51.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21762899, 21765962), (21766160, 21772999), (21775446, 21795245), (21775446, 21795393)] 2021-10-25 09:32:51.786 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24381856, 24383189), (24381856, 24383240), (24383377, 24383435), (24383619, 24383923), (24385048, 24389597), (24385048, 24389593)] 2021-10-25 09:32:51.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.798 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031737: ['FBtr0079163', 'FBtr0079164'] 2021-10-25 09:32:51.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035203: ['FBtr0072667'] 2021-10-25 09:32:51.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035203 has a single transcript. 2021-10-25 09:32:51.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051613: ['FBtr0085894'] 2021-10-25 09:32:51.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051613 has a single transcript. 2021-10-25 09:32:51.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035204: ['FBtr0072729', 'FBtr0345006', 'FBtr0331867'] 2021-10-25 09:32:51.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051614: ['FBtr0085895'] 2021-10-25 09:32:51.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051614 has a single transcript. 2021-10-25 09:32:51.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051615: ['FBtr0085890'] 2021-10-25 09:32:51.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051615 has a single transcript. 2021-10-25 09:32:51.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038478: ['FBtr0083400'] 2021-10-25 09:32:51.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038478 has a single transcript. 2021-10-25 09:32:51.866 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5763368, 5765960), (5764271, 5765960)] 2021-10-25 09:32:51.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024973: ['FBtr0070498'] 2021-10-25 09:32:51.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051616: ['FBtr0085889'] 2021-10-25 09:32:51.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051616 has a single transcript. 2021-10-25 09:32:51.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024973 has a single transcript. 2021-10-25 09:32:51.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038479: ['FBtr0083418'] 2021-10-25 09:32:51.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038479 has a single transcript. 2021-10-25 09:32:51.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000038: ['FBtr0073299', 'FBtr0073300'] 2021-10-25 09:32:51.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051617: ['FBtr0085892'] 2021-10-25 09:32:51.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051617 has a single transcript. 2021-10-25 09:32:51.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024975: ['FBtr0070488'] 2021-10-25 09:32:51.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024975 has a single transcript. 2021-10-25 09:32:51.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038481: ['FBtr0083417', 'FBtr0346149'] 2021-10-25 09:32:51.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051618: ['FBtr0085893'] 2021-10-25 09:32:51.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051618 has a single transcript. 2021-10-25 09:32:51.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024980: ['FBtr0070494', 'FBtr0332496'] 2021-10-25 09:32:51.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18515682, 18520717), (18521039, 18566695), (18535075, 18535239), (18535424, 18566695), (18566624, 18566695), (18567138, 18567510), (18567636, 18570563)] 2021-10-25 09:32:51.894 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18534662, 18535424, 'FBtr0340364_exon_1') contains intron (18535075, 18535239) 2021-10-25 09:32:51.896 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18534662, 18535424, 'FBtr0340367_exon_1') contains intron (18535075, 18535239) 2021-10-25 09:32:51.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340364_exon_1', 'FBtr0340367_exon_1'] 2021-10-25 09:32:51.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051619: ['FBtr0110959', 'FBtr0085902', 'FBtr0085901', 'FBtr0339131', 'FBtr0339132', 'FBtr0301000', 'FBtr0307497'] 2021-10-25 09:32:51.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:51.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.917 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0340364': ['FBtr0340367']} 2021-10-25 09:32:51.918 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0340367']] 2021-10-25 09:32:51.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2739232, 2739296), (2739545, 2741422), (2741496, 2741588), (2741831, 2741897), (2741991, 2742560), (2742797, 2743450), (2742797, 2742916)] 2021-10-25 09:32:51.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4429502, 4429565), (4429715, 4432385), (4432522, 4433304), (4433459, 4433614), (4434059, 4434489), (4435089, 4435174)] 2021-10-25 09:32:51.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:51.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:51.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:51.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031738: ['FBtr0301234', 'FBtr0301235', 'FBtr0301236', 'FBtr0332038', 'FBtr0332039'] 2021-10-25 09:32:51.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024983: ['FBtr0070090', 'FBtr0070089', 'FBtr0100475', 'FBtr0100476', 'FBtr0334033'] 2021-10-25 09:32:51.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038482: ['FBtr0303413'] 2021-10-25 09:32:51.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000039: ['FBtr0084639', 'FBtr0084640'] 2021-10-25 09:32:51.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038482 has a single transcript. 2021-10-25 09:32:52.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038484: ['FBtr0083405'] 2021-10-25 09:32:52.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038484 has a single transcript. 2021-10-25 09:32:52.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035205: ['FBtr0072668', 'FBtr0072669'] 2021-10-25 09:32:52.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038485: ['FBtr0083406'] 2021-10-25 09:32:52.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038485 has a single transcript. 2021-10-25 09:32:52.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259178: ['FBtr0299660', 'FBtr0299661', 'FBtr0299662'] 2021-10-25 09:32:52.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038486: ['FBtr0083407'] 2021-10-25 09:32:52.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038486 has a single transcript. 2021-10-25 09:32:52.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038487: ['FBtr0083415'] 2021-10-25 09:32:52.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038487 has a single transcript. 2021-10-25 09:32:52.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038488: ['FBtr0083414', 'FBtr0337043'] 2021-10-25 09:32:52.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24485839, 24485907), (24486200, 24487130), (24487285, 24487422), (24487603, 24488451), (24488611, 24488780), (24489366, 24489598), (24489800, 24490817)] 2021-10-25 09:32:52.043 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24485427, 24486200, 'FBtr0084639_exon_1') contains intron (24485839, 24485907) 2021-10-25 09:32:52.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084639_exon_1'] 2021-10-25 09:32:52.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1307369, 1307625), (1307741, 1307803), (1307902, 1307963), (1308899, 1308956), (1309793, 1309856), (1310314, 1310627)] 2021-10-25 09:32:52.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265605: ['FBtr0087254', 'FBtr0300576'] 2021-10-25 09:32:52.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5769513, 5769573), (5769686, 5769747), (5769944, 5770013), (5770888, 5770950), (5771209, 5787964), (5771209, 5773014), (5771209, 5799117), (5771209, 5772146), (5787984, 5799117), (5799272, 5800043), (5799277, 5800043), (5799411, 5800043)] 2021-10-25 09:32:52.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.068 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21684146, 21684545), (21684339, 21684545), (21684911, 21688473), (21688552, 21700671), (21700782, 21700854), (21701180, 21701763), (21701938, 21704458), (21704603, 21710563), (21710693, 21711080), (21711183, 21711314), (21711410, 21712768), (21711410, 21712789), (21712966, 21713027), (21713308, 21716324), (21717493, 21717560), (21717672, 21719513), (21719643, 21720122), (21719643, 21725067), (21719643, 21720358), (21720481, 21725067), (21720481, 21725085), (21725445, 21728027), (21725445, 21727005), (21727362, 21727422), (21727573, 21728027)] 2021-10-25 09:32:52.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17145864, 17145926), (17146052, 17146119), (17146055, 17146119), (17146663, 17146720), (17147351, 17147414), (17147737, 17148637)] 2021-10-25 09:32:52.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25040875, 25041741), (25040875, 25043225), (25042681, 25043225), (25043465, 25043522), (25043678, 25043734), (25043822, 25043880), (25044053, 25044109), (25044289, 25044525), (25044756, 25044971)] 2021-10-25 09:32:52.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16109274, 16109371), (16109428, 16109626)] 2021-10-25 09:32:52.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(528477, 528544), (528483, 528544), (529351, 529409), (529530, 529631), (529530, 529643), (529858, 530013)] 2021-10-25 09:32:52.116 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (529409, 529849, 'FBtr0070090_exon_1') contains intron (529530, 529631) 2021-10-25 09:32:52.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070090_exon_1'] 2021-10-25 09:32:52.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000042: ['FBtr0070823', 'FBtr0070822', 'FBtr0100662', 'FBtr0100663', 'FBtr0345894'] 2021-10-25 09:32:52.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035206: ['FBtr0072727', 'FBtr0072728'] 2021-10-25 09:32:52.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038490: ['FBtr0083409'] 2021-10-25 09:32:52.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038490 has a single transcript. 2021-10-25 09:32:52.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038491: ['FBtr0083410', 'FBtr0337042'] 2021-10-25 09:32:52.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265606: ['FBtr0083928'] 2021-10-25 09:32:52.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265606 has a single transcript. 2021-10-25 09:32:52.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265607: ['FBtr0303301', 'FBtr0340178'] 2021-10-25 09:32:52.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1312660, 1312719), (1313121, 1313255)] 2021-10-25 09:32:52.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17152494, 17152550)] 2021-10-25 09:32:52.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17131225, 17133482), (17131624, 17133482), (17133816, 17158541), (17158750, 17161860), (17161996, 17169813), (17170076, 17170136), (17170260, 17170328)] 2021-10-25 09:32:52.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259179: ['FBtr0343178', 'FBtr0343179'] 2021-10-25 09:32:52.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038492: ['FBtr0334402', 'FBtr0334403'] 2021-10-25 09:32:52.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031739: ['FBtr0079160', 'FBtr0332037'] 2021-10-25 09:32:52.243 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5901013, 5902689), (5902096, 5902689)] 2021-10-25 09:32:52.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.243 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22821628, 22823019), (22823199, 22823436), (22823583, 22823663), (22823817, 22823872), (22824030, 22824623), (22824744, 22827261), (22825250, 22827261), (22827333, 22827576), (22828116, 22828183), (22828447, 22828508), (22828606, 22828662)] 2021-10-25 09:32:52.244 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.245 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035207: ['FBtr0072670', 'FBtr0072671', 'FBtr0310555'] 2021-10-25 09:32:52.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265608: ['FBtr0340430'] 2021-10-25 09:32:52.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265608 has a single transcript. 2021-10-25 09:32:52.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265609: ['FBtr0340432'] 2021-10-25 09:32:52.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265609 has a single transcript. 2021-10-25 09:32:52.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265610: ['FBtr0340431'] 2021-10-25 09:32:52.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265610 has a single transcript. 2021-10-25 09:32:52.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5800754, 5800847), (5801608, 5801677), (5801608, 5801671)] 2021-10-25 09:32:52.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265611: ['FBtr0340435'] 2021-10-25 09:32:52.280 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5800516, 5801608, 'FBtr0079160_exon_2') contains intron (5800754, 5800847) 2021-10-25 09:32:52.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265611 has a single transcript. 2021-10-25 09:32:52.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079160_exon_2'] 2021-10-25 09:32:52.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265612: ['FBtr0340436'] 2021-10-25 09:32:52.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265612 has a single transcript. 2021-10-25 09:32:52.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17153807, 17153886), (17153807, 17153883), (17159948, 17169874), (17170036, 17180499), (17180541, 17187086), (17187150, 17201942)] 2021-10-25 09:32:52.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265613: ['FBtr0340439'] 2021-10-25 09:32:52.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265613 has a single transcript. 2021-10-25 09:32:52.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259183: ['FBtr0299667'] 2021-10-25 09:32:52.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259183 has a single transcript. 2021-10-25 09:32:52.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265614: ['FBtr0340472'] 2021-10-25 09:32:52.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265614 has a single transcript. 2021-10-25 09:32:52.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024984: ['FBtr0070392', 'FBtr0345608'] 2021-10-25 09:32:52.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265623: ['FBtr0087793', 'FBtr0300387', 'FBtr0330613'] 2021-10-25 09:32:52.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259184: ['FBtr0307217', 'FBtr0299668'] 2021-10-25 09:32:52.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1313908, 1313974), (1314090, 1314157), (1314320, 1314472), (1314335, 1314472), (1314709, 1314885), (1315612, 1315678), (1315940, 1316000), (1316324, 1316384), (1316675, 1316737), (1316675, 1316734), (1317333, 1317390), (1317616, 1317671), (1317785, 1317848)] 2021-10-25 09:32:52.330 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1313695, 1314090, 'FBtr0072671_exon_1') contains intron (1313908, 1313974) 2021-10-25 09:32:52.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072671_exon_1'] 2021-10-25 09:32:52.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031740: ['FBtr0079139'] 2021-10-25 09:32:52.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031740 has a single transcript. 2021-10-25 09:32:52.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14091375, 14091447), (14091571, 14091644), (14091571, 14091635)] 2021-10-25 09:32:52.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038494: ['FBtr0083411', 'FBtr0339173'] 2021-10-25 09:32:52.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:52.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.351 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031741: ['FBtr0344769', 'FBtr0306841', 'FBtr0342609'] 2021-10-25 09:32:52.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12996811, 12999276), (12997212, 12999276), (12999498, 12999798), (13000051, 13000143), (13000384, 13000926), (13004383, 13005764)] 2021-10-25 09:32:52.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051624: ['FBtr0081491', 'FBtr0301928', 'FBtr0343874'] 2021-10-25 09:32:52.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17232905, 17233231), (17233542, 17238898), (17233547, 17238912), (17239046, 17239477), (17239613, 17239692), (17239907, 17247270), (17248105, 17264896)] 2021-10-25 09:32:52.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259185: ['FBtr0299669'] 2021-10-25 09:32:52.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259185 has a single transcript. 2021-10-25 09:32:52.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024985: ['FBtr0070225', 'FBtr0332291', 'FBtr0332292'] 2021-10-25 09:32:52.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259186: ['FBtr0302916'] 2021-10-25 09:32:52.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259186 has a single transcript. 2021-10-25 09:32:52.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5805665, 5806555), (5805665, 5806550), (5806644, 5806700), (5807617, 5807674), (5808411, 5808472), (5808684, 5808744)] 2021-10-25 09:32:52.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259187: ['FBtr0302288'] 2021-10-25 09:32:52.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259187 has a single transcript. 2021-10-25 09:32:52.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259188: ['FBtr0299672'] 2021-10-25 09:32:52.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259188 has a single transcript. 2021-10-25 09:32:52.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000043: ['FBtr0086029'] 2021-10-25 09:32:52.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000043 has a single transcript. 2021-10-25 09:32:52.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259189: ['FBtr0299673'] 2021-10-25 09:32:52.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259189 has a single transcript. 2021-10-25 09:32:52.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21199957, 21200207), (21199957, 21200010), (21199960, 21200207)] 2021-10-25 09:32:52.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000044: ['FBtr0071519'] 2021-10-25 09:32:52.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000044 has a single transcript. 2021-10-25 09:32:52.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035208: ['FBtr0072725', 'FBtr0072726'] 2021-10-25 09:32:52.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259190: ['FBtr0299674'] 2021-10-25 09:32:52.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259190 has a single transcript. 2021-10-25 09:32:52.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038498: ['FBtr0083453', 'FBtr0339170'] 2021-10-25 09:32:52.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000045: ['FBtr0078478', 'FBtr0334090'] 2021-10-25 09:32:52.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259192: ['FBtr0299676'] 2021-10-25 09:32:52.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259192 has a single transcript. 2021-10-25 09:32:52.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265625: ['FBtr0340485'] 2021-10-25 09:32:52.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265625 has a single transcript. 2021-10-25 09:32:52.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259193: ['FBtr0299677'] 2021-10-25 09:32:52.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259193 has a single transcript. 2021-10-25 09:32:52.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265626: ['FBtr0340486'] 2021-10-25 09:32:52.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265626 has a single transcript. 2021-10-25 09:32:52.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259194: ['FBtr0299678'] 2021-10-25 09:32:52.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259194 has a single transcript. 2021-10-25 09:32:52.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1394158, 1394223), (1394714, 1395097), (1394714, 1395082), (1395193, 1395245), (1395371, 1395552)] 2021-10-25 09:32:52.491 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1395245, 1397337, 'FBtr0070225_exon_4') contains intron (1395371, 1395552) 2021-10-25 09:32:52.492 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1395245, 1397337, 'FBtr0332291_exon_4') contains intron (1395371, 1395552) 2021-10-25 09:32:52.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070225_exon_4', 'FBtr0332291_exon_4'] 2021-10-25 09:32:52.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265627: ['FBtr0340487', 'FBtr0342881'] 2021-10-25 09:32:52.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259195: ['FBtr0299679'] 2021-10-25 09:32:52.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259195 has a single transcript. 2021-10-25 09:32:52.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259196: ['FBtr0299680'] 2021-10-25 09:32:52.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259196 has a single transcript. 2021-10-25 09:32:52.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1322450, 1322540), (1322702, 1322751)] 2021-10-25 09:32:52.511 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1321791, 1322702, 'FBtr0072725_exon_2') contains intron (1322450, 1322540) 2021-10-25 09:32:52.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072725_exon_2'] 2021-10-25 09:32:52.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259198: ['FBtr0299682'] 2021-10-25 09:32:52.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259198 has a single transcript. 2021-10-25 09:32:52.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17321123, 17321215), (17321504, 17327232), (17327366, 17331017), (17331153, 17332494), (17332709, 17345398), (17346134, 17365765)] 2021-10-25 09:32:52.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21985248, 21985324), (21986275, 21986637)] 2021-10-25 09:32:52.521 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21985209, 21986275, 'FBtr0334090_exon_1') contains intron (21985248, 21985324) 2021-10-25 09:32:52.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334090_exon_1'] 2021-10-25 09:32:52.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259199: ['FBtr0299683'] 2021-10-25 09:32:52.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259199 has a single transcript. 2021-10-25 09:32:52.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259200: ['FBtr0344666', 'FBtr0299684'] 2021-10-25 09:32:52.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18680073, 18680129), (18681985, 18682046), (18682266, 18682409)] 2021-10-25 09:32:52.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031745: ['FBtr0079158', 'FBtr0342620'] 2021-10-25 09:32:52.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051626: ['FBtr0081485', 'FBtr0081486'] 2021-10-25 09:32:52.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035209: ['FBtr0072678'] 2021-10-25 09:32:52.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035209 has a single transcript. 2021-10-25 09:32:52.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038499: ['FBtr0083452', 'FBtr0302317'] 2021-10-25 09:32:52.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2653657, 2653717), (2653906, 2653969)] 2021-10-25 09:32:52.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035210: ['FBtr0072724'] 2021-10-25 09:32:52.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035210 has a single transcript. 2021-10-25 09:32:52.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000046: ['FBtr0082785', 'FBtr0082786', 'FBtr0346242'] 2021-10-25 09:32:52.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035211: ['FBtr0072723', 'FBtr0331866'] 2021-10-25 09:32:52.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5861179, 5861251), (5861361, 5861424), (5861607, 5870192), (5861607, 5878987), (5870245, 5878987)] 2021-10-25 09:32:52.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024986: ['FBtr0070233'] 2021-10-25 09:32:52.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024986 has a single transcript. 2021-10-25 09:32:52.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024987: ['FBtr0070215', 'FBtr0339772', 'FBtr0339773', 'FBtr0339774'] 2021-10-25 09:32:52.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21233499, 21233634), (21233902, 21236643)] 2021-10-25 09:32:52.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17375780, 17375843), (17376771, 17376826), (17377053, 17377116), (17377266, 17390495), (17390600, 17390659), (17391028, 17391089)] 2021-10-25 09:32:52.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265629: ['FBtr0340490'] 2021-10-25 09:32:52.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265629 has a single transcript. 2021-10-25 09:32:52.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265630: ['FBtr0340488', 'FBtr0340489'] 2021-10-25 09:32:52.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259201: ['FBtr0299686', 'FBtr0299687', 'FBtr0345444'] 2021-10-25 09:32:52.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13426042, 13426582)] 2021-10-25 09:32:52.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1333632, 1333688), (1334456, 1334512), (1334972, 1335040)] 2021-10-25 09:32:52.662 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031746: ['FBtr0079143', 'FBtr0342615'] 2021-10-25 09:32:52.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051627: ['FBtr0300424'] 2021-10-25 09:32:52.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051627 has a single transcript. 2021-10-25 09:32:52.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038504: ['FBtr0083447', 'FBtr0083448', 'FBtr0339531', 'FBtr0339532'] 2021-10-25 09:32:52.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13196510, 13196596), (13196975, 13197037), (13197176, 13197246), (13197733, 13197795), (13198975, 13199047), (13199482, 13199538), (13199945, 13200004), (13200390, 13200466), (13200904, 13202739), (13200904, 13203709), (13203057, 13203709), (13204150, 13206711), (13206829, 13211099)] 2021-10-25 09:32:52.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.693 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051631: ['FBtr0079338'] 2021-10-25 09:32:52.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051631 has a single transcript. 2021-10-25 09:32:52.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051632: ['FBtr0079341', 'FBtr0345446'] 2021-10-25 09:32:52.706 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18813143, 18813297)] 2021-10-25 09:32:52.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.712 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1370663, 1371230), (1371370, 1371450), (1371774, 1371914), (1371774, 1371873), (1372022, 1372085), (1372267, 1372460), (1373047, 1373157)] 2021-10-25 09:32:52.713 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1372460, 1374677, 'FBtr0070215_exon_6') contains intron (1373047, 1373157) 2021-10-25 09:32:52.713 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1372460, 1374677, 'FBtr0339772_exon_6') contains intron (1373047, 1373157) 2021-10-25 09:32:52.713 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1372460, 1375257, 'FBtr0339774_exon_6') contains intron (1373047, 1373157) 2021-10-25 09:32:52.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070215_exon_6', 'FBtr0339772_exon_6', 'FBtr0339774_exon_6'] 2021-10-25 09:32:52.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5886053, 5886118), (5886053, 5886100)] 2021-10-25 09:32:52.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035213: ['FBtr0072721', 'FBtr0072722', 'FBtr0331865'] 2021-10-25 09:32:52.727 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6823059, 6831169), (6831971, 6832151), (6832553, 6833005), (6833187, 6837763)] 2021-10-25 09:32:52.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265631: ['FBtr0340497'] 2021-10-25 09:32:52.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265631 has a single transcript. 2021-10-25 09:32:52.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265632: ['FBtr0340498'] 2021-10-25 09:32:52.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265632 has a single transcript. 2021-10-25 09:32:52.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265633: ['FBtr0340499'] 2021-10-25 09:32:52.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265633 has a single transcript. 2021-10-25 09:32:52.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17398780, 17399018), (17399601, 17401310), (17399601, 17402143)] 2021-10-25 09:32:52.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265634: ['FBtr0340500'] 2021-10-25 09:32:52.781 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265634 has a single transcript. 2021-10-25 09:32:52.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000047: ['FBtr0083143'] 2021-10-25 09:32:52.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000047 has a single transcript. 2021-10-25 09:32:52.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1341861, 1341927), (1342069, 1342371)] 2021-10-25 09:32:52.788 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1341927, 1342371, 'FBtr0072722_exon_1') contains intron (1342069, 1342371) 2021-10-25 09:32:52.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265635: ['FBtr0340501'] 2021-10-25 09:32:52.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265635 has a single transcript. 2021-10-25 09:32:52.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072722_exon_1'] 2021-10-25 09:32:52.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.793 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083447': ['FBtr0339531']} 2021-10-25 09:32:52.793 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0339531']] 2021-10-25 09:32:52.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265636: ['FBtr0340502'] 2021-10-25 09:32:52.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265636 has a single transcript. 2021-10-25 09:32:52.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000052: ['FBtr0079219', 'FBtr0079220', 'FBtr0079221'] 2021-10-25 09:32:52.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265637: ['FBtr0340503'] 2021-10-25 09:32:52.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265637 has a single transcript. 2021-10-25 09:32:52.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031747: ['FBtr0079154', 'FBtr0345750'] 2021-10-25 09:32:52.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265638: ['FBtr0340505'] 2021-10-25 09:32:52.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265638 has a single transcript. 2021-10-25 09:32:52.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051633: ['FBtr0079325'] 2021-10-25 09:32:52.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051633 has a single transcript. 2021-10-25 09:32:52.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265639: ['FBtr0340504'] 2021-10-25 09:32:52.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265639 has a single transcript. 2021-10-25 09:32:52.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265640: ['FBtr0340506'] 2021-10-25 09:32:52.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265640 has a single transcript. 2021-10-25 09:32:52.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051634: ['FBtr0079327'] 2021-10-25 09:32:52.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051634 has a single transcript. 2021-10-25 09:32:52.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259202: ['FBtr0340393', 'FBtr0299688', 'FBtr0299689'] 2021-10-25 09:32:52.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265641: ['FBtr0340507'] 2021-10-25 09:32:52.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265641 has a single transcript. 2021-10-25 09:32:52.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265642: ['FBtr0340509'] 2021-10-25 09:32:52.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265642 has a single transcript. 2021-10-25 09:32:52.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051635: ['FBtr0079326', 'FBtr0331187', 'FBtr0331188', 'FBtr0331189', 'FBtr0331190', 'FBtr0331191', 'FBtr0331192', 'FBtr0113410'] 2021-10-25 09:32:52.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265643: ['FBtr0340508'] 2021-10-25 09:32:52.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265643 has a single transcript. 2021-10-25 09:32:52.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265644: ['FBtr0340510'] 2021-10-25 09:32:52.848 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265644 has a single transcript. 2021-10-25 09:32:52.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265645: ['FBtr0340511'] 2021-10-25 09:32:52.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265645 has a single transcript. 2021-10-25 09:32:52.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5904459, 5904589)] 2021-10-25 09:32:52.859 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265646: ['FBtr0340512'] 2021-10-25 09:32:52.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265646 has a single transcript. 2021-10-25 09:32:52.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265648: ['FBtr0340515'] 2021-10-25 09:32:52.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265648 has a single transcript. 2021-10-25 09:32:52.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6042011, 6042074), (6044351, 6044427), (6045526, 6045920), (6045526, 6045893)] 2021-10-25 09:32:52.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265649: ['FBtr0340514'] 2021-10-25 09:32:52.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265649 has a single transcript. 2021-10-25 09:32:52.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038505: ['FBtr0083437'] 2021-10-25 09:32:52.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038505 has a single transcript. 2021-10-25 09:32:52.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265650: ['FBtr0340516', 'FBtr0340517'] 2021-10-25 09:32:52.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035216: ['FBtr0072692'] 2021-10-25 09:32:52.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024989: ['FBtr0070066', 'FBtr0070067', 'FBtr0070068', 'FBtr0342962', 'FBtr0344149'] 2021-10-25 09:32:52.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035216 has a single transcript. 2021-10-25 09:32:52.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038506: ['FBtr0083438'] 2021-10-25 09:32:52.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038506 has a single transcript. 2021-10-25 09:32:52.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035217: ['FBtr0072693'] 2021-10-25 09:32:52.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035217 has a single transcript. 2021-10-25 09:32:52.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038507: ['FBtr0083439'] 2021-10-25 09:32:52.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038507 has a single transcript. 2021-10-25 09:32:52.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035218: ['FBtr0072720'] 2021-10-25 09:32:52.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035218 has a single transcript. 2021-10-25 09:32:52.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038508: ['FBtr0303755'] 2021-10-25 09:32:52.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038508 has a single transcript. 2021-10-25 09:32:52.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18658648, 18658707), (18658856, 18658919), (18659930, 18659985), (18660124, 18660194), (18660604, 18660664), (18660625, 18661110)] 2021-10-25 09:32:52.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038509: ['FBtr0083446'] 2021-10-25 09:32:52.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038509 has a single transcript. 2021-10-25 09:32:52.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038510: ['FBtr0113244'] 2021-10-25 09:32:52.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038510 has a single transcript. 2021-10-25 09:32:52.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035227: ['FBtr0072703', 'FBtr0072704', 'FBtr0072705', 'FBtr0333401', 'FBtr0333402'] 2021-10-25 09:32:52.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15092128, 15092186), (15092133, 15092186)] 2021-10-25 09:32:52.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038511: ['FBtr0083442'] 2021-10-25 09:32:52.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038511 has a single transcript. 2021-10-25 09:32:52.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031749: ['FBtr0079153'] 2021-10-25 09:32:52.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031749 has a single transcript. 2021-10-25 09:32:52.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038512: ['FBtr0083443'] 2021-10-25 09:32:52.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038512 has a single transcript. 2021-10-25 09:32:52.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038515: ['FBtr0083505', 'FBtr0321266'] 2021-10-25 09:32:52.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031751: ['FBtr0079151', 'FBtr0079152'] 2021-10-25 09:32:52.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265651: ['FBtr0340518'] 2021-10-25 09:32:52.970 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265651 has a single transcript. 2021-10-25 09:32:52.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17533199, 17533259), (17533330, 17533622), (17533941, 17534002), (17534057, 17534118)] 2021-10-25 09:32:52.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17533622, 17534057, 'FBtr0083505_exon_2') contains intron (17533941, 17534002) 2021-10-25 09:32:52.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083505_exon_2'] 2021-10-25 09:32:52.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265652: ['FBtr0340519'] 2021-10-25 09:32:52.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265652 has a single transcript. 2021-10-25 09:32:52.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265653: ['FBtr0340520'] 2021-10-25 09:32:52.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265653 has a single transcript. 2021-10-25 09:32:52.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(279757, 343691), (338909, 339450), (339500, 343691), (343119, 343691), (343145, 343691), (343171, 343691), (343833, 346148), (347707, 348079), (348238, 348646), (349324, 349443)] 2021-10-25 09:32:52.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5923479, 5923538), (5923479, 5923533)] 2021-10-25 09:32:52.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:52.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265654: ['FBtr0340521'] 2021-10-25 09:32:52.991 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:52.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265654 has a single transcript. 2021-10-25 09:32:52.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000053: ['FBtr0079431', 'FBtr0100353', 'FBtr0339663'] 2021-10-25 09:32:52.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265655: ['FBtr0340522'] 2021-10-25 09:32:52.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265655 has a single transcript. 2021-10-25 09:32:53.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265656: ['FBtr0340523'] 2021-10-25 09:32:53.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265656 has a single transcript. 2021-10-25 09:32:53.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265657: ['FBtr0340524'] 2021-10-25 09:32:53.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265657 has a single transcript. 2021-10-25 09:32:53.014 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6635406, 6635652), (6637024, 6637977), (6637024, 6637433), (6637490, 6637977), (6639335, 6639396), (6640203, 6640356), (6640215, 6640356), (6640675, 6640734), (6640934, 6645971), (6646947, 6647950), (6646947, 6649029), (6646947, 6647997), (6646947, 6647920), (6646947, 6647421), (6646947, 6648945)] 2021-10-25 09:32:53.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.016 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265658: ['FBtr0340525'] 2021-10-25 09:32:53.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265658 has a single transcript. 2021-10-25 09:32:53.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259203: ['FBtr0299691', 'FBtr0299692', 'FBtr0299693', 'FBtr0344452'] 2021-10-25 09:32:53.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265659: ['FBtr0340526'] 2021-10-25 09:32:53.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265659 has a single transcript. 2021-10-25 09:32:53.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265660: ['FBtr0340527'] 2021-10-25 09:32:53.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265660 has a single transcript. 2021-10-25 09:32:53.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265661: ['FBtr0340528', 'FBtr0340529'] 2021-10-25 09:32:53.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038516: ['FBtr0083454', 'FBtr0083455', 'FBtr0321264', 'FBtr0321265'] 2021-10-25 09:32:53.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1523856, 1523913), (1523969, 1524026), (1524139, 1524194), (1524357, 1524424), (1524585, 1524640), (1524808, 1524867), (1524965, 1525021), (1525228, 1525284), (1525392, 1525641), (1525392, 1526333), (1525700, 1527189), (1525703, 1527189), (1526398, 1527189), (1526398, 1526659), (1526752, 1527189), (1527381, 1527438), (1527613, 1527673), (1528076, 1529105), (1528076, 1531390), (1529228, 1531390), (1531522, 1531579), (1531988, 1532050), (1532222, 1532282), (1532887, 1532944), (1533433, 1533493), (1533801, 1533856)] 2021-10-25 09:32:53.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7016374, 7016436), (7017486, 7017544), (7017966, 7018148), (7018374, 7018430), (7019080, 7019134), (7019382, 7023528)] 2021-10-25 09:32:53.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031752: ['FBtr0273412', 'FBtr0333231'] 2021-10-25 09:32:53.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18805740, 18806926)] 2021-10-25 09:32:53.073 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18805594, 18807195, 'FBtr0340529_exon_1') contains intron (18805740, 18806926) 2021-10-25 09:32:53.074 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340529_exon_1'] 2021-10-25 09:32:53.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5949611, 5949827), (5949990, 5950124), (5951819, 5951876), (5951997, 5952055), (5952191, 5952251), (5952384, 5952444), (5952627, 5952988), (5952627, 5953415), (5953057, 5953415), (5954477, 5954534)] 2021-10-25 09:32:53.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7329363, 7329428), (7329637, 7329715), (7330239, 7330298), (7331231, 7331296), (7331231, 7331291), (7331336, 7331392), (7331336, 7331404)] 2021-10-25 09:32:53.107 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17534883, 17534952), (17535051, 17536032), (17535851, 17535966), (17535851, 17536032), (17536698, 17536770)] 2021-10-25 09:32:53.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265662: ['FBtr0340531'] 2021-10-25 09:32:53.137 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265662 has a single transcript. 2021-10-25 09:32:53.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265663: ['FBtr0340601'] 2021-10-25 09:32:53.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265663 has a single transcript. 2021-10-25 09:32:53.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265664: ['FBtr0340602'] 2021-10-25 09:32:53.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265664 has a single transcript. 2021-10-25 09:32:53.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031753: ['FBtr0079150'] 2021-10-25 09:32:53.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031753 has a single transcript. 2021-10-25 09:32:53.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265665: ['FBtr0340535', 'FBtr0340536'] 2021-10-25 09:32:53.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031756: ['FBtr0079237', 'FBtr0309288', 'FBtr0303267'] 2021-10-25 09:32:53.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000055: ['FBtr0100589', 'FBtr0100594', 'FBtr0100593', 'FBtr0100591', 'FBtr0100590'] 2021-10-25 09:32:53.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024991: ['FBtr0070481', 'FBtr0070482', 'FBtr0310649'] 2021-10-25 09:32:53.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:53.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5967562, 5967614), (5967562, 5967619), (5967565, 5967614)] 2021-10-25 09:32:53.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259204: ['FBtr0299694', 'FBtr0299695'] 2021-10-25 09:32:53.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2714210, 2714287), (2714237, 2714323), (2714453, 2714510), (2714606, 2714776), (2715280, 2715337), (2715433, 2715513), (2716705, 2716765)] 2021-10-25 09:32:53.265 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2714078, 2714453, 'FBtr0070482_exon_1') contains intron (2714210, 2714287) 2021-10-25 09:32:53.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070482_exon_1'] 2021-10-25 09:32:53.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265666: ['FBtr0340537'] 2021-10-25 09:32:53.272 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265666 has a single transcript. 2021-10-25 09:32:53.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265667: ['FBtr0340538'] 2021-10-25 09:32:53.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265667 has a single transcript. 2021-10-25 09:32:53.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035228: ['FBtr0072831', 'FBtr0333400'] 2021-10-25 09:32:53.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038519: ['FBtr0083503'] 2021-10-25 09:32:53.288 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038519 has a single transcript. 2021-10-25 09:32:53.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14615643, 14616302), (14615643, 14616128), (14616437, 14616502), (14616907, 14616977), (14617643, 14618069), (14618474, 14618525)] 2021-10-25 09:32:53.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265668: ['FBtr0340573'] 2021-10-25 09:32:53.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265668 has a single transcript. 2021-10-25 09:32:53.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7011408, 7011493), (7011756, 7011817)] 2021-10-25 09:32:53.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038523: ['FBtr0083460'] 2021-10-25 09:32:53.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038523 has a single transcript. 2021-10-25 09:32:53.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265669: ['FBtr0340579'] 2021-10-25 09:32:53.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265669 has a single transcript. 2021-10-25 09:32:53.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038524: ['FBtr0083462', 'FBtr0305308'] 2021-10-25 09:32:53.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265670: ['FBtr0340567'] 2021-10-25 09:32:53.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265670 has a single transcript. 2021-10-25 09:32:53.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265671: ['FBtr0340578'] 2021-10-25 09:32:53.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265671 has a single transcript. 2021-10-25 09:32:53.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265672: ['FBtr0340569'] 2021-10-25 09:32:53.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265672 has a single transcript. 2021-10-25 09:32:53.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:53.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265673: ['FBtr0340566'] 2021-10-25 09:32:53.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265673 has a single transcript. 2021-10-25 09:32:53.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265674: ['FBtr0340568'] 2021-10-25 09:32:53.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265674 has a single transcript. 2021-10-25 09:32:53.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031757: ['FBtr0079172'] 2021-10-25 09:32:53.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031757 has a single transcript. 2021-10-25 09:32:53.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17606329, 17606377), (17606329, 17606384), (17606565, 17606626), (17607680, 17607932), (17608058, 17608139)] 2021-10-25 09:32:53.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051636: ['FBtr0079324', 'FBtr0343865'] 2021-10-25 09:32:53.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265675: ['FBtr0340593'] 2021-10-25 09:32:53.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265675 has a single transcript. 2021-10-25 09:32:53.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265676: ['FBtr0340591'] 2021-10-25 09:32:53.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031758: ['FBtr0079173', 'FBtr0079174', 'FBtr0309286'] 2021-10-25 09:32:53.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265676 has a single transcript. 2021-10-25 09:32:53.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265677: ['FBtr0340586'] 2021-10-25 09:32:53.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265677 has a single transcript. 2021-10-25 09:32:53.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259209: ['FBtr0344996', 'FBtr0299696', 'FBtr0299697', 'FBtr0343338'] 2021-10-25 09:32:53.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265678: ['FBtr0340588'] 2021-10-25 09:32:53.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265678 has a single transcript. 2021-10-25 09:32:53.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265679: ['FBtr0340583'] 2021-10-25 09:32:53.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265679 has a single transcript. 2021-10-25 09:32:53.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265680: ['FBtr0340584'] 2021-10-25 09:32:53.386 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265680 has a single transcript. 2021-10-25 09:32:53.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024992: ['FBtr0070502', 'FBtr0345716'] 2021-10-25 09:32:53.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6656933, 6657002), (6657375, 6657433)] 2021-10-25 09:32:53.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265681: ['FBtr0340585'] 2021-10-25 09:32:53.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265681 has a single transcript. 2021-10-25 09:32:53.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035229: ['FBtr0072736', 'FBtr0072737', 'FBtr0072735'] 2021-10-25 09:32:53.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265682: ['FBtr0340582'] 2021-10-25 09:32:53.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265682 has a single transcript. 2021-10-25 09:32:53.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265683: ['FBtr0340548'] 2021-10-25 09:32:53.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265683 has a single transcript. 2021-10-25 09:32:53.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265684: ['FBtr0340559'] 2021-10-25 09:32:53.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265684 has a single transcript. 2021-10-25 09:32:53.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038525: ['FBtr0083463'] 2021-10-25 09:32:53.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038525 has a single transcript. 2021-10-25 09:32:53.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5970559, 5970638), (5970559, 5970628)] 2021-10-25 09:32:53.417 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5969858, 5970651, 'FBtr0079174_exon_1') contains intron (5970559, 5970638) 2021-10-25 09:32:53.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079174_exon_1'] 2021-10-25 09:32:53.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265685: ['FBtr0340556'] 2021-10-25 09:32:53.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265685 has a single transcript. 2021-10-25 09:32:53.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038526: ['FBtr0083465', 'FBtr0345206'] 2021-10-25 09:32:53.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265686: ['FBtr0340555'] 2021-10-25 09:32:53.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265686 has a single transcript. 2021-10-25 09:32:53.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2695225, 2695392), (2695928, 2695987), (2696258, 2696320), (2696857, 2696915), (2697284, 2697338), (2697788, 2697848)] 2021-10-25 09:32:53.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265687: ['FBtr0340564'] 2021-10-25 09:32:53.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265687 has a single transcript. 2021-10-25 09:32:53.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265688: ['FBtr0340561'] 2021-10-25 09:32:53.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265688 has a single transcript. 2021-10-25 09:32:53.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265689: ['FBtr0340562'] 2021-10-25 09:32:53.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265689 has a single transcript. 2021-10-25 09:32:53.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265690: ['FBtr0340570'] 2021-10-25 09:32:53.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265690 has a single transcript. 2021-10-25 09:32:53.456 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24075069, 24075198), (24075337, 24075448), (24075608, 24076180), (24076283, 24076345), (24076442, 24076502), (24076599, 24076653), (24076950, 24077057), (24077378, 24077437)] 2021-10-25 09:32:53.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051637: ['FBtr0079287', 'FBtr0343155'] 2021-10-25 09:32:53.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265691: ['FBtr0340603'] 2021-10-25 09:32:53.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265691 has a single transcript. 2021-10-25 09:32:53.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265692: ['FBtr0340604'] 2021-10-25 09:32:53.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265692 has a single transcript. 2021-10-25 09:32:53.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1537242, 1537523), (1537989, 1538044), (1538154, 1538719), (1539132, 1539195), (1539485, 1539547), (1540628, 1540750), (1540957, 1541655), (1540957, 1541435), (1541833, 1541895), (1542235, 1542298), (1542428, 1542485), (1542736, 1542812), (1542958, 1543024), (1543143, 1543209), (1543592, 1543653)] 2021-10-25 09:32:53.467 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.467 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265693: ['FBtr0340605'] 2021-10-25 09:32:53.477 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265693 has a single transcript. 2021-10-25 09:32:53.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17614015, 17614357)] 2021-10-25 09:32:53.482 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.482 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265694: ['FBtr0340606'] 2021-10-25 09:32:53.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265694 has a single transcript. 2021-10-25 09:32:53.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265695: ['FBtr0340607'] 2021-10-25 09:32:53.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265695 has a single transcript. 2021-10-25 09:32:53.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000056: ['FBtr0006151', 'FBtr0100187', 'FBtr0343699'] 2021-10-25 09:32:53.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265696: ['FBtr0340594'] 2021-10-25 09:32:53.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265696 has a single transcript. 2021-10-25 09:32:53.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265697: ['FBtr0340598'] 2021-10-25 09:32:53.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265697 has a single transcript. 2021-10-25 09:32:53.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6499819, 6525367), (6525550, 6525618), (6525820, 6525882)] 2021-10-25 09:32:53.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265698: ['FBtr0340597'] 2021-10-25 09:32:53.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265698 has a single transcript. 2021-10-25 09:32:53.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265699: ['FBtr0340596'] 2021-10-25 09:32:53.550 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265699 has a single transcript. 2021-10-25 09:32:53.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024993: ['FBtr0070478', 'FBtr0345709'] 2021-10-25 09:32:53.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265700: ['FBtr0340608'] 2021-10-25 09:32:53.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265700 has a single transcript. 2021-10-25 09:32:53.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031759: ['FBtr0079231', 'FBtr0079232', 'FBtr0307069', 'FBtr0307070', 'FBtr0307071', 'FBtr0345336'] 2021-10-25 09:32:53.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265701: ['FBtr0340609'] 2021-10-25 09:32:53.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265701 has a single transcript. 2021-10-25 09:32:53.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265702: ['FBtr0340599'] 2021-10-25 09:32:53.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265702 has a single transcript. 2021-10-25 09:32:53.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038527: ['FBtr0083500'] 2021-10-25 09:32:53.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038527 has a single transcript. 2021-10-25 09:32:53.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265703: ['FBtr0340637'] 2021-10-25 09:32:53.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265703 has a single transcript. 2021-10-25 09:32:53.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265704: ['FBtr0340638'] 2021-10-25 09:32:53.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265704 has a single transcript. 2021-10-25 09:32:53.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038528: ['FBtr0083467'] 2021-10-25 09:32:53.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038528 has a single transcript. 2021-10-25 09:32:53.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038529: ['FBtr0083498'] 2021-10-25 09:32:53.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265705: ['FBtr0340613'] 2021-10-25 09:32:53.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038529 has a single transcript. 2021-10-25 09:32:53.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265705 has a single transcript. 2021-10-25 09:32:53.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265706: ['FBtr0340639'] 2021-10-25 09:32:53.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265706 has a single transcript. 2021-10-25 09:32:53.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038530: ['FBtr0083470'] 2021-10-25 09:32:53.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038530 has a single transcript. 2021-10-25 09:32:53.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265707: ['FBtr0340640'] 2021-10-25 09:32:53.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265707 has a single transcript. 2021-10-25 09:32:53.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14615643, 14616302), (14616437, 14616502), (14616907, 14616977), (14617643, 14618069), (14618474, 14618525)] 2021-10-25 09:32:53.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038531: ['FBtr0289974'] 2021-10-25 09:32:53.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038531 has a single transcript. 2021-10-25 09:32:53.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2698978, 2699043), (2699338, 2699841)] 2021-10-25 09:32:53.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265708: ['FBtr0340642', 'FBtr0340643', 'FBtr0344298'] 2021-10-25 09:32:53.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038532: ['FBtr0083476', 'FBtr0344347', 'FBtr0331346', 'FBtr0331347'] 2021-10-25 09:32:53.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051638: ['FBtr0079262', 'FBtr0113411'] 2021-10-25 09:32:53.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035231: ['FBtr0072742'] 2021-10-25 09:32:53.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035231 has a single transcript. 2021-10-25 09:32:53.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035232: ['FBtr0072828', 'FBtr0072829'] 2021-10-25 09:32:53.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6491375, 6491434), (6491505, 6491567), (6491607, 6491683), (6492204, 6492259), (6492463, 6492519), (6492856, 6494937), (6495104, 6496056), (6495104, 6495243), (6495868, 6496056)] 2021-10-25 09:32:53.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5369428, 5369549), (5369720, 5369783)] 2021-10-25 09:32:53.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5369549, 5370148, 'FBtr0340642_exon_2') contains intron (5369720, 5369783) 2021-10-25 09:32:53.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5369549, 5370312, 'FBtr0340643_exon_1') contains intron (5369720, 5369783) 2021-10-25 09:32:53.674 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340642_exon_2', 'FBtr0340643_exon_1'] 2021-10-25 09:32:53.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259210: ['FBtr0299698', 'FBtr0299699', 'FBtr0299700', 'FBtr0343482'] 2021-10-25 09:32:53.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1556003, 1556062), (1556217, 1556271), (1557714, 1557788), (1558214, 1558322)] 2021-10-25 09:32:53.678 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1557788, 1558484, 'FBtr0072828_exon_1') contains intron (1558214, 1558322) 2021-10-25 09:32:53.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024994: ['FBtr0070501', 'FBtr0273276', 'FBtr0345710'] 2021-10-25 09:32:53.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072828_exon_1'] 2021-10-25 09:32:53.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5992405, 5992469), (5993345, 5993471), (5994886, 5995028), (5996531, 5996713), (5996531, 5999297), (5996531, 5999409), (5996531, 5997682)] 2021-10-25 09:32:53.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17648095, 17660646), (17648095, 17651321), (17651381, 17660646), (17660668, 17660724), (17664642, 17664704), (17664824, 17668482), (17668740, 17668803), (17668995, 17669055), (17669112, 17669182)] 2021-10-25 09:32:53.705 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17669055, 17669217, 'FBtr0083476_exon_7') contains intron (17669112, 17669182) 2021-10-25 09:32:53.706 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17669055, 17669985, 'FBtr0344347_exon_7') contains intron (17669112, 17669182) 2021-10-25 09:32:53.707 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17669055, 17669217, 'FBtr0331346_exon_8') contains intron (17669112, 17669182) 2021-10-25 09:32:53.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083476_exon_7', 'FBtr0344347_exon_7', 'FBtr0331346_exon_8'] 2021-10-25 09:32:53.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000057: ['FBtr0086744', 'FBtr0340288'] 2021-10-25 09:32:53.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051639: ['FBtr0079207', 'FBtr0079208'] 2021-10-25 09:32:53.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2702775, 2703287), (2703407, 2703504)] 2021-10-25 09:32:53.747 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2703287, 2703745, 'FBtr0273276_exon_1') contains intron (2703407, 2703504) 2021-10-25 09:32:53.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273276_exon_1'] 2021-10-25 09:32:53.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035233: ['FBtr0072743', 'FBtr0333397'] 2021-10-25 09:32:53.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24415673, 24415894), (24415960, 24416181), (24416265, 24417121), (24416265, 24416413), (24416265, 24416677), (24416599, 24416677), (24416857, 24416921), (24417062, 24417121), (24417337, 24417430), (24417859, 24418620), (24418874, 24418984), (24419276, 24420303), (24420829, 24421340), (24421497, 24421867), (24422079, 24422908), (24423004, 24423183), (24423371, 24423441), (24423674, 24423733), (24423789, 24425684), (24426001, 24427909)] 2021-10-25 09:32:53.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18152641, 18152707)] 2021-10-25 09:32:53.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6154027, 6154643), (6154882, 6154948), (6154895, 6154948)] 2021-10-25 09:32:53.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265709: ['FBtr0340644'] 2021-10-25 09:32:53.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265709 has a single transcript. 2021-10-25 09:32:53.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1558561, 1558656), (1559104, 1559158)] 2021-10-25 09:32:53.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.790 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265710: ['FBtr0340641'] 2021-10-25 09:32:53.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265710 has a single transcript. 2021-10-25 09:32:53.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265711: ['FBtr0340645'] 2021-10-25 09:32:53.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265711 has a single transcript. 2021-10-25 09:32:53.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265712: ['FBtr0340646'] 2021-10-25 09:32:53.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265712 has a single transcript. 2021-10-25 09:32:53.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000061: ['FBtr0078053'] 2021-10-25 09:32:53.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000061 has a single transcript. 2021-10-25 09:32:53.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265713: ['FBtr0346549'] 2021-10-25 09:32:53.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265713 has a single transcript. 2021-10-25 09:32:53.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265714: ['FBtr0340657'] 2021-10-25 09:32:53.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265714 has a single transcript. 2021-10-25 09:32:53.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000063: ['FBtr0083478', 'FBtr0331348'] 2021-10-25 09:32:53.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265715: ['FBtr0340648'] 2021-10-25 09:32:53.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265715 has a single transcript. 2021-10-25 09:32:53.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051642: ['FBtr0079199'] 2021-10-25 09:32:53.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051642 has a single transcript. 2021-10-25 09:32:53.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265716: ['FBtr0340649'] 2021-10-25 09:32:53.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265716 has a single transcript. 2021-10-25 09:32:53.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265717: ['FBtr0340681'] 2021-10-25 09:32:53.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265717 has a single transcript. 2021-10-25 09:32:53.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051643: ['FBtr0079182', 'FBtr0343119'] 2021-10-25 09:32:53.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035234: ['FBtr0072744'] 2021-10-25 09:32:53.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035234 has a single transcript. 2021-10-25 09:32:53.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265718: ['FBtr0340659', 'FBtr0340660'] 2021-10-25 09:32:53.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024995: ['FBtr0273279'] 2021-10-25 09:32:53.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024995 has a single transcript. 2021-10-25 09:32:53.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038533: ['FBtr0083490'] 2021-10-25 09:32:53.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038533 has a single transcript. 2021-10-25 09:32:53.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024996: ['FBtr0070479'] 2021-10-25 09:32:53.860 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024996 has a single transcript. 2021-10-25 09:32:53.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035235: ['FBtr0072826', 'FBtr0072827'] 2021-10-25 09:32:53.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024997: ['FBtr0070480'] 2021-10-25 09:32:53.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024997 has a single transcript. 2021-10-25 09:32:53.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038535: ['FBtr0089412', 'FBtr0089413', 'FBtr0089414', 'FBtr0089415', 'FBtr0089416', 'FBtr0089417', 'FBtr0335026', 'FBtr0335027'] 2021-10-25 09:32:53.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024998: ['FBtr0070499'] 2021-10-25 09:32:53.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024998 has a single transcript. 2021-10-25 09:32:53.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17671567, 17671849), (17672857, 17672920), (17673476, 17673576), (17673476, 17673548)] 2021-10-25 09:32:53.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025109: ['FBtr0077643'] 2021-10-25 09:32:53.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025109 has a single transcript. 2021-10-25 09:32:53.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025111: ['FBtr0073425', 'FBtr0073426', 'FBtr0333963'] 2021-10-25 09:32:53.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6039943, 6040007), (6040287, 6040338), (6040613, 6040668), (6040864, 6040923)] 2021-10-25 09:32:53.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7409341, 7409624)] 2021-10-25 09:32:53.900 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7408492, 7409707, 'FBtr0340660_exon_1') contains intron (7409341, 7409624) 2021-10-25 09:32:53.901 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340660_exon_1'] 2021-10-25 09:32:53.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1562997, 1563965), (1564280, 1568417), (1564280, 1568196), (1568309, 1568417)] 2021-10-25 09:32:53.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:53.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259211: ['FBtr0299705', 'FBtr0299706', 'FBtr0299707', 'FBtr0300538', 'FBtr0300539', 'FBtr0300541', 'FBtr0306625', 'FBtr0345791'] 2021-10-25 09:32:53.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051644: ['FBtr0079159', 'FBtr0342621', 'FBtr0342622'] 2021-10-25 09:32:53.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10779695, 10779992), (10780120, 10780196), (10780526, 10786805), (10780526, 10780595)] 2021-10-25 09:32:53.953 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10780196, 10780661, 'FBtr0073425_exon_1') contains intron (10780526, 10780595) 2021-10-25 09:32:53.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073425_exon_1'] 2021-10-25 09:32:53.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:53.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000064: ['FBtr0084994', 'FBtr0084995', 'FBtr0084999', 'FBtr0085000', 'FBtr0085001', 'FBtr0114544', 'FBtr0310660', 'FBtr0310661', 'FBtr0306657', 'FBtr0339614'] 2021-10-25 09:32:53.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265719: ['FBtr0340661'] 2021-10-25 09:32:53.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265719 has a single transcript. 2021-10-25 09:32:53.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031760: ['FBtr0307300', 'FBtr0113024', 'FBtr0332600'] 2021-10-25 09:32:53.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265720: ['FBtr0340662'] 2021-10-25 09:32:53.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265720 has a single transcript. 2021-10-25 09:32:53.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035236: ['FBtr0072745', 'FBtr0072746', 'FBtr0113122', 'FBtr0345367'] 2021-10-25 09:32:53.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265721: ['FBtr0340663', 'FBtr0340664'] 2021-10-25 09:32:54.014 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:54.015 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.015 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5818290, 5818370), (5818296, 5818370), (5818305, 5818370)] 2021-10-25 09:32:54.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6000599, 6000663), (6000744, 6000804), (6001083, 6001158), (6001083, 6001476), (6001269, 6001476), (6001269, 6001668), (6001593, 6001668)] 2021-10-25 09:32:54.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025115: ['FBtr0080555', 'FBtr0343668'] 2021-10-25 09:32:54.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1569541, 1571985), (1572238, 1572291), (1572457, 1572523), (1572782, 1572968), (1573308, 1573545), (1573620, 1573679), (1573764, 1574987), (1573764, 1573993)] 2021-10-25 09:32:54.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17674823, 17674888), (17675011, 17675074), (17675533, 17676086), (17675533, 17675641), (17675737, 17676086), (17676749, 17676836), (17678178, 17679646), (17678178, 17682458), (17678178, 17682094), (17678178, 17679143), (17678178, 17678651), (17678178, 17682456), (17678178, 17682401)] 2021-10-25 09:32:54.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265722: ['FBtr0340665'] 2021-10-25 09:32:54.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265722 has a single transcript. 2021-10-25 09:32:54.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265723: ['FBtr0340666'] 2021-10-25 09:32:54.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265723 has a single transcript. 2021-10-25 09:32:54.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265724: ['FBtr0340667'] 2021-10-25 09:32:54.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265724 has a single transcript. 2021-10-25 09:32:54.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265725: ['FBtr0340668'] 2021-10-25 09:32:54.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265725 has a single transcript. 2021-10-25 09:32:54.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:54.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265726: ['FBtr0340671', 'FBtr0340672', 'FBtr0340673', 'FBtr0340674', 'FBtr0340675', 'FBtr0340676', 'FBtr0340677', 'FBtr0340678', 'FBtr0340679', 'FBtr0340680'] 2021-10-25 09:32:54.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051646: ['FBtr0079114'] 2021-10-25 09:32:54.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051646 has a single transcript. 2021-10-25 09:32:54.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051647: ['FBtr0308924'] 2021-10-25 09:32:54.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051647 has a single transcript. 2021-10-25 09:32:54.153 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17801211, 17801484), (17803391, 17808098), (17809654, 17820999), (17814752, 17817378), (17817720, 17820999), (17821411, 17828330), (17821411, 17827133), (17823745, 17827133), (17823751, 17827133), (17827328, 17827394), (17828009, 17828330), (17828554, 17828742), (17828905, 17830996), (17831108, 17831670), (17831765, 17834614), (17834671, 17835750), (17835849, 17839041), (17839221, 17839314), (17839439, 17839593), (17839789, 17840434), (17840499, 17840747)] 2021-10-25 09:32:54.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17839041, 17839439, 'FBtr0299705_exon_10') contains intron (17839221, 17839314) 2021-10-25 09:32:54.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17839041, 17839439, 'FBtr0299706_exon_12') contains intron (17839221, 17839314) 2021-10-25 09:32:54.155 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17839041, 17839439, 'FBtr0299707_exon_10') contains intron (17839221, 17839314) 2021-10-25 09:32:54.156 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17839041, 17839439, 'FBtr0300541_exon_10') contains intron (17839221, 17839314) 2021-10-25 09:32:54.157 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17839041, 17839439, 'FBtr0345791_exon_11') contains intron (17839221, 17839314) 2021-10-25 09:32:54.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299705_exon_10', 'FBtr0299706_exon_12', 'FBtr0299707_exon_10', 'FBtr0300541_exon_10', 'FBtr0345791_exon_11'] 2021-10-25 09:32:54.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051648: ['FBtr0079098'] 2021-10-25 09:32:54.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051648 has a single transcript. 2021-10-25 09:32:54.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051658: ['FBtr0078008'] 2021-10-25 09:32:54.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051658 has a single transcript. 2021-10-25 09:32:54.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031762: ['FBtr0079228', 'FBtr0079229', 'FBtr0332602'] 2021-10-25 09:32:54.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051659: ['FBtr0077943', 'FBtr0301010'] 2021-10-25 09:32:54.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025118: ['FBtr0070604'] 2021-10-25 09:32:54.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025118 has a single transcript. 2021-10-25 09:32:54.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26255431, 26256932), (26256307, 26256473), (26256307, 26256932), (26256623, 26256932), (26257132, 26257224), (26258041, 26261335), (26258041, 26259801), (26258041, 26261157), (26258041, 26261153), (26258041, 26258986)] 2021-10-25 09:32:54.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025185: ['FBtr0088980'] 2021-10-25 09:32:54.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025185 has a single transcript. 2021-10-25 09:32:54.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025186: ['FBtr0071774'] 2021-10-25 09:32:54.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025186 has a single transcript. 2021-10-25 09:32:54.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025334: ['FBtr0072224'] 2021-10-25 09:32:54.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025334 has a single transcript. 2021-10-25 09:32:54.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025335: ['FBtr0072227', 'FBtr0343275', 'FBtr0343276', 'FBtr0343277'] 2021-10-25 09:32:54.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1359110, 1359171), (1359270, 1359331), (1359417, 1359466), (1359697, 1359760)] 2021-10-25 09:32:54.230 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1359466, 1359790, 'FBtr0301010_exon_1') contains intron (1359697, 1359760) 2021-10-25 09:32:54.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301010_exon_1'] 2021-10-25 09:32:54.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.235 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6008037, 6008095), (6008502, 6008754), (6009189, 6009244), (6010240, 6010312), (6010670, 6010964), (6010670, 6011554), (6011726, 6011782), (6011924, 6011985), (6011935, 6011985), (6012111, 6012178)] 2021-10-25 09:32:54.236 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035237: ['FBtr0072747', 'FBtr0303993', 'FBtr0333359', 'FBtr0347066'] 2021-10-25 09:32:54.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051660: ['FBtr0077388', 'FBtr0100301', 'FBtr0336831', 'FBtr0304909', 'FBtr0304910'] 2021-10-25 09:32:54.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23864408, 23864759), (23864408, 23865111), (23864408, 23864601)] 2021-10-25 09:32:54.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1577131, 1588752), (1577131, 1588754), (1577131, 1592743), (1587122, 1592743), (1588952, 1592743), (1597545, 1597617), (1598404, 1598464), (1599914, 1599978)] 2021-10-25 09:32:54.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1598464, 1600320, 'FBtr0303993_exon_5') contains intron (1599914, 1599978) 2021-10-25 09:32:54.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303993_exon_5'] 2021-10-25 09:32:54.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031763: ['FBtr0079181'] 2021-10-25 09:32:54.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031763 has a single transcript. 2021-10-25 09:32:54.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031764: ['FBtr0079225', 'FBtr0079226'] 2021-10-25 09:32:54.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13692653, 13706147), (13697243, 13706147), (13700662, 13706147), (13704022, 13706147), (13705890, 13706147), (13706326, 13709404), (13709557, 13711510), (13709557, 13709828), (13710395, 13711510), (13710780, 13711103), (13711893, 13712096), (13712370, 13712628), (13712909, 13712981), (13713141, 13713200), (13713359, 13713423), (13713492, 13714619), (13714735, 13714823), (13714959, 13715762), (13714959, 13715032), (13715611, 13715753), (13716316, 13716375), (13716316, 13716378), (13716774, 13716837)] 2021-10-25 09:32:54.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6024384, 6024439)] 2021-10-25 09:32:54.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4853016, 4854397), (4853016, 4854434), (4854728, 4865147), (4866130, 4870477), (4870717, 4870777), (4870836, 4871075), (4871195, 4871257), (4871338, 4871415), (4871764, 4871824), (4871893, 4871954), (4872356, 4872498), (4872693, 4873817), (4872693, 4873595), (4872693, 4873871), (4873999, 4874057), (4874169, 4874886), (4874169, 4874541), (4874562, 4874886)] 2021-10-25 09:32:54.430 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4874057, 4875233, 'FBtr0304910_exon_13') contains intron (4874169, 4874886) 2021-10-25 09:32:54.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304910_exon_13'] 2021-10-25 09:32:54.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038536: ['FBtr0083479'] 2021-10-25 09:32:54.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038536 has a single transcript. 2021-10-25 09:32:54.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038539: ['FBtr0083533', 'FBtr0346730'] 2021-10-25 09:32:54.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031765: ['FBtr0079224', 'FBtr0343131'] 2021-10-25 09:32:54.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035238: ['FBtr0072825', 'FBtr0344803', 'FBtr0333360'] 2021-10-25 09:32:54.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025336: ['FBtr0072225', 'FBtr0343290'] 2021-10-25 09:32:54.500 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6025950, 6031283), (6025950, 6031292), (6031826, 6032323), (6031859, 6032323), (6032477, 6032793), (6032926, 6033321), (6033589, 6033738), (6033875, 6033930)] 2021-10-25 09:32:54.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:54.505 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259212: ['FBtr0299709', 'FBtr0299710', 'FBtr0300525', 'FBtr0334910', 'FBtr0334911', 'FBtr0334912', 'FBtr0334913', 'FBtr0347363'] 2021-10-25 09:32:54.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23881587, 23881720), (23882060, 23882114), (23882519, 23882817)] 2021-10-25 09:32:54.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1601933, 1602484), (1601933, 1601997)] 2021-10-25 09:32:54.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031766: ['FBtr0079222'] 2021-10-25 09:32:54.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031766 has a single transcript. 2021-10-25 09:32:54.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038540: ['FBtr0083511'] 2021-10-25 09:32:54.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038540 has a single transcript. 2021-10-25 09:32:54.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031768: ['FBtr0079183', 'FBtr0079184', 'FBtr0343120'] 2021-10-25 09:32:54.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038541: ['FBtr0083512', 'FBtr0332173', 'FBtr0332174', 'FBtr0344630'] 2021-10-25 09:32:54.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000071: ['FBtr0081618', 'FBtr0081619', 'FBtr0081620'] 2021-10-25 09:32:54.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025352: ['FBtr0072226'] 2021-10-25 09:32:54.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025352 has a single transcript. 2021-10-25 09:32:54.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025355: ['FBtr0076203'] 2021-10-25 09:32:54.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025355 has a single transcript. 2021-10-25 09:32:54.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6048418, 6048511), (6048630, 6048693), (6048937, 6049010), (6049346, 6049413), (6049632, 6050073)] 2021-10-25 09:32:54.620 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6048182, 6048630, 'FBtr0079184_exon_1') contains intron (6048418, 6048511) 2021-10-25 09:32:54.621 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079184_exon_1'] 2021-10-25 09:32:54.621 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025360: ['FBtr0088865', 'FBtr0088866', 'FBtr0329885'] 2021-10-25 09:32:54.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051661: ['FBtr0077932'] 2021-10-25 09:32:54.631 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051661 has a single transcript. 2021-10-25 09:32:54.642 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6762996, 6763832), (6763500, 6763832), (6763516, 6763832)] 2021-10-25 09:32:54.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051663: ['FBtr0077893', 'FBtr0304597', 'FBtr0334826'] 2021-10-25 09:32:54.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035239: ['FBtr0100190', 'FBtr0100191'] 2021-10-25 09:32:54.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17737317, 17739863), (17739017, 17739863), (17740346, 17741005), (17741108, 17741710), (17741836, 17744122), (17744300, 17744978)] 2021-10-25 09:32:54.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8032244, 8033304), (8033423, 8034290), (8034540, 8041192), (8041116, 8041192)] 2021-10-25 09:32:54.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.684 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1603249, 1603306), (1603399, 1603457), (1605056, 1605158), (1605522, 1605588), (1605661, 1605720), (1606031, 1606085), (1606900, 1606959), (1607114, 1607169), (1608067, 1608133), (1608288, 1616517), (1616762, 1616828)] 2021-10-25 09:32:54.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1607169, 1608288, 'FBtr0100190_exon_9') contains intron (1608067, 1608133) 2021-10-25 09:32:54.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1616517, 1617355, 'FBtr0100190_exon_10') contains intron (1616762, 1616828) 2021-10-25 09:32:54.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100190_exon_9', 'FBtr0100190_exon_10'] 2021-10-25 09:32:54.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1859001, 1862719), (1859001, 1864931), (1862827, 1864931), (1865216, 1865458), (1865775, 1865986), (1866138, 1866220), (1866365, 1866466), (1866897, 1866965), (1867365, 1869073), (1869527, 1875011), (1875175, 1876468), (1876591, 1879966), (1880671, 1881311)] 2021-10-25 09:32:54.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031769: ['FBtr0079185', 'FBtr0079186', 'FBtr0343121', 'FBtr0346135'] 2021-10-25 09:32:54.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5173995, 5174055), (5174177, 5174264), (5176290, 5177293), (5177510, 5177636), (5177510, 5181056), (5177885, 5181056), (5177885, 5178700), (5180828, 5181056), (5180831, 5181056), (5181175, 5181235), (5181483, 5181547), (5182072, 5182419), (5182885, 5183776), (5182885, 5185368), (5183983, 5184278), (5183983, 5185368), (5184523, 5184586), (5184641, 5185368), (5185490, 5187307), (5187660, 5201644), (5187660, 5197939), (5201726, 5202067), (5202586, 5202659), (5202853, 5203049), (5203158, 5203223), (5203434, 5216932), (5203434, 5216937)] 2021-10-25 09:32:54.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000075: ['FBtr0081153', 'FBtr0081154'] 2021-10-25 09:32:54.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035240: ['FBtr0091795', 'FBtr0091792', 'FBtr0091793', 'FBtr0091794', 'FBtr0300891', 'FBtr0300892'] 2021-10-25 09:32:54.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025366: ['FBtr0080017', 'FBtr0331641'] 2021-10-25 09:32:54.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19110350, 19110411), (19110646, 19112793), (19112315, 19112793)] 2021-10-25 09:32:54.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038542: ['FBtr0083532', 'FBtr0344474', 'FBtr0346161'] 2021-10-25 09:32:54.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6050921, 6051616), (6051067, 6051616), (6052022, 6052079), (6052661, 6052721)] 2021-10-25 09:32:54.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10408386, 10408738), (10408621, 10408738)] 2021-10-25 09:32:54.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051664: ['FBtr0303377', 'FBtr0334829'] 2021-10-25 09:32:54.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000077: ['FBtr0071331', 'FBtr0307281'] 2021-10-25 09:32:54.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265727: ['FBtr0340683'] 2021-10-25 09:32:54.859 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265727 has a single transcript. 2021-10-25 09:32:54.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265728: ['FBtr0340684', 'FBtr0340685'] 2021-10-25 09:32:54.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17753058, 17754061), (17754245, 17754975), (17755101, 17755181), (17755284, 17757023), (17757709, 17761996), (17757709, 17758708)] 2021-10-25 09:32:54.887 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1824695, 1824761), (1825133, 1825185), (1825901, 1825986), (1825904, 1825986), (1826274, 1826328)] 2021-10-25 09:32:54.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025373: ['FBtr0088170'] 2021-10-25 09:32:54.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025373 has a single transcript. 2021-10-25 09:32:54.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025378: ['FBtr0070278', 'FBtr0344154'] 2021-10-25 09:32:54.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:54.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1603249, 1603306), (1603399, 1603457), (1605056, 1605158), (1605522, 1605588), (1605661, 1605720), (1606031, 1606085), (1606900, 1606959), (1607114, 1607169), (1608067, 1608133), (1608288, 1616517), (1616762, 1616819), (1616762, 1616828)] 2021-10-25 09:32:54.909 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1607169, 1608288, 'FBtr0091795_exon_7') contains intron (1608067, 1608133) 2021-10-25 09:32:54.909 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1616517, 1617355, 'FBtr0091795_exon_8') contains intron (1616762, 1616819) 2021-10-25 09:32:54.910 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1607169, 1608288, 'FBtr0091793_exon_9') contains intron (1608067, 1608133) 2021-10-25 09:32:54.910 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1616517, 1617355, 'FBtr0091793_exon_10') contains intron (1616762, 1616819) 2021-10-25 09:32:54.911 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0091795_exon_7', 'FBtr0091795_exon_8', 'FBtr0091793_exon_9', 'FBtr0091793_exon_10'] 2021-10-25 09:32:54.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.911 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:54.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1709439, 1709504), (1709775, 1709840)] 2021-10-25 09:32:54.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:54.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:54.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051665: ['FBtr0089786', 'FBtr0304911', 'FBtr0334823'] 2021-10-25 09:32:54.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265729: ['FBtr0340686'] 2021-10-25 09:32:54.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265729 has a single transcript. 2021-10-25 09:32:54.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031770: ['FBtr0079187'] 2021-10-25 09:32:54.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031770 has a single transcript. 2021-10-25 09:32:54.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265730: ['FBtr0340687'] 2021-10-25 09:32:54.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265730 has a single transcript. 2021-10-25 09:32:54.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000078: ['FBtr0086983'] 2021-10-25 09:32:54.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000078 has a single transcript. 2021-10-25 09:32:54.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031771: ['FBtr0079216', 'FBtr0343129'] 2021-10-25 09:32:54.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265731: ['FBtr0340688'] 2021-10-25 09:32:54.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265731 has a single transcript. 2021-10-25 09:32:55.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000079: ['FBtr0087004', 'FBtr0345521'] 2021-10-25 09:32:55.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265732: ['FBtr0340690'] 2021-10-25 09:32:55.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265732 has a single transcript. 2021-10-25 09:32:55.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038545: ['FBtr0083513', 'FBtr0305007'] 2021-10-25 09:32:55.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265733: ['FBtr0340691'] 2021-10-25 09:32:55.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265733 has a single transcript. 2021-10-25 09:32:55.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265734: ['FBtr0340692'] 2021-10-25 09:32:55.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265734 has a single transcript. 2021-10-25 09:32:55.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265735: ['FBtr0340689'] 2021-10-25 09:32:55.025 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265735 has a single transcript. 2021-10-25 09:32:55.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1836652, 1842898), (1836652, 1837172), (1837406, 1842898), (1844720, 1848064), (1848213, 1851109), (1848213, 1851106), (1851273, 1851691), (1851964, 1852053), (1852150, 1852657), (1852785, 1853453), (1853596, 1854185), (1854308, 1855363), (1854308, 1855372), (1855475, 1855615), (1855797, 1856429)] 2021-10-25 09:32:55.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025381: ['FBtr0070259', 'FBtr0339589'] 2021-10-25 09:32:55.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265736: ['FBtr0340693'] 2021-10-25 09:32:55.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265736 has a single transcript. 2021-10-25 09:32:55.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265737: ['FBtr0340694'] 2021-10-25 09:32:55.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265737 has a single transcript. 2021-10-25 09:32:55.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6061123, 6061186), (6062021, 6062078), (6062435, 6062641)] 2021-10-25 09:32:55.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265738: ['FBtr0340695'] 2021-10-25 09:32:55.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265738 has a single transcript. 2021-10-25 09:32:55.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265739: ['FBtr0340696'] 2021-10-25 09:32:55.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265739 has a single transcript. 2021-10-25 09:32:55.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:55.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17795137, 17795360), (17795195, 17795360), (17795639, 17795700), (17795800, 17795862), (17795913, 17795994)] 2021-10-25 09:32:55.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265740: ['FBtr0340697'] 2021-10-25 09:32:55.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265740 has a single transcript. 2021-10-25 09:32:55.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265741: ['FBtr0340698'] 2021-10-25 09:32:55.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265741 has a single transcript. 2021-10-25 09:32:55.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259213: ['FBtr0299711', 'FBtr0345431'] 2021-10-25 09:32:55.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265742: ['FBtr0340699'] 2021-10-25 09:32:55.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265742 has a single transcript. 2021-10-25 09:32:55.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1480220, 1481007), (1480859, 1481007)] 2021-10-25 09:32:55.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265743: ['FBtr0340700'] 2021-10-25 09:32:55.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265743 has a single transcript. 2021-10-25 09:32:55.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265744: ['FBtr0340701'] 2021-10-25 09:32:55.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265744 has a single transcript. 2021-10-25 09:32:55.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031772: ['FBtr0079188', 'FBtr0343122'] 2021-10-25 09:32:55.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265745: ['FBtr0340702'] 2021-10-25 09:32:55.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265745 has a single transcript. 2021-10-25 09:32:55.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265746: ['FBtr0340703'] 2021-10-25 09:32:55.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265746 has a single transcript. 2021-10-25 09:32:55.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265747: ['FBtr0340704'] 2021-10-25 09:32:55.103 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265747 has a single transcript. 2021-10-25 09:32:55.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265748: ['FBtr0340711'] 2021-10-25 09:32:55.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265748 has a single transcript. 2021-10-25 09:32:55.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14909171, 14911970), (14912212, 14912872), (14912981, 14913145), (14913333, 14914267), (14914449, 14916099), (14916241, 14917138), (14917220, 14917372), (14917484, 14919167), (14919270, 14921937), (14922097, 14922948), (14923079, 14932513), (14932658, 14934868), (14935014, 14935886), (14936090, 14936505), (14936619, 14936730), (14936815, 14938910), (14939028, 14941517), (14941644, 14962892), (14963359, 14971542)] 2021-10-25 09:32:55.112 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.112 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038546: ['FBtr0083529'] 2021-10-25 09:32:55.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038546 has a single transcript. 2021-10-25 09:32:55.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265749: ['FBtr0340710'] 2021-10-25 09:32:55.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265749 has a single transcript. 2021-10-25 09:32:55.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265750: ['FBtr0340712'] 2021-10-25 09:32:55.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265750 has a single transcript. 2021-10-25 09:32:55.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038547: ['FBtr0083528', 'FBtr0347216'] 2021-10-25 09:32:55.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265751: ['FBtr0340713'] 2021-10-25 09:32:55.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265751 has a single transcript. 2021-10-25 09:32:55.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265752: ['FBtr0340714'] 2021-10-25 09:32:55.137 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265752 has a single transcript. 2021-10-25 09:32:55.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051668: ['FBtr0307523'] 2021-10-25 09:32:55.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051668 has a single transcript. 2021-10-25 09:32:55.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265753: ['FBtr0340715'] 2021-10-25 09:32:55.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265753 has a single transcript. 2021-10-25 09:32:55.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000083: ['FBtr0089520', 'FBtr0089517', 'FBtr0089518', 'FBtr0089519', 'FBtr0336797', 'FBtr0336798'] 2021-10-25 09:32:55.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6063230, 6063282)] 2021-10-25 09:32:55.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025382: ['FBtr0070293', 'FBtr0070294'] 2021-10-25 09:32:55.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265754: ['FBtr0340716'] 2021-10-25 09:32:55.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265754 has a single transcript. 2021-10-25 09:32:55.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051669: ['FBtr0077860'] 2021-10-25 09:32:55.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051669 has a single transcript. 2021-10-25 09:32:55.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265755: ['FBtr0340717'] 2021-10-25 09:32:55.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265755 has a single transcript. 2021-10-25 09:32:55.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051673: ['FBtr0081422', 'FBtr0339562'] 2021-10-25 09:32:55.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265756: ['FBtr0340718'] 2021-10-25 09:32:55.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265756 has a single transcript. 2021-10-25 09:32:55.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035241: ['FBtr0072824', 'FBtr0331463'] 2021-10-25 09:32:55.167 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17799240, 17799307), (17799628, 17799684), (17800523, 17800723), (17801050, 17801125)] 2021-10-25 09:32:55.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265757: ['FBtr0340719'] 2021-10-25 09:32:55.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265757 has a single transcript. 2021-10-25 09:32:55.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265758: ['FBtr0340720'] 2021-10-25 09:32:55.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265758 has a single transcript. 2021-10-25 09:32:55.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1474510, 1474674), (1474794, 1476255), (1474892, 1476255)] 2021-10-25 09:32:55.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265759: ['FBtr0340721'] 2021-10-25 09:32:55.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265759 has a single transcript. 2021-10-25 09:32:55.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265760: ['FBtr0340722'] 2021-10-25 09:32:55.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265760 has a single transcript. 2021-10-25 09:32:55.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265761: ['FBtr0340723'] 2021-10-25 09:32:55.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265761 has a single transcript. 2021-10-25 09:32:55.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20830073, 20830280), (20830612, 20830670), (20830793, 20830860), (20830796, 20830860)] 2021-10-25 09:32:55.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265762: ['FBtr0340727'] 2021-10-25 09:32:55.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265762 has a single transcript. 2021-10-25 09:32:55.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031773: ['FBtr0079215'] 2021-10-25 09:32:55.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031773 has a single transcript. 2021-10-25 09:32:55.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:55.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265763: ['FBtr0340726'] 2021-10-25 09:32:55.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265763 has a single transcript. 2021-10-25 09:32:55.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259214: ['FBtr0304046', 'FBtr0304047', 'FBtr0304048', 'FBtr0304049', 'FBtr0304050', 'FBtr0300554', 'FBtr0300555', 'FBtr0300556', 'FBtr0300557', 'FBtr0300558', 'FBtr0300559'] 2021-10-25 09:32:55.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265764: ['FBtr0340724'] 2021-10-25 09:32:55.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265764 has a single transcript. 2021-10-25 09:32:55.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031774: ['FBtr0079189', 'FBtr0079190', 'FBtr0343123', 'FBtr0343124'] 2021-10-25 09:32:55.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265765: ['FBtr0340725'] 2021-10-25 09:32:55.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265765 has a single transcript. 2021-10-25 09:32:55.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038548: ['FBtr0083527'] 2021-10-25 09:32:55.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038548 has a single transcript. 2021-10-25 09:32:55.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265766: ['FBtr0340728'] 2021-10-25 09:32:55.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038549: ['FBtr0083526'] 2021-10-25 09:32:55.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025383: ['FBtr0070257'] 2021-10-25 09:32:55.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265766 has a single transcript. 2021-10-25 09:32:55.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038549 has a single transcript. 2021-10-25 09:32:55.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025383 has a single transcript. 2021-10-25 09:32:55.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038550: ['FBtr0331689'] 2021-10-25 09:32:55.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038550 has a single transcript. 2021-10-25 09:32:55.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025387: ['FBtr0070696', 'FBtr0343532', 'FBtr0335037'] 2021-10-25 09:32:55.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038551: ['FBtr0083524'] 2021-10-25 09:32:55.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038551 has a single transcript. 2021-10-25 09:32:55.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265767: ['FBtr0347557', 'FBtr0113768', 'FBtr0113769', 'FBtr0301132', 'FBtr0301133', 'FBtr0340198', 'FBtr0340199'] 2021-10-25 09:32:55.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038552: ['FBtr0083523'] 2021-10-25 09:32:55.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038552 has a single transcript. 2021-10-25 09:32:55.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038558: ['FBtr0083519', 'FBtr0308497'] 2021-10-25 09:32:55.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051674: ['FBtr0081423', 'FBtr0339563'] 2021-10-25 09:32:55.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035243: ['FBtr0072823'] 2021-10-25 09:32:55.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035243 has a single transcript. 2021-10-25 09:32:55.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035244: ['FBtr0072754', 'FBtr0072755'] 2021-10-25 09:32:55.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:55.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4627741, 4627822), (4627759, 4627822), (4627971, 4628028), (4628626, 4628700), (4629686, 4629739)] 2021-10-25 09:32:55.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20831395, 20831466), (20831878, 20831949), (20832287, 20832339), (20832465, 20832664)] 2021-10-25 09:32:55.318 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20831261, 20831878, 'FBtr0081423_exon_1') contains intron (20831395, 20831466) 2021-10-25 09:32:55.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081423_exon_1'] 2021-10-25 09:32:55.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21065285, 21067445), (21065310, 21067445), (21065401, 21067445), (21065951, 21067445), (21067499, 21068068), (21068777, 21068837), (21069019, 21070723), (21069019, 21069312), (21069019, 21070277)] 2021-10-25 09:32:55.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.328 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6066054, 6066269), (6066054, 6066223), (6066206, 6066269), (6066312, 6066368), (6067235, 6067288)] 2021-10-25 09:32:55.329 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6066086, 6066312, 'FBtr0079190_exon_1') contains intron (6066206, 6066269) 2021-10-25 09:32:55.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079190_exon_1'] 2021-10-25 09:32:55.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1618617, 1620427), (1620554, 1620918), (1620554, 1620816), (1621042, 1621102), (1621257, 1621316), (1622665, 1622731)] 2021-10-25 09:32:55.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051675: ['FBtr0081429'] 2021-10-25 09:32:55.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051675 has a single transcript. 2021-10-25 09:32:55.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038564: ['FBtr0083539'] 2021-10-25 09:32:55.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038564 has a single transcript. 2021-10-25 09:32:55.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051676: ['FBtr0081424', 'FBtr0339564'] 2021-10-25 09:32:55.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038565: ['FBtr0083540'] 2021-10-25 09:32:55.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038565 has a single transcript. 2021-10-25 09:32:55.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038566: ['FBtr0083541'] 2021-10-25 09:32:55.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038566 has a single transcript. 2021-10-25 09:32:55.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23023431, 23030189), (23023800, 23030189), (23025448, 23030189), (23028597, 23029023), (23028597, 23030189), (23028610, 23030189), (23029192, 23030189), (23030363, 23030421), (23030609, 23030666), (23030853, 23032519), (23030853, 23032745), (23032600, 23032745), (23033249, 23033542), (23033644, 23033701)] 2021-10-25 09:32:55.405 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038567: ['FBtr0083546'] 2021-10-25 09:32:55.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038567 has a single transcript. 2021-10-25 09:32:55.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035245: ['FBtr0072821', 'FBtr0302024'] 2021-10-25 09:32:55.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038568: ['FBtr0083547'] 2021-10-25 09:32:55.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038568 has a single transcript. 2021-10-25 09:32:55.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025388: ['FBtr0300754', 'FBtr0300755'] 2021-10-25 09:32:55.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038569: ['FBtr0083623', 'FBtr0344646'] 2021-10-25 09:32:55.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20841044, 20845342), (20845528, 20848556)] 2021-10-25 09:32:55.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4631730, 4631813), (4631962, 4632019), (4632746, 4632817), (4633824, 4633877)] 2021-10-25 09:32:55.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1624597, 1624669), (1625016, 1625074), (1625678, 1628998)] 2021-10-25 09:32:55.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.473 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18163029, 18163103), (18163714, 18164103)] 2021-10-25 09:32:55.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031775: ['FBtr0302213'] 2021-10-25 09:32:55.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031775 has a single transcript. 2021-10-25 09:32:55.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031776: ['FBtr0079191', 'FBtr0343125'] 2021-10-25 09:32:55.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(329428, 342921), (329428, 337535), (329428, 330270), (330339, 342921), (330339, 331397), (330339, 337535), (332002, 342921), (335073, 342921), (337547, 342921), (343060, 348994), (349146, 349212), (349424, 349480), (349679, 349729), (350043, 350602), (350690, 350764), (351209, 351585), (351827, 351883), (352126, 352180), (352590, 354350), (352590, 353942), (353978, 354350), (354561, 354679), (354966, 355030), (355225, 355309), (355481, 358549), (355481, 358631), (355481, 358843)] 2021-10-25 09:32:55.503 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (329516, 332002, 'FBtr0304050_exon_17') contains intron (330339, 331397) 2021-10-25 09:32:55.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304050_exon_17'] 2021-10-25 09:32:55.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051677: ['FBtr0081407'] 2021-10-25 09:32:55.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051677 has a single transcript. 2021-10-25 09:32:55.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035246: ['FBtr0072822'] 2021-10-25 09:32:55.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035246 has a single transcript. 2021-10-25 09:32:55.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051678: ['FBtr0290059', 'FBtr0290060', 'FBtr0344108'] 2021-10-25 09:32:55.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035247: ['FBtr0072813', 'FBtr0072814'] 2021-10-25 09:32:55.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025390: ['FBtr0070284', 'FBtr0343517', 'FBtr0303587'] 2021-10-25 09:32:55.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6069250, 6069346), (6069489, 6069558)] 2021-10-25 09:32:55.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038570: ['FBtr0100619', 'FBtr0100620'] 2021-10-25 09:32:55.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000084: ['FBtr0070025', 'FBtr0301931'] 2021-10-25 09:32:55.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1638854, 1639041), (1638854, 1638908)] 2021-10-25 09:32:55.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.577 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18165895, 18166025), (18166160, 18166354), (18167071, 18167130)] 2021-10-25 09:32:55.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.598 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20660385, 20660448), (20661148, 20661989), (20663929, 20663997), (20664209, 20674994), (20664209, 20664290), (20664449, 20667865), (20675570, 20675636)] 2021-10-25 09:32:55.599 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.599 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031777: ['FBtr0079213', 'FBtr0343128'] 2021-10-25 09:32:55.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1524318, 1552610), (1552527, 1552610), (1552736, 1554667), (1554563, 1554667), (1557593, 1557658), (1557772, 1557914), (1558791, 1584140), (1584255, 1604735), (1604788, 1618031), (1604788, 1664117), (1664306, 1668492)] 2021-10-25 09:32:55.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20171648, 20171928), (20171648, 20172040), (20171931, 20172040), (20172222, 20172304), (20173016, 20173368)] 2021-10-25 09:32:55.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035248: ['FBtr0072759'] 2021-10-25 09:32:55.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035248 has a single transcript. 2021-10-25 09:32:55.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035249: ['FBtr0072810'] 2021-10-25 09:32:55.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035249 has a single transcript. 2021-10-25 09:32:55.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035251: ['FBtr0072809'] 2021-10-25 09:32:55.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035251 has a single transcript. 2021-10-25 09:32:55.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6070178, 6070232), (6070392, 6070448)] 2021-10-25 09:32:55.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.654 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035252: ['FBtr0072762', 'FBtr0331460', 'FBtr0346821'] 2021-10-25 09:32:55.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038571: ['FBtr0100283', 'FBtr0300247'] 2021-10-25 09:32:55.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000092: ['FBtr0070504'] 2021-10-25 09:32:55.694 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000092 has a single transcript. 2021-10-25 09:32:55.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000094: ['FBtr0085611', 'FBtr0346141'] 2021-10-25 09:32:55.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18165895, 18166025), (18166160, 18166354), (18167071, 18167130)] 2021-10-25 09:32:55.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025391: ['FBtr0070277', 'FBtr0302174', 'FBtr0302175', 'FBtr0345509'] 2021-10-25 09:32:55.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265778: ['FBtr0079249', 'FBtr0300038', 'FBtr0300039', 'FBtr0333242'] 2021-10-25 09:32:55.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051679: ['FBtr0077809'] 2021-10-25 09:32:55.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051679 has a single transcript. 2021-10-25 09:32:55.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031778: ['FBtr0308942'] 2021-10-25 09:32:55.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031778 has a single transcript. 2021-10-25 09:32:55.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051680: ['FBtr0081383'] 2021-10-25 09:32:55.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051680 has a single transcript. 2021-10-25 09:32:55.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051681: ['FBtr0077802'] 2021-10-25 09:32:55.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051681 has a single transcript. 2021-10-25 09:32:55.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031779: ['FBtr0079211', 'FBtr0079212'] 2021-10-25 09:32:55.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1653043, 1653141), (1653043, 1653130), (1653254, 1653316), (1653575, 1653634)] 2021-10-25 09:32:55.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.742 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30210080, 30210142)] 2021-10-25 09:32:55.743 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.743 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051682: ['FBtr0077807'] 2021-10-25 09:32:55.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051682 has a single transcript. 2021-10-25 09:32:55.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051683: ['FBtr0081365', 'FBtr0330662'] 2021-10-25 09:32:55.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038575: ['FBtr0083618', 'FBtr0083617'] 2021-10-25 09:32:55.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6097253, 6097310), (6097473, 6097543), (6098491, 6098555), (6098837, 6098932)] 2021-10-25 09:32:55.777 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6098555, 6098966, 'FBtr0079211_exon_1') contains intron (6098837, 6098932) 2021-10-25 09:32:55.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079211_exon_1'] 2021-10-25 09:32:55.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20448285, 20448350), (20448873, 20448941), (20449313, 20449380)] 2021-10-25 09:32:55.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000097: ['FBtr0077850', 'FBtr0077851', 'FBtr0330658', 'FBtr0330659', 'FBtr0330660'] 2021-10-25 09:32:55.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18184593, 18184657), (18185145, 18185534), (18185145, 18185260)] 2021-10-25 09:32:55.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.857 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6323993, 6325172), (6324118, 6325172), (6325297, 6325356), (6325602, 6325712), (6329487, 6329547), (6329697, 6330770), (6329697, 6330122), (6330563, 6330770), (6330718, 6330770), (6330886, 6331046), (6330886, 6331043)] 2021-10-25 09:32:55.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1737163, 1746273), (1746579, 1746686), (1746810, 1748031), (1748293, 1749696), (1749817, 1749894), (1750484, 1753715), (1750484, 1753721)] 2021-10-25 09:32:55.859 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:55.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031782: ['FBtr0333407', 'FBtr0346267'] 2021-10-25 09:32:55.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051687: ['FBtr0332968', 'FBtr0302224'] 2021-10-25 09:32:55.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035253: ['FBtr0072808', 'FBtr0072807', 'FBtr0072806', 'FBtr0309252', 'FBtr0344837', 'FBtr0303107'] 2021-10-25 09:32:55.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6126595, 6126654), (6126843, 6126901), (6127553, 6127609)] 2021-10-25 09:32:55.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:55.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038576: ['FBtr0083557', 'FBtr0336468'] 2021-10-25 09:32:55.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20451276, 20451334)] 2021-10-25 09:32:56.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2158405, 2158467), (2159245, 2159311), (2160582, 2161009), (2160582, 2171141), (2160582, 2177846), (2160582, 2161232), (2171198, 2177846)] 2021-10-25 09:32:56.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.087 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18186314, 18186372)] 2021-10-25 09:32:56.089 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031784: ['FBtr0079201'] 2021-10-25 09:32:56.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031784 has a single transcript. 2021-10-25 09:32:56.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259215: ['FBtr0336970'] 2021-10-25 09:32:56.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259215 has a single transcript. 2021-10-25 09:32:56.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031785: ['FBtr0079202'] 2021-10-25 09:32:56.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031785 has a single transcript. 2021-10-25 09:32:56.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031786: ['FBtr0079204'] 2021-10-25 09:32:56.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031786 has a single transcript. 2021-10-25 09:32:56.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259216: ['FBtr0299722', 'FBtr0299723', 'FBtr0308691', 'FBtr0334407'] 2021-10-25 09:32:56.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031791: ['FBtr0079243', 'FBtr0340167'] 2021-10-25 09:32:56.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025393: ['FBtr0070285'] 2021-10-25 09:32:56.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025393 has a single transcript. 2021-10-25 09:32:56.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051690: ['FBtr0301682'] 2021-10-25 09:32:56.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051690 has a single transcript. 2021-10-25 09:32:56.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025394: ['FBtr0070260', 'FBtr0339591', 'FBtr0339590'] 2021-10-25 09:32:56.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265784: ['FBtr0074555', 'FBtr0074557', 'FBtr0112878', 'FBtr0112879', 'FBtr0308232', 'FBtr0310340', 'FBtr0310341', 'FBtr0346093', 'FBtr0446106'] 2021-10-25 09:32:56.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051693: ['FBtr0085931', 'FBtr0100262'] 2021-10-25 09:32:56.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038577: ['FBtr0083616'] 2021-10-25 09:32:56.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038577 has a single transcript. 2021-10-25 09:32:56.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038578: ['FBtr0083558'] 2021-10-25 09:32:56.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038578 has a single transcript. 2021-10-25 09:32:56.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:56.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038579: ['FBtr0083615'] 2021-10-25 09:32:56.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038579 has a single transcript. 2021-10-25 09:32:56.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038581: ['FBtr0083560'] 2021-10-25 09:32:56.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038581 has a single transcript. 2021-10-25 09:32:56.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038582: ['FBtr0083561'] 2021-10-25 09:32:56.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038582 has a single transcript. 2021-10-25 09:32:56.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038583: ['FBtr0083610', 'FBtr0336471'] 2021-10-25 09:32:56.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22015396, 22015452)] 2021-10-25 09:32:56.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22015189, 22017334, 'FBtr0085931_exon_1') contains intron (22015396, 22015452) 2021-10-25 09:32:56.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085931_exon_1'] 2021-10-25 09:32:56.283 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1654726, 1654806), (1654726, 1655253), (1655151, 1655253), (1655460, 1655524), (1655709, 1656678), (1658464, 1658519), (1658590, 1659845), (1659990, 1661108), (1660857, 1661108), (1661165, 1661226), (1661592, 1661706), (1661592, 1663919), (1662381, 1663919), (1664021, 1664089), (1664021, 1664531), (1664844, 1664917)] 2021-10-25 09:32:56.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1660598, 1661165, 'FBtr0072808_exon_4') contains intron (1660857, 1661108) 2021-10-25 09:32:56.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1655524, 1658464, 'FBtr0303107_exon_9') contains intron (1655709, 1656678) 2021-10-25 09:32:56.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072808_exon_4', 'FBtr0303107_exon_9'] 2021-10-25 09:32:56.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(257404, 258311), (258466, 258527), (258672, 259277), (259370, 259446), (259604, 261229), (261511, 261573), (261724, 261776), (262062, 263205), (262062, 262382), (263340, 264351), (264429, 264527), (264429, 264485), (264670, 264743)] 2021-10-25 09:32:56.314 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (261776, 262519, 'FBtr0299722_exon_8') contains intron (262062, 262382) 2021-10-25 09:32:56.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299722_exon_8'] 2021-10-25 09:32:56.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.318 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1483558, 1510753), (1511100, 1512064), (1513648, 1514482), (1514668, 1514726), (1514792, 1514856), (1515041, 1515377)] 2021-10-25 09:32:56.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.321 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18220363, 18220549)] 2021-10-25 09:32:56.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031792: ['FBtr0079285'] 2021-10-25 09:32:56.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031792 has a single transcript. 2021-10-25 09:32:56.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031799: ['FBtr0079284', 'FBtr0331226'] 2021-10-25 09:32:56.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051694: ['FBtr0077685'] 2021-10-25 09:32:56.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051694 has a single transcript. 2021-10-25 09:32:56.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051697: ['FBtr0081250'] 2021-10-25 09:32:56.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051697 has a single transcript. 2021-10-25 09:32:56.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051698: ['FBtr0077612', 'FBtr0344143'] 2021-10-25 09:32:56.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038584: ['FBtr0083609'] 2021-10-25 09:32:56.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000100: ['FBtr0078481', 'FBtr0334113'] 2021-10-25 09:32:56.413 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6333421, 6333483), (6333807, 6333861), (6334038, 6334105), (6334324, 6334385), (6335253, 6335314), (6337271, 6338057), (6338493, 6338647)] 2021-10-25 09:32:56.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038584 has a single transcript. 2021-10-25 09:32:56.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038585: ['FBtr0083562'] 2021-10-25 09:32:56.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038585 has a single transcript. 2021-10-25 09:32:56.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038586: ['FBtr0083608'] 2021-10-25 09:32:56.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038586 has a single transcript. 2021-10-25 09:32:56.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038588: ['FBtr0083606'] 2021-10-25 09:32:56.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038588 has a single transcript. 2021-10-25 09:32:56.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038589: ['FBtr0083569'] 2021-10-25 09:32:56.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038589 has a single transcript. 2021-10-25 09:32:56.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038590: ['FBtr0083605', 'FBtr0347215'] 2021-10-25 09:32:56.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3173412, 3173479)] 2021-10-25 09:32:56.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025454: ['FBtr0087992', 'FBtr0339596'] 2021-10-25 09:32:56.556 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22075926, 22076034), (22076136, 22076247), (22076341, 22076415)] 2021-10-25 09:32:56.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031800: ['FBtr0079283', 'FBtr0331225'] 2021-10-25 09:32:56.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:56.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18366557, 18367003), (18366719, 18367003), (18367179, 18372030), (18371182, 18372030), (18371606, 18372030), (18372432, 18373033), (18373201, 18373286), (18373213, 18373286), (18373455, 18375248), (18373455, 18375842), (18375386, 18375842)] 2021-10-25 09:32:56.610 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18366560, 18367179, 'FBtr0112878_exon_1') contains intron (18366719, 18367003) 2021-10-25 09:32:56.611 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18366560, 18367179, 'FBtr0112879_exon_1') contains intron (18366719, 18367003) 2021-10-25 09:32:56.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112878_exon_1', 'FBtr0112879_exon_1'] 2021-10-25 09:32:56.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259219: ['FBtr0299736', 'FBtr0299737', 'FBtr0299738', 'FBtr0299739', 'FBtr0299740', 'FBtr0299741'] 2021-10-25 09:32:56.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12185825, 12186404), (12185825, 12186391), (12186902, 12186967), (12187768, 12187828)] 2021-10-25 09:32:56.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051700: ['FBtr0301969'] 2021-10-25 09:32:56.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000108: ['FBtr0070109', 'FBtr0307291', 'FBtr0307292', 'FBtr0307293', 'FBtr0307294', 'FBtr0307295'] 2021-10-25 09:32:56.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051700 has a single transcript. 2021-10-25 09:32:56.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051702: ['FBtr0085934'] 2021-10-25 09:32:56.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051702 has a single transcript. 2021-10-25 09:32:56.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051703: ['FBtr0085946'] 2021-10-25 09:32:56.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051703 has a single transcript. 2021-10-25 09:32:56.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051704: ['FBtr0080273', 'FBtr0333421'] 2021-10-25 09:32:56.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038592: ['FBtr0083571'] 2021-10-25 09:32:56.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038592 has a single transcript. 2021-10-25 09:32:56.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038593: ['FBtr0083601'] 2021-10-25 09:32:56.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038593 has a single transcript. 2021-10-25 09:32:56.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038595: ['FBtr0083600'] 2021-10-25 09:32:56.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038595 has a single transcript. 2021-10-25 09:32:56.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6347393, 6347459), (6347628, 6347786)] 2021-10-25 09:32:56.791 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.791 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038596: ['FBtr0083599'] 2021-10-25 09:32:56.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038596 has a single transcript. 2021-10-25 09:32:56.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038597: ['FBtr0083574'] 2021-10-25 09:32:56.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038597 has a single transcript. 2021-10-25 09:32:56.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038598: ['FBtr0083597'] 2021-10-25 09:32:56.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038598 has a single transcript. 2021-10-25 09:32:56.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038601: ['FBtr0083594'] 2021-10-25 09:32:56.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035254: ['FBtr0072763', 'FBtr0333923'] 2021-10-25 09:32:56.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038601 has a single transcript. 2021-10-25 09:32:56.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025455: ['FBtr0075205', 'FBtr0075206', 'FBtr0333124', 'FBtr0333125'] 2021-10-25 09:32:56.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038602: ['FBtr0083593'] 2021-10-25 09:32:56.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038602 has a single transcript. 2021-10-25 09:32:56.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:56.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038603: ['FBtr0083589', 'FBtr0083590', 'FBtr0083591', 'FBtr0083592', 'FBtr0290023', 'FBtr0330312', 'FBtr0330313', 'FBtr0337036', 'FBtr0337037'] 2021-10-25 09:32:56.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1665366, 1665420), (1666034, 1666089)] 2021-10-25 09:32:56.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031801: ['FBtr0079282'] 2021-10-25 09:32:56.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031801 has a single transcript. 2021-10-25 09:32:56.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031802: ['FBtr0079281'] 2021-10-25 09:32:56.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031802 has a single transcript. 2021-10-25 09:32:56.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051706: ['FBtr0080241', 'FBtr0336629'] 2021-10-25 09:32:56.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031803: ['FBtr0346719'] 2021-10-25 09:32:56.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031803 has a single transcript. 2021-10-25 09:32:56.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031804: ['FBtr0079280'] 2021-10-25 09:32:56.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031804 has a single transcript. 2021-10-25 09:32:56.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031805: ['FBtr0079253'] 2021-10-25 09:32:56.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031805 has a single transcript. 2021-10-25 09:32:56.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13260417, 13260477), (13260894, 13262642), (13262507, 13262642), (13262582, 13262642), (13262794, 13262905), (13262997, 13263492), (13262997, 13264369), (13263665, 13263799), (13265121, 13265320), (13265388, 13265452)] 2021-10-25 09:32:56.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031808: ['FBtr0079255'] 2021-10-25 09:32:56.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031808 has a single transcript. 2021-10-25 09:32:56.968 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13262484, 13262794, 'FBtr0299738_exon_1') contains intron (13262507, 13262642) 2021-10-25 09:32:56.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299738_exon_1'] 2021-10-25 09:32:56.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031811: ['FBtr0079256', 'FBtr0343151'] 2021-10-25 09:32:56.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035255: ['FBtr0301528'] 2021-10-25 09:32:56.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035255 has a single transcript. 2021-10-25 09:32:56.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035256: ['FBtr0072803'] 2021-10-25 09:32:56.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035256 has a single transcript. 2021-10-25 09:32:56.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11530183, 11530573)] 2021-10-25 09:32:56.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:56.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035257: ['FBtr0072764'] 2021-10-25 09:32:56.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035257 has a single transcript. 2021-10-25 09:32:56.998 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17554878, 17554934), (17555530, 17556373), (17555530, 17556142), (17556419, 17556495)] 2021-10-25 09:32:56.999 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:56.999 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035258: ['FBtr0072802', 'FBtr0334081'] 2021-10-25 09:32:57.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(530534, 531626), (531189, 531626), (531876, 560605), (531876, 570861), (560776, 570861), (571000, 571130), (571000, 571133), (571352, 571426), (572058, 572136), (572058, 572148), (572070, 572136), (572070, 572148), (572289, 573852), (572289, 573864), (574002, 574195), (574878, 574941), (574878, 574944), (575089, 575167), (575350, 575470), (575362, 575470)] 2021-10-25 09:32:57.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6412858, 6413180), (6413366, 6413422)] 2021-10-25 09:32:57.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1701904, 1702293)] 2021-10-25 09:32:57.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051708: ['FBtr0079777', 'FBtr0079776', 'FBtr0303881'] 2021-10-25 09:32:57.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031813: ['FBtr0089948', 'FBtr0114603', 'FBtr0329952', 'FBtr0345720'] 2021-10-25 09:32:57.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035260: ['FBtr0303102', 'FBtr0303103'] 2021-10-25 09:32:57.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18304062, 18304131), (18304869, 18304927), (18305909, 18306618), (18306803, 18306877), (18307015, 18307456), (18307601, 18308981), (18309536, 18314190), (18309536, 18310726), (18309536, 18310800), (18309536, 18310703), (18309536, 18310638), (18310781, 18311741)] 2021-10-25 09:32:57.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9053080, 9053297), (9053140, 9053297), (9053429, 9055019), (9055162, 9055261), (9055412, 9059470), (9059599, 9059691), (9059850, 9060709), (9060926, 9062399), (9062506, 9066079), (9066760, 9070831), (9066760, 9070949)] 2021-10-25 09:32:57.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.141 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083590': ['FBtr0330313']} 2021-10-25 09:32:57.141 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330313']] 2021-10-25 09:32:57.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025456: ['FBtr0089895', 'FBtr0089896', 'FBtr0089897', 'FBtr0305991'] 2021-10-25 09:32:57.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1675167, 1698646), (1689613, 1698646), (1698703, 1712273), (1712783, 1712840)] 2021-10-25 09:32:57.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.190 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6426911, 6445118), (6445229, 6445286), (6445577, 6445641), (6445796, 6445860), (6446131, 6446195), (6446673, 6446749), (6447240, 6447300), (6447435, 6447606), (6447766, 6447941)] 2021-10-25 09:32:57.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265785: ['FBtr0342613'] 2021-10-25 09:32:57.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265785 has a single transcript. 2021-10-25 09:32:57.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259221: ['FBtr0299754', 'FBtr0299755', 'FBtr0299756', 'FBtr0299757', 'FBtr0299758', 'FBtr0299759', 'FBtr0299760', 'FBtr0299761', 'FBtr0299762', 'FBtr0299763', 'FBtr0299764', 'FBtr0299765', 'FBtr0303100', 'FBtr0306698'] 2021-10-25 09:32:57.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265786: ['FBtr0342610'] 2021-10-25 09:32:57.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265786 has a single transcript. 2021-10-25 09:32:57.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035262: ['FBtr0072800'] 2021-10-25 09:32:57.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035262 has a single transcript. 2021-10-25 09:32:57.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265787: ['FBtr0342611'] 2021-10-25 09:32:57.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265787 has a single transcript. 2021-10-25 09:32:57.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035263: ['FBtr0072766'] 2021-10-25 09:32:57.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035263 has a single transcript. 2021-10-25 09:32:57.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265788: ['FBtr0342619', 'FBtr0345757'] 2021-10-25 09:32:57.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035264: ['FBtr0072797', 'FBtr0334077'] 2021-10-25 09:32:57.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17393600, 17393672), (17393600, 17393815), (17393754, 17393815), (17394261, 17394535), (17394266, 17394535)] 2021-10-25 09:32:57.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051709: ['FBtr0079856', 'FBtr0346456'] 2021-10-25 09:32:57.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5887875, 5887943)] 2021-10-25 09:32:57.273 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.273 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1731520, 1731588), (1733289, 1733344), (1733643, 1733705), (1733809, 1733860), (1734433, 1734486), (1734661, 1734720), (1735157, 1735402), (1735514, 1735565)] 2021-10-25 09:32:57.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9579031, 9579092), (9579447, 9579510)] 2021-10-25 09:32:57.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000109: ['FBtr0089420', 'FBtr0346440', 'FBtr0346441'] 2021-10-25 09:32:57.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035265: ['FBtr0072796', 'FBtr0334076'] 2021-10-25 09:32:57.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265789: ['FBtr0342616'] 2021-10-25 09:32:57.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265789 has a single transcript. 2021-10-25 09:32:57.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051710: ['FBtr0079849', 'FBtr0335508', 'FBtr0339523'] 2021-10-25 09:32:57.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265790: ['FBtr0342617'] 2021-10-25 09:32:57.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265790 has a single transcript. 2021-10-25 09:32:57.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265791: ['FBtr0342582'] 2021-10-25 09:32:57.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265791 has a single transcript. 2021-10-25 09:32:57.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265792: ['FBtr0342585'] 2021-10-25 09:32:57.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265792 has a single transcript. 2021-10-25 09:32:57.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1884248, 1884322), (1884560, 1884690)] 2021-10-25 09:32:57.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031814: ['FBtr0079272', 'FBtr0339788', 'FBtr0329951'] 2021-10-25 09:32:57.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265793: ['FBtr0342586'] 2021-10-25 09:32:57.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265793 has a single transcript. 2021-10-25 09:32:57.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1736910, 1736964)] 2021-10-25 09:32:57.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265794: ['FBtr0342587'] 2021-10-25 09:32:57.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265794 has a single transcript. 2021-10-25 09:32:57.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265795: ['FBtr0342590'] 2021-10-25 09:32:57.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265795 has a single transcript. 2021-10-25 09:32:57.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025457: ['FBtr0085465', 'FBtr0339148'] 2021-10-25 09:32:57.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265796: ['FBtr0342589'] 2021-10-25 09:32:57.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265796 has a single transcript. 2021-10-25 09:32:57.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265797: ['FBtr0342588'] 2021-10-25 09:32:57.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265797 has a single transcript. 2021-10-25 09:32:57.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265798: ['FBtr0342597'] 2021-10-25 09:32:57.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265798 has a single transcript. 2021-10-25 09:32:57.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265799: ['FBtr0342592'] 2021-10-25 09:32:57.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9703178, 9703267), (9703181, 9703267), (9703605, 9705779), (9703605, 9704065)] 2021-10-25 09:32:57.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265799 has a single transcript. 2021-10-25 09:32:57.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265800: ['FBtr0342593'] 2021-10-25 09:32:57.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265800 has a single transcript. 2021-10-25 09:32:57.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265801: ['FBtr0342606'] 2021-10-25 09:32:57.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265801 has a single transcript. 2021-10-25 09:32:57.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29675063, 29675116)] 2021-10-25 09:32:57.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265802: ['FBtr0342599'] 2021-10-25 09:32:57.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265802 has a single transcript. 2021-10-25 09:32:57.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6450132, 6450692), (6451014, 6451617), (6451736, 6451796), (6452055, 6452121), (6453057, 6455534)] 2021-10-25 09:32:57.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035266: ['FBtr0072767', 'FBtr0072768', 'FBtr0072769', 'FBtr0072770', 'FBtr0072771', 'FBtr0345817'] 2021-10-25 09:32:57.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265803: ['FBtr0342600'] 2021-10-25 09:32:57.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265803 has a single transcript. 2021-10-25 09:32:57.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265804: ['FBtr0342601'] 2021-10-25 09:32:57.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265804 has a single transcript. 2021-10-25 09:32:57.455 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079272': ['FBtr0329951']} 2021-10-25 09:32:57.456 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329951']] 2021-10-25 09:32:57.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265805: ['FBtr0342605'] 2021-10-25 09:32:57.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265805 has a single transcript. 2021-10-25 09:32:57.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265806: ['FBtr0342627'] 2021-10-25 09:32:57.466 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265806 has a single transcript. 2021-10-25 09:32:57.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265807: ['FBtr0342626'] 2021-10-25 09:32:57.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265807 has a single transcript. 2021-10-25 09:32:57.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265808: ['FBtr0342629'] 2021-10-25 09:32:57.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265808 has a single transcript. 2021-10-25 09:32:57.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265809: ['FBtr0342630'] 2021-10-25 09:32:57.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265809 has a single transcript. 2021-10-25 09:32:57.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000114: ['FBtr0080344', 'FBtr0080345', 'FBtr0080347', 'FBtr0300567', 'FBtr0331644', 'FBtr0331645', 'FBtr0331646', 'FBtr0331647', 'FBtr0331648', 'FBtr0331998'] 2021-10-25 09:32:57.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265810: ['FBtr0342638'] 2021-10-25 09:32:57.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038606: ['FBtr0302308', 'FBtr0345256'] 2021-10-25 09:32:57.541 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265810 has a single transcript. 2021-10-25 09:32:57.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025463: ['FBtr0073741'] 2021-10-25 09:32:57.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025463 has a single transcript. 2021-10-25 09:32:57.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265811: ['FBtr0342634'] 2021-10-25 09:32:57.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025469: ['FBtr0088824', 'FBtr0310369', 'FBtr0339280'] 2021-10-25 09:32:57.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265811 has a single transcript. 2021-10-25 09:32:57.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265812: ['FBtr0342642', 'FBtr0445829'] 2021-10-25 09:32:57.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051712: ['FBtr0079896', 'FBtr0331636'] 2021-10-25 09:32:57.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031815: ['FBtr0079259', 'FBtr0079258'] 2021-10-25 09:32:57.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18331806, 18333275), (18334299, 18352724), (18353654, 18353711), (18353660, 18353711), (18355933, 18360517)] 2021-10-25 09:32:57.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15822702, 15822785)] 2021-10-25 09:32:57.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9935423, 9935485), (9935569, 9937237), (9937510, 9937657)] 2021-10-25 09:32:57.641 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9935485, 9937510, 'FBtr0331636_exon_2') contains intron (9935569, 9937237) 2021-10-25 09:32:57.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331636_exon_2'] 2021-10-25 09:32:57.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13415615, 13415874), (13415615, 13416574), (13415957, 13417535), (13415957, 13418986), (13416606, 13418986), (13416947, 13418986), (13417828, 13418986), (13419085, 13419146), (13419400, 13419463), (13420270, 13420335), (13421707, 13421838), (13422036, 13422098), (13422259, 13422319), (13422503, 13422601), (13422725, 13428711), (13422725, 13425512), (13422725, 13436202), (13422725, 13438606), (13422725, 13423913), (13426038, 13429788), (13426239, 13429755), (13438823, 13438927)] 2021-10-25 09:32:57.642 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13438606, 13439051, 'FBtr0299754_exon_1') contains intron (13438823, 13438927) 2021-10-25 09:32:57.643 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6456208, 6456364), (6456682, 6456743), (6456864, 6456920), (6457113, 6457337), (6457489, 6457539), (6457916, 6458170)] 2021-10-25 09:32:57.644 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13438606, 13439051, 'FBtr0299758_exon_1') contains intron (13438823, 13438927) 2021-10-25 09:32:57.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.645 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13438606, 13439051, 'FBtr0299759_exon_1') contains intron (13438823, 13438927) 2021-10-25 09:32:57.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.645 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13438606, 13439051, 'FBtr0299760_exon_1') contains intron (13438823, 13438927) 2021-10-25 09:32:57.648 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299754_exon_1', 'FBtr0299758_exon_1', 'FBtr0299759_exon_1', 'FBtr0299760_exon_1'] 2021-10-25 09:32:57.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8080959, 8081030), (8081206, 8081273), (8081503, 8081861), (8081939, 8082014), (8082293, 8083274), (8082293, 8082858)] 2021-10-25 09:32:57.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1738744, 1743211), (1738744, 1743207), (1739281, 1743211), (1739350, 1743207), (1742010, 1743207), (1743834, 1743903)] 2021-10-25 09:32:57.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038607: ['FBtr0083576'] 2021-10-25 09:32:57.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038607 has a single transcript. 2021-10-25 09:32:57.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038608: ['FBtr0083586', 'FBtr0339976', 'FBtr0302307'] 2021-10-25 09:32:57.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051713: ['FBtr0079895'] 2021-10-25 09:32:57.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051713 has a single transcript. 2021-10-25 09:32:57.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265813: ['FBtr0342644', 'FBtr0346421'] 2021-10-25 09:32:57.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051715: ['FBtr0079996', 'FBtr0310098'] 2021-10-25 09:32:57.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031816: ['FBtr0079271', 'FBtr0331186'] 2021-10-25 09:32:57.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10341765, 10341821), (10341932, 10342149), (10341932, 10342155), (10342233, 10342288)] 2021-10-25 09:32:57.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15810018, 15810074)] 2021-10-25 09:32:57.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025519: ['FBtr0087185'] 2021-10-25 09:32:57.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025519 has a single transcript. 2021-10-25 09:32:57.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18364765, 18364821), (18365065, 18365120), (18365345, 18365407), (18365610, 18365671), (18365613, 18365671), (18365776, 18365910), (18365976, 18366035), (18365979, 18366035)] 2021-10-25 09:32:57.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025525: ['FBtr0072639', 'FBtr0333271'] 2021-10-25 09:32:57.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6459647, 6459715), (6459994, 6460322), (6460481, 6460554), (6460716, 6463261), (6464139, 6465528), (6464139, 6465550)] 2021-10-25 09:32:57.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265814: ['FBtr0342645', 'FBtr0342646'] 2021-10-25 09:32:57.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1142921, 1143349), (1143777, 1143850), (1143780, 1143850), (1143929, 1172757), (1174607, 1176980)] 2021-10-25 09:32:57.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12175420, 12271590), (12201771, 12271590), (12206130, 12240867), (12206130, 12271590), (12222337, 12271590), (12222337, 12240867), (12241780, 12271590), (12271347, 12271590), (12272084, 12278836), (12278919, 12282513), (12282562, 12298567), (12287808, 12288904), (12289344, 12298567), (12298749, 12298813), (12299111, 12299187), (12299394, 12300360), (12299394, 12304445), (12300396, 12300609), (12300621, 12304445), (12304595, 12310681), (12311093, 12312375), (12312465, 12312525)] 2021-10-25 09:32:57.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051716: ['FBtr0080010', 'FBtr0080011', 'FBtr0080012', 'FBtr0080013', 'FBtr0080014', 'FBtr0080009', 'FBtr0304112', 'FBtr0304113', 'FBtr0331637', 'FBtr0331638', 'FBtr0331639'] 2021-10-25 09:32:57.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031817: ['FBtr0079270', 'FBtr0331185'] 2021-10-25 09:32:57.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1619970, 1620039)] 2021-10-25 09:32:57.859 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.859 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038609: ['FBtr0083577'] 2021-10-25 09:32:57.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038609 has a single transcript. 2021-10-25 09:32:57.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038610: ['FBtr0083581', 'FBtr0083582', 'FBtr0083583', 'FBtr0344550', 'FBtr0344551'] 2021-10-25 09:32:57.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025549: ['FBtr0071066', 'FBtr0346619'] 2021-10-25 09:32:57.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6466764, 6466818), (6467339, 6467398)] 2021-10-25 09:32:57.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7289264, 7289505), (7289678, 7289744), (7290395, 7290565), (7290677, 7290788), (7290677, 7290792)] 2021-10-25 09:32:57.923 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:57.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:57.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035267: ['FBtr0072773', 'FBtr0310623', 'FBtr0303104', 'FBtr0303105', 'FBtr0334072'] 2021-10-25 09:32:57.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265815: ['FBtr0342647'] 2021-10-25 09:32:57.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265815 has a single transcript. 2021-10-25 09:32:57.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265816: ['FBtr0342648'] 2021-10-25 09:32:57.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265816 has a single transcript. 2021-10-25 09:32:57.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265817: ['FBtr0342649'] 2021-10-25 09:32:57.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265817 has a single transcript. 2021-10-25 09:32:57.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265818: ['FBtr0342650'] 2021-10-25 09:32:57.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265818 has a single transcript. 2021-10-25 09:32:57.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265819: ['FBtr0342651'] 2021-10-25 09:32:57.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265819 has a single transcript. 2021-10-25 09:32:57.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265820: ['FBtr0342652'] 2021-10-25 09:32:57.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265820 has a single transcript. 2021-10-25 09:32:57.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031818: ['FBtr0079267', 'FBtr0303229'] 2021-10-25 09:32:57.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265821: ['FBtr0342657'] 2021-10-25 09:32:57.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265821 has a single transcript. 2021-10-25 09:32:57.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025558: ['FBtr0075314'] 2021-10-25 09:32:57.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025558 has a single transcript. 2021-10-25 09:32:57.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265822: ['FBtr0342659'] 2021-10-25 09:32:57.986 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265822 has a single transcript. 2021-10-25 09:32:57.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025571: ['FBtr0083456', 'FBtr0331706', 'FBtr0331707'] 2021-10-25 09:32:57.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265823: ['FBtr0342653'] 2021-10-25 09:32:57.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265823 has a single transcript. 2021-10-25 09:32:58.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265824: ['FBtr0342656'] 2021-10-25 09:32:58.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265824 has a single transcript. 2021-10-25 09:32:58.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265825: ['FBtr0342660'] 2021-10-25 09:32:58.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265825 has a single transcript. 2021-10-25 09:32:58.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18378967, 18379225), (18379364, 18380618), (18379364, 18380212), (18379364, 18381031), (18379364, 18381079), (18380354, 18381031), (18380354, 18381079)] 2021-10-25 09:32:58.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265826: ['FBtr0342662'] 2021-10-25 09:32:58.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265826 has a single transcript. 2021-10-25 09:32:58.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6474651, 6474707), (6475270, 6475445), (6475802, 6476221)] 2021-10-25 09:32:58.018 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6474437, 6475270, 'FBtr0079267_exon_3') contains intron (6474651, 6474707) 2021-10-25 09:32:58.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079267_exon_3'] 2021-10-25 09:32:58.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265827: ['FBtr0342663'] 2021-10-25 09:32:58.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265827 has a single transcript. 2021-10-25 09:32:58.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265828: ['FBtr0342661'] 2021-10-25 09:32:58.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265828 has a single transcript. 2021-10-25 09:32:58.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265829: ['FBtr0342714'] 2021-10-25 09:32:58.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265829 has a single transcript. 2021-10-25 09:32:58.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265830: ['FBtr0342623'] 2021-10-25 09:32:58.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265830 has a single transcript. 2021-10-25 09:32:58.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265831: ['FBtr0342625'] 2021-10-25 09:32:58.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265831 has a single transcript. 2021-10-25 09:32:58.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265832: ['FBtr0342664'] 2021-10-25 09:32:58.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265832 has a single transcript. 2021-10-25 09:32:58.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1748089, 1749177), (1748089, 1748293), (1749113, 1749177), (1749410, 1749470), (1749654, 1749717), (1749654, 1749720)] 2021-10-25 09:32:58.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265833: ['FBtr0342666'] 2021-10-25 09:32:58.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265833 has a single transcript. 2021-10-25 09:32:58.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265834: ['FBtr0342669'] 2021-10-25 09:32:58.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265834 has a single transcript. 2021-10-25 09:32:58.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17540803, 17540975), (17541586, 17541666), (17541801, 17543499), (17541801, 17542414), (17542490, 17543499), (17543652, 17543722)] 2021-10-25 09:32:58.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265835: ['FBtr0342671'] 2021-10-25 09:32:58.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265835 has a single transcript. 2021-10-25 09:32:58.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265836: ['FBtr0342672'] 2021-10-25 09:32:58.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265836 has a single transcript. 2021-10-25 09:32:58.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031820: ['FBtr0079260', 'FBtr0344764'] 2021-10-25 09:32:58.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265837: ['FBtr0342670'] 2021-10-25 09:32:58.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265837 has a single transcript. 2021-10-25 09:32:58.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265838: ['FBtr0342665'] 2021-10-25 09:32:58.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265838 has a single transcript. 2021-10-25 09:32:58.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265839: ['FBtr0342668'] 2021-10-25 09:32:58.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265839 has a single transcript. 2021-10-25 09:32:58.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265840: ['FBtr0342682'] 2021-10-25 09:32:58.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265840 has a single transcript. 2021-10-25 09:32:58.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265841: ['FBtr0342686'] 2021-10-25 09:32:58.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265841 has a single transcript. 2021-10-25 09:32:58.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265842: ['FBtr0342683'] 2021-10-25 09:32:58.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265842 has a single transcript. 2021-10-25 09:32:58.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10396849, 10396912), (10396849, 10398034), (10396921, 10398034), (10396982, 10398034), (10397474, 10398034), (10397647, 10398034), (10398219, 10398278), (10398392, 10398443), (10398593, 10398653), (10398740, 10399316), (10398749, 10399316), (10399535, 10399594), (10399676, 10399767), (10399688, 10399767), (10399712, 10399767), (10400679, 10400734), (10400869, 10400962), (10400998, 10401076), (10401271, 10401333), (10401594, 10401661), (10401741, 10401803), (10401867, 10401925), (10402333, 10402406), (10402562, 10402630)] 2021-10-25 09:32:58.125 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396921, 'FBtr0080012_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.126 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396982, 'FBtr0080009_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.126 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396982, 'FBtr0304112_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265843: ['FBtr0342684'] 2021-10-25 09:32:58.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265843 has a single transcript. 2021-10-25 09:32:58.127 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396982, 'FBtr0304113_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.127 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396982, 'FBtr0331638_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.128 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10396715, 10396982, 'FBtr0331639_exon_1') contains intron (10396849, 10396912) 2021-10-25 09:32:58.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080012_exon_1', 'FBtr0080009_exon_1', 'FBtr0304112_exon_1', 'FBtr0304113_exon_1', 'FBtr0331638_exon_1', 'FBtr0331639_exon_1'] 2021-10-25 09:32:58.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6481250, 6481982), (6486111, 6486171), (6486352, 6486490)] 2021-10-25 09:32:58.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265844: ['FBtr0342685'] 2021-10-25 09:32:58.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265844 has a single transcript. 2021-10-25 09:32:58.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265845: ['FBtr0342689'] 2021-10-25 09:32:58.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265845 has a single transcript. 2021-10-25 09:32:58.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265846: ['FBtr0342687'] 2021-10-25 09:32:58.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265846 has a single transcript. 2021-10-25 09:32:58.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265847: ['FBtr0342688'] 2021-10-25 09:32:58.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265847 has a single transcript. 2021-10-25 09:32:58.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265849: ['FBtr0342674'] 2021-10-25 09:32:58.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265849 has a single transcript. 2021-10-25 09:32:58.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265850: ['FBtr0342675'] 2021-10-25 09:32:58.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265850 has a single transcript. 2021-10-25 09:32:58.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265851: ['FBtr0342676'] 2021-10-25 09:32:58.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265851 has a single transcript. 2021-10-25 09:32:58.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265852: ['FBtr0342677'] 2021-10-25 09:32:58.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265852 has a single transcript. 2021-10-25 09:32:58.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265853: ['FBtr0342678'] 2021-10-25 09:32:58.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265853 has a single transcript. 2021-10-25 09:32:58.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025573: ['FBtr0071734'] 2021-10-25 09:32:58.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025573 has a single transcript. 2021-10-25 09:32:58.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031821: ['FBtr0079265', 'FBtr0339785'] 2021-10-25 09:32:58.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265854: ['FBtr0342698'] 2021-10-25 09:32:58.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265854 has a single transcript. 2021-10-25 09:32:58.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265855: ['FBtr0342697'] 2021-10-25 09:32:58.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265855 has a single transcript. 2021-10-25 09:32:58.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025574: ['FBtr0084527', 'FBtr0112907'] 2021-10-25 09:32:58.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265856: ['FBtr0342692'] 2021-10-25 09:32:58.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265856 has a single transcript. 2021-10-25 09:32:58.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265857: ['FBtr0342693'] 2021-10-25 09:32:58.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265857 has a single transcript. 2021-10-25 09:32:58.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038611: ['FBtr0083580'] 2021-10-25 09:32:58.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038611 has a single transcript. 2021-10-25 09:32:58.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265858: ['FBtr0342694'] 2021-10-25 09:32:58.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265858 has a single transcript. 2021-10-25 09:32:58.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038612: ['FBtr0083624'] 2021-10-25 09:32:58.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038612 has a single transcript. 2021-10-25 09:32:58.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265859: ['FBtr0342695'] 2021-10-25 09:32:58.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265859 has a single transcript. 2021-10-25 09:32:58.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038613: ['FBtr0083658'] 2021-10-25 09:32:58.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038613 has a single transcript. 2021-10-25 09:32:58.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265860: ['FBtr0342696'] 2021-10-25 09:32:58.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265860 has a single transcript. 2021-10-25 09:32:58.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038617: ['FBtr0083655'] 2021-10-25 09:32:58.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038617 has a single transcript. 2021-10-25 09:32:58.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265861: ['FBtr0342699'] 2021-10-25 09:32:58.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265861 has a single transcript. 2021-10-25 09:32:58.243 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6488372, 6488424)] 2021-10-25 09:32:58.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038619: ['FBtr0083630', 'FBtr0333830'] 2021-10-25 09:32:58.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265862: ['FBtr0342700'] 2021-10-25 09:32:58.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265862 has a single transcript. 2021-10-25 09:32:58.245 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265863: ['FBtr0342707'] 2021-10-25 09:32:58.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265863 has a single transcript. 2021-10-25 09:32:58.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23861505, 23861576), (23861754, 23861814), (23861968, 23862030), (23862129, 23862193), (23862382, 23862449), (23862641, 23862982), (23863214, 23865562), (23865655, 23889056), (23889119, 23889693), (23889191, 23889693)] 2021-10-25 09:32:58.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.253 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265864: ['FBtr0342703'] 2021-10-25 09:32:58.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265864 has a single transcript. 2021-10-25 09:32:58.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265865: ['FBtr0342708'] 2021-10-25 09:32:58.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265865 has a single transcript. 2021-10-25 09:32:58.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265866: ['FBtr0342709'] 2021-10-25 09:32:58.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265866 has a single transcript. 2021-10-25 09:32:58.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265868: ['FBtr0342713'] 2021-10-25 09:32:58.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265868 has a single transcript. 2021-10-25 09:32:58.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265869: ['FBtr0342715'] 2021-10-25 09:32:58.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265869 has a single transcript. 2021-10-25 09:32:58.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035268: ['FBtr0072774', 'FBtr0300292', 'FBtr0334073', 'FBtr0334074'] 2021-10-25 09:32:58.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18405159, 18405219), (18405159, 18405237), (18405425, 18405488)] 2021-10-25 09:32:58.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265870: ['FBtr0342719'] 2021-10-25 09:32:58.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265870 has a single transcript. 2021-10-25 09:32:58.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000115: ['FBtr0075517'] 2021-10-25 09:32:58.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000115 has a single transcript. 2021-10-25 09:32:58.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265871: ['FBtr0342720'] 2021-10-25 09:32:58.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265871 has a single transcript. 2021-10-25 09:32:58.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259222: ['FBtr0305057', 'FBtr0305058', 'FBtr0299768', 'FBtr0299771', 'FBtr0299772', 'FBtr0345263'] 2021-10-25 09:32:58.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265872: ['FBtr0342723'] 2021-10-25 09:32:58.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265872 has a single transcript. 2021-10-25 09:32:58.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000116: ['FBtr0076543', 'FBtr0076544', 'FBtr0076545', 'FBtr0076546', 'FBtr0112791', 'FBtr0345030', 'FBtr0331550'] 2021-10-25 09:32:58.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265873: ['FBtr0342724'] 2021-10-25 09:32:58.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265873 has a single transcript. 2021-10-25 09:32:58.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031822: ['FBtr0079264'] 2021-10-25 09:32:58.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031822 has a single transcript. 2021-10-25 09:32:58.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265874: ['FBtr0342725'] 2021-10-25 09:32:58.316 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265874 has a single transcript. 2021-10-25 09:32:58.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025578: ['FBtr0072430'] 2021-10-25 09:32:58.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025578 has a single transcript. 2021-10-25 09:32:58.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265875: ['FBtr0342726'] 2021-10-25 09:32:58.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265875 has a single transcript. 2021-10-25 09:32:58.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031824: ['FBtr0079263'] 2021-10-25 09:32:58.324 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031824 has a single transcript. 2021-10-25 09:32:58.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025582: ['FBtr0075345'] 2021-10-25 09:32:58.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025582 has a single transcript. 2021-10-25 09:32:58.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265876: ['FBtr0345680', 'FBtr0342790'] 2021-10-25 09:32:58.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031826: ['FBtr0079286'] 2021-10-25 09:32:58.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031826 has a single transcript. 2021-10-25 09:32:58.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025583: ['FBtr0086664'] 2021-10-25 09:32:58.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025583 has a single transcript. 2021-10-25 09:32:58.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031829: ['FBtr0079333'] 2021-10-25 09:32:58.338 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031829 has a single transcript. 2021-10-25 09:32:58.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025592: ['FBtr0072529', 'FBtr0072530'] 2021-10-25 09:32:58.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031830: ['FBtr0079288', 'FBtr0343157'] 2021-10-25 09:32:58.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038621: ['FBtr0083654'] 2021-10-25 09:32:58.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038621 has a single transcript. 2021-10-25 09:32:58.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038626: ['FBtr0083631'] 2021-10-25 09:32:58.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038626 has a single transcript. 2021-10-25 09:32:58.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038627: ['FBtr0083632', 'FBtr0290211', 'FBtr0344291'] 2021-10-25 09:32:58.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:58.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1756536, 1756611), (1757203, 1757321), (1757203, 1757306), (1758146, 1758206), (1758349, 1758413), (1758654, 1758715)] 2021-10-25 09:32:58.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.388 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6557984, 6558417), (6558591, 6558938)] 2021-10-25 09:32:58.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(202429, 202488), (203619, 205367), (205472, 205664)] 2021-10-25 09:32:58.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.389 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (205367, 205844, 'FBtr0072529_exon_1') contains intron (205472, 205664) 2021-10-25 09:32:58.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072529_exon_1'] 2021-10-25 09:32:58.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265877: ['FBtr0342792'] 2021-10-25 09:32:58.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265877 has a single transcript. 2021-10-25 09:32:58.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18573525, 18577566), (18577584, 18590116), (18584586, 18590116), (18590427, 18590520)] 2021-10-25 09:32:58.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20740324, 20746774), (20740337, 20746774), (20740365, 20746774), (20747303, 20747363), (20747772, 20747836), (20748015, 20749247), (20749376, 20749468), (20749658, 20749740), (20749830, 20750224), (20750354, 20750687), (20750354, 20752345), (20750757, 20752345), (20750757, 20754968), (20752375, 20754968), (20752375, 20753508), (20753759, 20753968), (20753759, 20754968), (20754261, 20754968)] 2021-10-25 09:32:58.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265878: ['FBtr0342793'] 2021-10-25 09:32:58.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265878 has a single transcript. 2021-10-25 09:32:58.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031831: ['FBtr0079289'] 2021-10-25 09:32:58.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031831 has a single transcript. 2021-10-25 09:32:58.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265879: ['FBtr0342747'] 2021-10-25 09:32:58.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265879 has a single transcript. 2021-10-25 09:32:58.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265880: ['FBtr0342748'] 2021-10-25 09:32:58.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265880 has a single transcript. 2021-10-25 09:32:58.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031832: ['FBtr0079332', 'FBtr0343162', 'FBtr0343163'] 2021-10-25 09:32:58.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265881: ['FBtr0342750'] 2021-10-25 09:32:58.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265881 has a single transcript. 2021-10-25 09:32:58.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265882: ['FBtr0342749'] 2021-10-25 09:32:58.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265882 has a single transcript. 2021-10-25 09:32:58.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025595: ['FBtr0079308', 'FBtr0079309', 'FBtr0079310', 'FBtr0332331'] 2021-10-25 09:32:58.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265883: ['FBtr0342751'] 2021-10-25 09:32:58.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265883 has a single transcript. 2021-10-25 09:32:58.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265884: ['FBtr0342752', 'FBtr0342753'] 2021-10-25 09:32:58.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9050359, 9051129), (9050359, 9061906), (9050359, 9064463), (9050359, 9057542), (9051717, 9053519), (9062467, 9064463), (9062467, 9062811), (9064517, 9065707)] 2021-10-25 09:32:58.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6560516, 6560576), (6561635, 6562025), (6562112, 6562208)] 2021-10-25 09:32:58.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18478910, 18478959)] 2021-10-25 09:32:58.527 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18478821, 18479223, 'FBtr0342753_exon_1') contains intron (18478910, 18478959) 2021-10-25 09:32:58.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342753_exon_1'] 2021-10-25 09:32:58.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038629: ['FBtr0083639', 'FBtr0114497', 'FBtr0305957'] 2021-10-25 09:32:58.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035270: ['FBtr0072792', 'FBtr0332881'] 2021-10-25 09:32:58.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6711742, 6712337), (6711742, 6712346), (6712675, 6712739), (6713228, 6713365), (6713465, 6713574), (6713847, 6714554), (6714767, 6715168), (6714767, 6716025), (6715323, 6716025)] 2021-10-25 09:32:58.576 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6711285, 6712675, 'FBtr0079309_exon_7') contains intron (6711742, 6712337) 2021-10-25 09:32:58.577 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6714554, 6715323, 'FBtr0332331_exon_2') contains intron (6714767, 6715168) 2021-10-25 09:32:58.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079309_exon_7', 'FBtr0332331_exon_2'] 2021-10-25 09:32:58.578 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1773369, 1773422), (1773523, 1773577), (1773526, 1773577), (1773910, 1773980)] 2021-10-25 09:32:58.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.604 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265885: ['FBtr0345003', 'FBtr0342754', 'FBtr0342755'] 2021-10-25 09:32:58.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18593573, 18593631), (18593774, 18593841), (18594047, 18594099), (18594884, 18597102), (18594884, 18595201), (18595783, 18597102), (18597677, 18597956), (18598468, 18620355), (18620506, 18621248)] 2021-10-25 09:32:58.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031834: ['FBtr0079330', 'FBtr0343161'] 2021-10-25 09:32:58.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035271: ['FBtr0072791'] 2021-10-25 09:32:58.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035271 has a single transcript. 2021-10-25 09:32:58.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:58.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051717: ['FBtr0079977', 'FBtr0333409'] 2021-10-25 09:32:58.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18707994, 18708301), (18708189, 18708301), (18708205, 18708301)] 2021-10-25 09:32:58.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035272: ['FBtr0072776'] 2021-10-25 09:32:58.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035272 has a single transcript. 2021-10-25 09:32:58.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035273: ['FBtr0072778'] 2021-10-25 09:32:58.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035273 has a single transcript. 2021-10-25 09:32:58.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259223: ['FBtr0299774', 'FBtr0299776'] 2021-10-25 09:32:58.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035279: ['FBtr0299560', 'FBtr0299561'] 2021-10-25 09:32:58.712 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10250827, 10250895)] 2021-10-25 09:32:58.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038630: ['FBtr0083634', 'FBtr0083636', 'FBtr0305956'] 2021-10-25 09:32:58.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025608: ['FBtr0081126', 'FBtr0343115'] 2021-10-25 09:32:58.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18422493, 18423493), (18423761, 18426270), (18423761, 18424218), (18424542, 18426270), (18426376, 18426447)] 2021-10-25 09:32:58.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1824704, 1825054), (1825207, 1831667), (1825207, 1828815)] 2021-10-25 09:32:58.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031835: ['FBtr0089641', 'FBtr0343159', 'FBtr0343160'] 2021-10-25 09:32:58.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18706739, 18706796), (18707861, 18708115)] 2021-10-25 09:32:58.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.784 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051718: ['FBtr0336967', 'FBtr0336968'] 2021-10-25 09:32:58.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000117: ['FBtr0089990', 'FBtr0089991', 'FBtr0089992', 'FBtr0089989', 'FBtr0089988', 'FBtr0332583'] 2021-10-25 09:32:58.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265886: ['FBtr0342756'] 2021-10-25 09:32:58.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265886 has a single transcript. 2021-10-25 09:32:58.805 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18598794, 18598873), (18598852, 18598913)] 2021-10-25 09:32:58.806 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18598690, 18600097, 'FBtr0083636_exon_1') contains intron (18598794, 18598873) 2021-10-25 09:32:58.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083636_exon_1'] 2021-10-25 09:32:58.807 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035280: ['FBtr0072786', 'FBtr0299562', 'FBtr0332875'] 2021-10-25 09:32:58.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265887: ['FBtr0342758'] 2021-10-25 09:32:58.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265887 has a single transcript. 2021-10-25 09:32:58.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6568865, 6572195), (6572542, 6573698), (6572542, 6574015), (6573805, 6574015), (6574320, 6574397), (6575455, 6575612), (6575727, 6575848), (6575963, 6576040), (6576164, 6576252), (6576366, 6576846), (6577090, 6577377), (6577589, 6577652), (6577780, 6578904), (6578999, 6579266), (6579381, 6580414), (6580510, 6586500), (6587143, 6600610)] 2021-10-25 09:32:58.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265888: ['FBtr0342759'] 2021-10-25 09:32:58.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265888 has a single transcript. 2021-10-25 09:32:58.818 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6568399, 6572542, 'FBtr0343160_exon_15') contains intron (6568865, 6572195) 2021-10-25 09:32:58.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343160_exon_15'] 2021-10-25 09:32:58.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259224: ['FBtr0330142', 'FBtr0334632', 'FBtr0334633', 'FBtr0334634', 'FBtr0334635', 'FBtr0334636'] 2021-10-25 09:32:58.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265889: ['FBtr0342760'] 2021-10-25 09:32:58.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265889 has a single transcript. 2021-10-25 09:32:58.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265890: ['FBtr0342761'] 2021-10-25 09:32:58.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265890 has a single transcript. 2021-10-25 09:32:58.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265891: ['FBtr0342776'] 2021-10-25 09:32:58.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265891 has a single transcript. 2021-10-25 09:32:58.839 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10405899, 10405952), (10406437, 10406498), (10407302, 10407363), (10407650, 10407845), (10407985, 10408045)] 2021-10-25 09:32:58.841 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10407845, 10408197, 'FBtr0336968_exon_5') contains intron (10407985, 10408045) 2021-10-25 09:32:58.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336968_exon_5'] 2021-10-25 09:32:58.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265892: ['FBtr0342777'] 2021-10-25 09:32:58.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265892 has a single transcript. 2021-10-25 09:32:58.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265893: ['FBtr0342778'] 2021-10-25 09:32:58.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265893 has a single transcript. 2021-10-25 09:32:58.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025612: ['FBtr0070692'] 2021-10-25 09:32:58.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025612 has a single transcript. 2021-10-25 09:32:58.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265894: ['FBtr0342780', 'FBtr0342781'] 2021-10-25 09:32:58.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025613: ['FBtr0070693', 'FBtr0343629'] 2021-10-25 09:32:58.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1832994, 1834288), (1834528, 1834586), (1834683, 1834868), (1835017, 1835083), (1835017, 1835105)] 2021-10-25 09:32:58.884 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1834868, 1835164, 'FBtr0299562_exon_1') contains intron (1835017, 1835083) 2021-10-25 09:32:58.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299562_exon_1'] 2021-10-25 09:32:58.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20627573, 20627955)] 2021-10-25 09:32:58.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4641063, 4641832), (4642142, 4642193), (4642330, 4643713)] 2021-10-25 09:32:58.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051719: ['FBtr0080039', 'FBtr0080040', 'FBtr0080041', 'FBtr0337008'] 2021-10-25 09:32:58.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038631: ['FBtr0083694'] 2021-10-25 09:32:58.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038631 has a single transcript. 2021-10-25 09:32:58.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1892119, 1893402), (1892119, 1894507), (1893499, 1894507), (1894780, 1894840), (1895041, 1895113), (1896753, 1898979), (1899039, 1899303), (1899039, 1899398), (1899039, 1900509), (1899039, 1900043), (1899039, 1899380)] 2021-10-25 09:32:58.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.939 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038632: ['FBtr0290199'] 2021-10-25 09:32:58.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038632 has a single transcript. 2021-10-25 09:32:58.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031836: ['FBtr0079291', 'FBtr0079292', 'FBtr0079293'] 2021-10-25 09:32:58.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038638: ['FBtr0083664', 'FBtr0083665'] 2021-10-25 09:32:58.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3472707, 3485843), (3485743, 3485843), (3486278, 3504719), (3504803, 3504887), (3505086, 3506074), (3505092, 3506074), (3507207, 3507297)] 2021-10-25 09:32:58.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265895: ['FBtr0342782'] 2021-10-25 09:32:58.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265895 has a single transcript. 2021-10-25 09:32:58.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265896: ['FBtr0342779'] 2021-10-25 09:32:58.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265896 has a single transcript. 2021-10-25 09:32:58.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025615: ['FBtr0070690', 'FBtr0345715'] 2021-10-25 09:32:58.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265897: ['FBtr0342762'] 2021-10-25 09:32:58.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265897 has a single transcript. 2021-10-25 09:32:58.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18669562, 18671137), (18669698, 18671137), (18671374, 18672821)] 2021-10-25 09:32:58.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035281: ['FBtr0072869', 'FBtr0332673'] 2021-10-25 09:32:58.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:58.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:58.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265898: ['FBtr0342763'] 2021-10-25 09:32:58.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265898 has a single transcript. 2021-10-25 09:32:59.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265899: ['FBtr0342774'] 2021-10-25 09:32:59.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10463885, 10463937), (10464254, 10464316), (10464544, 10464621), (10464812, 10464873), (10465094, 10465288), (10465094, 10465935), (10465376, 10465935), (10466158, 10466214), (10466302, 10466357), (10466450, 10471475), (10472215, 10474281), (10472326, 10474281), (10472485, 10474281), (10472485, 10474147)] 2021-10-25 09:32:59.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265899 has a single transcript. 2021-10-25 09:32:59.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6611268, 6612484), (6611611, 6612484), (6611775, 6612484), (6612640, 6612780), (6613278, 6615858), (6616152, 6616213)] 2021-10-25 09:32:59.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265900: ['FBtr0342775'] 2021-10-25 09:32:59.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265900 has a single transcript. 2021-10-25 09:32:59.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265901: ['FBtr0342773'] 2021-10-25 09:32:59.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265901 has a single transcript. 2021-10-25 09:32:59.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265902: ['FBtr0342785'] 2021-10-25 09:32:59.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265902 has a single transcript. 2021-10-25 09:32:59.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265903: ['FBtr0342804'] 2021-10-25 09:32:59.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265903 has a single transcript. 2021-10-25 09:32:59.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265904: ['FBtr0342828'] 2021-10-25 09:32:59.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265904 has a single transcript. 2021-10-25 09:32:59.037 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1841187, 1841760), (1841892, 1841989)] 2021-10-25 09:32:59.038 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.038 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265905: ['FBtr0342829'] 2021-10-25 09:32:59.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265905 has a single transcript. 2021-10-25 09:32:59.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4649514, 4649572)] 2021-10-25 09:32:59.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265906: ['FBtr0342830'] 2021-10-25 09:32:59.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265906 has a single transcript. 2021-10-25 09:32:59.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038639: ['FBtr0083689', 'FBtr0083688'] 2021-10-25 09:32:59.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265907: ['FBtr0342831'] 2021-10-25 09:32:59.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265907 has a single transcript. 2021-10-25 09:32:59.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265908: ['FBtr0342832'] 2021-10-25 09:32:59.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265908 has a single transcript. 2021-10-25 09:32:59.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265909: ['FBtr0342833'] 2021-10-25 09:32:59.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265909 has a single transcript. 2021-10-25 09:32:59.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265910: ['FBtr0342834'] 2021-10-25 09:32:59.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265910 has a single transcript. 2021-10-25 09:32:59.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265911: ['FBtr0342835'] 2021-10-25 09:32:59.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265911 has a single transcript. 2021-10-25 09:32:59.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265912: ['FBtr0342836'] 2021-10-25 09:32:59.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265912 has a single transcript. 2021-10-25 09:32:59.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265913: ['FBtr0342827'] 2021-10-25 09:32:59.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265913 has a single transcript. 2021-10-25 09:32:59.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031837: ['FBtr0113026'] 2021-10-25 09:32:59.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031837 has a single transcript. 2021-10-25 09:32:59.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265914: ['FBtr0342840'] 2021-10-25 09:32:59.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265914 has a single transcript. 2021-10-25 09:32:59.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18676235, 18676629), (18676831, 18676889), (18677296, 18677364), (18677412, 18677478)] 2021-10-25 09:32:59.099 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18674625, 18677296, 'FBtr0083689_exon_3') contains intron (18676235, 18676629) 2021-10-25 09:32:59.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083689_exon_3'] 2021-10-25 09:32:59.099 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265915: ['FBtr0342841'] 2021-10-25 09:32:59.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265915 has a single transcript. 2021-10-25 09:32:59.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031842: ['FBtr0079295', 'FBtr0343864', 'FBtr0303224'] 2021-10-25 09:32:59.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265916: ['FBtr0342844'] 2021-10-25 09:32:59.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265916 has a single transcript. 2021-10-25 09:32:59.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035282: ['FBtr0303155', 'FBtr0300713', 'FBtr0332672'] 2021-10-25 09:32:59.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025616: ['FBtr0070145'] 2021-10-25 09:32:59.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025616 has a single transcript. 2021-10-25 09:32:59.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265917: ['FBtr0344629'] 2021-10-25 09:32:59.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265917 has a single transcript. 2021-10-25 09:32:59.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265918: ['FBtr0342847'] 2021-10-25 09:32:59.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265918 has a single transcript. 2021-10-25 09:32:59.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025620: ['FBtr0070147'] 2021-10-25 09:32:59.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025620 has a single transcript. 2021-10-25 09:32:59.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265919: ['FBtr0342849'] 2021-10-25 09:32:59.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265919 has a single transcript. 2021-10-25 09:32:59.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025621: ['FBtr0070140', 'FBtr0343325'] 2021-10-25 09:32:59.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265920: ['FBtr0342851', 'FBtr0347506'] 2021-10-25 09:32:59.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038640: ['FBtr0083667'] 2021-10-25 09:32:59.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038640 has a single transcript. 2021-10-25 09:32:59.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051720: ['FBtr0301973', 'FBtr0301974'] 2021-10-25 09:32:59.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:59.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038641: ['FBtr0083668', 'FBtr0083669'] 2021-10-25 09:32:59.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4494580, 4494651), (4495059, 4495120)] 2021-10-25 09:32:59.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1851418, 1851661), (1851418, 1851484), (1851496, 1851661), (1851971, 1852051), (1852246, 1854712)] 2021-10-25 09:32:59.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6649680, 6649786), (6651895, 6652007), (6652426, 6652496), (6652444, 6652496), (6652629, 6652752), (6653377, 6653434), (6653536, 6653594)] 2021-10-25 09:32:59.189 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.189 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000119: ['FBtr0087702'] 2021-10-25 09:32:59.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000119 has a single transcript. 2021-10-25 09:32:59.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000120: ['FBtr0081030', 'FBtr0307350', 'FBtr0340229'] 2021-10-25 09:32:59.221 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10234950, 10235027), (10235414, 10235484), (10235663, 10235726), (10235805, 10236030), (10236286, 10236374), (10236291, 10236374), (10236547, 10236926)] 2021-10-25 09:32:59.221 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18681336, 18682346), (18682713, 18682788), (18683373, 18683503), (18683825, 18683902), (18684175, 18684271)] 2021-10-25 09:32:59.222 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025624: ['FBtr0070375'] 2021-10-25 09:32:59.235 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025624 has a single transcript. 2021-10-25 09:32:59.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265921: ['FBtr0342853'] 2021-10-25 09:32:59.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265921 has a single transcript. 2021-10-25 09:32:59.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025625: ['FBtr0070340'] 2021-10-25 09:32:59.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025625 has a single transcript. 2021-10-25 09:32:59.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259226: ['FBtr0299788', 'FBtr0339346'] 2021-10-25 09:32:59.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025626: ['FBtr0070339'] 2021-10-25 09:32:59.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025626 has a single transcript. 2021-10-25 09:32:59.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265922: ['FBtr0342860', 'FBtr0346385'] 2021-10-25 09:32:59.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025627: ['FBtr0070328'] 2021-10-25 09:32:59.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025627 has a single transcript. 2021-10-25 09:32:59.265 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18078496, 18078915), (18078797, 18078915), (18079723, 18079956), (18080086, 18080146)] 2021-10-25 09:32:59.266 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.266 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025628: ['FBtr0070334', 'FBtr0070335', 'FBtr0070336', 'FBtr0070337', 'FBtr0300254', 'FBtr0300255', 'FBtr0302435'] 2021-10-25 09:32:59.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038642: ['FBtr0083687', 'FBtr0345269'] 2021-10-25 09:32:59.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051721: ['FBtr0080096', 'FBtr0304114'] 2021-10-25 09:32:59.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031844: ['FBtr0079323', 'FBtr0333517'] 2021-10-25 09:32:59.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8573999, 8574076), (8574260, 8574588), (8574794, 8574856), (8575004, 8575067), (8575385, 8575474), (8575816, 8576184), (8577387, 8578124), (8577387, 8580835), (8580910, 8581022), (8582086, 8582183), (8582319, 8583494), (8584098, 8584165), (8584310, 8584592)] 2021-10-25 09:32:59.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21584050, 21584121)] 2021-10-25 09:32:59.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.297 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21583801, 21584575, 'FBtr0346385_exon_1') contains intron (21584050, 21584121) 2021-10-25 09:32:59.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346385_exon_1'] 2021-10-25 09:32:59.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18690378, 18690854), (18690381, 18690854), (18690928, 18692285), (18692378, 18692601)] 2021-10-25 09:32:59.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035283: ['FBtr0072832', 'FBtr0072833', 'FBtr0303152'] 2021-10-25 09:32:59.320 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10546300, 10619879), (10619975, 10620043), (10620175, 10620304), (10620406, 10620475), (10620635, 10622696), (10620635, 10621419), (10621452, 10622696), (10622836, 10623127), (10623266, 10625109), (10625343, 10626692)] 2021-10-25 09:32:59.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.333 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6663067, 6663127), (6663067, 6663131), (6663374, 6663435)] 2021-10-25 09:32:59.334 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259227: ['FBtr0299789'] 2021-10-25 09:32:59.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259227 has a single transcript. 2021-10-25 09:32:59.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265923: ['FBtr0342861'] 2021-10-25 09:32:59.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265923 has a single transcript. 2021-10-25 09:32:59.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265924: ['FBtr0342863'] 2021-10-25 09:32:59.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265924 has a single transcript. 2021-10-25 09:32:59.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000121: ['FBtr0076599'] 2021-10-25 09:32:59.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000121 has a single transcript. 2021-10-25 09:32:59.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265925: ['FBtr0342867'] 2021-10-25 09:32:59.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265925 has a single transcript. 2021-10-25 09:32:59.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259228: ['FBtr0340087', 'FBtr0299791', 'FBtr0299792', 'FBtr0299793', 'FBtr0299794', 'FBtr0299795', 'FBtr0300526', 'FBtr0334967', 'FBtr0334968', 'FBtr0334969'] 2021-10-25 09:32:59.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038643: ['FBtr0100288'] 2021-10-25 09:32:59.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038643 has a single transcript. 2021-10-25 09:32:59.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265926: ['FBtr0342866'] 2021-10-25 09:32:59.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265926 has a single transcript. 2021-10-25 09:32:59.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000137: ['FBtr0070075'] 2021-10-25 09:32:59.381 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000137 has a single transcript. 2021-10-25 09:32:59.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265927: ['FBtr0342865'] 2021-10-25 09:32:59.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265927 has a single transcript. 2021-10-25 09:32:59.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038645: ['FBtr0083686'] 2021-10-25 09:32:59.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038645 has a single transcript. 2021-10-25 09:32:59.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1857403, 1857512), (1857403, 1857464), (1857403, 1857509)] 2021-10-25 09:32:59.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265928: ['FBtr0342864'] 2021-10-25 09:32:59.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265928 has a single transcript. 2021-10-25 09:32:59.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000139: ['FBtr0084659', 'FBtr0084660', 'FBtr0306171'] 2021-10-25 09:32:59.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038646: ['FBtr0083685'] 2021-10-25 09:32:59.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038646 has a single transcript. 2021-10-25 09:32:59.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031848: ['FBtr0079319', 'FBtr0333349'] 2021-10-25 09:32:59.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265929: ['FBtr0342868'] 2021-10-25 09:32:59.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265929 has a single transcript. 2021-10-25 09:32:59.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038647: ['FBtr0083673'] 2021-10-25 09:32:59.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038647 has a single transcript. 2021-10-25 09:32:59.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265930: ['FBtr0342862'] 2021-10-25 09:32:59.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265930 has a single transcript. 2021-10-25 09:32:59.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051729: ['FBtr0080461', 'FBtr0080462', 'FBtr0344140', 'FBtr0344851'] 2021-10-25 09:32:59.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038649: ['FBtr0083682'] 2021-10-25 09:32:59.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038649 has a single transcript. 2021-10-25 09:32:59.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265931: ['FBtr0342875'] 2021-10-25 09:32:59.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265931 has a single transcript. 2021-10-25 09:32:59.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038651: ['FBtr0305051', 'FBtr0273382'] 2021-10-25 09:32:59.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265932: ['FBtr0343037'] 2021-10-25 09:32:59.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265932 has a single transcript. 2021-10-25 09:32:59.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2068423, 2070466), (2068423, 2071359), (2071580, 2072549), (2071580, 2071638), (2071580, 2073116), (2071580, 2071839), (2071580, 2073376)] 2021-10-25 09:32:59.417 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2071359, 2071836, 'FBtr0070335_exon_1') contains intron (2071580, 2071638) 2021-10-25 09:32:59.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070335_exon_1'] 2021-10-25 09:32:59.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265933: ['FBtr0343035'] 2021-10-25 09:32:59.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265933 has a single transcript. 2021-10-25 09:32:59.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265934: ['FBtr0343036'] 2021-10-25 09:32:59.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265934 has a single transcript. 2021-10-25 09:32:59.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:32:59.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265935: ['FBtr0086207', 'FBtr0086208', 'FBtr0086209', 'FBtr0336653', 'FBtr0336654', 'FBtr0336655', 'FBtr0336656'] 2021-10-25 09:32:59.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18750884, 18750943), (18751519, 18751577), (18751898, 18751961), (18752670, 18752730), (18753487, 18753542), (18753999, 18754061), (18755029, 18755098), (18755276, 18755340), (18755484, 18755541), (18756756, 18756818), (18757046, 18757104), (18757565, 18757627), (18757913, 18757967), (18758689, 18758740), (18758692, 18758740)] 2021-10-25 09:32:59.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.466 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24650344, 24650404), (24650589, 24650649), (24650994, 24651860), (24651251, 24651860), (24651630, 24651860), (24652241, 24652309), (24652590, 24652781), (24653039, 24653097)] 2021-10-25 09:32:59.467 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031849: ['FBtr0079315'] 2021-10-25 09:32:59.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031849 has a single transcript. 2021-10-25 09:32:59.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031850: ['FBtr0079311', 'FBtr0079312', 'FBtr0079313', 'FBtr0079314', 'FBtr0114488', 'FBtr0114489', 'FBtr0336751'] 2021-10-25 09:32:59.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13291291, 13297618), (13295823, 13297618), (13296745, 13297618), (13298456, 13298558), (13299333, 13299394), (13300739, 13300800), (13300874, 13300931)] 2021-10-25 09:32:59.513 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035285: ['FBtr0072834', 'FBtr0332668', 'FBtr0345381'] 2021-10-25 09:32:59.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038652: ['FBtr0083678', 'FBtr0083679', 'FBtr0301199', 'FBtr0301200', 'FBtr0301201', 'FBtr0339167'] 2021-10-25 09:32:59.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000140: ['FBtr0084692'] 2021-10-25 09:32:59.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000140 has a single transcript. 2021-10-25 09:32:59.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000146: ['FBtr0080165', 'FBtr0112793'] 2021-10-25 09:32:59.589 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1865917, 1867140)] 2021-10-25 09:32:59.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6863289, 6863347), (6863533, 6864277), (6863554, 6864277), (6864571, 6864635), (6865049, 6865107), (6865374, 6866686), (6865374, 6865866), (6865884, 6866686), (6866941, 6872533), (6866941, 6867072), (6866941, 6867566), (6866941, 6867481), (6866941, 6872554), (6866941, 6866996)] 2021-10-25 09:32:59.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6782486, 6782560), (6782692, 6782769), (6782895, 6782962), (6783532, 6783609), (6783778, 6783889), (6784554, 6784623), (6784735, 6786155), (6784735, 6785510), (6785663, 6786155), (6786812, 6787095), (6786812, 6787350), (6787248, 6787350), (6787266, 6787350), (6787520, 6787589), (6788125, 6788202), (6788393, 6788460), (6789051, 6789711), (6789051, 6791767), (6789051, 6795351), (6789051, 6803106), (6789051, 6800049), (6791161, 6803106), (6791891, 6795448)] 2021-10-25 09:32:59.611 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10998832, 10998896), (10999007, 10999060), (10999450, 10999517), (10999672, 10999726), (10999854, 10999913), (11000106, 11000164), (11000658, 11000785), (11000918, 11001269)] 2021-10-25 09:32:59.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18759942, 18760055), (18760198, 18760264), (18760643, 18760698), (18760917, 18760994), (18761154, 18761601), (18761737, 18761831), (18762006, 18768659), (18768807, 18768871), (18769113, 18792050), (18769113, 18779459), (18769116, 18792050), (18769116, 18795010), (18792120, 18793457), (18792120, 18795010)] 2021-10-25 09:32:59.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6686995, 6687063), (6687197, 6687253), (6688737, 6688795), (6689118, 6690976), (6689118, 6689227), (6690139, 6690976), (6691098, 6697009), (6697127, 6697262), (6697457, 6699764), (6699902, 6699986), (6700116, 6700180), (6700496, 6700552), (6700619, 6701749), (6701944, 6708286), (6708578, 6708913), (6708578, 6709039), (6708578, 6709052)] 2021-10-25 09:32:59.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6708286, 6709086, 'FBtr0079312_exon_1') contains intron (6708578, 6708913) 2021-10-25 09:32:59.675 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6688795, 6689336, 'FBtr0336751_exon_1') contains intron (6689118, 6689227) 2021-10-25 09:32:59.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079312_exon_1', 'FBtr0336751_exon_1'] 2021-10-25 09:32:59.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000147: ['FBtr0082483'] 2021-10-25 09:32:59.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000147 has a single transcript. 2021-10-25 09:32:59.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000150: ['FBtr0339146', 'FBtr0346150', 'FBtr0346611'] 2021-10-25 09:32:59.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051730: ['FBtr0080480'] 2021-10-25 09:32:59.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051730 has a single transcript. 2021-10-25 09:32:59.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035286: ['FBtr0300120', 'FBtr0303153'] 2021-10-25 09:32:59.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051735: ['FBtr0080790', 'FBtr0305562'] 2021-10-25 09:32:59.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025629: ['FBtr0070331'] 2021-10-25 09:32:59.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025629 has a single transcript. 2021-10-25 09:32:59.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025630: ['FBtr0070330', 'FBtr0344156'] 2021-10-25 09:32:59.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1870085, 1870146)] 2021-10-25 09:32:59.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15895701, 15895754), (15895811, 15895868), (15896267, 15896337), (15896648, 15896744)] 2021-10-25 09:32:59.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15895754, 15896267, 'FBtr0080790_exon_2') contains intron (15895811, 15895868) 2021-10-25 09:32:59.761 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080790_exon_2'] 2021-10-25 09:32:59.761 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31745590, 31745769)] 2021-10-25 09:32:59.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2072697, 2073133), (2072725, 2073133)] 2021-10-25 09:32:59.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025631: ['FBtr0070341', 'FBtr0303043', 'FBtr0303044', 'FBtr0303045', 'FBtr0310288', 'FBtr0310289'] 2021-10-25 09:32:59.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035287: ['FBtr0300714', 'FBtr0300715', 'FBtr0300716', 'FBtr0300717', 'FBtr0332669', 'FBtr0332670'] 2021-10-25 09:32:59.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051739: ['FBtr0080919', 'FBtr0331622', 'FBtr0331623'] 2021-10-25 09:32:59.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000152: ['FBtr0074372'] 2021-10-25 09:32:59.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000152 has a single transcript. 2021-10-25 09:32:59.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000153: ['FBtr0080542', 'FBtr0309960', 'FBtr0342712'] 2021-10-25 09:32:59.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265937: ['FBtr0342901'] 2021-10-25 09:32:59.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265937 has a single transcript. 2021-10-25 09:32:59.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265938: ['FBtr0342902'] 2021-10-25 09:32:59.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265938 has a single transcript. 2021-10-25 09:32:59.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038653: ['FBtr0083677', 'FBtr0332809', 'FBtr0330029'] 2021-10-25 09:32:59.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265939: ['FBtr0342904'] 2021-10-25 09:32:59.911 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265939 has a single transcript. 2021-10-25 09:32:59.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16827246, 16827493), (16827393, 16827493), (16827644, 16827720), (16827889, 16828051), (16828552, 16828616), (16828795, 16828856), (16828946, 16829002), (16830460, 16830523)] 2021-10-25 09:32:59.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16827358, 16827644, 'FBtr0331623_exon_1') contains intron (16827393, 16827493) 2021-10-25 09:32:59.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331623_exon_1'] 2021-10-25 09:32:59.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265940: ['FBtr0342907'] 2021-10-25 09:32:59.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265940 has a single transcript. 2021-10-25 09:32:59.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265941: ['FBtr0342908'] 2021-10-25 09:32:59.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265941 has a single transcript. 2021-10-25 09:32:59.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265942: ['FBtr0342909'] 2021-10-25 09:32:59.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265942 has a single transcript. 2021-10-25 09:32:59.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265943: ['FBtr0342911'] 2021-10-25 09:32:59.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265943 has a single transcript. 2021-10-25 09:32:59.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265944: ['FBtr0342912'] 2021-10-25 09:32:59.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265944 has a single transcript. 2021-10-25 09:32:59.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265945: ['FBtr0342914'] 2021-10-25 09:32:59.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265945 has a single transcript. 2021-10-25 09:32:59.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265946: ['FBtr0342910'] 2021-10-25 09:32:59.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265946 has a single transcript. 2021-10-25 09:32:59.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265947: ['FBtr0342918'] 2021-10-25 09:32:59.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265947 has a single transcript. 2021-10-25 09:32:59.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13822148, 13822681), (13823049, 13823113)] 2021-10-25 09:32:59.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265948: ['FBtr0342917'] 2021-10-25 09:32:59.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265948 has a single transcript. 2021-10-25 09:32:59.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18806606, 18806693), (18807290, 18809364), (18809523, 18847590)] 2021-10-25 09:32:59.974 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18799279, 18807290, 'FBtr0083677_exon_3') contains intron (18806606, 18806693) 2021-10-25 09:32:59.974 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18799279, 18807290, 'FBtr0330029_exon_3') contains intron (18806606, 18806693) 2021-10-25 09:32:59.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083677_exon_3', 'FBtr0330029_exon_3'] 2021-10-25 09:32:59.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.976 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0080542': ['FBtr0342712']} 2021-10-25 09:32:59.977 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0342712']] 2021-10-25 09:32:59.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265949: ['FBtr0342916'] 2021-10-25 09:32:59.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265949 has a single transcript. 2021-10-25 09:32:59.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2045947, 2046015), (2045949, 2046015), (2046983, 2047050), (2047191, 2047557), (2047647, 2048315), (2047647, 2048238), (2047647, 2048311), (2047647, 2049195)] 2021-10-25 09:32:59.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:32:59.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:32:59.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265950: ['FBtr0342920'] 2021-10-25 09:32:59.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265950 has a single transcript. 2021-10-25 09:32:59.986 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083677': ['FBtr0330029']} 2021-10-25 09:32:59.986 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330029']] 2021-10-25 09:32:59.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265951: ['FBtr0342922'] 2021-10-25 09:32:59.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031851: ['FBtr0079299'] 2021-10-25 09:32:59.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265951 has a single transcript. 2021-10-25 09:32:59.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031851 has a single transcript. 2021-10-25 09:32:59.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265952: ['FBtr0342930'] 2021-10-25 09:32:59.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265952 has a single transcript. 2021-10-25 09:32:59.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031853: ['FBtr0300056'] 2021-10-25 09:32:59.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031853 has a single transcript. 2021-10-25 09:33:00.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1876781, 1876847), (1877185, 1877290), (1877446, 1877517), (1877662, 1877760), (1877827, 1877891), (1878039, 1878355), (1878039, 1881128), (1878544, 1881128), (1878559, 1881128), (1881476, 1882999), (1881548, 1882999), (1881548, 1882319), (1881557, 1882999)] 2021-10-25 09:33:00.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265953: ['FBtr0342923'] 2021-10-25 09:33:00.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265953 has a single transcript. 2021-10-25 09:33:00.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031854: ['FBtr0079305'] 2021-10-25 09:33:00.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031854 has a single transcript. 2021-10-25 09:33:00.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265954: ['FBtr0342925'] 2021-10-25 09:33:00.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265954 has a single transcript. 2021-10-25 09:33:00.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265955: ['FBtr0342935'] 2021-10-25 09:33:00.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265955 has a single transcript. 2021-10-25 09:33:00.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031855: ['FBtr0079303', 'FBtr0339237'] 2021-10-25 09:33:00.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265956: ['FBtr0342937', 'FBtr0342938'] 2021-10-25 09:33:00.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000157: ['FBtr0072378', 'FBtr0072379', 'FBtr0300076'] 2021-10-25 09:33:00.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051740: ['FBtr0081028'] 2021-10-25 09:33:00.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051740 has a single transcript. 2021-10-25 09:33:00.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038654: ['FBtr0083695', 'FBtr0334521'] 2021-10-25 09:33:00.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051741: ['FBtr0081032'] 2021-10-25 09:33:00.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051741 has a single transcript. 2021-10-25 09:33:00.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051742: ['FBtr0081025', 'FBtr0340183'] 2021-10-25 09:33:00.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6743029, 6753939)] 2021-10-25 09:33:00.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5288368, 5288428)] 2021-10-25 09:33:00.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18875935, 18876737)] 2021-10-25 09:33:00.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259229: ['FBtr0299796'] 2021-10-25 09:33:00.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259229 has a single transcript. 2021-10-25 09:33:00.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24815567, 24817593), (24817769, 24819813), (24820007, 24833408), (24833550, 24833625), (24833730, 24833796), (24834013, 24834153)] 2021-10-25 09:33:00.093 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24833796, 24834602, 'FBtr0072378_exon_6') contains intron (24834013, 24834153) 2021-10-25 09:33:00.094 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24833408, 24833730, 'FBtr0300076_exon_4') contains intron (24833550, 24833625) 2021-10-25 09:33:00.094 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24833796, 24834602, 'FBtr0300076_exon_5') contains intron (24834013, 24834153) 2021-10-25 09:33:00.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072378_exon_6', 'FBtr0300076_exon_4', 'FBtr0300076_exon_5'] 2021-10-25 09:33:00.095 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:00.096 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.096 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259230: ['FBtr0299675'] 2021-10-25 09:33:00.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259230 has a single transcript. 2021-10-25 09:33:00.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259231: ['FBtr0299681'] 2021-10-25 09:33:00.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259231 has a single transcript. 2021-10-25 09:33:00.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259233: ['FBtr0299842', 'FBtr0299843', 'FBtr0304106'] 2021-10-25 09:33:00.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031856: ['FBtr0290242'] 2021-10-25 09:33:00.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031856 has a single transcript. 2021-10-25 09:33:00.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038655: ['FBtr0083696'] 2021-10-25 09:33:00.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038655 has a single transcript. 2021-10-25 09:33:00.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265957: ['FBtr0342932', 'FBtr0342933'] 2021-10-25 09:33:00.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038656: ['FBtr0083726'] 2021-10-25 09:33:00.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038656 has a single transcript. 2021-10-25 09:33:00.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031857: ['FBtr0301972', 'FBtr0290295', 'FBtr0331216', 'FBtr0331217', 'FBtr0331218', 'FBtr0331219', 'FBtr0331220', 'FBtr0331221', 'FBtr0331222'] 2021-10-25 09:33:00.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038658: ['FBtr0083725'] 2021-10-25 09:33:00.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038658 has a single transcript. 2021-10-25 09:33:00.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051752: ['FBtr0331193'] 2021-10-25 09:33:00.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051752 has a single transcript. 2021-10-25 09:33:00.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038659: ['FBtr0083698', 'FBtr0083699', 'FBtr0334522'] 2021-10-25 09:33:00.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051754: ['FBtr0085891'] 2021-10-25 09:33:00.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051754 has a single transcript. 2021-10-25 09:33:00.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24772275, 24775606), (24774055, 24775606), (24775915, 24775981), (24776108, 24779865), (24780255, 24780324), (24781052, 24781117), (24781393, 24781448)] 2021-10-25 09:33:00.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051755: ['FBtr0303882', 'FBtr0308122'] 2021-10-25 09:33:00.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5259280, 5259342)] 2021-10-25 09:33:00.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5258941, 5259992, 'FBtr0342933_exon_1') contains intron (5259280, 5259342) 2021-10-25 09:33:00.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342933_exon_1'] 2021-10-25 09:33:00.199 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000158: ['FBtr0084869'] 2021-10-25 09:33:00.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000158 has a single transcript. 2021-10-25 09:33:00.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000163: ['FBtr0111000', 'FBtr0074388', 'FBtr0343763', 'FBtr0343764'] 2021-10-25 09:33:00.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9999043, 9999109), (10001433, 10002187), (10002237, 10002296), (10002342, 10002527), (10002617, 10002675), (10002617, 10002723)] 2021-10-25 09:33:00.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18907020, 18907199), (18908450, 18908505)] 2021-10-25 09:33:00.230 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18907199, 18910348, 'FBtr0083698_exon_2') contains intron (18908450, 18908505) 2021-10-25 09:33:00.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025632: ['FBtr0340107', 'FBtr0340108', 'FBtr0340109'] 2021-10-25 09:33:00.230 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18906608, 18910348, 'FBtr0083699_exon_1') contains intron (18907020, 18907199) 2021-10-25 09:33:00.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083698_exon_2', 'FBtr0083699_exon_1'] 2021-10-25 09:33:00.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035290: ['FBtr0273261', 'FBtr0310544', 'FBtr0310545'] 2021-10-25 09:33:00.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265958: ['FBtr0342942'] 2021-10-25 09:33:00.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265958 has a single transcript. 2021-10-25 09:33:00.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265959: ['FBtr0342946', 'FBtr0342947', 'FBtr0342948', 'FBtr0342949'] 2021-10-25 09:33:00.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051759: ['FBtr0290239', 'FBtr0290240'] 2021-10-25 09:33:00.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2042077, 2042216), (2042147, 2042216), (2042352, 2051794), (2042352, 2053816), (2051934, 2053816), (2053305, 2053816), (2054440, 2054503)] 2021-10-25 09:33:00.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259234: ['FBtr0299845', 'FBtr0299846', 'FBtr0299847', 'FBtr0300527', 'FBtr0301766', 'FBtr0339381', 'FBtr0339382'] 2021-10-25 09:33:00.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1894263, 1894321), (1894447, 1894604), (1895318, 1895418), (1895560, 1896721), (1896879, 1896937), (1897029, 1897580), (1897029, 1902465), (1902706, 1909899)] 2021-10-25 09:33:00.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038660: ['FBtr0083724'] 2021-10-25 09:33:00.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038660 has a single transcript. 2021-10-25 09:33:00.327 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12207961, 12208019)] 2021-10-25 09:33:00.328 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12207918, 12210110, 'FBtr0290239_exon_1') contains intron (12207961, 12208019) 2021-10-25 09:33:00.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290239_exon_1'] 2021-10-25 09:33:00.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17161191, 17188991), (17161191, 17175346), (17178970, 17186793), (17187123, 17188991), (17190686, 17190754), (17191377, 17191438), (17191720, 17191787), (17192461, 17192530), (17193035, 17193312), (17193035, 17193898), (17193417, 17193898), (17195253, 17200286)] 2021-10-25 09:33:00.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038662: ['FBtr0083723', 'FBtr0334525'] 2021-10-25 09:33:00.350 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20248150, 20255897), (20248325, 20255897), (20249060, 20255897), (20256638, 20260861), (20260487, 20260861), (20260989, 20261212), (20261294, 20261535), (20261660, 20261723), (20261891, 20261948), (20262152, 20262311), (20262461, 20262528), (20262594, 20262655), (20262841, 20263176), (20263584, 20263633), (20263733, 20263794)] 2021-10-25 09:33:00.351 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.351 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18927658, 18928027), (18928128, 18928194), (18928314, 18928388)] 2021-10-25 09:33:00.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6760225, 6760559), (6760728, 6760797), (6761169, 6761235), (6761693, 6761768), (6762035, 6762106), (6765882, 6765970), (6765882, 6766093), (6766526, 6766585), (6767013, 6767257), (6768445, 6768503), (6768792, 6768845), (6768968, 6769397), (6769127, 6769397), (6769736, 6769952), (6770081, 6770133), (6770270, 6770334), (6770533, 6770590), (6770709, 6770885), (6770709, 6772551), (6770709, 6772341)] 2021-10-25 09:33:00.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051760: ['FBtr0301019', 'FBtr0331996', 'FBtr0331997'] 2021-10-25 09:33:00.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025633: ['FBtr0070161', 'FBtr0110791', 'FBtr0339430', 'FBtr0339431', 'FBtr0339432', 'FBtr0339433', 'FBtr0339434'] 2021-10-25 09:33:00.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035293: ['FBtr0072858', 'FBtr0346543'] 2021-10-25 09:33:00.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038665: ['FBtr0083722', 'FBtr0304691'] 2021-10-25 09:33:00.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12142833, 12145069), (12142855, 12145069), (12145266, 12153507), (12153974, 12155471), (12155658, 12160689), (12160882, 12161244), (12161650, 12162739), (12163041, 12163456), (12163610, 12166726), (12166836, 12166897), (12167042, 12167112), (12167321, 12168119), (12168369, 12168427), (12168612, 12168687)] 2021-10-25 09:33:00.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9446511, 9449085), (9449684, 9449745), (9450274, 9466871), (9458757, 9466871), (9464432, 9466871), (9466963, 9469846), (9469914, 9470028), (9470164, 9471275), (9471347, 9471420), (9471565, 9471700), (9471756, 9471818), (9473165, 9473234), (9473165, 9473237), (9474200, 9474261), (9474860, 9474923), (9475037, 9475094), (9475204, 9475308), (9475204, 9476100), (9475425, 9476100), (9476168, 9476225), (9476998, 9477062), (9477137, 9477218), (9477137, 9477373), (9477246, 9477373), (9477487, 9477542)] 2021-10-25 09:33:00.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1934214, 1934271), (1934733, 1934799), (1935159, 1935213), (1935329, 1935387), (1935549, 1935611), (1936381, 1938440)] 2021-10-25 09:33:00.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18978568, 18978643), (18978583, 18978643)] 2021-10-25 09:33:00.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265960: ['FBtr0342953'] 2021-10-25 09:33:00.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265960 has a single transcript. 2021-10-25 09:33:00.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000166: ['FBtr0081664', 'FBtr0081665', 'FBtr0081666', 'FBtr0081667', 'FBtr0081668'] 2021-10-25 09:33:00.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265961: ['FBtr0342955'] 2021-10-25 09:33:00.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265961 has a single transcript. 2021-10-25 09:33:00.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265962: ['FBtr0342964'] 2021-10-25 09:33:00.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265962 has a single transcript. 2021-10-25 09:33:00.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265963: ['FBtr0342966', 'FBtr0346710'] 2021-10-25 09:33:00.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035294: ['FBtr0072841'] 2021-10-25 09:33:00.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035294 has a single transcript. 2021-10-25 09:33:00.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035295: ['FBtr0072842', 'FBtr0333430'] 2021-10-25 09:33:00.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051769: ['FBtr0080602'] 2021-10-25 09:33:00.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051769 has a single transcript. 2021-10-25 09:33:00.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038666: ['FBtr0083721', 'FBtr0304689', 'FBtr0304690'] 2021-10-25 09:33:00.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051773: ['FBtr0077509'] 2021-10-25 09:33:00.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051773 has a single transcript. 2021-10-25 09:33:00.577 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:00.578 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.578 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(585229, 608439), (608514, 611410), (611341, 611410), (611685, 611750), (612033, 612091), (612208, 612281), (612211, 612281), (612433, 612495), (613774, 613846), (614023, 614572), (614713, 614773), (615512, 619291), (615693, 617274), (615743, 617374), (615970, 617274), (619485, 620038)] 2021-10-25 09:33:00.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051774: ['FBtr0308125', 'FBtr0308126', 'FBtr0308127'] 2021-10-25 09:33:00.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1947785, 1947846), (1949023, 1949081), (1949243, 1949305), (1949643, 1949707)] 2021-10-25 09:33:00.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265964: ['FBtr0342967', 'FBtr0342968'] 2021-10-25 09:33:00.642 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6756960, 6759106), (6756960, 6757472), (6758416, 6758471), (6758431, 6758471), (6758547, 6759106), (6758569, 6759106)] 2021-10-25 09:33:00.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18979161, 18979223), (18980302, 18980369), (18980628, 18980684), (18980751, 18980819), (18980873, 18981256), (18981106, 18981256)] 2021-10-25 09:33:00.656 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035298: ['FBtr0072843', 'FBtr0072844', 'FBtr0333431'] 2021-10-25 09:33:00.669 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3905587, 3910988), (3911336, 3914727), (3911336, 3916780), (3915096, 3916780), (3915099, 3916780), (3917455, 3917562), (3919794, 3929306), (3929503, 3929774), (3930035, 3946495), (3946697, 3989392), (3989800, 3991547)] 2021-10-25 09:33:00.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:00.695 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.695 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1963491, 1965074), (1964609, 1964836), (1964609, 1965074), (1965273, 1965329), (1966306, 1966364)] 2021-10-25 09:33:00.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.730 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265965: ['FBtr0342969'] 2021-10-25 09:33:00.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265965 has a single transcript. 2021-10-25 09:33:00.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038672: ['FBtr0083719', 'FBtr0343992'] 2021-10-25 09:33:00.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265966: ['FBtr0342970'] 2021-10-25 09:33:00.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265966 has a single transcript. 2021-10-25 09:33:00.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265967: ['FBtr0342975'] 2021-10-25 09:33:00.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265967 has a single transcript. 2021-10-25 09:33:00.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265968: ['FBtr0301130'] 2021-10-25 09:33:00.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265968 has a single transcript. 2021-10-25 09:33:00.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265974: ['FBtr0087495', 'FBtr0333164', 'FBtr0333165'] 2021-10-25 09:33:00.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051776: ['FBtr0077522'] 2021-10-25 09:33:00.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051776 has a single transcript. 2021-10-25 09:33:00.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051777: ['FBtr0077542'] 2021-10-25 09:33:00.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051777 has a single transcript. 2021-10-25 09:33:00.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19023442, 19023503), (19023644, 19023700)] 2021-10-25 09:33:00.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031858: ['FBtr0079337', 'FBtr0079336', 'FBtr0332335'] 2021-10-25 09:33:00.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051778: ['FBtr0077543', 'FBtr0339574'] 2021-10-25 09:33:00.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259236: ['FBtr0299850', 'FBtr0299851', 'FBtr0344865'] 2021-10-25 09:33:00.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035299: ['FBtr0072852'] 2021-10-25 09:33:00.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035299 has a single transcript. 2021-10-25 09:33:00.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035300: ['FBtr0072845'] 2021-10-25 09:33:00.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035300 has a single transcript. 2021-10-25 09:33:00.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000173: ['FBtr0073855', 'FBtr0307296', 'FBtr0300566', 'FBtr0332843', 'FBtr0332844'] 2021-10-25 09:33:00.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035308: ['FBtr0300831', 'FBtr0333450', 'FBtr0333451', 'FBtr0333452'] 2021-10-25 09:33:00.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14527991, 14552911), (14553064, 14563010), (14563085, 14563258), (14563385, 14564953), (14564008, 14564953), (14565073, 14582919), (14583023, 14583095), (14583246, 14583304), (14583631, 14583693), (14584010, 14584117)] 2021-10-25 09:33:00.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3704633, 3704879)] 2021-10-25 09:33:00.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038673: ['FBtr0083710'] 2021-10-25 09:33:00.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038673 has a single transcript. 2021-10-25 09:33:00.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038674: ['FBtr0083711'] 2021-10-25 09:33:00.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038674 has a single transcript. 2021-10-25 09:33:00.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038675: ['FBtr0083714'] 2021-10-25 09:33:00.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038675 has a single transcript. 2021-10-25 09:33:00.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15614022, 15631897), (15614022, 15647199), (15632804, 15634181)] 2021-10-25 09:33:00.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6774887, 6775830), (6775894, 6775964), (6776078, 6776138), (6777426, 6777499), (6777594, 6777656), (6777734, 6777795), (6777734, 6777798)] 2021-10-25 09:33:00.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025634: ['FBtr0070121'] 2021-10-25 09:33:00.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025634 has a single transcript. 2021-10-25 09:33:00.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038676: ['FBtr0273301'] 2021-10-25 09:33:00.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038676 has a single transcript. 2021-10-25 09:33:00.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025635: ['FBtr0070116', 'FBtr0070117', 'FBtr0070118'] 2021-10-25 09:33:00.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038678: ['FBtr0083754'] 2021-10-25 09:33:00.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038678 has a single transcript. 2021-10-25 09:33:00.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038679: ['FBtr0083729'] 2021-10-25 09:33:00.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038679 has a single transcript. 2021-10-25 09:33:00.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038680: ['FBtr0083730'] 2021-10-25 09:33:00.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038680 has a single transcript. 2021-10-25 09:33:00.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038681: ['FBtr0083731'] 2021-10-25 09:33:00.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038681 has a single transcript. 2021-10-25 09:33:00.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038682: ['FBtr0083751'] 2021-10-25 09:33:00.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038682 has a single transcript. 2021-10-25 09:33:00.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051779: ['FBtr0110767', 'FBtr0305673'] 2021-10-25 09:33:00.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038683: ['FBtr0083750', 'FBtr0083749', 'FBtr0335020'] 2021-10-25 09:33:00.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2154407, 2154478), (2154782, 2156633), (2155403, 2156633), (2157142, 2157373), (2157738, 2158246), (2158996, 2160104), (2160279, 2160336), (2160450, 2160622), (2160818, 2161630), (2161882, 2163739), (2161929, 2163690), (2161929, 2163739)] 2021-10-25 09:33:00.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(625602, 625661), (625917, 625974), (626362, 626503), (626820, 626898)] 2021-10-25 09:33:00.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (625541, 626362, 'FBtr0070116_exon_1') contains intron (625602, 625661) 2021-10-25 09:33:00.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (625541, 625917, 'FBtr0070117_exon_1') contains intron (625602, 625661) 2021-10-25 09:33:00.976 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (625661, 626362, 'FBtr0070118_exon_2') contains intron (625917, 625974) 2021-10-25 09:33:00.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070116_exon_1', 'FBtr0070117_exon_1', 'FBtr0070118_exon_2'] 2021-10-25 09:33:00.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265976: ['FBtr0342993'] 2021-10-25 09:33:00.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265976 has a single transcript. 2021-10-25 09:33:00.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3693724, 3693793)] 2021-10-25 09:33:00.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259237: ['FBtr0344211'] 2021-10-25 09:33:00.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259237 has a single transcript. 2021-10-25 09:33:00.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13996523, 13998094), (13996523, 13996615), (13996728, 13998094), (13996755, 13998094), (13996797, 13998094)] 2021-10-25 09:33:00.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:00.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:00.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031859: ['FBtr0079377', 'FBtr0309814', 'FBtr0309815', 'FBtr0345445'] 2021-10-25 09:33:01.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265977: ['FBtr0342994'] 2021-10-25 09:33:01.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265977 has a single transcript. 2021-10-25 09:33:01.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259238: ['FBtr0299853', 'FBtr0299854', 'FBtr0299855', 'FBtr0299856', 'FBtr0303157'] 2021-10-25 09:33:01.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265978: ['FBtr0342995'] 2021-10-25 09:33:01.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265978 has a single transcript. 2021-10-25 09:33:01.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265979: ['FBtr0342996'] 2021-10-25 09:33:01.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265979 has a single transcript. 2021-10-25 09:33:01.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19155797, 19155864), (19156402, 19156465), (19156546, 19156658), (19156546, 19159609)] 2021-10-25 09:33:01.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265980: ['FBtr0342997', 'FBtr0342998'] 2021-10-25 09:33:01.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051780: ['FBtr0080758'] 2021-10-25 09:33:01.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051780 has a single transcript. 2021-10-25 09:33:01.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051781: ['FBtr0308925', 'FBtr0308926', 'FBtr0308927', 'FBtr0308928', 'FBtr0308929', 'FBtr0346590'] 2021-10-25 09:33:01.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22374062, 22374403), (22374073, 22374403)] 2021-10-25 09:33:01.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6801650, 6802039), (6801650, 6801707), (6801650, 6801705), (6801852, 6802249), (6802547, 6802610), (6802654, 6802707)] 2021-10-25 09:33:01.075 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6801707, 6802547, 'FBtr0309815_exon_3') contains intron (6801852, 6802249) 2021-10-25 09:33:01.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309815_exon_3'] 2021-10-25 09:33:01.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025637: ['FBtr0070129', 'FBtr0070128', 'FBtr0070127', 'FBtr0070126', 'FBtr0070125', 'FBtr0070124', 'FBtr0070123', 'FBtr0100530', 'FBtr0345314'] 2021-10-25 09:33:01.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035309: ['FBtr0072916'] 2021-10-25 09:33:01.112 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035309 has a single transcript. 2021-10-25 09:33:01.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11294785, 11295493), (11294785, 11294857), (11294785, 11297261), (11295885, 11297261), (11295885, 11296171)] 2021-10-25 09:33:01.114 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11294535, 11295242, 'FBtr0299855_exon_1') contains intron (11294785, 11294857) 2021-10-25 09:33:01.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299855_exon_1'] 2021-10-25 09:33:01.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035311: ['FBtr0072914'] 2021-10-25 09:33:01.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035311 has a single transcript. 2021-10-25 09:33:01.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035312: ['FBtr0072913'] 2021-10-25 09:33:01.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035312 has a single transcript. 2021-10-25 09:33:01.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038685: ['FBtr0083734'] 2021-10-25 09:33:01.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038685 has a single transcript. 2021-10-25 09:33:01.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265981: ['FBtr0342999'] 2021-10-25 09:33:01.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265981 has a single transcript. 2021-10-25 09:33:01.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035313: ['FBtr0308229'] 2021-10-25 09:33:01.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035313 has a single transcript. 2021-10-25 09:33:01.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038686: ['FBtr0083746', 'FBtr0332165'] 2021-10-25 09:33:01.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035315: ['FBtr0072871', 'FBtr0072872'] 2021-10-25 09:33:01.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265982: ['FBtr0343004'] 2021-10-25 09:33:01.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265982 has a single transcript. 2021-10-25 09:33:01.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265983: ['FBtr0343005'] 2021-10-25 09:33:01.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265983 has a single transcript. 2021-10-25 09:33:01.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265984: ['FBtr0343006'] 2021-10-25 09:33:01.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265984 has a single transcript. 2021-10-25 09:33:01.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265985: ['FBtr0343007'] 2021-10-25 09:33:01.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265985 has a single transcript. 2021-10-25 09:33:01.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265986: ['FBtr0343039'] 2021-10-25 09:33:01.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265986 has a single transcript. 2021-10-25 09:33:01.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265987: ['FBtr0343044', 'FBtr0343045'] 2021-10-25 09:33:01.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19178552, 19178618), (19179410, 19179477), (19179648, 19179710), (19180059, 19180126), (19180180, 19180404)] 2021-10-25 09:33:01.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.187 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2197395, 2197456)] 2021-10-25 09:33:01.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16870997, 16876149), (16870997, 16877499), (16870997, 16877496), (16870997, 16875386), (16875508, 16877496), (16875508, 16876149), (16876250, 16877496)] 2021-10-25 09:33:01.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000179: ['FBtr0070672', 'FBtr0331162', 'FBtr0300608', 'FBtr0300609', 'FBtr0343569', 'FBtr0308914', 'FBtr0308915'] 2021-10-25 09:33:01.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10744661, 10744778), (10744707, 10744778)] 2021-10-25 09:33:01.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031860: ['FBtr0079339', 'FBtr0309812'] 2021-10-25 09:33:01.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038690: ['FBtr0083744'] 2021-10-25 09:33:01.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038690 has a single transcript. 2021-10-25 09:33:01.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035316: ['FBtr0072911'] 2021-10-25 09:33:01.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038691: ['FBtr0083743'] 2021-10-25 09:33:01.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035316 has a single transcript. 2021-10-25 09:33:01.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038691 has a single transcript. 2021-10-25 09:33:01.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038692: ['FBtr0083737'] 2021-10-25 09:33:01.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038692 has a single transcript. 2021-10-25 09:33:01.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035317: ['FBtr0332661'] 2021-10-25 09:33:01.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035317 has a single transcript. 2021-10-25 09:33:01.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(656399, 657098), (656489, 657098), (656604, 657098), (656740, 657098), (656784, 657098)] 2021-10-25 09:33:01.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035318: ['FBtr0072909', 'FBtr0072910'] 2021-10-25 09:33:01.277 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (656355, 657899, 'FBtr0100530_exon_1') contains intron (656399, 657098) 2021-10-25 09:33:01.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100530_exon_1'] 2021-10-25 09:33:01.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265988: ['FBtr0304060'] 2021-10-25 09:33:01.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265988 has a single transcript. 2021-10-25 09:33:01.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038693: ['FBtr0301692', 'FBtr0301693', 'FBtr0301694', 'FBtr0344552', 'FBtr0344553'] 2021-10-25 09:33:01.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6803254, 6803309), (6803522, 6803591), (6803888, 6803945), (6803888, 6803954)] 2021-10-25 09:33:01.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259239: ['FBtr0299857', 'FBtr0305981'] 2021-10-25 09:33:01.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265991: ['FBtr0392901', 'FBtr0392902', 'FBtr0392918', 'FBtr0329911', 'FBtr0329912', 'FBtr0329913', 'FBtr0329914', 'FBtr0329915', 'FBtr0087315', 'FBtr0100387', 'FBtr0100388', 'FBtr0111048', 'FBtr0301313', 'FBtr0302163', 'FBtr0310086', 'FBtr0310087', 'FBtr0310088', 'FBtr0329909', 'FBtr0329910', 'FBtr0329916', 'FBtr0342711'] 2021-10-25 09:33:01.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2235578, 2235828), (2235972, 2236049), (2236729, 2236800)] 2021-10-25 09:33:01.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21185018, 21185170), (21185533, 21186206), (21186400, 21188786), (21189972, 21192902)] 2021-10-25 09:33:01.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031861: ['FBtr0309813', 'FBtr0300821', 'FBtr0334841'] 2021-10-25 09:33:01.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4412920, 4428197), (4413899, 4428197), (4427352, 4428197), (4427539, 4428197), (4429498, 4450687), (4450801, 4450876), (4451030, 4478147), (4451039, 4478147), (4478294, 4478353), (4478430, 4482139), (4478430, 4482133), (4478430, 4482130), (4482384, 4482516), (4482384, 4482519)] 2021-10-25 09:33:01.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035321: ['FBtr0072905', 'FBtr0072906', 'FBtr0072907', 'FBtr0072908'] 2021-10-25 09:33:01.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19231680, 19231739), (19231918, 19231975), (19232694, 19232748), (19232903, 19232960), (19233139, 19233200), (19234190, 19234268), (19234421, 19234481), (19234556, 19234614), (19235257, 19235315), (19235583, 19237507), (19235583, 19236829), (19237585, 19237641), (19238375, 19238433), (19238582, 19238672), (19238996, 19240758), (19238996, 19240226), (19240289, 19240758), (19240838, 19242524), (19240838, 19241653), (19241710, 19242524), (19242669, 19242721), (19242823, 19242887), (19243159, 19243215), (19243878, 19243929), (19244628, 19244688), (19244964, 19245029), (19245200, 19245253), (19245415, 19245551), (19245671, 19245736), (19245845, 19246037)] 2021-10-25 09:33:01.403 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19233200, 19234421, 'FBtr0301693_exon_22') contains intron (19234190, 19234268) 2021-10-25 09:33:01.404 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19241619, 19242669, 'FBtr0301694_exon_11') contains intron (19241710, 19242524) 2021-10-25 09:33:01.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19233200, 19234421, 'FBtr0344552_exon_21') contains intron (19234190, 19234268) 2021-10-25 09:33:01.406 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19233200, 19234421, 'FBtr0344553_exon_21') contains intron (19234190, 19234268) 2021-10-25 09:33:01.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301693_exon_22', 'FBtr0301694_exon_11', 'FBtr0344552_exon_21', 'FBtr0344553_exon_21'] 2021-10-25 09:33:01.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.412 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331162': ['FBtr0300608']} 2021-10-25 09:33:01.412 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0300608']] 2021-10-25 09:33:01.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259241: ['FBtr0299861', 'FBtr0299862'] 2021-10-25 09:33:01.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6805179, 6805245), (6805359, 6805431), (6805542, 6805597), (6805542, 6805593)] 2021-10-25 09:33:01.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051784: ['FBtr0302499'] 2021-10-25 09:33:01.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051784 has a single transcript. 2021-10-25 09:33:01.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051785: ['FBtr0300025'] 2021-10-25 09:33:01.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051785 has a single transcript. 2021-10-25 09:33:01.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10969297, 10969391), (10969468, 10977715), (10977836, 10983696), (10983891, 11037474), (11036208, 11037474), (11037762, 11039804)] 2021-10-25 09:33:01.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051787: ['FBtr0081055'] 2021-10-25 09:33:01.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051787 has a single transcript. 2021-10-25 09:33:01.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051788: ['FBtr0081056', 'FBtr0343819'] 2021-10-25 09:33:01.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2253271, 2253328), (2253692, 2253776), (2253986, 2257111), (2253986, 2256605), (2253986, 2255538), (2255822, 2257111)] 2021-10-25 09:33:01.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259242: ['FBtr0299863', 'FBtr0331297', 'FBtr0332386'] 2021-10-25 09:33:01.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18257773, 18257833)] 2021-10-25 09:33:01.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031865: ['FBtr0079373', 'FBtr0079374'] 2021-10-25 09:33:01.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051789: ['FBtr0081071', 'FBtr0343827', 'FBtr0343828'] 2021-10-25 09:33:01.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6424187, 6464055), (6464150, 6466841), (6468520, 6483793), (6483923, 6484000), (6484097, 6484162), (6484319, 6484774), (6485527, 6511132), (6511178, 6523731)] 2021-10-25 09:33:01.592 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.592 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6862314, 6862385), (6862558, 6862624), (6862879, 6863707), (6863816, 6864031), (6864352, 6870133), (6864352, 6864418), (6864639, 6870133)] 2021-10-25 09:33:01.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038694: ['FBtr0083741'] 2021-10-25 09:33:01.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038694 has a single transcript. 2021-10-25 09:33:01.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038695: ['FBtr0083738', 'FBtr0346143'] 2021-10-25 09:33:01.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000180: ['FBtr0079929', 'FBtr0329984'] 2021-10-25 09:33:01.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035323: ['FBtr0072878'] 2021-10-25 09:33:01.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035323 has a single transcript. 2021-10-25 09:33:01.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025638: ['FBtr0308651', 'FBtr0070122', 'FBtr0343564'] 2021-10-25 09:33:01.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035325: ['FBtr0072879'] 2021-10-25 09:33:01.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035325 has a single transcript. 2021-10-25 09:33:01.666 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18606115, 18606177)] 2021-10-25 09:33:01.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035328: ['FBtr0072883'] 2021-10-25 09:33:01.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035328 has a single transcript. 2021-10-25 09:33:01.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19258101, 19258309), (19258724, 19258797), (19258952, 19259012), (19259121, 19259177), (19259401, 19259455), (19259573, 19259631)] 2021-10-25 09:33:01.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031866: ['FBtr0079344', 'FBtr0307033', 'FBtr0343867'] 2021-10-25 09:33:01.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035331: ['FBtr0072887', 'FBtr0330187'] 2021-10-25 09:33:01.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9985146, 9986788), (9986955, 9987600), (9987727, 9992254), (9992462, 9993266)] 2021-10-25 09:33:01.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.697 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079929': ['FBtr0329984']} 2021-10-25 09:33:01.697 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329984']] 2021-10-25 09:33:01.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000181: ['FBtr0087782', 'FBtr0087783'] 2021-10-25 09:33:01.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2322748, 2323299), (2323495, 2338748), (2338989, 2342647), (2343750, 2343851)] 2021-10-25 09:33:01.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.735 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072887': ['FBtr0330187']} 2021-10-25 09:33:01.736 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330187']] 2021-10-25 09:33:01.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259243: ['FBtr0302638', 'FBtr0302639', 'FBtr0302640', 'FBtr0302641', 'FBtr0302642', 'FBtr0302643', 'FBtr0302637', 'FBtr0299891', 'FBtr0299892', 'FBtr0299893', 'FBtr0300528', 'FBtr0300529', 'FBtr0300530', 'FBtr0300531', 'FBtr0300532', 'FBtr0300533', 'FBtr0300534', 'FBtr0300535'] 2021-10-25 09:33:01.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(647525, 647609), (647637, 647702)] 2021-10-25 09:33:01.739 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (647303, 647637, 'FBtr0308651_exon_1') contains intron (647525, 647609) 2021-10-25 09:33:01.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308651_exon_1'] 2021-10-25 09:33:01.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035332: ['FBtr0072888'] 2021-10-25 09:33:01.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035332 has a single transcript. 2021-10-25 09:33:01.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038697: ['FBtr0083775'] 2021-10-25 09:33:01.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038697 has a single transcript. 2021-10-25 09:33:01.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035333: ['FBtr0072901', 'FBtr0300773', 'FBtr0345587'] 2021-10-25 09:33:01.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038700: ['FBtr0083755', 'FBtr0339152'] 2021-10-25 09:33:01.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12870330, 12870402)] 2021-10-25 09:33:01.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12870248, 12871240, 'FBtr0087783_exon_1') contains intron (12870330, 12870402) 2021-10-25 09:33:01.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087783_exon_1'] 2021-10-25 09:33:01.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6875537, 6897093), (6896862, 6897093), (6898086, 6901241), (6901474, 6902246), (6902603, 6902807), (6903003, 6903258), (6903360, 6903424), (6903620, 6903680), (6903869, 6903930), (6904073, 6904132), (6904458, 6904519), (6904675, 6904743), (6904905, 6904964)] 2021-10-25 09:33:01.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6896831, 6898086, 'FBtr0343867_exon_1') contains intron (6896862, 6897093) 2021-10-25 09:33:01.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343867_exon_1'] 2021-10-25 09:33:01.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19388194, 19388272), (19388454, 19388514), (19388750, 19388811), (19389043, 19389103), (19389276, 19389342), (19389633, 19389695)] 2021-10-25 09:33:01.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051792: ['FBtr0321311', 'FBtr0321312'] 2021-10-25 09:33:01.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000182: ['FBtr0080804', 'FBtr0080805', 'FBtr0080803'] 2021-10-25 09:33:01.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2368425, 2368629), (2370048, 2370105)] 2021-10-25 09:33:01.828 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2368013, 2370048, 'FBtr0072901_exon_2') contains intron (2368425, 2368629) 2021-10-25 09:33:01.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072901_exon_2'] 2021-10-25 09:33:01.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025639: ['FBtr0070151', 'FBtr0308652'] 2021-10-25 09:33:01.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18997579, 18997950), (18998055, 18998123), (18998209, 18998279), (18998588, 18998657), (18998866, 18998920), (19000500, 19000564), (19001034, 19001093), (19001359, 19001421), (19002351, 19002410)] 2021-10-25 09:33:01.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038701: ['FBtr0083756'] 2021-10-25 09:33:01.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038701 has a single transcript. 2021-10-25 09:33:01.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038702: ['FBtr0339153'] 2021-10-25 09:33:01.866 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038702 has a single transcript. 2021-10-25 09:33:01.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15763270, 15763349), (15763589, 15763645), (15763829, 15763925), (15763829, 15765122), (15764835, 15773815), (15765252, 15773815), (15765252, 15773040), (15765447, 15773815), (15765447, 15773040), (15766713, 15773040), (15767253, 15773815), (15769551, 15773815), (15771147, 15773815), (15773253, 15773815), (15773966, 15777177), (15773966, 15774427), (15774757, 15777177), (15774757, 15775775), (15775507, 15777177), (15777286, 15778351), (15778546, 15779264), (15778546, 15780057), (15779658, 15780984), (15780277, 15780984), (15780735, 15780984), (15781079, 15781772), (15781906, 15783087), (15783244, 15783314), (15783466, 15803360), (15803487, 15814728), (15803487, 15816759)] 2021-10-25 09:33:01.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038704: ['FBtr0083758', 'FBtr0083759', 'FBtr0083760', 'FBtr0445726'] 2021-10-25 09:33:01.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031868: ['FBtr0079345', 'FBtr0332324'] 2021-10-25 09:33:01.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(653238, 653369), (654096, 655379), (654096, 654864)] 2021-10-25 09:33:01.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16042527, 16043074), (16043245, 16043823), (16044361, 16044422), (16044472, 16044787), (16044857, 16044920), (16045000, 16045065), (16045392, 16045840), (16045966, 16046026), (16046408, 16046601), (16047729, 16047957)] 2021-10-25 09:33:01.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051793: ['FBtr0081138', 'FBtr0340318'] 2021-10-25 09:33:01.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:01.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025640: ['FBtr0070115'] 2021-10-25 09:33:01.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025640 has a single transcript. 2021-10-25 09:33:01.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035334: ['FBtr0072889'] 2021-10-25 09:33:01.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035334 has a single transcript. 2021-10-25 09:33:01.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035335: ['FBtr0072900', 'FBtr0289966', 'FBtr0331415', 'FBtr0331416'] 2021-10-25 09:33:01.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025641: ['FBtr0070239', 'FBtr0070241', 'FBtr0342731', 'FBtr0310282', 'FBtr0310283', 'FBtr0303264'] 2021-10-25 09:33:01.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19003736, 19003947), (19003879, 19003947), (19004202, 19004272), (19004426, 19004492), (19006291, 19006350), (19007977, 19008032)] 2021-10-25 09:33:01.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:01.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:01.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19403489, 19403609), (19403822, 19403892), (19404118, 19404300), (19404245, 19404300), (19404749, 19404841)] 2021-10-25 09:33:01.968 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19403467, 19403822, 'FBtr0083759_exon_1') contains intron (19403489, 19403609) 2021-10-25 09:33:01.969 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19403467, 19403822, 'FBtr0083760_exon_1') contains intron (19403489, 19403609) 2021-10-25 09:33:01.969 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19403467, 19404118, 'FBtr0445726_exon_1') contains intron (19403489, 19403609) 2021-10-25 09:33:01.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083759_exon_1', 'FBtr0083760_exon_1', 'FBtr0445726_exon_1'] 2021-10-25 09:33:01.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031869: ['FBtr0079367', 'FBtr0332326', 'FBtr0332327', 'FBtr0306285'] 2021-10-25 09:33:02.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051797: ['FBtr0081227'] 2021-10-25 09:33:02.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051797 has a single transcript. 2021-10-25 09:33:02.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000183: ['FBtr0081002', 'FBtr0330225', 'FBtr0330226', 'FBtr0305688'] 2021-10-25 09:33:02.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051798: ['FBtr0081200', 'FBtr0334163'] 2021-10-25 09:33:02.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2373067, 2373128), (2373444, 2373596), (2373444, 2373627), (2373444, 2373684)] 2021-10-25 09:33:02.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19395015, 19395075), (19395271, 19395329)] 2021-10-25 09:33:02.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6932750, 6932812), (6933052, 6933109), (6933337, 6933417), (6933933, 6934046), (6934511, 6934571), (6934742, 6934805), (6934908, 6934989), (6936697, 6937539), (6936697, 6937223), (6937314, 6937935), (6937876, 6937935), (6938148, 6938202), (6939205, 6939264), (6939458, 6939524), (6939715, 6940610), (6939733, 6940610), (6940681, 6940736), (6940951, 6942143)] 2021-10-25 09:33:02.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.098 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1291344, 1291404), (1291568, 1291625), (1291787, 1291843), (1291986, 1292051), (1292257, 1292320), (1293016, 1293079), (1293257, 1293317), (1294286, 1295009), (1294286, 1294563), (1295936, 1308075), (1295936, 1309858), (1295936, 1304103), (1295936, 1316074), (1295936, 1304765), (1304360, 1304765), (1309900, 1316074), (1316161, 1322199)] 2021-10-25 09:33:02.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17461843, 17462030), (17461843, 17462167), (17462342, 17462428), (17462683, 17462737), (17462955, 17463031), (17463882, 17463987), (17464125, 17464189), (17464555, 17472096)] 2021-10-25 09:33:02.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038705: ['FBtr0113247'] 2021-10-25 09:33:02.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038705 has a single transcript. 2021-10-25 09:33:02.121 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081002': ['FBtr0330226']} 2021-10-25 09:33:02.122 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330226']] 2021-10-25 09:33:02.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038706: ['FBtr0083770'] 2021-10-25 09:33:02.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038706 has a single transcript. 2021-10-25 09:33:02.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051800: ['FBtr0081179'] 2021-10-25 09:33:02.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051800 has a single transcript. 2021-10-25 09:33:02.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038708: ['FBtr0083769'] 2021-10-25 09:33:02.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038708 has a single transcript. 2021-10-25 09:33:02.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051802: ['FBtr0081058'] 2021-10-25 09:33:02.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051802 has a single transcript. 2021-10-25 09:33:02.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038709: ['FBtr0083768'] 2021-10-25 09:33:02.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038709 has a single transcript. 2021-10-25 09:33:02.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20816164, 20816229), (20816171, 20816229), (20816171, 20816566), (20816833, 20832845), (20819469, 20832845), (20820726, 20832845), (20826122, 20832845), (20828340, 20832845), (20828340, 20829384), (20829540, 20832845), (20833205, 20833282), (20833657, 20833729), (20833657, 20833732), (20833869, 20834001)] 2021-10-25 09:33:02.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051803: ['FBtr0081010'] 2021-10-25 09:33:02.149 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20816117, 20816833, 'FBtr0302641_exon_1') contains intron (20816164, 20816229) 2021-10-25 09:33:02.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051803 has a single transcript. 2021-10-25 09:33:02.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038714: ['FBtr0083811'] 2021-10-25 09:33:02.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038714 has a single transcript. 2021-10-25 09:33:02.151 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20816117, 20816833, 'FBtr0299891_exon_1') contains intron (20816164, 20816229) 2021-10-25 09:33:02.151 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20816117, 20816833, 'FBtr0299892_exon_1') contains intron (20816164, 20816229) 2021-10-25 09:33:02.152 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20816117, 20816833, 'FBtr0300528_exon_1') contains intron (20816164, 20816229) 2021-10-25 09:33:02.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302641_exon_1', 'FBtr0299891_exon_1', 'FBtr0299892_exon_1', 'FBtr0300528_exon_1'] 2021-10-25 09:33:02.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038715: ['FBtr0114553'] 2021-10-25 09:33:02.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051804: ['FBtr0080967'] 2021-10-25 09:33:02.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038715 has a single transcript. 2021-10-25 09:33:02.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051804 has a single transcript. 2021-10-25 09:33:02.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038716: ['FBtr0083777', 'FBtr0304745'] 2021-10-25 09:33:02.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051805: ['FBtr0340176', 'FBtr0273383', 'FBtr0304932'] 2021-10-25 09:33:02.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035336: ['FBtr0072890'] 2021-10-25 09:33:02.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035336 has a single transcript. 2021-10-25 09:33:02.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19603412, 19603833), (19603412, 19603778), (19604256, 19604315), (19604716, 19604877), (19605283, 19605348), (19605584, 19605844)] 2021-10-25 09:33:02.206 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035337: ['FBtr0072899'] 2021-10-25 09:33:02.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035337 has a single transcript. 2021-10-25 09:33:02.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035343: ['FBtr0072968'] 2021-10-25 09:33:02.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035343 has a single transcript. 2021-10-25 09:33:02.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000206: ['FBtr0084949'] 2021-10-25 09:33:02.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000206 has a single transcript. 2021-10-25 09:33:02.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035344: ['FBtr0072967'] 2021-10-25 09:33:02.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035344 has a single transcript. 2021-10-25 09:33:02.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035346: ['FBtr0072921', 'FBtr0072922', 'FBtr0072923', 'FBtr0344219'] 2021-10-25 09:33:02.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000212: ['FBtr0075523', 'FBtr0075524', 'FBtr0075525', 'FBtr0075526', 'FBtr0330160', 'FBtr0333580'] 2021-10-25 09:33:02.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16898377, 16898440), (16898387, 16898440), (16898678, 16898745), (16900042, 16900100), (16900046, 16900100), (16900299, 16900353)] 2021-10-25 09:33:02.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038717: ['FBtr0273217'] 2021-10-25 09:33:02.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038717 has a single transcript. 2021-10-25 09:33:02.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038718: ['FBtr0083779'] 2021-10-25 09:33:02.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038718 has a single transcript. 2021-10-25 09:33:02.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031871: ['FBtr0079366', 'FBtr0332325'] 2021-10-25 09:33:02.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038719: ['FBtr0083780'] 2021-10-25 09:33:02.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038719 has a single transcript. 2021-10-25 09:33:02.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038720: ['FBtr0083807', 'FBtr0083808', 'FBtr0083809', 'FBtr0083810', 'FBtr0334923', 'FBtr0334924'] 2021-10-25 09:33:02.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2488890, 2490979), (2489009, 2490979), (2490488, 2490979), (2490847, 2490979)] 2021-10-25 09:33:02.313 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6945069, 6945133)] 2021-10-25 09:33:02.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051806: ['FBtr0080952', 'FBtr0340237'] 2021-10-25 09:33:02.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025642: ['FBtr0070206', 'FBtr0342729'] 2021-10-25 09:33:02.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15971233, 15971293), (15972085, 15972158), (15975096, 15975225), (15975096, 15982122), (15975249, 15982122), (15982199, 15982267), (15982211, 15982267), (15982563, 15982802), (15982568, 15982802)] 2021-10-25 09:33:02.378 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15982267, 15982849, 'FBtr0075526_exon_1') contains intron (15982563, 15982802) 2021-10-25 09:33:02.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075526_exon_1'] 2021-10-25 09:33:02.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:02.383 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.383 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031872: ['FBtr0079365'] 2021-10-25 09:33:02.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031872 has a single transcript. 2021-10-25 09:33:02.403 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075525': ['FBtr0330160']} 2021-10-25 09:33:02.403 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330160']] 2021-10-25 09:33:02.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031873: ['FBtr0079364'] 2021-10-25 09:33:02.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031873 has a single transcript. 2021-10-25 09:33:02.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031874: ['FBtr0079363', 'FBtr0343775', 'FBtr0343776'] 2021-10-25 09:33:02.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1287934, 1287991)] 2021-10-25 09:33:02.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.420 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19616884, 19617252), (19617759, 19617832), (19618250, 19618474), (19618733, 19618795), (19619023, 19619084), (19619380, 19620614), (19619380, 19632333), (19619380, 19627443), (19619380, 19624405), (19619380, 19623315), (19619380, 19625326)] 2021-10-25 09:33:02.447 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051807: ['FBtr0080944', 'FBtr0344410'] 2021-10-25 09:33:02.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035348: ['FBtr0072963', 'FBtr0072964', 'FBtr0072965', 'FBtr0072966', 'FBtr0331414', 'FBtr0306577'] 2021-10-25 09:33:02.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6955202, 6955256), (6956219, 6956307), (6956219, 6956617)] 2021-10-25 09:33:02.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16682350, 16683609)] 2021-10-25 09:33:02.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025643: ['FBtr0301058', 'FBtr0301059', 'FBtr0301060', 'FBtr0301061', 'FBtr0332426'] 2021-10-25 09:33:02.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051809: ['FBtr0113414', 'FBtr0344852'] 2021-10-25 09:33:02.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031875: ['FBtr0079350'] 2021-10-25 09:33:02.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031875 has a single transcript. 2021-10-25 09:33:02.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031876: ['FBtr0079362'] 2021-10-25 09:33:02.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031876 has a single transcript. 2021-10-25 09:33:02.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031877: ['FBtr0079351', 'FBtr0343774'] 2021-10-25 09:33:02.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2499623, 2499690), (2500462, 2503142), (2500462, 2502390), (2500462, 2502594), (2500462, 2501069), (2501141, 2503142), (2501141, 2502594), (2502723, 2503142)] 2021-10-25 09:33:02.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16853862, 16853952), (16854398, 16854541), (16854652, 16854715), (16854838, 16858299)] 2021-10-25 09:33:02.615 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000216: ['FBtr0075621'] 2021-10-25 09:33:02.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000216 has a single transcript. 2021-10-25 09:33:02.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2919854, 2920009), (2920385, 2921385), (2921453, 2921537), (2922342, 2922415), (2922351, 2922415), (2923375, 2923682)] 2021-10-25 09:33:02.629 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2921385, 2922342, 'FBtr0301058_exon_2') contains intron (2921453, 2921537) 2021-10-25 09:33:02.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000221: ['FBtr0070638'] 2021-10-25 09:33:02.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000221 has a single transcript. 2021-10-25 09:33:02.630 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2921385, 2922342, 'FBtr0301060_exon_2') contains intron (2921453, 2921537) 2021-10-25 09:33:02.631 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2921385, 2922342, 'FBtr0301061_exon_3') contains intron (2921453, 2921537) 2021-10-25 09:33:02.631 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2921385, 2922351, 'FBtr0332426_exon_2') contains intron (2921453, 2921537) 2021-10-25 09:33:02.632 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2922415, 2924426, 'FBtr0332426_exon_3') contains intron (2923375, 2923682) 2021-10-25 09:33:02.632 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301058_exon_2', 'FBtr0301060_exon_2', 'FBtr0301061_exon_3', 'FBtr0332426_exon_2', 'FBtr0332426_exon_3'] 2021-10-25 09:33:02.632 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6960487, 6960546)] 2021-10-25 09:33:02.638 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000227: ['FBtr0077423'] 2021-10-25 09:33:02.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000227 has a single transcript. 2021-10-25 09:33:02.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000228: ['FBtr0079084', 'FBtr0079085', 'FBtr0302567', 'FBtr0302568', 'FBtr0342939', 'FBtr0310624', 'FBtr0310625'] 2021-10-25 09:33:02.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051810: ['FBtr0080925'] 2021-10-25 09:33:02.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051810 has a single transcript. 2021-10-25 09:33:02.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031878: ['FBtr0079357', 'FBtr0079358', 'FBtr0079359', 'FBtr0079360', 'FBtr0079361'] 2021-10-25 09:33:02.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051812: ['FBtr0290062'] 2021-10-25 09:33:02.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051812 has a single transcript. 2021-10-25 09:33:02.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051813: ['FBtr0080531', 'FBtr0343656'] 2021-10-25 09:33:02.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038721: ['FBtr0083805', 'FBtr0083806', 'FBtr0302492', 'FBtr0334921', 'FBtr0334922'] 2021-10-25 09:33:02.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:02.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6961830, 6961894), (6963554, 6963632), (6963554, 6963743), (6963554, 6963610), (6963554, 6963938), (6963855, 6963938)] 2021-10-25 09:33:02.806 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6961894, 6963619, 'FBtr0079361_exon_1') contains intron (6963554, 6963610) 2021-10-25 09:33:02.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079361_exon_1'] 2021-10-25 09:33:02.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051814: ['FBtr0080580', 'FBtr0343665'] 2021-10-25 09:33:02.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5272928, 5272985), (5273097, 5273160), (5273554, 5274018), (5273590, 5274018), (5275780, 5276287), (5275780, 5276511), (5276368, 5276511), (5276731, 5276935), (5277180, 5277957), (5277180, 5277246), (5277180, 5277933)] 2021-10-25 09:33:02.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19634152, 19634211), (19634350, 19635876), (19635982, 19636039), (19636215, 19636277), (19636739, 19636798), (19637002, 19637059), (19637618, 19637679), (19637791, 19637850), (19637971, 19638025), (19638194, 19638266), (19638427, 19638678), (19638427, 19638900), (19638750, 19638900), (19638969, 19639025), (19639413, 19641098), (19639413, 19642077), (19639413, 19640983)] 2021-10-25 09:33:02.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025644: ['FBtr0070563'] 2021-10-25 09:33:02.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025644 has a single transcript. 2021-10-25 09:33:02.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.831 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025645: ['FBtr0070552'] 2021-10-25 09:33:02.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025645 has a single transcript. 2021-10-25 09:33:02.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025674: ['FBtr0085941', 'FBtr0085942', 'FBtr0344022'] 2021-10-25 09:33:02.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265992: ['FBtr0343103'] 2021-10-25 09:33:02.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265992 has a single transcript. 2021-10-25 09:33:02.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265993: ['FBtr0343110'] 2021-10-25 09:33:02.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265993 has a single transcript. 2021-10-25 09:33:02.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265994: ['FBtr0343111'] 2021-10-25 09:33:02.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265994 has a single transcript. 2021-10-25 09:33:02.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13679117, 13684203), (13679117, 13683122), (13683209, 13684203), (13684263, 13684383), (13684548, 13687520), (13687658, 13689355), (13689484, 13689589), (13689745, 13689844), (13689884, 13689947), (13690013, 13690083), (13690289, 13690489), (13690531, 13713972), (13714166, 13717020), (13714311, 13717020)] 2021-10-25 09:33:02.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265995: ['FBtr0343104'] 2021-10-25 09:33:02.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265995 has a single transcript. 2021-10-25 09:33:02.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035355: ['FBtr0072929'] 2021-10-25 09:33:02.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035355 has a single transcript. 2021-10-25 09:33:02.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265996: ['FBtr0343106'] 2021-10-25 09:33:02.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265996 has a single transcript. 2021-10-25 09:33:02.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265997: ['FBtr0343107'] 2021-10-25 09:33:02.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265997 has a single transcript. 2021-10-25 09:33:02.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035356: ['FBtr0072930', 'FBtr0302434'] 2021-10-25 09:33:02.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265998: ['FBtr0299742', 'FBtr0299743', 'FBtr0299744', 'FBtr0299745', 'FBtr0299747', 'FBtr0299748', 'FBtr0299749', 'FBtr0299750', 'FBtr0299751', 'FBtr0299752', 'FBtr0299753', 'FBtr0308598', 'FBtr0308599', 'FBtr0308600', 'FBtr0336461'] 2021-10-25 09:33:02.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22129898, 22130098)] 2021-10-25 09:33:02.946 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22128263, 22130142, 'FBtr0085941_exon_1') contains intron (22129898, 22130098) 2021-10-25 09:33:02.946 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22124284, 22130142, 'FBtr0344022_exon_1') contains intron (22129898, 22130098) 2021-10-25 09:33:02.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085941_exon_1', 'FBtr0344022_exon_1'] 2021-10-25 09:33:02.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051815: ['FBtr0080870'] 2021-10-25 09:33:02.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051815 has a single transcript. 2021-10-25 09:33:02.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2600445, 2600821), (2600959, 2601020)] 2021-10-25 09:33:02.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051816: ['FBtr0080868'] 2021-10-25 09:33:02.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:02.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051816 has a single transcript. 2021-10-25 09:33:02.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:02.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051820: ['FBtr0080807', 'FBtr0305220'] 2021-10-25 09:33:02.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259244: ['FBtr0299894', 'FBtr0303650', 'FBtr0305005', 'FBtr0305006', 'FBtr0336775', 'FBtr0336776', 'FBtr0336777', 'FBtr0336778', 'FBtr0336779', 'FBtr0336780', 'FBtr0336781', 'FBtr0336782'] 2021-10-25 09:33:03.020 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16006094, 16006166), (16006115, 16006166)] 2021-10-25 09:33:03.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035357: ['FBtr0072931', 'FBtr0072932', 'FBtr0072933', 'FBtr0072934', 'FBtr0072935', 'FBtr0072936', 'FBtr0290340'] 2021-10-25 09:33:03.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031879: ['FBtr0307072', 'FBtr0307073', 'FBtr0307074', 'FBtr0290119', 'FBtr0339664', 'FBtr0302162'] 2021-10-25 09:33:03.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038722: ['FBtr0083781'] 2021-10-25 09:33:03.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038722 has a single transcript. 2021-10-25 09:33:03.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051821: ['FBtr0080809', 'FBtr0346572'] 2021-10-25 09:33:03.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038723: ['FBtr0083803'] 2021-10-25 09:33:03.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038723 has a single transcript. 2021-10-25 09:33:03.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025676: ['FBtr0072603', 'FBtr0072604', 'FBtr0346537'] 2021-10-25 09:33:03.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038725: ['FBtr0083801', 'FBtr0345270', 'FBtr0345271'] 2021-10-25 09:33:03.159 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15901351, 15901404)] 2021-10-25 09:33:03.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19652867, 19652950), (19653563, 19653624), (19654923, 19654988), (19655672, 19657581), (19655672, 19656204), (19656372, 19657581)] 2021-10-25 09:33:03.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(708928, 708990), (709023, 709079), (709154, 709211), (709283, 709332), (709494, 709556), (709613, 709737), (710247, 710309)] 2021-10-25 09:33:03.180 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (709737, 710342, 'FBtr0072603_exon_1') contains intron (710247, 710309) 2021-10-25 09:33:03.181 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (709737, 710607, 'FBtr0346537_exon_1') contains intron (710247, 710309) 2021-10-25 09:33:03.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072603_exon_1', 'FBtr0346537_exon_1'] 2021-10-25 09:33:03.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000229: ['FBtr0080087', 'FBtr0302378', 'FBtr0300982'] 2021-10-25 09:33:03.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051822: ['FBtr0304145'] 2021-10-25 09:33:03.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051822 has a single transcript. 2021-10-25 09:33:03.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051823: ['FBtr0080810'] 2021-10-25 09:33:03.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051823 has a single transcript. 2021-10-25 09:33:03.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2631916, 2631976), (2631916, 2633537), (2632121, 2633537), (2632466, 2633537), (2633809, 2637067), (2636001, 2637067), (2636814, 2637067), (2636967, 2637067), (2639553, 2639614), (2639872, 2640025), (2640271, 2640336), (2640516, 2640577), (2640926, 2641011)] 2021-10-25 09:33:03.251 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2631714, 2632121, 'FBtr0290340_exon_1') contains intron (2631916, 2631976) 2021-10-25 09:33:03.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290340_exon_1'] 2021-10-25 09:33:03.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051824: ['FBtr0303311'] 2021-10-25 09:33:03.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051824 has a single transcript. 2021-10-25 09:33:03.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051826: ['FBtr0331280', 'FBtr0331281'] 2021-10-25 09:33:03.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10247773, 10247851), (10248135, 10248196), (10248461, 10248524), (10248722, 10248784), (10248914, 10249094), (10249259, 10250280)] 2021-10-25 09:33:03.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6973508, 6973573), (6973684, 6973744), (6975132, 6975513), (6975132, 6975730), (6975609, 6975730), (6975856, 6975924), (6976300, 6976372), (6981691, 6981759), (6983250, 6983315), (6983518, 6983582), (6985013, 6987118), (6987200, 6999741), (6999903, 7008399), (6999903, 7010292), (7008646, 7009872), (7008646, 7010292), (7008649, 7009872)] 2021-10-25 09:33:03.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025678: ['FBtr0080837', 'FBtr0345544'] 2021-10-25 09:33:03.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15771520, 15771576), (15771751, 15772027), (15772403, 15772462), (15772778, 15773010)] 2021-10-25 09:33:03.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038727: ['FBtr0301213'] 2021-10-25 09:33:03.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038727 has a single transcript. 2021-10-25 09:33:03.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28888248, 28888305), (28888534, 28889765), (28889358, 28889765), (28889884, 28890004), (28890100, 28900823), (28891991, 28893201), (28895062, 28900823), (28901022, 28919491), (28901022, 28901332), (28901539, 28919491), (28902806, 28919491), (28903575, 28907689), (28903575, 28905638), (28903575, 28905762), (28907337, 28907709), (28907337, 28919491), (28911177, 28919491), (28913167, 28914939), (28915414, 28916425), (28917457, 28919491), (28918219, 28919491), (28919567, 28920224), (28920291, 28920353), (28920467, 28920536), (28920627, 28920689), (28920860, 28920919), (28921089, 28921155), (28921269, 28921340), (28921269, 28921358), (28921549, 28921614)] 2021-10-25 09:33:03.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038730: ['FBtr0083798'] 2021-10-25 09:33:03.350 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28888072, 28888534, 'FBtr0299742_exon_1') contains intron (28888248, 28888305) 2021-10-25 09:33:03.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038730 has a single transcript. 2021-10-25 09:33:03.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16503171, 16512963), (16514176, 16550206), (16550286, 16550632), (16550740, 16550860), (16550740, 16551613), (16550929, 16551794), (16550929, 16551613), (16551667, 16551794), (16551965, 16552360), (16552466, 16556226), (16556324, 16569034), (16556324, 16565061), (16565424, 16565536), (16565605, 16565670), (16565766, 16565833), (16565878, 16565938), (16566001, 16569139), (16566001, 16569034), (16566001, 16566202), (16569061, 16569139), (16569193, 16569484), (16569682, 16570943), (16569682, 16570243)] 2021-10-25 09:33:03.352 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28888072, 28888534, 'FBtr0299745_exon_1') contains intron (28888248, 28888305) 2021-10-25 09:33:03.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299742_exon_1', 'FBtr0299745_exon_1'] 2021-10-25 09:33:03.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038731: ['FBtr0083797'] 2021-10-25 09:33:03.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038731 has a single transcript. 2021-10-25 09:33:03.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038732: ['FBtr0083789'] 2021-10-25 09:33:03.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038732 has a single transcript. 2021-10-25 09:33:03.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16356470, 16356539)] 2021-10-25 09:33:03.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038733: ['FBtr0083790'] 2021-10-25 09:33:03.372 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038733 has a single transcript. 2021-10-25 09:33:03.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038734: ['FBtr0083791'] 2021-10-25 09:33:03.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038734 has a single transcript. 2021-10-25 09:33:03.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051827: ['FBtr0080759'] 2021-10-25 09:33:03.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051827 has a single transcript. 2021-10-25 09:33:03.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038735: ['FBtr0083814', 'FBtr0083813', 'FBtr0335008', 'FBtr0335009', 'FBtr0335010', 'FBtr0301116'] 2021-10-25 09:33:03.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051832: ['FBtr0343688'] 2021-10-25 09:33:03.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051832 has a single transcript. 2021-10-25 09:33:03.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051835: ['FBtr0080667'] 2021-10-25 09:33:03.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051835 has a single transcript. 2021-10-25 09:33:03.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051840: ['FBtr0345758'] 2021-10-25 09:33:03.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051840 has a single transcript. 2021-10-25 09:33:03.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051845: ['FBtr0307578'] 2021-10-25 09:33:03.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051845 has a single transcript. 2021-10-25 09:33:03.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000233: ['FBtr0071379'] 2021-10-25 09:33:03.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000233 has a single transcript. 2021-10-25 09:33:03.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025679: ['FBtr0070735'] 2021-10-25 09:33:03.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025679 has a single transcript. 2021-10-25 09:33:03.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051848: ['FBtr0303784'] 2021-10-25 09:33:03.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051848 has a single transcript. 2021-10-25 09:33:03.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051849: ['FBtr0080490'] 2021-10-25 09:33:03.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051849 has a single transcript. 2021-10-25 09:33:03.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025680: ['FBtr0083736'] 2021-10-25 09:33:03.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025680 has a single transcript. 2021-10-25 09:33:03.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000239: ['FBtr0301342', 'FBtr0343875'] 2021-10-25 09:33:03.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051851: ['FBtr0080454', 'FBtr0345636'] 2021-10-25 09:33:03.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025681: ['FBtr0077644', 'FBtr0077645', 'FBtr0273230', 'FBtr0331653'] 2021-10-25 09:33:03.481 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:03.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21174975, 21175032), (21175224, 21175279), (21175681, 21175740), (21175933, 21176006), (21176376, 21176508), (21176605, 21176670), (21176971, 21177204), (21177509, 21177570), (21177678, 21179329)] 2021-10-25 09:33:03.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19847635, 19850011), (19850153, 19850208), (19850319, 19850763), (19850811, 19850869), (19850952, 19851064), (19851130, 19851831), (19851130, 19851341), (19851419, 19852022), (19851419, 19851831), (19851918, 19852019), (19851918, 19852022), (19852425, 19852482), (19852640, 19853547)] 2021-10-25 09:33:03.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2992947, 2993013), (2993377, 2993544), (2993409, 2993544), (2994408, 2994673), (2995070, 2995435), (2995070, 2995411), (2996435, 2996501), (2997059, 2997790), (2997059, 2997491), (2997530, 2997790)] 2021-10-25 09:33:03.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051852: ['FBtr0080466'] 2021-10-25 09:33:03.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051852 has a single transcript. 2021-10-25 09:33:03.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051855: ['FBtr0080467', 'FBtr0290000'] 2021-10-25 09:33:03.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000241: ['FBtr0072117', 'FBtr0346612'] 2021-10-25 09:33:03.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035358: ['FBtr0072949'] 2021-10-25 09:33:03.573 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035358 has a single transcript. 2021-10-25 09:33:03.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031881: ['FBtr0079389'] 2021-10-25 09:33:03.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031881 has a single transcript. 2021-10-25 09:33:03.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035359: ['FBtr0072937', 'FBtr0333445'] 2021-10-25 09:33:03.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031882: ['FBtr0079426', 'FBtr0079427', 'FBtr0079428', 'FBtr0309323'] 2021-10-25 09:33:03.603 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13369323, 13369385)] 2021-10-25 09:33:03.604 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13369203, 13370329, 'FBtr0290000_exon_1') contains intron (13369323, 13369385) 2021-10-25 09:33:03.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290000_exon_1'] 2021-10-25 09:33:03.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.616 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23528440, 23528499), (23528956, 23529008), (23529110, 23529165), (23529271, 23529338), (23529533, 23529591), (23529626, 23537148), (23537707, 23537763), (23537996, 23538084)] 2021-10-25 09:33:03.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.618 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2645464, 2645632)] 2021-10-25 09:33:03.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7032177, 7032244), (7032177, 7032236), (7032177, 7032321), (7032177, 7032310)] 2021-10-25 09:33:03.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051858: ['FBtr0080381'] 2021-10-25 09:33:03.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051858 has a single transcript. 2021-10-25 09:33:03.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051860: ['FBtr0302984', 'FBtr0302985'] 2021-10-25 09:33:03.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000244: ['FBtr0082119', 'FBtr0302382', 'FBtr0301093'] 2021-10-25 09:33:03.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025682: ['FBtr0089941', 'FBtr0089942'] 2021-10-25 09:33:03.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035360: ['FBtr0072938', 'FBtr0345027', 'FBtr0303022', 'FBtr0333446'] 2021-10-25 09:33:03.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12165585, 12165792), (12165592, 12165792)] 2021-10-25 09:33:03.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.723 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9528953, 9529253), (9528958, 9530739)] 2021-10-25 09:33:03.739 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9528237, 9533011, 'FBtr0301093_exon_1') contains intron (9528953, 9529253) 2021-10-25 09:33:03.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301093_exon_1'] 2021-10-25 09:33:03.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1299200, 1299318)] 2021-10-25 09:33:03.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038737: ['FBtr0083815'] 2021-10-25 09:33:03.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038737 has a single transcript. 2021-10-25 09:33:03.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038738: ['FBtr0083860', 'FBtr0083861', 'FBtr0302327'] 2021-10-25 09:33:03.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051861: ['FBtr0302986'] 2021-10-25 09:33:03.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051861 has a single transcript. 2021-10-25 09:33:03.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051862: ['FBtr0080350'] 2021-10-25 09:33:03.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051862 has a single transcript. 2021-10-25 09:33:03.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051864: ['FBtr0080288', 'FBtr0339524'] 2021-10-25 09:33:03.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031883: ['FBtr0089640', 'FBtr0089636', 'FBtr0344708', 'FBtr0344709', 'FBtr0344710', 'FBtr0344711', 'FBtr0344712'] 2021-10-25 09:33:03.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2648145, 2648412), (2648145, 2648221), (2648170, 2648412), (2648594, 2648663), (2648787, 2648855), (2649017, 2649071), (2649205, 2649256)] 2021-10-25 09:33:03.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025683: ['FBtr0078154', 'FBtr0078153', 'FBtr0078155', 'FBtr0100379'] 2021-10-25 09:33:03.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000246: ['FBtr0083194', 'FBtr0083195', 'FBtr0083196'] 2021-10-25 09:33:03.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19864191, 19864324), (19864191, 19864275)] 2021-10-25 09:33:03.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19862516, 19864393, 'FBtr0083861_exon_1') contains intron (19864191, 19864324) 2021-10-25 09:33:03.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083861_exon_1'] 2021-10-25 09:33:03.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11995943, 11996001)] 2021-10-25 09:33:03.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259245: ['FBtr0343091', 'FBtr0299898', 'FBtr0299899', 'FBtr0299900', 'FBtr0299901'] 2021-10-25 09:33:03.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15789889, 15789947), (15790184, 15790239), (15790314, 15790379), (15790892, 15790955), (15791348, 15791401), (15791584, 15791655), (15791878, 15791933), (15792472, 15792530), (15792472, 15792542)] 2021-10-25 09:33:03.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.921 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051865: ['FBtr0080289', 'FBtr0345286'] 2021-10-25 09:33:03.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(122994, 123080), (123629, 123693), (123794, 123855), (124024, 124086), (124920, 125076), (125266, 126109), (126227, 128799), (128942, 130507)] 2021-10-25 09:33:03.933 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (122623, 123629, 'FBtr0078155_exon_8') contains intron (122994, 123080) 2021-10-25 09:33:03.934 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (122623, 123629, 'FBtr0100379_exon_7') contains intron (122994, 123080) 2021-10-25 09:33:03.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078155_exon_8', 'FBtr0100379_exon_7'] 2021-10-25 09:33:03.934 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035370: ['FBtr0072969'] 2021-10-25 09:33:03.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035370 has a single transcript. 2021-10-25 09:33:03.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035371: ['FBtr0073016'] 2021-10-25 09:33:03.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035371 has a single transcript. 2021-10-25 09:33:03.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038739: ['FBtr0083816', 'FBtr0334307'] 2021-10-25 09:33:03.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11997703, 11997767)] 2021-10-25 09:33:03.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:03.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035372: ['FBtr0073015'] 2021-10-25 09:33:03.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035372 has a single transcript. 2021-10-25 09:33:03.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7032835, 7032903), (7032839, 7032903), (7033018, 7035074), (7033018, 7034198), (7033018, 7035406), (7033018, 7034483), (7034273, 7034483), (7034693, 7034764), (7034910, 7035406), (7034910, 7035074), (7034912, 7035406), (7035561, 7035636), (7036035, 7036184), (7036035, 7036187), (7036722, 7036811)] 2021-10-25 09:33:03.989 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7032720, 7033018, 'FBtr0089636_exon_1') contains intron (7032835, 7032903) 2021-10-25 09:33:03.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035374: ['FBtr0301626'] 2021-10-25 09:33:03.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035374 has a single transcript. 2021-10-25 09:33:03.989 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7032720, 7033018, 'FBtr0344708_exon_1') contains intron (7032835, 7032903) 2021-10-25 09:33:03.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7032720, 7033018, 'FBtr0344711_exon_1') contains intron (7032835, 7032903) 2021-10-25 09:33:03.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089636_exon_1', 'FBtr0344708_exon_1', 'FBtr0344711_exon_1'] 2021-10-25 09:33:03.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:03.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035375: ['FBtr0072972', 'FBtr0072973', 'FBtr0333442'] 2021-10-25 09:33:04.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19864925, 19864988), (19865297, 19866413)] 2021-10-25 09:33:04.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21424983, 21425128), (21425184, 21425484), (21425655, 21426583), (21426703, 21431597), (21431726, 21431960), (21432153, 21435402), (21435588, 21441617), (21435588, 21441584), (21441724, 21442421), (21441754, 21442421), (21442725, 21457550), (21442725, 21457465)] 2021-10-25 09:33:04.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051866: ['FBtr0080287'] 2021-10-25 09:33:04.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051866 has a single transcript. 2021-10-25 09:33:04.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051867: ['FBtr0080224', 'FBtr0343627'] 2021-10-25 09:33:04.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000247: ['FBtr0085484', 'FBtr0346613'] 2021-10-25 09:33:04.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2782413, 2782737), (2782496, 2782737), (2782555, 2782737), (2783472, 2783735), (2784501, 2784995)] 2021-10-25 09:33:04.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.070 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265999: ['FBtr0343127'] 2021-10-25 09:33:04.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265999 has a single transcript. 2021-10-25 09:33:04.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038740: ['FBtr0083859', 'FBtr0113250', 'FBtr0330034', 'FBtr0330035', 'FBtr0330036'] 2021-10-25 09:33:04.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:04.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266000: ['FBtr0343135', 'FBtr0343136', 'FBtr0343137', 'FBtr0343138', 'FBtr0343139', 'FBtr0343140', 'FBtr0343141', 'FBtr0343142', 'FBtr0345209'] 2021-10-25 09:33:04.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29807602, 29807804), (29808406, 29808468), (29809006, 29809288), (29809821, 29809892), (29810203, 29810265), (29810808, 29810863), (29811167, 29811226), (29811454, 29811514), (29811647, 29811707), (29811823, 29811883), (29812053, 29812106), (29812188, 29812255), (29812489, 29812545), (29812998, 29813060)] 2021-10-25 09:33:04.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025684: ['FBtr0077456'] 2021-10-25 09:33:04.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025684 has a single transcript. 2021-10-25 09:33:04.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025686: ['FBtr0078134', 'FBtr0330647'] 2021-10-25 09:33:04.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051869: ['FBtr0080189', 'FBtr0290245', 'FBtr0290246'] 2021-10-25 09:33:04.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000250: ['FBtr0080844', 'FBtr0080845', 'FBtr0080846', 'FBtr0080847', 'FBtr0337081'] 2021-10-25 09:33:04.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:04.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035379: ['FBtr0073011'] 2021-10-25 09:33:04.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035379 has a single transcript. 2021-10-25 09:33:04.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035380: ['FBtr0073010'] 2021-10-25 09:33:04.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035380 has a single transcript. 2021-10-25 09:33:04.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19867508, 19867574), (19868770, 19868854), (19868802, 19868854), (19869348, 19869409), (19871001, 19871331), (19871513, 19871572), (19871769, 19871841), (19872001, 19874200), (19874286, 19874344), (19874510, 19875168), (19874510, 19875397), (19874527, 19875168), (19874527, 19875397)] 2021-10-25 09:33:04.210 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19866878, 19868770, 'FBtr0083859_exon_9') contains intron (19867508, 19867574) 2021-10-25 09:33:04.211 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19865416, 19868770, 'FBtr0330034_exon_9') contains intron (19867508, 19867574) 2021-10-25 09:33:04.213 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19866878, 19868770, 'FBtr0330036_exon_9') contains intron (19867508, 19867574) 2021-10-25 09:33:04.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083859_exon_9', 'FBtr0330034_exon_9', 'FBtr0330036_exon_9'] 2021-10-25 09:33:04.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035382: ['FBtr0072977', 'FBtr0301497'] 2021-10-25 09:33:04.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10774665, 10774738), (10774840, 10775202), (10774931, 10775202), (10775286, 10775364), (10775478, 10775573), (10775744, 10788738), (10788977, 10800678), (10800739, 10800840)] 2021-10-25 09:33:04.219 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10800678, 10801109, 'FBtr0080189_exon_1') contains intron (10800739, 10800840) 2021-10-25 09:33:04.220 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10800678, 10801109, 'FBtr0290245_exon_1') contains intron (10800739, 10800840) 2021-10-25 09:33:04.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080189_exon_1', 'FBtr0290245_exon_1'] 2021-10-25 09:33:04.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.231 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083859': ['FBtr0330036']} 2021-10-25 09:33:04.231 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330036']] 2021-10-25 09:33:04.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259246: ['FBtr0305059', 'FBtr0305060', 'FBtr0305061', 'FBtr0305062', 'FBtr0299915', 'FBtr0299916', 'FBtr0300245', 'FBtr0300542', 'FBtr0336693'] 2021-10-25 09:33:04.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025687: ['FBtr0079495', 'FBtr0343404'] 2021-10-25 09:33:04.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2961874, 2961933), (2962030, 2962094), (2962239, 2962288), (2962483, 2962556), (2962661, 2962722), (2962888, 2962937), (2963043, 2963121), (2963226, 2963295), (2963451, 2963559)] 2021-10-25 09:33:04.260 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2962288, 2962661, 'FBtr0301497_exon_4') contains intron (2962483, 2962556) 2021-10-25 09:33:04.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301497_exon_4'] 2021-10-25 09:33:04.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031885: ['FBtr0110978', 'FBtr0079402', 'FBtr0079401'] 2021-10-25 09:33:04.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16313450, 16314450), (16314708, 16314769), (16314858, 16322959), (16323170, 16323339), (16323517, 16324332), (16325054, 16326020), (16325054, 16325493)] 2021-10-25 09:33:04.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7791876, 7791938), (7792115, 7792174), (7793330, 7793508), (7794083, 7794147), (7794526, 7794591), (7794768, 7795509), (7795653, 7795774)] 2021-10-25 09:33:04.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.308 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4928129, 4928216), (4928132, 4928216), (4929308, 4929373), (4930065, 4931057), (4930065, 4935390), (4930065, 4937974), (4930065, 4931950), (4930065, 4930914), (4930065, 4936012), (4930065, 4932547)] 2021-10-25 09:33:04.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051870: ['FBtr0080137', 'FBtr0080138', 'FBtr0342583', 'FBtr0342584'] 2021-10-25 09:33:04.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035383: ['FBtr0072978'] 2021-10-25 09:33:04.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035383 has a single transcript. 2021-10-25 09:33:04.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035384: ['FBtr0072979', 'FBtr0332084'] 2021-10-25 09:33:04.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038741: ['FBtr0083858'] 2021-10-25 09:33:04.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038741 has a single transcript. 2021-10-25 09:33:04.360 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7056536, 7057347), (7057156, 7057223), (7057674, 7057863), (7058325, 7058392), (7059198, 7060965)] 2021-10-25 09:33:04.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038742: ['FBtr0083817'] 2021-10-25 09:33:04.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038742 has a single transcript. 2021-10-25 09:33:04.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038744: ['FBtr0301117', 'FBtr0344260', 'FBtr0308828', 'FBtr0308829'] 2021-10-25 09:33:04.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025692: ['FBtr0087813', 'FBtr0087814', 'FBtr0332884', 'FBtr0332885'] 2021-10-25 09:33:04.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2995264, 2995322), (2995264, 2995334)] 2021-10-25 09:33:04.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10790367, 10790415), (10790367, 10790426), (10790709, 10790782)] 2021-10-25 09:33:04.435 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10790221, 10790758, 'FBtr0342584_exon_1') contains intron (10790367, 10790415) 2021-10-25 09:33:04.435 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342584_exon_1'] 2021-10-25 09:33:04.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035385: ['FBtr0072980', 'FBtr0340706', 'FBtr0332085'] 2021-10-25 09:33:04.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19891254, 19892516), (19891254, 19892532), (19891254, 19892599), (19894015, 19894085), (19894213, 19896309), (19896401, 19896461), (19896695, 19897380), (19897651, 19897744), (19897651, 19897762), (19898194, 19898252), (19898411, 19898474)] 2021-10-25 09:33:04.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12875779, 12875841), (12875943, 12876100), (12876183, 12876261), (12876207, 12876771), (12876472, 12876771)] 2021-10-25 09:33:04.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.471 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12876100, 12876393, 'FBtr0332884_exon_1') contains intron (12876183, 12876261) 2021-10-25 09:33:04.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332884_exon_1'] 2021-10-25 09:33:04.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031886: ['FBtr0079424'] 2021-10-25 09:33:04.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031886 has a single transcript. 2021-10-25 09:33:04.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031887: ['FBtr0289952'] 2021-10-25 09:33:04.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031887 has a single transcript. 2021-10-25 09:33:04.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9503845, 9505003), (9505468, 9507862), (9505468, 9509887), (9508253, 9509887), (9508253, 9508926), (9509170, 9509887), (9510004, 9510220), (9510654, 9510831), (9511078, 9511143), (9511199, 9522937), (9511199, 9527287), (9517572, 9527287), (9524293, 9527287), (9527377, 9527436), (9527377, 9527445), (9527682, 9528138), (9528627, 9528970), (9528627, 9530089), (9528627, 9529677), (9528633, 9530089), (9529003, 9530089), (9529716, 9530089), (9530206, 9533801), (9530206, 9532345), (9532528, 9532663), (9532984, 9533801), (9532984, 9533345), (9533534, 9533801), (9535568, 9535840), (9536092, 9536151), (9536594, 9536804), (9536939, 9537012), (9537076, 9537138)] 2021-10-25 09:33:04.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031888: ['FBtr0079423'] 2021-10-25 09:33:04.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031888 has a single transcript. 2021-10-25 09:33:04.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3002295, 3008528), (3003721, 3008528)] 2021-10-25 09:33:04.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031893: ['FBtr0079405', 'FBtr0113028'] 2021-10-25 09:33:04.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000251: ['FBtr0081412', 'FBtr0081413', 'FBtr0335152'] 2021-10-25 09:33:04.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7182639, 7182706), (7182899, 7183502), (7182899, 7183162), (7183322, 7183777), (7183665, 7183777), (7183815, 7183871), (7183986, 7184042), (7184203, 7184614), (7185074, 7185137)] 2021-10-25 09:33:04.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20771909, 20776566), (20771909, 20781798), (20776620, 20781798)] 2021-10-25 09:33:04.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035388: ['FBtr0072981', 'FBtr0345028', 'FBtr0345029'] 2021-10-25 09:33:04.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051871: ['FBtr0080104'] 2021-10-25 09:33:04.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051871 has a single transcript. 2021-10-25 09:33:04.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031894: ['FBtr0079419', 'FBtr0342654', 'FBtr0342655'] 2021-10-25 09:33:04.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038745: ['FBtr0083855', 'FBtr0344261', 'FBtr0344262'] 2021-10-25 09:33:04.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051872: ['FBtr0080099', 'FBtr0345637'] 2021-10-25 09:33:04.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025693: ['FBtr0086053', 'FBtr0086054', 'FBtr0086055', 'FBtr0086056'] 2021-10-25 09:33:04.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10642093, 10642176), (10642716, 10642783), (10642939, 10642997)] 2021-10-25 09:33:04.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19897645, 19899152), (19899327, 19899613), (19899808, 19899873), (19900095, 19900224), (19900374, 19900431), (19901810, 19902840)] 2021-10-25 09:33:04.679 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19898828, 19899808, 'FBtr0083855_exon_5') contains intron (19899327, 19899613) 2021-10-25 09:33:04.680 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19898543, 19899808, 'FBtr0344262_exon_5') contains intron (19899327, 19899613) 2021-10-25 09:33:04.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083855_exon_5', 'FBtr0344262_exon_5'] 2021-10-25 09:33:04.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7186766, 7186831), (7187641, 7187946), (7187641, 7189484)] 2021-10-25 09:33:04.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266001: ['FBtr0343164'] 2021-10-25 09:33:04.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266001 has a single transcript. 2021-10-25 09:33:04.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3035364, 3036490), (3036661, 3036728), (3036901, 3037783), (3037961, 3038122), (3038567, 3038728), (3038905, 3038963), (3039257, 3039325), (3039515, 3039578), (3039818, 3039926)] 2021-10-25 09:33:04.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266002: ['FBtr0343156'] 2021-10-25 09:33:04.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266002 has a single transcript. 2021-10-25 09:33:04.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266003: ['FBtr0343153', 'FBtr0343154'] 2021-10-25 09:33:04.702 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072981': ['FBtr0345028']} 2021-10-25 09:33:04.703 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0345028']] 2021-10-25 09:33:04.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000253: ['FBtr0088001', 'FBtr0088002', 'FBtr0345018', 'FBtr0304963', 'FBtr0304964'] 2021-10-25 09:33:04.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051874: ['FBtr0079964'] 2021-10-25 09:33:04.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051874 has a single transcript. 2021-10-25 09:33:04.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051875: ['FBtr0079973', 'FBtr0303883', 'FBtr0303884', 'FBtr0308121'] 2021-10-25 09:33:04.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5775070, 5775125), (5775196, 5775259), (5775429, 5775729), (5775856, 5776321), (5776591, 5777363), (5777517, 5777711), (5777874, 5777988), (5778126, 5778200), (5778627, 5782714), (5778713, 5782776), (5778713, 5782714), (5778713, 5782298)] 2021-10-25 09:33:04.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035390: ['FBtr0073005'] 2021-10-25 09:33:04.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035390 has a single transcript. 2021-10-25 09:33:04.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6359525, 6359611), (6359571, 6359909)] 2021-10-25 09:33:04.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035392: ['FBtr0072986', 'FBtr0072987', 'FBtr0072988', 'FBtr0072989'] 2021-10-25 09:33:04.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038746: ['FBtr0083854'] 2021-10-25 09:33:04.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038746 has a single transcript. 2021-10-25 09:33:04.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038747: ['FBtr0083821', 'FBtr0344351', 'FBtr0344352', 'FBtr0344353', 'FBtr0344354'] 2021-10-25 09:33:04.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031895: ['FBtr0079418', 'FBtr0302948'] 2021-10-25 09:33:04.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266004: ['FBtr0343150'] 2021-10-25 09:33:04.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266004 has a single transcript. 2021-10-25 09:33:04.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266005: ['FBtr0343175', 'FBtr0343176', 'FBtr0343177'] 2021-10-25 09:33:04.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9996492, 10002187), (9996492, 10002183), (10002237, 10002296), (10002342, 10002527), (10002342, 10002405), (10002617, 10002675)] 2021-10-25 09:33:04.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10002405, 10002736, 'FBtr0303884_exon_1') contains intron (10002617, 10002675) 2021-10-25 09:33:04.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10002527, 10002736, 'FBtr0308121_exon_1') contains intron (10002617, 10002675) 2021-10-25 09:33:04.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303884_exon_1', 'FBtr0308121_exon_1'] 2021-10-25 09:33:04.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.829 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12259458, 12260039), (12260188, 12264742), (12264675, 12264742), (12264917, 12269192), (12269435, 12273765)] 2021-10-25 09:33:04.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.831 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.851 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7192050, 7192491), (7193373, 7194349)] 2021-10-25 09:33:04.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3052856, 3052933), (3053027, 3053240), (3053500, 3053551), (3053740, 3053797), (3054250, 3054316), (3054480, 3054539)] 2021-10-25 09:33:04.855 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3052513, 3053027, 'FBtr0072986_exon_1') contains intron (3052856, 3052933) 2021-10-25 09:33:04.855 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3053240, 3053740, 'FBtr0072986_exon_2') contains intron (3053500, 3053551) 2021-10-25 09:33:04.855 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3053240, 3053740, 'FBtr0072987_exon_3') contains intron (3053500, 3053551) 2021-10-25 09:33:04.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3052513, 3053027, 'FBtr0072989_exon_1') contains intron (3052856, 3052933) 2021-10-25 09:33:04.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3053240, 3053740, 'FBtr0072989_exon_2') contains intron (3053500, 3053551) 2021-10-25 09:33:04.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3054316, 3054906, 'FBtr0072989_exon_4') contains intron (3054480, 3054539) 2021-10-25 09:33:04.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072986_exon_1', 'FBtr0072986_exon_2', 'FBtr0072987_exon_3', 'FBtr0072989_exon_1', 'FBtr0072989_exon_2', 'FBtr0072989_exon_4'] 2021-10-25 09:33:04.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1047425, 1088619), (1047425, 1082466), (1047425, 1088521), (1087691, 1087757), (1088571, 1088619)] 2021-10-25 09:33:04.883 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1087757, 1088866, 'FBtr0343177_exon_3') contains intron (1088571, 1088619) 2021-10-25 09:33:04.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343177_exon_3'] 2021-10-25 09:33:04.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025697: ['FBtr0079464', 'FBtr0346571'] 2021-10-25 09:33:04.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259247: ['FBtr0299918', 'FBtr0299920', 'FBtr0299921', 'FBtr0301063', 'FBtr0335262'] 2021-10-25 09:33:04.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19905360, 19905630), (19905887, 19908433), (19908609, 19910892), (19910832, 19910892), (19911859, 19912314), (19911859, 19912311)] 2021-10-25 09:33:04.914 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:04.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031896: ['FBtr0079416', 'FBtr0079417'] 2021-10-25 09:33:04.944 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7446353, 7446415), (7446935, 7446995), (7447301, 7447506), (7447687, 7450948)] 2021-10-25 09:33:04.945 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7447506, 7451244, 'FBtr0346571_exon_1') contains intron (7447687, 7450948) 2021-10-25 09:33:04.945 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346571_exon_1'] 2021-10-25 09:33:04.945 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7195640, 7195702), (7196052, 7196111), (7196235, 7196312), (7196695, 7196750), (7196857, 7203934), (7196857, 7203938)] 2021-10-25 09:33:04.967 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7196312, 7196857, 'FBtr0079417_exon_2') contains intron (7196695, 7196750) 2021-10-25 09:33:04.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079417_exon_2'] 2021-10-25 09:33:04.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:04.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051876: ['FBtr0079897'] 2021-10-25 09:33:04.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051876 has a single transcript. 2021-10-25 09:33:04.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051882: ['FBtr0079853'] 2021-10-25 09:33:04.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051882 has a single transcript. 2021-10-25 09:33:04.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051885: ['FBtr0079820'] 2021-10-25 09:33:04.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051885 has a single transcript. 2021-10-25 09:33:04.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266007: ['FBtr0343187'] 2021-10-25 09:33:04.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266007 has a single transcript. 2021-10-25 09:33:04.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051888: ['FBtr0079752'] 2021-10-25 09:33:04.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051888 has a single transcript. 2021-10-25 09:33:05.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266008: ['FBtr0343193'] 2021-10-25 09:33:05.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266008 has a single transcript. 2021-10-25 09:33:05.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051889: ['FBtr0079728'] 2021-10-25 09:33:05.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051889 has a single transcript. 2021-10-25 09:33:05.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025700: ['FBtr0079900', 'FBtr0445309'] 2021-10-25 09:33:05.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266009: ['FBtr0343194'] 2021-10-25 09:33:05.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266009 has a single transcript. 2021-10-25 09:33:05.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051890: ['FBtr0079729'] 2021-10-25 09:33:05.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051890 has a single transcript. 2021-10-25 09:33:05.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035393: ['FBtr0072990'] 2021-10-25 09:33:05.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035393 has a single transcript. 2021-10-25 09:33:05.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051892: ['FBtr0079702'] 2021-10-25 09:33:05.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266010: ['FBtr0343200'] 2021-10-25 09:33:05.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051892 has a single transcript. 2021-10-25 09:33:05.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266010 has a single transcript. 2021-10-25 09:33:05.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266011: ['FBtr0343203'] 2021-10-25 09:33:05.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266011 has a single transcript. 2021-10-25 09:33:05.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051895: ['FBtr0079692'] 2021-10-25 09:33:05.025 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051895 has a single transcript. 2021-10-25 09:33:05.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5414081, 5423749), (5416417, 5423749), (5424239, 5435651), (5436412, 5439569), (5439754, 5440609), (5439754, 5453280), (5440805, 5454420), (5440805, 5440857), (5441070, 5446534), (5446765, 5446827), (5453476, 5453558), (5453476, 5454420)] 2021-10-25 09:33:05.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031897: ['FBtr0079414', 'FBtr0110799', 'FBtr0330197', 'FBtr0330198', 'FBtr0330199'] 2021-10-25 09:33:05.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051896: ['FBtr0079677'] 2021-10-25 09:33:05.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051896 has a single transcript. 2021-10-25 09:33:05.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051897: ['FBtr0079673'] 2021-10-25 09:33:05.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051897 has a single transcript. 2021-10-25 09:33:05.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266019: ['FBtr0305603', 'FBtr0305604', 'FBtr0305605', 'FBtr0305606', 'FBtr0333015'] 2021-10-25 09:33:05.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051898: ['FBtr0079662'] 2021-10-25 09:33:05.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051898 has a single transcript. 2021-10-25 09:33:05.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035397: ['FBtr0072995', 'FBtr0072996', 'FBtr0072998', 'FBtr0072999', 'FBtr0073000', 'FBtr0073001', 'FBtr0073002', 'FBtr0073003', 'FBtr0072991', 'FBtr0072992', 'FBtr0072993', 'FBtr0072994', 'FBtr0113129', 'FBtr0113130', 'FBtr0113131', 'FBtr0332113'] 2021-10-25 09:33:05.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000256: ['FBtr0077511', 'FBtr0077512', 'FBtr0077513', 'FBtr0290077', 'FBtr0290078', 'FBtr0290079', 'FBtr0290080', 'FBtr0290081', 'FBtr0290082'] 2021-10-25 09:33:05.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051901: ['FBtr0079607'] 2021-10-25 09:33:05.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051901 has a single transcript. 2021-10-25 09:33:05.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051902: ['FBtr0110841'] 2021-10-25 09:33:05.058 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9917867, 9917933)] 2021-10-25 09:33:05.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051902 has a single transcript. 2021-10-25 09:33:05.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051907: ['FBtr0079425', 'FBtr0344736'] 2021-10-25 09:33:05.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7060767, 7060831)] 2021-10-25 09:33:05.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.111 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038749: ['FBtr0083852'] 2021-10-25 09:33:05.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038749 has a single transcript. 2021-10-25 09:33:05.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038750: ['FBtr0083851'] 2021-10-25 09:33:05.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038750 has a single transcript. 2021-10-25 09:33:05.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038751: ['FBtr0083822'] 2021-10-25 09:33:05.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038751 has a single transcript. 2021-10-25 09:33:05.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038752: ['FBtr0083850'] 2021-10-25 09:33:05.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038752 has a single transcript. 2021-10-25 09:33:05.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025702: ['FBtr0078496', 'FBtr0304724', 'FBtr0303599', 'FBtr0303600', 'FBtr0306594', 'FBtr0306595', 'FBtr0306596', 'FBtr0306597', 'FBtr0334748', 'FBtr0334749', 'FBtr0334750'] 2021-10-25 09:33:05.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038753: ['FBtr0083849'] 2021-10-25 09:33:05.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038753 has a single transcript. 2021-10-25 09:33:05.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7208099, 7208188), (7208343, 7208416), (7208581, 7209348), (7209438, 7209522), (7209462, 7209522), (7209653, 7218908), (7218853, 7218908), (7219130, 7219943), (7219130, 7219859), (7219130, 7219918)] 2021-10-25 09:33:05.153 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7218908, 7220033, 'FBtr0079414_exon_1') contains intron (7219130, 7219943) 2021-10-25 09:33:05.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7218908, 7220033, 'FBtr0330197_exon_1') contains intron (7219130, 7219943) 2021-10-25 09:33:05.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038755: ['FBtr0083846', 'FBtr0335240'] 2021-10-25 09:33:05.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079414_exon_1', 'FBtr0330197_exon_1'] 2021-10-25 09:33:05.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11817033, 11817235), (11818016, 11823282), (11818515, 11823282), (11824478, 11824789), (11825093, 11825157), (11826088, 11826155), (11826462, 11826536), (11826787, 11826864), (11827017, 11829514), (11827017, 11834712)] 2021-10-25 09:33:05.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11816897, 11818016, 'FBtr0305603_exon_1') contains intron (11817033, 11817235) 2021-10-25 09:33:05.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11816897, 11818016, 'FBtr0305604_exon_1') contains intron (11817033, 11817235) 2021-10-25 09:33:05.160 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11816897, 11818016, 'FBtr0305606_exon_1') contains intron (11817033, 11817235) 2021-10-25 09:33:05.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305603_exon_1', 'FBtr0305604_exon_1', 'FBtr0305606_exon_1'] 2021-10-25 09:33:05.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051908: ['FBtr0079429', 'FBtr0079430', 'FBtr0345638'] 2021-10-25 09:33:05.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19930532, 19937253), (19937438, 19937501), (19938050, 19938123), (19938456, 20006234), (20006659, 20008160)] 2021-10-25 09:33:05.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7025818, 7026156), (7026635, 7026723), (7026981, 7027193)] 2021-10-25 09:33:05.256 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7026723, 7027287, 'FBtr0079429_exon_1') contains intron (7026981, 7027193) 2021-10-25 09:33:05.257 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7026723, 7027389, 'FBtr0345638_exon_1') contains intron (7026981, 7027193) 2021-10-25 09:33:05.257 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079429_exon_1', 'FBtr0345638_exon_1'] 2021-10-25 09:33:05.258 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259481: ['FBtr0089330', 'FBtr0089331', 'FBtr0089332', 'FBtr0089333', 'FBtr0333217'] 2021-10-25 09:33:05.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3872947, 3873018), (3873322, 3873384), (3874395, 3874449), (3875302, 3878894), (3879067, 3879651), (3879067, 3884035), (3884518, 3886983), (3884518, 3889430), (3884518, 3893261), (3887556, 3889430), (3887556, 3893261), (3887556, 3888648), (3887799, 3893261), (3889784, 3889862), (3889784, 3893261), (3893604, 3902594), (3893604, 3895612)] 2021-10-25 09:33:05.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038756: ['FBtr0083823', 'FBtr0344285'] 2021-10-25 09:33:05.272 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3889430, 3890031, 'FBtr0290080_exon_1') contains intron (3889784, 3889862) 2021-10-25 09:33:05.272 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3889430, 3890031, 'FBtr0290081_exon_1') contains intron (3889784, 3889862) 2021-10-25 09:33:05.273 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290080_exon_1', 'FBtr0290081_exon_1'] 2021-10-25 09:33:05.273 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19948543, 19948607), (19948543, 19948598)] 2021-10-25 09:33:05.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266020: ['FBtr0343230'] 2021-10-25 09:33:05.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266020 has a single transcript. 2021-10-25 09:33:05.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266021: ['FBtr0343231'] 2021-10-25 09:33:05.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266021 has a single transcript. 2021-10-25 09:33:05.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266022: ['FBtr0343233'] 2021-10-25 09:33:05.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266022 has a single transcript. 2021-10-25 09:33:05.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051909: ['FBtr0300459', 'FBtr0300460'] 2021-10-25 09:33:05.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031900: ['FBtr0333353'] 2021-10-25 09:33:05.361 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031900 has a single transcript. 2021-10-25 09:33:05.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266023: ['FBtr0343232'] 2021-10-25 09:33:05.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266023 has a single transcript. 2021-10-25 09:33:05.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031902: ['FBtr0303251', 'FBtr0334800'] 2021-10-25 09:33:05.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266024: ['FBtr0343234'] 2021-10-25 09:33:05.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266024 has a single transcript. 2021-10-25 09:33:05.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266025: ['FBtr0343235'] 2021-10-25 09:33:05.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266025 has a single transcript. 2021-10-25 09:33:05.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266026: ['FBtr0343236'] 2021-10-25 09:33:05.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266026 has a single transcript. 2021-10-25 09:33:05.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266027: ['FBtr0343240'] 2021-10-25 09:33:05.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266027 has a single transcript. 2021-10-25 09:33:05.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038760: ['FBtr0083825'] 2021-10-25 09:33:05.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038760 has a single transcript. 2021-10-25 09:33:05.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266028: ['FBtr0343258'] 2021-10-25 09:33:05.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266028 has a single transcript. 2021-10-25 09:33:05.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266029: ['FBtr0343247'] 2021-10-25 09:33:05.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266029 has a single transcript. 2021-10-25 09:33:05.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038761: ['FBtr0307346'] 2021-10-25 09:33:05.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038761 has a single transcript. 2021-10-25 09:33:05.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7257564, 7257696), (7257637, 7257696)] 2021-10-25 09:33:05.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22275438, 22278822), (22277427, 22277787), (22278731, 22278822), (22279044, 22279107), (22279559, 22279613), (22279936, 22281231), (22279936, 22280158), (22279936, 22281678), (22280317, 22281231), (22280317, 22281678), (22280317, 22281234), (22281783, 22282561), (22282832, 22282903), (22283149, 22283202)] 2021-10-25 09:33:05.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266030: ['FBtr0343242'] 2021-10-25 09:33:05.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266030 has a single transcript. 2021-10-25 09:33:05.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11525513, 11525579), (11525676, 11527181), (11527342, 11558271), (11527342, 11561893), (11527342, 11541777), (11527342, 11527454), (11527816, 11534389), (11527816, 11534340), (11542834, 11552829)] 2021-10-25 09:33:05.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22282903, 22283423, 'FBtr0306594_exon_7') contains intron (22283149, 22283202) 2021-10-25 09:33:05.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22282903, 22284335, 'FBtr0306595_exon_7') contains intron (22283149, 22283202) 2021-10-25 09:33:05.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.414 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22282903, 22283423, 'FBtr0306597_exon_8') contains intron (22283149, 22283202) 2021-10-25 09:33:05.414 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22277374, 22278731, 'FBtr0334748_exon_1') contains intron (22277427, 22277787) 2021-10-25 09:33:05.415 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22282903, 22284335, 'FBtr0334748_exon_8') contains intron (22283149, 22283202) 2021-10-25 09:33:05.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038763: ['FBtr0083843', 'FBtr0307345', 'FBtr0344139'] 2021-10-25 09:33:05.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266031: ['FBtr0343245'] 2021-10-25 09:33:05.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266031 has a single transcript. 2021-10-25 09:33:05.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306594_exon_7', 'FBtr0306595_exon_7', 'FBtr0306597_exon_8', 'FBtr0334748_exon_1', 'FBtr0334748_exon_8'] 2021-10-25 09:33:05.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266032: ['FBtr0343248'] 2021-10-25 09:33:05.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266032 has a single transcript. 2021-10-25 09:33:05.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7335105, 7342836), (7343060, 7351182), (7351697, 7351818)] 2021-10-25 09:33:05.424 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.424 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266033: ['FBtr0343250'] 2021-10-25 09:33:05.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266033 has a single transcript. 2021-10-25 09:33:05.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266034: ['FBtr0343251'] 2021-10-25 09:33:05.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266034 has a single transcript. 2021-10-25 09:33:05.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266035: ['FBtr0343252'] 2021-10-25 09:33:05.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266035 has a single transcript. 2021-10-25 09:33:05.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3071189, 3073080), (3071189, 3071256), (3071297, 3073080), (3071307, 3073080), (3072616, 3073080), (3072686, 3073080), (3072760, 3073080), (3073478, 3083732), (3073478, 3079985), (3078044, 3083732), (3078187, 3083732), (3080028, 3083732), (3081760, 3083732), (3082227, 3083732), (3083809, 3084807), (3083809, 3085203), (3084900, 3085203), (3085800, 3085864), (3086336, 3086397), (3086514, 3086948), (3087069, 3087132), (3087255, 3087310), (3087440, 3087505), (3087642, 3087698), (3087890, 3087956), (3088119, 3088191)] 2021-10-25 09:33:05.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266036: ['FBtr0343253', 'FBtr0445830'] 2021-10-25 09:33:05.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3071132, 3071307, 'FBtr0073000_exon_1') contains intron (3071189, 3071256) 2021-10-25 09:33:05.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3071132, 3071297, 'FBtr0073002_exon_1') contains intron (3071189, 3071256) 2021-10-25 09:33:05.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3071132, 3071307, 'FBtr0072991_exon_1') contains intron (3071189, 3071256) 2021-10-25 09:33:05.455 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3071132, 3071307, 'FBtr0113130_exon_1') contains intron (3071189, 3071256) 2021-10-25 09:33:05.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073000_exon_1', 'FBtr0073002_exon_1', 'FBtr0072991_exon_1', 'FBtr0113130_exon_1'] 2021-10-25 09:33:05.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.481 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20019163, 20019224), (20019167, 20019228), (20019318, 20019464), (20019755, 20020347)] 2021-10-25 09:33:05.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051910: ['FBtr0079304'] 2021-10-25 09:33:05.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051910 has a single transcript. 2021-10-25 09:33:05.482 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.482 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031903: ['FBtr0303207'] 2021-10-25 09:33:05.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051912: ['FBtr0340166', 'FBtr0332036'] 2021-10-25 09:33:05.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031903 has a single transcript. 2021-10-25 09:33:05.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031904: ['FBtr0079469'] 2021-10-25 09:33:05.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031904 has a single transcript. 2021-10-25 09:33:05.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031905: ['FBtr0079438'] 2021-10-25 09:33:05.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031905 has a single transcript. 2021-10-25 09:33:05.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(989104, 989416), (989357, 989771), (990311, 990869)] 2021-10-25 09:33:05.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031906: ['FBtr0079468', 'FBtr0302588'] 2021-10-25 09:33:05.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5770124, 5770198)] 2021-10-25 09:33:05.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7391503, 7391645), (7391798, 7391860), (7392019, 7392075), (7392212, 7392273), (7392404, 7395528), (7392404, 7398237)] 2021-10-25 09:33:05.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266037: ['FBtr0343254'] 2021-10-25 09:33:05.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266037 has a single transcript. 2021-10-25 09:33:05.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266038: ['FBtr0343255'] 2021-10-25 09:33:05.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266038 has a single transcript. 2021-10-25 09:33:05.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266039: ['FBtr0343256'] 2021-10-25 09:33:05.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266039 has a single transcript. 2021-10-25 09:33:05.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266040: ['FBtr0343260'] 2021-10-25 09:33:05.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266040 has a single transcript. 2021-10-25 09:33:05.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266041: ['FBtr0343261'] 2021-10-25 09:33:05.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266041 has a single transcript. 2021-10-25 09:33:05.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038765: ['FBtr0083841'] 2021-10-25 09:33:05.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038765 has a single transcript. 2021-10-25 09:33:05.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051913: ['FBtr0079138'] 2021-10-25 09:33:05.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051913 has a single transcript. 2021-10-25 09:33:05.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266042: ['FBtr0343262'] 2021-10-25 09:33:05.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266042 has a single transcript. 2021-10-25 09:33:05.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266043: ['FBtr0343304'] 2021-10-25 09:33:05.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266043 has a single transcript. 2021-10-25 09:33:05.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051914: ['FBtr0079090'] 2021-10-25 09:33:05.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038766: ['FBtr0083830'] 2021-10-25 09:33:05.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051914 has a single transcript. 2021-10-25 09:33:05.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038766 has a single transcript. 2021-10-25 09:33:05.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266044: ['FBtr0343305'] 2021-10-25 09:33:05.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266044 has a single transcript. 2021-10-25 09:33:05.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051915: ['FBtr0079099'] 2021-10-25 09:33:05.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051915 has a single transcript. 2021-10-25 09:33:05.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038767: ['FBtr0083840'] 2021-10-25 09:33:05.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038767 has a single transcript. 2021-10-25 09:33:05.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266045: ['FBtr0343306', 'FBtr0343307', 'FBtr0343308'] 2021-10-25 09:33:05.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051921: ['FBtr0078096'] 2021-10-25 09:33:05.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051921 has a single transcript. 2021-10-25 09:33:05.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038768: ['FBtr0083831'] 2021-10-25 09:33:05.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038768 has a single transcript. 2021-10-25 09:33:05.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031907: ['FBtr0079439', 'FBtr0079440', 'FBtr0302587', 'FBtr0334838', 'FBtr0345288'] 2021-10-25 09:33:05.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051922: ['FBtr0077965'] 2021-10-25 09:33:05.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051922 has a single transcript. 2021-10-25 09:33:05.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038769: ['FBtr0083839'] 2021-10-25 09:33:05.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038769 has a single transcript. 2021-10-25 09:33:05.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051924: ['FBtr0077946'] 2021-10-25 09:33:05.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051924 has a single transcript. 2021-10-25 09:33:05.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038771: ['FBtr0083836', 'FBtr0083837'] 2021-10-25 09:33:05.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259482: ['FBtr0079983'] 2021-10-25 09:33:05.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259482 has a single transcript. 2021-10-25 09:33:05.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051926: ['FBtr0077931', 'FBtr0334818'] 2021-10-25 09:33:05.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259483: ['FBtr0307075', 'FBtr0086141'] 2021-10-25 09:33:05.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20057374, 20059566), (20057374, 20057441)] 2021-10-25 09:33:05.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000257: ['FBtr0074727', 'FBtr0074728', 'FBtr0331158'] 2021-10-25 09:33:05.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24325189, 24325266), (24325425, 24329634), (24329887, 24330018)] 2021-10-25 09:33:05.694 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.695 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6695831, 6695891), (6695843, 6695891), (6696265, 6696339)] 2021-10-25 09:33:05.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:05.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038772: ['FBtr0083835'] 2021-10-25 09:33:05.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038772 has a single transcript. 2021-10-25 09:33:05.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038773: ['FBtr0083864'] 2021-10-25 09:33:05.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038773 has a single transcript. 2021-10-25 09:33:05.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051928: ['FBtr0077929', 'FBtr0334817'] 2021-10-25 09:33:05.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7401438, 7403228), (7402985, 7403228), (7403361, 7403541), (7404163, 7404229)] 2021-10-25 09:33:05.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19566126, 19566214), (19567784, 19567906)] 2021-10-25 09:33:05.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7402903, 7403361, 'FBtr0079439_exon_1') contains intron (7402985, 7403228) 2021-10-25 09:33:05.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079439_exon_1'] 2021-10-25 09:33:05.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038774: ['FBtr0083866'] 2021-10-25 09:33:05.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038774 has a single transcript. 2021-10-25 09:33:05.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038775: ['FBtr0083874'] 2021-10-25 09:33:05.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038775 has a single transcript. 2021-10-25 09:33:05.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259676: ['FBtr0078241'] 2021-10-25 09:33:05.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259676 has a single transcript. 2021-10-25 09:33:05.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038783: ['FBtr0083901', 'FBtr0344245'] 2021-10-25 09:33:05.780 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074727': ['FBtr0331158']} 2021-10-25 09:33:05.781 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331158']] 2021-10-25 09:33:05.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259677: ['FBtr0333177', 'FBtr0333178'] 2021-10-25 09:33:05.805 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:05.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.807 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20304720, 20304781)] 2021-10-25 09:33:05.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266046: ['FBtr0343311'] 2021-10-25 09:33:05.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266046 has a single transcript. 2021-10-25 09:33:05.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266047: ['FBtr0343312'] 2021-10-25 09:33:05.836 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266047 has a single transcript. 2021-10-25 09:33:05.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22832438, 22866050), (22866942, 22867738), (22868001, 22876803), (22879726, 22880049), (22880555, 22881009)] 2021-10-25 09:33:05.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000259: ['FBtr0073558', 'FBtr0073562', 'FBtr0100540', 'FBtr0073560', 'FBtr0073561', 'FBtr0299569', 'FBtr0333204', 'FBtr0307896', 'FBtr0308084', 'FBtr0308085'] 2021-10-25 09:33:05.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266048: ['FBtr0343315'] 2021-10-25 09:33:05.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266048 has a single transcript. 2021-10-25 09:33:05.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266049: ['FBtr0343343'] 2021-10-25 09:33:05.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266049 has a single transcript. 2021-10-25 09:33:05.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266050: ['FBtr0343372'] 2021-10-25 09:33:05.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266050 has a single transcript. 2021-10-25 09:33:05.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266051: ['FBtr0343374'] 2021-10-25 09:33:05.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266051 has a single transcript. 2021-10-25 09:33:05.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266052: ['FBtr0343376'] 2021-10-25 09:33:05.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266052 has a single transcript. 2021-10-25 09:33:05.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051933: ['FBtr0077896'] 2021-10-25 09:33:05.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051933 has a single transcript. 2021-10-25 09:33:05.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038784: ['FBtr0083900'] 2021-10-25 09:33:05.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038784 has a single transcript. 2021-10-25 09:33:05.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266053: ['FBtr0083392', 'FBtr0339155'] 2021-10-25 09:33:05.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038787: ['FBtr0083899', 'FBtr0113252'] 2021-10-25 09:33:05.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051935: ['FBtr0077916'] 2021-10-25 09:33:05.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051935 has a single transcript. 2021-10-25 09:33:05.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051939: ['FBtr0077862'] 2021-10-25 09:33:05.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051939 has a single transcript. 2021-10-25 09:33:05.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051940: ['FBtr0077861'] 2021-10-25 09:33:05.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051940 has a single transcript. 2021-10-25 09:33:05.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051942: ['FBtr0077812'] 2021-10-25 09:33:05.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051942 has a single transcript. 2021-10-25 09:33:05.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025709: ['FBtr0088560', 'FBtr0088561', 'FBtr0088562'] 2021-10-25 09:33:05.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259678: ['FBtr0299929', 'FBtr0299930', 'FBtr0310326'] 2021-10-25 09:33:05.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051943: ['FBtr0077818'] 2021-10-25 09:33:05.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051943 has a single transcript. 2021-10-25 09:33:05.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051944: ['FBtr0077819'] 2021-10-25 09:33:05.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051944 has a single transcript. 2021-10-25 09:33:05.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051946: ['FBtr0077834'] 2021-10-25 09:33:05.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051946 has a single transcript. 2021-10-25 09:33:05.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17043688, 17043858), (17044672, 17044902), (17046431, 17046548), (17046794, 17046850)] 2021-10-25 09:33:05.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.939 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20326152, 20326315), (20326228, 20326315), (20326798, 20326872)] 2021-10-25 09:33:05.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051948: ['FBtr0077787', 'FBtr0077788'] 2021-10-25 09:33:05.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.945 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031908: ['FBtr0079441', 'FBtr0332522'] 2021-10-25 09:33:05.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2416379, 2416435)] 2021-10-25 09:33:05.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2415358, 2416720, 'FBtr0077787_exon_1') contains intron (2416379, 2416435) 2021-10-25 09:33:05.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077787_exon_1'] 2021-10-25 09:33:05.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9717900, 9719052), (9719230, 9719465), (9719748, 9719818), (9719971, 9720661), (9720765, 9721019), (9721257, 9723539), (9723743, 9723828), (9723919, 9744863)] 2021-10-25 09:33:05.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9078911, 9080115), (9078941, 9080115), (9080169, 9080227), (9080169, 9080230), (9080423, 9080476), (9080678, 9080740), (9081505, 9081569), (9081897, 9081964), (9082145, 9082206)] 2021-10-25 09:33:05.999 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:05.999 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:05.999 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266064: ['FBtr0083035', 'FBtr0083036', 'FBtr0083037', 'FBtr0333276'] 2021-10-25 09:33:06.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038788: ['FBtr0083882', 'FBtr0344243'] 2021-10-25 09:33:06.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7405382, 7405447), (7405772, 7405999), (7406186, 7408145)] 2021-10-25 09:33:06.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051949: ['FBtr0077757', 'FBtr0303208'] 2021-10-25 09:33:06.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20328673, 20328728), (20328820, 20328876), (20328973, 20329028)] 2021-10-25 09:33:06.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031909: ['FBtr0079467'] 2021-10-25 09:33:06.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031909 has a single transcript. 2021-10-25 09:33:06.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031910: ['FBtr0079442'] 2021-10-25 09:33:06.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031910 has a single transcript. 2021-10-25 09:33:06.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259680: ['FBtr0340086', 'FBtr0299936', 'FBtr0299937'] 2021-10-25 09:33:06.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2300504, 2300582)] 2021-10-25 09:33:06.115 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2300102, 2300795, 'FBtr0077757_exon_1') contains intron (2300504, 2300582) 2021-10-25 09:33:06.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077757_exon_1'] 2021-10-25 09:33:06.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15142294, 15142728), (15142864, 15142958), (15143826, 15144265), (15145239, 15146700), (15145239, 15147474), (15145239, 15145317), (15145239, 15147064)] 2021-10-25 09:33:06.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11792667, 11793442), (11792686, 11793442), (11792745, 11793442), (11792914, 11793442), (11792945, 11793442), (11792991, 11793442), (11793279, 11793442), (11793518, 11793797), (11793900, 11793973), (11794165, 11794818), (11795008, 11795104), (11795186, 11795600), (11795186, 11795731), (11795186, 11799992), (11795186, 11798294), (11795186, 11796603)] 2021-10-25 09:33:06.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031913: ['FBtr0079466'] 2021-10-25 09:33:06.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031913 has a single transcript. 2021-10-25 09:33:06.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038789: ['FBtr0336963'] 2021-10-25 09:33:06.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038789 has a single transcript. 2021-10-25 09:33:06.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025712: ['FBtr0072761', 'FBtr0346593'] 2021-10-25 09:33:06.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031914: ['FBtr0079446', 'FBtr0079447', 'FBtr0079448', 'FBtr0301152', 'FBtr0344858', 'FBtr0332530', 'FBtr0332531'] 2021-10-25 09:33:06.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038790: ['FBtr0083884'] 2021-10-25 09:33:06.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038790 has a single transcript. 2021-10-25 09:33:06.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038795: ['FBtr0083894'] 2021-10-25 09:33:06.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038795 has a single transcript. 2021-10-25 09:33:06.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038796: ['FBtr0083885'] 2021-10-25 09:33:06.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038796 has a single transcript. 2021-10-25 09:33:06.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038797: ['FBtr0083891', 'FBtr0334587'] 2021-10-25 09:33:06.176 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1649507, 1650713), (1650852, 1650912)] 2021-10-25 09:33:06.178 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051950: ['FBtr0077630', 'FBtr0332457'] 2021-10-25 09:33:06.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12432384, 12433095), (12432560, 12433095), (12433339, 12434988), (12435344, 12436012), (12436332, 12436537), (12436653, 12436711), (12436797, 12436857), (12436987, 12450284), (12441536, 12443006), (12447797, 12451073), (12450386, 12450794), (12450878, 12451073), (12451210, 12451272), (12451446, 12452219), (12452374, 12452442), (12452590, 12452677), (12452857, 12452916), (12453057, 12453141)] 2021-10-25 09:33:06.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20500567, 20500884), (20501583, 20501638), (20501832, 20501885)] 2021-10-25 09:33:06.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035398: ['FBtr0073124'] 2021-10-25 09:33:06.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035398 has a single transcript. 2021-10-25 09:33:06.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:06.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035400: ['FBtr0073115', 'FBtr0073116', 'FBtr0073117', 'FBtr0309235', 'FBtr0113132', 'FBtr0113133', 'FBtr0333894'] 2021-10-25 09:33:06.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025716: ['FBtr0086960'] 2021-10-25 09:33:06.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025716 has a single transcript. 2021-10-25 09:33:06.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025720: ['FBtr0086317', 'FBtr0086318', 'FBtr0086319', 'FBtr0336634'] 2021-10-25 09:33:06.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038798: ['FBtr0083887'] 2021-10-25 09:33:06.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038798 has a single transcript. 2021-10-25 09:33:06.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266065: ['FBtr0343390'] 2021-10-25 09:33:06.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266065 has a single transcript. 2021-10-25 09:33:06.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038799: ['FBtr0083888', 'FBtr0083889'] 2021-10-25 09:33:06.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266066: ['FBtr0343386'] 2021-10-25 09:33:06.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266066 has a single transcript. 2021-10-25 09:33:06.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051952: ['FBtr0077591', 'FBtr0343237'] 2021-10-25 09:33:06.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266067: ['FBtr0343393', 'FBtr0343394'] 2021-10-25 09:33:06.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7437788, 7443583), (7440851, 7443583), (7440958, 7443583), (7440962, 7443583), (7441756, 7443583), (7443832, 7443893), (7443985, 7444059), (7444213, 7444272), (7444398, 7444464), (7444643, 7444708), (7444859, 7444926)] 2021-10-25 09:33:06.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259682: ['FBtr0333163', 'FBtr0299942', 'FBtr0299943', 'FBtr0299944', 'FBtr0299945', 'FBtr0330006', 'FBtr0304051', 'FBtr0304052'] 2021-10-25 09:33:06.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20507901, 20507974), (20508251, 20508502), (20509043, 20509150), (20509454, 20510011), (20510093, 20512336)] 2021-10-25 09:33:06.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.332 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:06.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.333 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:06.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20255138, 20255196), (20255348, 20255407), (20255571, 20255627), (20255809, 20256082), (20255809, 20255885), (20256035, 20256435), (20256235, 20256435), (20256608, 20256689), (20256629, 20256689), (20257124, 20257197)] 2021-10-25 09:33:06.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266068: ['FBtr0343395'] 2021-10-25 09:33:06.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266068 has a single transcript. 2021-10-25 09:33:06.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038803: ['FBtr0083904', 'FBtr0083905', 'FBtr0083906', 'FBtr0083907', 'FBtr0083908', 'FBtr0345213'] 2021-10-25 09:33:06.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266069: ['FBtr0343396'] 2021-10-25 09:33:06.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266069 has a single transcript. 2021-10-25 09:33:06.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051953: ['FBtr0077575'] 2021-10-25 09:33:06.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051953 has a single transcript. 2021-10-25 09:33:06.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266070: ['FBtr0343397'] 2021-10-25 09:33:06.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266070 has a single transcript. 2021-10-25 09:33:06.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3129423, 3129586), (3129859, 3129925), (3130023, 3130091), (3130178, 3130238), (3130447, 3130511), (3131036, 3131108), (3131204, 3142827), (3131204, 3132308), (3132557, 3132632), (3133244, 3133948), (3133244, 3133648), (3133338, 3139750)] 2021-10-25 09:33:06.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051954: ['FBtr0077563'] 2021-10-25 09:33:06.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051954 has a single transcript. 2021-10-25 09:33:06.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3132308, 3133338, 'FBtr0113132_exon_2') contains intron (3132557, 3132632) 2021-10-25 09:33:06.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3132308, 3133244, 'FBtr0113133_exon_2') contains intron (3132557, 3132632) 2021-10-25 09:33:06.417 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3132308, 3133244, 'FBtr0333894_exon_2') contains intron (3132557, 3132632) 2021-10-25 09:33:06.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113132_exon_2', 'FBtr0113133_exon_2', 'FBtr0333894_exon_2'] 2021-10-25 09:33:06.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266071: ['FBtr0343398'] 2021-10-25 09:33:06.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266071 has a single transcript. 2021-10-25 09:33:06.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051955: ['FBtr0077540', 'FBtr0303782', 'FBtr0345543', 'FBtr0345639'] 2021-10-25 09:33:06.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266072: ['FBtr0343402'] 2021-10-25 09:33:06.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266072 has a single transcript. 2021-10-25 09:33:06.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266073: ['FBtr0452213'] 2021-10-25 09:33:06.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266073 has a single transcript. 2021-10-25 09:33:06.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266074: ['FBtr0343445'] 2021-10-25 09:33:06.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266074 has a single transcript. 2021-10-25 09:33:06.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266083: ['FBtr0072260', 'FBtr0303783', 'FBtr0343436'] 2021-10-25 09:33:06.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025724: ['FBtr0080469'] 2021-10-25 09:33:06.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3712068, 3712225), (3712445, 3712767), (3712445, 3712497)] 2021-10-25 09:33:06.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025724 has a single transcript. 2021-10-25 09:33:06.508 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025725: ['FBtr0072811', 'FBtr0072812'] 2021-10-25 09:33:06.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24186876, 24188356), (24187985, 24188356), (24189707, 24189766), (24190736, 24190796), (24190963, 24191026), (24194934, 24195000)] 2021-10-25 09:33:06.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18757388, 18757447), (18757388, 18757443), (18757522, 18758450), (18757522, 18758030), (18757522, 18757622), (18757928, 18758030), (18757977, 18758030), (18758126, 18758450), (18758126, 18758224), (18758284, 18758450), (18758574, 18758640), (18758583, 18758640), (18758880, 18758943), (18759293, 18759386), (18759616, 18759907), (18759622, 18760864)] 2021-10-25 09:33:06.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20561299, 20561356), (20561411, 20566428), (20561411, 20570601), (20566609, 20570601), (20570649, 20571089)] 2021-10-25 09:33:06.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20560864, 20561411, 'FBtr0083906_exon_1') contains intron (20561299, 20561356) 2021-10-25 09:33:06.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20560864, 20561411, 'FBtr0083907_exon_1') contains intron (20561299, 20561356) 2021-10-25 09:33:06.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20561146, 20561411, 'FBtr0345213_exon_1') contains intron (20561299, 20561356) 2021-10-25 09:33:06.547 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083906_exon_1', 'FBtr0083907_exon_1', 'FBtr0345213_exon_1'] 2021-10-25 09:33:06.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1643955, 1644011), (1645061, 1645169)] 2021-10-25 09:33:06.567 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1644011, 1645199, 'FBtr0072812_exon_1') contains intron (1645061, 1645169) 2021-10-25 09:33:06.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072812_exon_1'] 2021-10-25 09:33:06.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000261: ['FBtr0075058'] 2021-10-25 09:33:06.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000261 has a single transcript. 2021-10-25 09:33:06.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000273: ['FBtr0079851', 'FBtr0079852', 'FBtr0335495'] 2021-10-25 09:33:06.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031918: ['FBtr0079449', 'FBtr0330720'] 2021-10-25 09:33:06.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025726: ['FBtr0089245', 'FBtr0089246', 'FBtr0089247', 'FBtr0334487', 'FBtr0344971', 'FBtr0308805', 'FBtr0308806'] 2021-10-25 09:33:06.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051956: ['FBtr0114524', 'FBtr0333248'] 2021-10-25 09:33:06.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266084: ['FBtr0302085', 'FBtr0302086', 'FBtr0302583', 'FBtr0302584', 'FBtr0306630', 'FBtr0306631', 'FBtr0306632', 'FBtr0333888', 'FBtr0333889'] 2021-10-25 09:33:06.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9685202, 9696190), (9698233, 9698701), (9698233, 9699114), (9698431, 9699114)] 2021-10-25 09:33:06.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7466671, 7471535), (7471419, 7471535)] 2021-10-25 09:33:06.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3473302, 3473361), (3473704, 3473769), (3474198, 3474267)] 2021-10-25 09:33:06.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035401: ['FBtr0073023'] 2021-10-25 09:33:06.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035401 has a single transcript. 2021-10-25 09:33:06.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035402: ['FBtr0073114', 'FBtr0307308', 'FBtr0445725'] 2021-10-25 09:33:06.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031920: ['FBtr0079451', 'FBtr0301125'] 2021-10-25 09:33:06.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051957: ['FBtr0077514', 'FBtr0334833'] 2021-10-25 09:33:06.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7475871, 7475931), (7476444, 7476578), (7476711, 7476773)] 2021-10-25 09:33:06.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3147470, 3147531), (3148061, 3148248), (3148134, 3148248)] 2021-10-25 09:33:06.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000274: ['FBtr0085727', 'FBtr0335454'] 2021-10-25 09:33:06.797 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3871869, 3872172)] 2021-10-25 09:33:06.798 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(871654, 871719), (871846, 871911), (872074, 872126), (872225, 873213), (873571, 873634), (873926, 873993), (874160, 874245), (874467, 875202), (875484, 875542), (875710, 876113), (876239, 876295), (876454, 876516), (876789, 876869), (877194, 878850), (877194, 882960), (878992, 881842), (878992, 882616), (881949, 882960), (882723, 882960), (883081, 883142), (883362, 883566), (883641, 884045), (883641, 885759), (883641, 885453), (884120, 885453), (885462, 885759), (885891, 898392), (885891, 886964), (892840, 892893), (892949, 893504), (902234, 902306), (902582, 902825), (903282, 903336), (903471, 903632), (903471, 904360), (905963, 906027), (906997, 907073), (907550, 907619), (907924, 909078), (909184, 912186)] 2021-10-25 09:33:06.802 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (898392, 903282, 'FBtr0089245_exon_3') contains intron (902234, 902306) 2021-10-25 09:33:06.803 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (898392, 903282, 'FBtr0089246_exon_3') contains intron (902234, 902306) 2021-10-25 09:33:06.805 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (898392, 903282, 'FBtr0344971_exon_8') contains intron (902234, 902306) 2021-10-25 09:33:06.806 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (898392, 903282, 'FBtr0308805_exon_3') contains intron (902234, 902306) 2021-10-25 09:33:06.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089245_exon_3', 'FBtr0089246_exon_3', 'FBtr0344971_exon_8', 'FBtr0308805_exon_3'] 2021-10-25 09:33:06.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038804: ['FBtr0083950'] 2021-10-25 09:33:06.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038804 has a single transcript. 2021-10-25 09:33:06.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30695864, 30695926), (30696204, 30696258), (30696424, 30696504), (30696734, 30696791), (30696734, 30696794)] 2021-10-25 09:33:06.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031925: ['FBtr0079471'] 2021-10-25 09:33:06.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031925 has a single transcript. 2021-10-25 09:33:06.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038805: ['FBtr0083948', 'FBtr0083949'] 2021-10-25 09:33:06.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031926: ['FBtr0079472', 'FBtr0335486'] 2021-10-25 09:33:06.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259683: ['FBtr0344025', 'FBtr0334170', 'FBtr0336971'] 2021-10-25 09:33:06.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051958: ['FBtr0445666'] 2021-10-25 09:33:06.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051958 has a single transcript. 2021-10-25 09:33:06.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051960: ['FBtr0077494'] 2021-10-25 09:33:06.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051960 has a single transcript. 2021-10-25 09:33:06.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8754495, 8759329), (8759380, 8759439), (8762885, 8763049), (8763125, 8782547), (8766629, 8776996), (8766629, 8782547), (8777317, 8782547), (8782657, 8784998), (8785057, 8785120), (8785305, 8785375), (8785599, 8785693), (8785915, 8785971), (8786231, 8786299), (8786437, 8786621), (8786437, 8787518), (8787344, 8787518), (8787720, 8788938), (8789305, 8789370), (8789517, 8790169), (8790508, 8790584), (8791300, 8796999), (8797226, 8798120), (8797226, 8797689), (8797821, 8798120)] 2021-10-25 09:33:06.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035405: ['FBtr0073027', 'FBtr0073028'] 2021-10-25 09:33:06.881 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8796999, 8797821, 'FBtr0302583_exon_16') contains intron (8797226, 8797689) 2021-10-25 09:33:06.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051961: ['FBtr0077484', 'FBtr0077485'] 2021-10-25 09:33:06.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302583_exon_16'] 2021-10-25 09:33:06.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20575621, 20576145), (20576724, 20576805)] 2021-10-25 09:33:06.891 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20576145, 20577010, 'FBtr0083949_exon_1') contains intron (20576724, 20576805) 2021-10-25 09:33:06.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083949_exon_1'] 2021-10-25 09:33:06.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000276: ['FBtr0085612'] 2021-10-25 09:33:06.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000276 has a single transcript. 2021-10-25 09:33:06.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7608477, 7613351), (7614199, 7614325), (7614695, 7614842), (7615439, 7615575), (7615444, 7615575), (7615967, 7616116)] 2021-10-25 09:33:06.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000277: ['FBtr0085614'] 2021-10-25 09:33:06.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000277 has a single transcript. 2021-10-25 09:33:06.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000278: ['FBtr0085640'] 2021-10-25 09:33:06.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000278 has a single transcript. 2021-10-25 09:33:06.920 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3160099, 3160170)] 2021-10-25 09:33:06.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000279: ['FBtr0085616'] 2021-10-25 09:33:06.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000279 has a single transcript. 2021-10-25 09:33:06.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000280: ['FBtr0085613'] 2021-10-25 09:33:06.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000280 has a single transcript. 2021-10-25 09:33:06.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22189687, 22189744), (22189974, 22196250), (22196755, 22212724), (22196755, 22197857), (22196755, 22198290), (22213148, 22213205), (22213469, 22213530), (22214099, 22214162)] 2021-10-25 09:33:06.931 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.931 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000281: ['FBtr0089614'] 2021-10-25 09:33:06.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000281 has a single transcript. 2021-10-25 09:33:06.938 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4187499, 4187710), (4187499, 4187566)] 2021-10-25 09:33:06.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000283: ['FBtr0083126', 'FBtr0083127'] 2021-10-25 09:33:06.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031929: ['FBtr0079516', 'FBtr0335489'] 2021-10-25 09:33:06.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038806: ['FBtr0083909'] 2021-10-25 09:33:06.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038806 has a single transcript. 2021-10-25 09:33:06.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038808: ['FBtr0273271'] 2021-10-25 09:33:06.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038808 has a single transcript. 2021-10-25 09:33:06.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038809: ['FBtr0300803'] 2021-10-25 09:33:06.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038809 has a single transcript. 2021-10-25 09:33:06.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038810: ['FBtr0083911'] 2021-10-25 09:33:06.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038810 has a single transcript. 2021-10-25 09:33:06.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038811: ['FBtr0083944', 'FBtr0302323'] 2021-10-25 09:33:06.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035407: ['FBtr0073112', 'FBtr0329990'] 2021-10-25 09:33:06.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7689640, 7689719), (7690107, 7690171), (7690556, 7690682), (7690819, 7690878)] 2021-10-25 09:33:06.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051963: ['FBtr0077458'] 2021-10-25 09:33:06.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051963 has a single transcript. 2021-10-25 09:33:06.996 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:06.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:06.999 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15271990, 15272050), (15272991, 15273056), (15274056, 15274114), (15274611, 15275124)] 2021-10-25 09:33:07.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051971: ['FBtr0079064'] 2021-10-25 09:33:07.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051971 has a single transcript. 2021-10-25 09:33:07.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051973: ['FBtr0078163', 'FBtr0078164', 'FBtr0309225', 'FBtr0309226', 'FBtr0309227', 'FBtr0309228', 'FBtr0309229', 'FBtr0113416'] 2021-10-25 09:33:07.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20591611, 20591675), (20591952, 20592007), (20592493, 20592556), (20592493, 20592560)] 2021-10-25 09:33:07.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259685: ['FBtr0304726', 'FBtr0084603', 'FBtr0111008', 'FBtr0334925'] 2021-10-25 09:33:07.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.037 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3165264, 3165577), (3165901, 3165961), (3166051, 3166141)] 2021-10-25 09:33:07.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031930: ['FBtr0079515'] 2021-10-25 09:33:07.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031930 has a single transcript. 2021-10-25 09:33:07.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000286: ['FBtr0089647', 'FBtr0089648', 'FBtr0089649', 'FBtr0336835', 'FBtr0304887', 'FBtr0472669'] 2021-10-25 09:33:07.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031935: ['FBtr0302518'] 2021-10-25 09:33:07.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031935 has a single transcript. 2021-10-25 09:33:07.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031936: ['FBtr0079507'] 2021-10-25 09:33:07.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031936 has a single transcript. 2021-10-25 09:33:07.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025739: ['FBtr0070681'] 2021-10-25 09:33:07.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025739 has a single transcript. 2021-10-25 09:33:07.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031937: ['FBtr0300709', 'FBtr0343407'] 2021-10-25 09:33:07.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025740: ['FBtr0089179', 'FBtr0308297'] 2021-10-25 09:33:07.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038814: ['FBtr0113254', 'FBtr0330028'] 2021-10-25 09:33:07.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035409: ['FBtr0073111'] 2021-10-25 09:33:07.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035409 has a single transcript. 2021-10-25 09:33:07.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035410: ['FBtr0307018'] 2021-10-25 09:33:07.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035410 has a single transcript. 2021-10-25 09:33:07.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035412: ['FBtr0073038'] 2021-10-25 09:33:07.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035412 has a single transcript. 2021-10-25 09:33:07.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24295864, 24305200), (24305545, 24305890), (24306883, 24308195), (24306883, 24307353), (24306883, 24307012), (24307141, 24308195), (24307674, 24308195), (24308728, 24308807), (24308728, 24309024), (24308849, 24309024), (24309569, 24309629), (24309735, 24309800), (24309995, 24310060), (24310832, 24310897), (24311080, 24311147), (24312908, 24312976), (24313101, 24313162), (24313576, 24313648)] 2021-10-25 09:33:07.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035413: ['FBtr0073039'] 2021-10-25 09:33:07.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035413 has a single transcript. 2021-10-25 09:33:07.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7723837, 7723896), (7724103, 7724172), (7724301, 7724368), (7724517, 7724574), (7725044, 7725160), (7725249, 7725309), (7725473, 7725534), (7725666, 7725932)] 2021-10-25 09:33:07.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035414: ['FBtr0073109'] 2021-10-25 09:33:07.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035414 has a single transcript. 2021-10-25 09:33:07.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(33125, 33190), (33373, 35873), (36457, 36515), (41285, 42913)] 2021-10-25 09:33:07.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035415: ['FBtr0073108'] 2021-10-25 09:33:07.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035415 has a single transcript. 2021-10-25 09:33:07.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20612689, 20612745), (20612909, 20612965), (20613053, 20613319), (20613488, 20613546), (20614724, 20614792), (20615751, 20616579)] 2021-10-25 09:33:07.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035416: ['FBtr0073042'] 2021-10-25 09:33:07.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035416 has a single transcript. 2021-10-25 09:33:07.162 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0113254': ['FBtr0330028']} 2021-10-25 09:33:07.162 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330028']] 2021-10-25 09:33:07.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035420: ['FBtr0302302', 'FBtr0346807'] 2021-10-25 09:33:07.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038815: ['FBtr0083913'] 2021-10-25 09:33:07.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038815 has a single transcript. 2021-10-25 09:33:07.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038816: ['FBtr0112788', 'FBtr0334640', 'FBtr0334641'] 2021-10-25 09:33:07.212 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3211432, 3211494), (3213596, 3213653), (3214692, 3214754), (3215235, 3215297), (3217363, 3217419), (3217563, 3217617), (3217893, 3217945), (3218488, 3218544), (3218671, 3218751)] 2021-10-25 09:33:07.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025741: ['FBtr0089225', 'FBtr0089224', 'FBtr0089223', 'FBtr0309865'] 2021-10-25 09:33:07.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4879196, 4880377), (4879196, 4880293), (4880472, 4881214), (4882365, 4882864), (4882492, 4882864), (4882492, 4882888), (4882801, 4882864)] 2021-10-25 09:33:07.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.218 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031939: ['FBtr0079503', 'FBtr0079504', 'FBtr0079505', 'FBtr0114496'] 2021-10-25 09:33:07.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26688, 26765), (26964, 27052), (27490, 28014), (27490, 28410), (28240, 28732), (28639, 28732), (28926, 28981), (29068, 35745), (29068, 33844), (29068, 30393), (29068, 34557), (33270, 33844), (33270, 34557), (34288, 34557), (34604, 34719), (34912, 35745), (35212, 38534), (35212, 35745), (38298, 38534), (38731, 39300), (39857, 58080), (58176, 59189), (58182, 58248), (58182, 58958), (58182, 59189), (58182, 65345), (58193, 59189), (58350, 59189), (58731, 59189)] 2021-10-25 09:33:07.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.238 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0089647': ['FBtr0472669']} 2021-10-25 09:33:07.238 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0472669']] 2021-10-25 09:33:07.257 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20635656, 20635815), (20635656, 20636340), (20636088, 20636340), (20636275, 20636340), (20636500, 20636562), (20637822, 20637878), (20639753, 20639813), (20640299, 20640368), (20640744, 20640800), (20641877, 20641945), (20642473, 20642530), (20643363, 20643421), (20643854, 20643912)] 2021-10-25 09:33:07.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259697: ['FBtr0113473'] 2021-10-25 09:33:07.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259697 has a single transcript. 2021-10-25 09:33:07.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035421: ['FBtr0073043'] 2021-10-25 09:33:07.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035421 has a single transcript. 2021-10-25 09:33:07.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266086: ['FBtr0343493'] 2021-10-25 09:33:07.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266086 has a single transcript. 2021-10-25 09:33:07.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259699: ['FBtr0299952', 'FBtr0299953'] 2021-10-25 09:33:07.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266087: ['FBtr0343499'] 2021-10-25 09:33:07.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266087 has a single transcript. 2021-10-25 09:33:07.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035422: ['FBtr0073095', 'FBtr0073097', 'FBtr0073098', 'FBtr0302300', 'FBtr0302301', 'FBtr0306567'] 2021-10-25 09:33:07.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266088: ['FBtr0343500'] 2021-10-25 09:33:07.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266088 has a single transcript. 2021-10-25 09:33:07.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7727757, 7727828), (7728035, 7728095), (7728224, 7728284), (7728442, 7728506), (7728846, 7728903), (7729024, 7729084), (7729125, 7729179), (7729355, 7729418), (7729550, 7730197), (7730752, 7732478), (7730849, 7732516), (7730849, 7732478), (7730865, 7732478)] 2021-10-25 09:33:07.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266094: ['FBtr0343516'] 2021-10-25 09:33:07.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266094 has a single transcript. 2021-10-25 09:33:07.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266095: ['FBtr0343541'] 2021-10-25 09:33:07.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266095 has a single transcript. 2021-10-25 09:33:07.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266096: ['FBtr0343542'] 2021-10-25 09:33:07.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266096 has a single transcript. 2021-10-25 09:33:07.320 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1013768, 1014317), (1014526, 1014582), (1014728, 1014777), (1014908, 1014965), (1015301, 1015424), (1015352, 1015424), (1015620, 1016375), (1018709, 1018769), (1020015, 1022241), (1020015, 1026962), (1020015, 1026215), (1023680, 1026962), (1023680, 1026769), (1026535, 1027006)] 2021-10-25 09:33:07.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266097: ['FBtr0343543'] 2021-10-25 09:33:07.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266097 has a single transcript. 2021-10-25 09:33:07.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16095393, 16095457), (16095690, 16097012), (16097572, 16097702), (16100349, 16104803), (16100349, 16102818), (16103053, 16104803)] 2021-10-25 09:33:07.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266098: ['FBtr0344647', 'FBtr0344648', 'FBtr0344649', 'FBtr0344650', 'FBtr0344651', 'FBtr0344652', 'FBtr0344668'] 2021-10-25 09:33:07.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038818: ['FBtr0083936', 'FBtr0083937', 'FBtr0334642'] 2021-10-25 09:33:07.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259700: ['FBtr0299949', 'FBtr0299950', 'FBtr0299951', 'FBtr0310314', 'FBtr0310315', 'FBtr0310316'] 2021-10-25 09:33:07.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000287: ['FBtr0080235', 'FBtr0080236', 'FBtr0307093'] 2021-10-25 09:33:07.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3221283, 3221466), (3221709, 3221881), (3221981, 3222926), (3221981, 3222787), (3221981, 3222365), (3221981, 3222574), (3221981, 3222847), (3221981, 3222152)] 2021-10-25 09:33:07.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20652784, 20653150), (20653564, 20653726), (20654735, 20654851), (20656452, 20659517)] 2021-10-25 09:33:07.435 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031940: ['FBtr0079499'] 2021-10-25 09:33:07.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031940 has a single transcript. 2021-10-25 09:33:07.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031941: ['FBtr0079481'] 2021-10-25 09:33:07.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031941 has a single transcript. 2021-10-25 09:33:07.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025742: ['FBtr0079223', 'FBtr0345290'] 2021-10-25 09:33:07.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031942: ['FBtr0290272', 'FBtr0346499'] 2021-10-25 09:33:07.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11359761, 11366343), (11365369, 11366343), (11365635, 11366343), (11369008, 11369725), (11369886, 11371878), (11372140, 11372202), (11372435, 11372524), (11372722, 11372855)] 2021-10-25 09:33:07.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6035222, 6035277)] 2021-10-25 09:33:07.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.515 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7752814, 7753101)] 2021-10-25 09:33:07.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5085889, 5089341), (5086201, 5089341), (5090145, 5163900), (5090145, 5203310), (5165498, 5174896), (5176788, 5186902), (5187429, 5203310), (5203415, 5217430), (5217557, 5221240), (5221437, 5223918), (5224040, 5224140), (5224267, 5224355), (5224475, 5224686), (5224833, 5225236), (5225293, 5228326), (5225828, 5225913), (5225999, 5228326), (5228467, 5228875), (5229015, 5229190), (5229404, 5233411), (5229404, 5233441), (5233664, 5233771), (5233914, 5234023), (5234214, 5234318), (5234509, 5234698), (5237436, 5237521), (5237836, 5237898), (5238006, 5238116), (5238267, 5239425), (5238267, 5243376), (5240382, 5243376), (5243486, 5246522), (5243486, 5243882), (5244050, 5246522), (5249400, 5249469), (5249643, 5249748), (5250012, 5250077), (5250274, 5250422), (5250574, 5250728)] 2021-10-25 09:33:07.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16095393, 16095457), (16095396, 16095457), (16095690, 16095896), (16095690, 16095865), (16095690, 16097012), (16095690, 16096526), (16097572, 16097702), (16100349, 16104803), (16100349, 16102818), (16103053, 16104803)] 2021-10-25 09:33:07.547 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038819: ['FBtr0083919'] 2021-10-25 09:33:07.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038819 has a single transcript. 2021-10-25 09:33:07.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038820: ['FBtr0083935'] 2021-10-25 09:33:07.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038820 has a single transcript. 2021-10-25 09:33:07.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038821: ['FBtr0344115'] 2021-10-25 09:33:07.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038821 has a single transcript. 2021-10-25 09:33:07.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025743: ['FBtr0074285'] 2021-10-25 09:33:07.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025743 has a single transcript. 2021-10-25 09:33:07.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051974: ['FBtr0300987', 'FBtr0330644', 'FBtr0330645'] 2021-10-25 09:33:07.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025776: ['FBtr0333875'] 2021-10-25 09:33:07.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025776 has a single transcript. 2021-10-25 09:33:07.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031945: ['FBtr0079485', 'FBtr0343400'] 2021-10-25 09:33:07.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025777: ['FBtr0079306', 'FBtr0079307', 'FBtr0329892', 'FBtr0333346', 'FBtr0329893', 'FBtr0332330'] 2021-10-25 09:33:07.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038826: ['FBtr0083958', 'FBtr0083959', 'FBtr0083960', 'FBtr0083961', 'FBtr0083962', 'FBtr0083963', 'FBtr0113256', 'FBtr0334711', 'FBtr0334712', 'FBtr0334713', 'FBtr0334714', 'FBtr0334715', 'FBtr0334716', 'FBtr0334717', 'FBtr0334718', 'FBtr0334719', 'FBtr0334720'] 2021-10-25 09:33:07.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7767717, 7771261), (7771605, 7773068), (7773250, 7773464), (7773658, 7774224), (7773658, 7774200)] 2021-10-25 09:33:07.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(141340, 141395), (141609, 141661), (141609, 141670), (142662, 142723)] 2021-10-25 09:33:07.643 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (141661, 143091, 'FBtr0330645_exon_1') contains intron (142662, 142723) 2021-10-25 09:33:07.643 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330645_exon_1'] 2021-10-25 09:33:07.643 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000289: ['FBtr0087526', 'FBtr0087527', 'FBtr0087528', 'FBtr0087529', 'FBtr0339960', 'FBtr0339961', 'FBtr0339962', 'FBtr0112795', 'FBtr0290034', 'FBtr0290035', 'FBtr0346946'] 2021-10-25 09:33:07.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035423: ['FBtr0073044'] 2021-10-25 09:33:07.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035423 has a single transcript. 2021-10-25 09:33:07.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035424: ['FBtr0073045', 'FBtr0073046', 'FBtr0308061'] 2021-10-25 09:33:07.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031946: ['FBtr0079487', 'FBtr0343401'] 2021-10-25 09:33:07.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3225288, 3226876), (3226539, 3226876), (3227705, 3227774), (3228024, 3228091), (3228466, 3228621), (3229192, 3229252), (3229779, 3229911), (3231796, 3231908), (3232239, 3232297), (3232239, 3232300)] 2021-10-25 09:33:07.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6720942, 6720996), (6721131, 6721187), (6721454, 6721517), (6721596, 6721649), (6722086, 6722141), (6722430, 6723192), (6722430, 6722796), (6722439, 6722796), (6722439, 6723192)] 2021-10-25 09:33:07.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051975: ['FBtr0302195', 'FBtr0302196'] 2021-10-25 09:33:07.760 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7781851, 7781911)] 2021-10-25 09:33:07.761 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.761 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.781 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079306': ['FBtr0329893']} 2021-10-25 09:33:07.782 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329893']] 2021-10-25 09:33:07.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259701: ['FBtr0309792', 'FBtr0344866'] 2021-10-25 09:33:07.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(138590, 138668), (139198, 139255), (139385, 139441), (139687, 139740), (139954, 140113)] 2021-10-25 09:33:07.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031947: ['FBtr0079488'] 2021-10-25 09:33:07.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031947 has a single transcript. 2021-10-25 09:33:07.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031948: ['FBtr0079496', 'FBtr0343405', 'FBtr0343406'] 2021-10-25 09:33:07.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2037473, 2037528), (2037816, 2037873), (2038108, 2038180)] 2021-10-25 09:33:07.838 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2037873, 2038224, 'FBtr0309792_exon_1') contains intron (2038108, 2038180) 2021-10-25 09:33:07.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309792_exon_1'] 2021-10-25 09:33:07.839 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266099: ['FBtr0343550', 'FBtr0343551'] 2021-10-25 09:33:07.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051976: ['FBtr0346127', 'FBtr0302194'] 2021-10-25 09:33:07.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035425: ['FBtr0073093', 'FBtr0073094'] 2021-10-25 09:33:07.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16391352, 16391476), (16391617, 16396942), (16398040, 16398632), (16398825, 16398911), (16399092, 16399161), (16399285, 16399466), (16399525, 16399582)] 2021-10-25 09:33:07.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259702: ['FBtr0299955'] 2021-10-25 09:33:07.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259702 has a single transcript. 2021-10-25 09:33:07.900 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7786424, 7786700), (7786424, 7786989), (7787031, 7787094), (7787304, 7787371), (7787552, 7787612), (7787767, 7787833), (7788090, 7788150), (7788337, 7788398), (7788467, 7790021)] 2021-10-25 09:33:07.901 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7786159, 7787031, 'FBtr0079496_exon_8') contains intron (7786424, 7786700) 2021-10-25 09:33:07.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079496_exon_8'] 2021-10-25 09:33:07.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259703: ['FBtr0299956'] 2021-10-25 09:33:07.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259703 has a single transcript. 2021-10-25 09:33:07.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(138590, 138668), (139198, 139255), (139385, 139441), (139687, 139740), (139954, 140113)] 2021-10-25 09:33:07.914 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259704: ['FBtr0299957'] 2021-10-25 09:33:07.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259704 has a single transcript. 2021-10-25 09:33:07.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3237664, 3237741), (3238072, 3238611), (3238982, 3239421), (3238982, 3239241)] 2021-10-25 09:33:07.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14173922, 14174099), (14174269, 14174461), (14174572, 14176405), (14176542, 14176611), (14176691, 14177174), (14176691, 14177839), (14176691, 14177860), (14176691, 14177884), (14177477, 14177824), (14177477, 14177839), (14177477, 14177860), (14177477, 14177884), (14178021, 14178097), (14178200, 14178271), (14178203, 14178271), (14178596, 14178664), (14178829, 14178893), (14179041, 14179108), (14179041, 14179111), (14179254, 14179312), (14179931, 14181210), (14179931, 14180421), (14180819, 14181210)] 2021-10-25 09:33:07.924 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0087526_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259705: ['FBtr0299958'] 2021-10-25 09:33:07.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259705 has a single transcript. 2021-10-25 09:33:07.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0087527_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174269, 'FBtr0087528_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.926 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14174099, 14174572, 'FBtr0087529_exon_2') contains intron (14174269, 14174461) 2021-10-25 09:33:07.927 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0339960_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.928 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0339961_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.929 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0339962_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.929 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0112795_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.930 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0290034_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.931 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0290035_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259707: ['FBtr0299960'] 2021-10-25 09:33:07.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259707 has a single transcript. 2021-10-25 09:33:07.932 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14173692, 14174572, 'FBtr0346946_exon_1') contains intron (14173922, 14174099) 2021-10-25 09:33:07.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087526_exon_1', 'FBtr0087527_exon_1', 'FBtr0087528_exon_1', 'FBtr0087529_exon_2', 'FBtr0339960_exon_1', 'FBtr0339961_exon_1', 'FBtr0339962_exon_1', 'FBtr0112795_exon_1', 'FBtr0290034_exon_1', 'FBtr0290035_exon_1', 'FBtr0346946_exon_1'] 2021-10-25 09:33:07.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259708: ['FBtr0299961', 'FBtr0345939'] 2021-10-25 09:33:07.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266100: ['FBtr0343552', 'FBtr0343553', 'FBtr0343554'] 2021-10-25 09:33:07.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025781: ['FBtr0084377'] 2021-10-25 09:33:07.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025781 has a single transcript. 2021-10-25 09:33:07.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025790: ['FBtr0089624', 'FBtr0089625', 'FBtr0089626', 'FBtr0089627', 'FBtr0301643', 'FBtr0301644'] 2021-10-25 09:33:07.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035426: ['FBtr0073092', 'FBtr0308063'] 2021-10-25 09:33:07.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21665130, 21665183)] 2021-10-25 09:33:07.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:07.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:07.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051988: ['FBtr0081490', 'FBtr0343873'] 2021-10-25 09:33:08.020 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11852603, 11854247), (11854876, 11936972), (11854876, 11862283), (11938507, 11938699)] 2021-10-25 09:33:08.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031950: ['FBtr0079493', 'FBtr0343403'] 2021-10-25 09:33:08.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.034 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21202272, 21202433)] 2021-10-25 09:33:08.035 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.035 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.039 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0343553': ['FBtr0343554']} 2021-10-25 09:33:08.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20757249, 20791744), (20757249, 20772795), (20772882, 20791744), (20780827, 20791744), (20783580, 20791744), (20790332, 20791744), (20791863, 20791936), (20792249, 20792313), (20792555, 20795138), (20792555, 20793715), (20793851, 20797143), (20795274, 20797143), (20797277, 20797344), (20797473, 20797535), (20797676, 20797746), (20797853, 20798290), (20797853, 20798314), (20798409, 20800016), (20798409, 20802289), (20798409, 20805946), (20800300, 20802289), (20802551, 20804674), (20802551, 20805946)] 2021-10-25 09:33:08.039 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0343554']] 2021-10-25 09:33:08.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3244079, 3244146), (3244079, 3244165)] 2021-10-25 09:33:08.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.062 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7797326, 7797396), (7797732, 7798162), (7798623, 7799308)] 2021-10-25 09:33:08.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259709: ['FBtr0299962', 'FBtr0345940'] 2021-10-25 09:33:08.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266101: ['FBtr0343555', 'FBtr0343556', 'FBtr0343557', 'FBtr0343558', 'FBtr0343559', 'FBtr0343560'] 2021-10-25 09:33:08.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051989: ['FBtr0079097', 'FBtr0301318'] 2021-10-25 09:33:08.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035427: ['FBtr0073050', 'FBtr0331457', 'FBtr0331458'] 2021-10-25 09:33:08.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21665130, 21665183)] 2021-10-25 09:33:08.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031951: ['FBtr0079489', 'FBtr0301329', 'FBtr0343415'] 2021-10-25 09:33:08.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23859617, 23859689), (23859827, 23860356), (23859827, 23859886), (23860515, 23860570), (23860775, 23860832), (23861143, 23861205), (23861457, 23862489), (23861457, 23862260), (23861460, 23862489), (23861460, 23862260)] 2021-10-25 09:33:08.139 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23861205, 23862593, 'FBtr0089625_exon_1') contains intron (23861457, 23862489) 2021-10-25 09:33:08.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089625_exon_1'] 2021-10-25 09:33:08.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5526654, 5532364), (5532648, 5532703), (5533522, 5533578), (5533742, 5533802), (5534986, 5535049), (5535303, 5535364)] 2021-10-25 09:33:08.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3257945, 3266402), (3257945, 3258417), (3258655, 3266402), (3266714, 3267120), (3267287, 3267424), (3267547, 3267608)] 2021-10-25 09:33:08.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259710: ['FBtr0302526'] 2021-10-25 09:33:08.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259710 has a single transcript. 2021-10-25 09:33:08.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259711: ['FBtr0299964'] 2021-10-25 09:33:08.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259711 has a single transcript. 2021-10-25 09:33:08.176 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7800252, 7800345), (7800647, 7800720)] 2021-10-25 09:33:08.177 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7800146, 7800647, 'FBtr0343415_exon_1') contains intron (7800252, 7800345) 2021-10-25 09:33:08.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343415_exon_1'] 2021-10-25 09:33:08.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259712: ['FBtr0299965', 'FBtr0331633'] 2021-10-25 09:33:08.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051992: ['FBtr0089097', 'FBtr0089096', 'FBtr0089101', 'FBtr0089100', 'FBtr0310542', 'FBtr0310543'] 2021-10-25 09:33:08.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9925282, 9926567), (9926768, 9926838), (9927006, 9927065), (9927404, 9927469), (9928494, 9928857), (9929145, 9929804), (9929914, 9930086)] 2021-10-25 09:33:08.224 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9929804, 9930378, 'FBtr0299965_exon_7') contains intron (9929914, 9930086) 2021-10-25 09:33:08.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299965_exon_7'] 2021-10-25 09:33:08.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9461296, 9461887), (9461559, 9461887), (9462826, 9463363), (9464706, 9470267), (9470437, 9470559), (9470633, 9471134), (9470633, 9473127), (9473681, 9473954), (9474124, 9474187), (9474267, 9474328)] 2021-10-25 09:33:08.262 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9461887, 9464706, 'FBtr0343555_exon_2') contains intron (9462826, 9463363) 2021-10-25 09:33:08.262 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9461887, 9464706, 'FBtr0343556_exon_2') contains intron (9462826, 9463363) 2021-10-25 09:33:08.263 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9461887, 9464706, 'FBtr0343559_exon_2') contains intron (9462826, 9463363) 2021-10-25 09:33:08.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343555_exon_2', 'FBtr0343556_exon_2', 'FBtr0343559_exon_2'] 2021-10-25 09:33:08.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035428: ['FBtr0073051'] 2021-10-25 09:33:08.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035428 has a single transcript. 2021-10-25 09:33:08.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031952: ['FBtr0079492', 'FBtr0301330', 'FBtr0301331', 'FBtr0343423', 'FBtr0343424'] 2021-10-25 09:33:08.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035429: ['FBtr0073052', 'FBtr0308311', 'FBtr0308312', 'FBtr0308313'] 2021-10-25 09:33:08.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259713: ['FBtr0331634'] 2021-10-25 09:33:08.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259713 has a single transcript. 2021-10-25 09:33:08.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259714: ['FBtr0299967'] 2021-10-25 09:33:08.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259714 has a single transcript. 2021-10-25 09:33:08.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259715: ['FBtr0299968'] 2021-10-25 09:33:08.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259715 has a single transcript. 2021-10-25 09:33:08.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259716: ['FBtr0299969'] 2021-10-25 09:33:08.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259716 has a single transcript. 2021-10-25 09:33:08.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259717: ['FBtr0299970'] 2021-10-25 09:33:08.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259717 has a single transcript. 2021-10-25 09:33:08.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259718: ['FBtr0340023', 'FBtr0299971'] 2021-10-25 09:33:08.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(651030, 652304), (652578, 652645), (652584, 652645), (652833, 652900), (652842, 652900), (653051, 653869), (654048, 654504), (654798, 655060), (655435, 656215), (657684, 657901), (658508, 660428), (658508, 659877), (658508, 659559), (658508, 661045), (658508, 659920), (661980, 662764)] 2021-10-25 09:33:08.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.380 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3280718, 3286301), (3286433, 3286951), (3287102, 3287200), (3287637, 3287708), (3288170, 3288982), (3288185, 3288982), (3289188, 3290332), (3289188, 3290302), (3289188, 3289884), (3290074, 3290302)] 2021-10-25 09:33:08.380 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16291718, 16291773)] 2021-10-25 09:33:08.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.383 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7803043, 7804570), (7803576, 7804570), (7803743, 7804570), (7804915, 7805059), (7804918, 7805059), (7805788, 7805852), (7806523, 7806656), (7806922, 7806989), (7807092, 7810161)] 2021-10-25 09:33:08.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025800: ['FBtr0071192', 'FBtr0340159'] 2021-10-25 09:33:08.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000299: ['FBtr0079001', 'FBtr0079002', 'FBtr0079003'] 2021-10-25 09:33:08.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259720: ['FBtr0299975', 'FBtr0344455'] 2021-10-25 09:33:08.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8140917, 8141635)] 2021-10-25 09:33:08.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19264096, 19264326), (19264622, 19264680), (19265443, 19266593)] 2021-10-25 09:33:08.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5029636, 5030136), (5029746, 5030136), (5029810, 5030136), (5030237, 5030741), (5030790, 5030854), (5031802, 5031877), (5032374, 5032499), (5033950, 5034012), (5034981, 5035063), (5036208, 5036476)] 2021-10-25 09:33:08.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025802: ['FBtr0082529', 'FBtr0082530'] 2021-10-25 09:33:08.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035430: ['FBtr0073053', 'FBtr0308314'] 2021-10-25 09:33:08.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259721: ['FBtr0299976'] 2021-10-25 09:33:08.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259721 has a single transcript. 2021-10-25 09:33:08.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259722: ['FBtr0299977', 'FBtr0299978'] 2021-10-25 09:33:08.600 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11790021, 11790080), (11790163, 11790222), (11790347, 11790427), (11792021, 11792083), (11793654, 11793720), (11794730, 11794790), (11795756, 11795815), (11796136, 11796205), (11796309, 11796380), (11796494, 11796843)] 2021-10-25 09:33:08.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031954: ['FBtr0079526'] 2021-10-25 09:33:08.601 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11793720, 11795756, 'FBtr0082529_exon_5') contains intron (11794730, 11794790) 2021-10-25 09:33:08.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031954 has a single transcript. 2021-10-25 09:33:08.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082529_exon_5'] 2021-10-25 09:33:08.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031955: ['FBtr0079564', 'FBtr0343421'] 2021-10-25 09:33:08.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3291749, 3295997), (3295077, 3295997), (3296315, 3296374)] 2021-10-25 09:33:08.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051997: ['FBtr0089154', 'FBtr0345283'] 2021-10-25 09:33:08.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.615 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(254921, 254983)] 2021-10-25 09:33:08.616 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (254875, 255524, 'FBtr0299977_exon_1') contains intron (254921, 254983) 2021-10-25 09:33:08.616 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299977_exon_1'] 2021-10-25 09:33:08.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266102: ['FBtr0343565'] 2021-10-25 09:33:08.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266102 has a single transcript. 2021-10-25 09:33:08.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000303: ['FBtr0089368', 'FBtr0089367'] 2021-10-25 09:33:08.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266111: ['FBtr0087904'] 2021-10-25 09:33:08.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266111 has a single transcript. 2021-10-25 09:33:08.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266114: ['FBtr0343601'] 2021-10-25 09:33:08.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266114 has a single transcript. 2021-10-25 09:33:08.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266115: ['FBtr0343603'] 2021-10-25 09:33:08.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266115 has a single transcript. 2021-10-25 09:33:08.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266116: ['FBtr0343630'] 2021-10-25 09:33:08.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266116 has a single transcript. 2021-10-25 09:33:08.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7847664, 7847804), (7848849, 7848998), (7849589, 7850305), (7850539, 7851406), (7851740, 7852956), (7853366, 7855023)] 2021-10-25 09:33:08.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266117: ['FBtr0343631'] 2021-10-25 09:33:08.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266117 has a single transcript. 2021-10-25 09:33:08.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266124: ['FBtr0076462'] 2021-10-25 09:33:08.663 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266124 has a single transcript. 2021-10-25 09:33:08.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(154965, 155026), (155147, 155764)] 2021-10-25 09:33:08.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266129: ['FBtr0072457', 'FBtr0072458', 'FBtr0100126', 'FBtr0330231', 'FBtr0343605'] 2021-10-25 09:33:08.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259725: ['FBtr0299990', 'FBtr0299991'] 2021-10-25 09:33:08.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18706106, 18723987), (18724067, 18725132), (18725324, 18728782), (18729544, 18729608), (18730016, 18730109), (18730235, 18730322), (18730256, 18730322), (18730523, 18730729)] 2021-10-25 09:33:08.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025807: ['FBtr0075080', 'FBtr0112917'] 2021-10-25 09:33:08.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035431: ['FBtr0073086', 'FBtr0073087', 'FBtr0073088', 'FBtr0073089', 'FBtr0073090'] 2021-10-25 09:33:08.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031957: ['FBtr0079563'] 2021-10-25 09:33:08.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031957 has a single transcript. 2021-10-25 09:33:08.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031959: ['FBtr0079561'] 2021-10-25 09:33:08.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031959 has a single transcript. 2021-10-25 09:33:08.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031961: ['FBtr0079559', 'FBtr0343419'] 2021-10-25 09:33:08.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21669480, 21669536), (21669693, 21669754)] 2021-10-25 09:33:08.737 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21669536, 21669916, 'FBtr0299991_exon_1') contains intron (21669693, 21669754) 2021-10-25 09:33:08.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299991_exon_1'] 2021-10-25 09:33:08.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051998: ['FBtr0089145', 'FBtr0308249'] 2021-10-25 09:33:08.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18870352, 18870647), (18870780, 18870997), (18871853, 18871961), (18872113, 18872167), (18872394, 18872450)] 2021-10-25 09:33:08.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000307: ['FBtr0080838', 'FBtr0080839', 'FBtr0321313'] 2021-10-25 09:33:08.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7883828, 7883910), (7884581, 7884654), (7884788, 7886307), (7886470, 7886534), (7886697, 7886927)] 2021-10-25 09:33:08.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(201383, 201440), (201658, 203979), (204574, 204639), (204592, 204639), (204792, 205740), (204792, 205658)] 2021-10-25 09:33:08.786 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259726: ['FBtr0299992', 'FBtr0299993'] 2021-10-25 09:33:08.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025808: ['FBtr0082974'] 2021-10-25 09:33:08.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025808 has a single transcript. 2021-10-25 09:33:08.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25087734, 25091591), (25091723, 25094281), (25096499, 25098094), (25096499, 25099039), (25096499, 25098785), (25096499, 25139063), (25139388, 25139440)] 2021-10-25 09:33:08.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025809: ['FBtr0074190', 'FBtr0074191'] 2021-10-25 09:33:08.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16343304, 16344425), (16349472, 16351926), (16349472, 16349986)] 2021-10-25 09:33:08.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3300047, 3300722), (3300883, 3303047), (3300883, 3300988), (3300883, 3300962), (3300883, 3302331)] 2021-10-25 09:33:08.839 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3300722, 3300968, 'FBtr0073090_exon_1') contains intron (3300883, 3300962) 2021-10-25 09:33:08.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073090_exon_1'] 2021-10-25 09:33:08.839 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21669480, 21669536), (21669693, 21669754)] 2021-10-25 09:33:08.844 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21669536, 21669916, 'FBtr0299993_exon_1') contains intron (21669693, 21669754) 2021-10-25 09:33:08.845 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299993_exon_1'] 2021-10-25 09:33:08.845 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15784596, 15784664), (15785129, 15785201)] 2021-10-25 09:33:08.851 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15784664, 15785583, 'FBtr0074190_exon_1') contains intron (15785129, 15785201) 2021-10-25 09:33:08.851 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074190_exon_1'] 2021-10-25 09:33:08.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031968: ['FBtr0079531', 'FBtr0300184', 'FBtr0300185', 'FBtr0306336'] 2021-10-25 09:33:08.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051999: ['FBtr0089144', 'FBtr0344870'] 2021-10-25 09:33:08.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038827: ['FBtr0083995'] 2021-10-25 09:33:08.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038827 has a single transcript. 2021-10-25 09:33:08.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038828: ['FBtr0083994', 'FBtr0334723'] 2021-10-25 09:33:08.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(215267, 215329), (215560, 217405), (217494, 218247), (218380, 218445), (218890, 219890), (220028, 220143), (220437, 222540), (222598, 222653), (222736, 222790), (223012, 223556), (223886, 223944), (224439, 225761), (226550, 227675)] 2021-10-25 09:33:08.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259727: ['FBtr0299989'] 2021-10-25 09:33:08.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259727 has a single transcript. 2021-10-25 09:33:08.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259728: ['FBtr0299994'] 2021-10-25 09:33:08.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259728 has a single transcript. 2021-10-25 09:33:08.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025814: ['FBtr0077242', 'FBtr0077243', 'FBtr0345919'] 2021-10-25 09:33:08.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000308: ['FBtr0079233', 'FBtr0079234', 'FBtr0079235', 'FBtr0079236', 'FBtr0309212', 'FBtr0309213'] 2021-10-25 09:33:08.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259729: ['FBtr0299995'] 2021-10-25 09:33:08.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259729 has a single transcript. 2021-10-25 09:33:08.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20817214, 20817308), (20817427, 20817494), (20817585, 20817639), (20817800, 20818708)] 2021-10-25 09:33:08.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259730: ['FBtr0299997'] 2021-10-25 09:33:08.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259730 has a single transcript. 2021-10-25 09:33:08.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259731: ['FBtr0299998'] 2021-10-25 09:33:08.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259731 has a single transcript. 2021-10-25 09:33:08.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259732: ['FBtr0299999'] 2021-10-25 09:33:08.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259732 has a single transcript. 2021-10-25 09:33:08.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259733: ['FBtr0299996'] 2021-10-25 09:33:08.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259733 has a single transcript. 2021-10-25 09:33:08.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7984238, 7984540), (7984810, 7985552), (7985433, 7985552), (7985441, 7985552), (7985493, 7985552), (7985768, 7985833), (7986075, 7986138), (7986084, 7986138)] 2021-10-25 09:33:08.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:08.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:08.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259734: ['FBtr0343357', 'FBtr0300000', 'FBtr0300001', 'FBtr0302905', 'FBtr0302906', 'FBtr0302907'] 2021-10-25 09:33:08.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052000: ['FBtr0089445', 'FBtr0089450', 'FBtr0089451', 'FBtr0089449', 'FBtr0089447', 'FBtr0089448', 'FBtr0089446', 'FBtr0113417', 'FBtr0333161'] 2021-10-25 09:33:08.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266136: ['FBtr0302280', 'FBtr0302281', 'FBtr0302282', 'FBtr0333879'] 2021-10-25 09:33:09.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21042647, 21043679), (21043301, 21043679)] 2021-10-25 09:33:09.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038829: ['FBtr0083993', 'FBtr0110823'] 2021-10-25 09:33:09.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035432: ['FBtr0073054', 'FBtr0073055', 'FBtr0073056', 'FBtr0073057', 'FBtr0073058', 'FBtr0330103', 'FBtr0330104'] 2021-10-25 09:33:09.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20819494, 20820649), (20820443, 20820649), (20820798, 20821145), (20821366, 20821427), (20821541, 20821600)] 2021-10-25 09:33:09.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.084 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5973674, 5976610), (5976782, 5979411), (5979704, 5980952), (5979704, 5980846), (5979704, 5979939), (5979704, 5980208), (5979704, 5980950), (5979704, 5979959)] 2021-10-25 09:33:09.085 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.085 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19753590, 19753677), (19753842, 19753936), (19754165, 19754230), (19754537, 19754606), (19754772, 19754889), (19755222, 19755283), (19755574, 19755694), (19755855, 19755931), (19756103, 19756172), (19756395, 19756467), (19756622, 19756696), (19756909, 19757535), (19757601, 19757724), (19757922, 19758062), (19758288, 19780039), (19780279, 19789963), (19790254, 19793453), (19790254, 19790883), (19790254, 19791447), (19790254, 19793427), (19791610, 19793453)] 2021-10-25 09:33:09.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038830: ['FBtr0083992'] 2021-10-25 09:33:09.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038830 has a single transcript. 2021-10-25 09:33:09.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038832: ['FBtr0083967'] 2021-10-25 09:33:09.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038832 has a single transcript. 2021-10-25 09:33:09.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025815: ['FBtr0070952'] 2021-10-25 09:33:09.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025815 has a single transcript. 2021-10-25 09:33:09.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038833: ['FBtr0083968'] 2021-10-25 09:33:09.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038833 has a single transcript. 2021-10-25 09:33:09.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025820: ['FBtr0072788', 'FBtr0332876', 'FBtr0332877'] 2021-10-25 09:33:09.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038834: ['FBtr0083969', 'FBtr0083970', 'FBtr0346148'] 2021-10-25 09:33:09.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031969: ['FBtr0114550', 'FBtr0300183', 'FBtr0344860', 'FBtr0344861', 'FBtr0331673', 'FBtr0331674'] 2021-10-25 09:33:09.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9030896, 9040037), (9030896, 9051036), (9039860, 9040037), (9040316, 9049249), (9040316, 9051036), (9042791, 9049249), (9042830, 9049249), (9050935, 9051036), (9051122, 9051184), (9051410, 9051467), (9052217, 9052277), (9052388, 9052449)] 2021-10-25 09:33:09.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.190 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1802743, 1802803), (1802753, 1802803)] 2021-10-25 09:33:09.191 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1802007, 1802856, 'FBtr0072788_exon_1') contains intron (1802743, 1802803) 2021-10-25 09:33:09.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072788_exon_1'] 2021-10-25 09:33:09.192 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20850627, 20850854), (20850943, 20851030)] 2021-10-25 09:33:09.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.199 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(132287, 133185), (133231, 133587), (133235, 133587), (133713, 133794), (133713, 134670), (133924, 134824), (134964, 136878), (136371, 136690), (136777, 136878), (137167, 137222), (137332, 137390), (137752, 137806), (138310, 138373), (138574, 140269), (138574, 139821), (142127, 142199)] 2021-10-25 09:33:09.208 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (136271, 136777, 'FBtr0089450_exon_1') contains intron (136371, 136690) 2021-10-25 09:33:09.208 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (136271, 136777, 'FBtr0089449_exon_1') contains intron (136371, 136690) 2021-10-25 09:33:09.210 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (133587, 134964, 'FBtr0089447_exon_3') contains intron (133713, 133794) 2021-10-25 09:33:09.210 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (133587, 134964, 'FBtr0113417_exon_3') contains intron (133713, 133794) 2021-10-25 09:33:09.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089450_exon_1', 'FBtr0089449_exon_1', 'FBtr0089447_exon_3', 'FBtr0113417_exon_3'] 2021-10-25 09:33:09.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3303852, 3310519), (3303852, 3304601), (3304021, 3304601), (3304273, 3304601), (3304665, 3310519), (3308174, 3310519), (3309927, 3310519), (3310706, 3310771), (3310896, 3311729), (3311827, 3311885), (3312402, 3312514), (3312749, 3312814)] 2021-10-25 09:33:09.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266137: ['FBtr0085467', 'FBtr0085468', 'FBtr0330293'] 2021-10-25 09:33:09.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7988327, 7988392), (7989177, 7989242), (7989551, 7991357), (7991259, 7991357), (7991619, 7993840), (7991619, 7993351), (7991619, 7994109), (7991619, 7993134)] 2021-10-25 09:33:09.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025821: ['FBtr0082427'] 2021-10-25 09:33:09.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025821 has a single transcript. 2021-10-25 09:33:09.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025825: ['FBtr0078767'] 2021-10-25 09:33:09.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025825 has a single transcript. 2021-10-25 09:33:09.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025827: ['FBtr0087043'] 2021-10-25 09:33:09.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025827 has a single transcript. 2021-10-25 09:33:09.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025830: ['FBtr0087036'] 2021-10-25 09:33:09.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025830 has a single transcript. 2021-10-25 09:33:09.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025832: ['FBtr0087075'] 2021-10-25 09:33:09.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025832 has a single transcript. 2021-10-25 09:33:09.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038837: ['FBtr0083987'] 2021-10-25 09:33:09.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29632860, 29638931), (29632860, 29640228), (29639105, 29640228), (29640310, 29640625), (29642263, 29658873), (29659393, 29659791)] 2021-10-25 09:33:09.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038837 has a single transcript. 2021-10-25 09:33:09.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000316: ['FBtr0070064', 'FBtr0070065'] 2021-10-25 09:33:09.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025833: ['FBtr0087071'] 2021-10-25 09:33:09.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025833 has a single transcript. 2021-10-25 09:33:09.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038838: ['FBtr0083973'] 2021-10-25 09:33:09.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038838 has a single transcript. 2021-10-25 09:33:09.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025835: ['FBtr0340051', 'FBtr0300673'] 2021-10-25 09:33:09.331 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085467': ['FBtr0330293']} 2021-10-25 09:33:09.331 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330293']] 2021-10-25 09:33:09.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038839: ['FBtr0083986', 'FBtr0347575'] 2021-10-25 09:33:09.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(255824, 255880), (256641, 256761), (256940, 256998), (257427, 257479), (257642, 257981), (258080, 258141)] 2021-10-25 09:33:09.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.374 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(143487, 144334), (144504, 144560), (144755, 144817), (145074, 145134), (145233, 145299), (145379, 145455), (145853, 145913), (145856, 145913), (146122, 146188), (146367, 146434), (147785, 148333)] 2021-10-25 09:33:09.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20895681, 20895744)] 2021-10-25 09:33:09.378 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20894451, 20897320, 'FBtr0083986_exon_1') contains intron (20895681, 20895744) 2021-10-25 09:33:09.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083986_exon_1'] 2021-10-25 09:33:09.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266138: ['FBtr0343693'] 2021-10-25 09:33:09.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266138 has a single transcript. 2021-10-25 09:33:09.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266139: ['FBtr0343654', 'FBtr0343655'] 2021-10-25 09:33:09.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259735: ['FBtr0300003', 'FBtr0300004', 'FBtr0300005', 'FBtr0335497'] 2021-10-25 09:33:09.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038840: ['FBtr0083978', 'FBtr0335015', 'FBtr0335016'] 2021-10-25 09:33:09.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000317: ['FBtr0080723', 'FBtr0080724', 'FBtr0343686', 'FBtr0343687'] 2021-10-25 09:33:09.445 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10209397, 10209484)] 2021-10-25 09:33:09.446 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.446 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025836: ['FBtr0340053', 'FBtr0340054', 'FBtr0340055', 'FBtr0112919', 'FBtr0112920', 'FBtr0302200'] 2021-10-25 09:33:09.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035434: ['FBtr0073062'] 2021-10-25 09:33:09.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035434 has a single transcript. 2021-10-25 09:33:09.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035435: ['FBtr0300753', 'FBtr0472668'] 2021-10-25 09:33:09.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266140: ['FBtr0343658', 'FBtr0343659'] 2021-10-25 09:33:09.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031970: ['FBtr0079551', 'FBtr0305574', 'FBtr0344063'] 2021-10-25 09:33:09.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16545438, 16557878), (16559944, 16652742), (16602085, 16603823), (16604396, 16621835), (16622841, 16652742), (16622841, 16634725), (16634776, 16652742), (16652912, 16657498), (16657429, 16657498), (16657952, 16658023)] 2021-10-25 09:33:09.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20902224, 20902424), (20902588, 20902687), (20903294, 20903476), (20903634, 20903973), (20904195, 20904278), (20904485, 20905927), (20906012, 20906154), (20906431, 20906495), (20906697, 20906751), (20906974, 20907037), (20907153, 20907211), (20907153, 20907487), (20907361, 20907932), (20907634, 20907932)] 2021-10-25 09:33:09.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20907037, 20908263, 'FBtr0083978_exon_11') contains intron (20907153, 20907211) 2021-10-25 09:33:09.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083978_exon_11'] 2021-10-25 09:33:09.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15045620, 15045689), (15045810, 15045878), (15046025, 15046087), (15046653, 15046712), (15047499, 15047560), (15049011, 15049067), (15051462, 15051526), (15051727, 15051793), (15052143, 15052473), (15052734, 15053413), (15053517, 15057667), (15053522, 15057667), (15053522, 15057504)] 2021-10-25 09:33:09.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.530 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3318589, 3318691)] 2021-10-25 09:33:09.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.547 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0300753': ['FBtr0472668']} 2021-10-25 09:33:09.548 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0472668']] 2021-10-25 09:33:09.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035436: ['FBtr0073063', 'FBtr0073064'] 2021-10-25 09:33:09.558 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13747109, 13753395), (13747109, 13755906), (13753636, 13753706)] 2021-10-25 09:33:09.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.560 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052006: ['FBtr0089170'] 2021-10-25 09:33:09.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052006 has a single transcript. 2021-10-25 09:33:09.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7995346, 7995411), (7995691, 7995755), (7996053, 7996113), (7996810, 7997360), (7997761, 7998066)] 2021-10-25 09:33:09.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052009: ['FBtr0089180', 'FBtr0333682'] 2021-10-25 09:33:09.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3319905, 3320514), (3320356, 3320514)] 2021-10-25 09:33:09.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266141: ['FBtr0343660'] 2021-10-25 09:33:09.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266141 has a single transcript. 2021-10-25 09:33:09.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(127595, 128920), (129417, 132806), (131467, 132806), (131897, 132806), (133384, 133502), (134124, 134268), (134127, 134268), (134127, 134265), (134564, 134633), (134760, 136634), (134760, 136054), (136075, 136634), (136733, 137255), (138260, 138321), (138705, 138769), (138930, 139066), (139206, 139274), (139524, 139584), (139780, 139850)] 2021-10-25 09:33:09.624 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (139584, 140340, 'FBtr0340053_exon_14') contains intron (139780, 139850) 2021-10-25 09:33:09.625 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (139584, 140340, 'FBtr0340054_exon_14') contains intron (139780, 139850) 2021-10-25 09:33:09.626 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (139584, 140340, 'FBtr0112919_exon_14') contains intron (139780, 139850) 2021-10-25 09:33:09.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340053_exon_14', 'FBtr0340054_exon_14', 'FBtr0112919_exon_14'] 2021-10-25 09:33:09.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266142: ['FBtr0343670'] 2021-10-25 09:33:09.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266142 has a single transcript. 2021-10-25 09:33:09.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038842: ['FBtr0083979', 'FBtr0113257', 'FBtr0334919'] 2021-10-25 09:33:09.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27205, 27702), (27637, 27702), (27885, 28906), (29490, 29548)] 2021-10-25 09:33:09.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266143: ['FBtr0343691'] 2021-10-25 09:33:09.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266143 has a single transcript. 2021-10-25 09:33:09.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266144: ['FBtr0343677'] 2021-10-25 09:33:09.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266144 has a single transcript. 2021-10-25 09:33:09.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035437: ['FBtr0073083', 'FBtr0073084', 'FBtr0332058'] 2021-10-25 09:33:09.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266145: ['FBtr0343679'] 2021-10-25 09:33:09.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266145 has a single transcript. 2021-10-25 09:33:09.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266146: ['FBtr0343705'] 2021-10-25 09:33:09.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266146 has a single transcript. 2021-10-25 09:33:09.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266147: ['FBtr0343702'] 2021-10-25 09:33:09.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266147 has a single transcript. 2021-10-25 09:33:09.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031971: ['FBtr0079532', 'FBtr0343382'] 2021-10-25 09:33:09.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052010: ['FBtr0089181', 'FBtr0333683'] 2021-10-25 09:33:09.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266148: ['FBtr0343701'] 2021-10-25 09:33:09.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266148 has a single transcript. 2021-10-25 09:33:09.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259736: ['FBtr0300006', 'FBtr0300008', 'FBtr0336711'] 2021-10-25 09:33:09.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266149: ['FBtr0343697'] 2021-10-25 09:33:09.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266149 has a single transcript. 2021-10-25 09:33:09.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000318: ['FBtr0079095', 'FBtr0329967', 'FBtr0329968'] 2021-10-25 09:33:09.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266150: ['FBtr0343698'] 2021-10-25 09:33:09.694 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266150 has a single transcript. 2021-10-25 09:33:09.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266151: ['FBtr0343711'] 2021-10-25 09:33:09.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266151 has a single transcript. 2021-10-25 09:33:09.709 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20914408, 20925921), (20926102, 20926164), (20926252, 20926344), (20926690, 20926756), (20926977, 20927187), (20927466, 20928679), (20928760, 20928837)] 2021-10-25 09:33:09.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266152: ['FBtr0343709'] 2021-10-25 09:33:09.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266152 has a single transcript. 2021-10-25 09:33:09.710 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.710 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266153: ['FBtr0343712'] 2021-10-25 09:33:09.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266153 has a single transcript. 2021-10-25 09:33:09.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7999167, 7999248)] 2021-10-25 09:33:09.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266154: ['FBtr0343714'] 2021-10-25 09:33:09.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266154 has a single transcript. 2021-10-25 09:33:09.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12825, 13322), (13257, 13322), (13505, 20969), (21553, 21611), (21947, 22001)] 2021-10-25 09:33:09.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266155: ['FBtr0343731'] 2021-10-25 09:33:09.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266155 has a single transcript. 2021-10-25 09:33:09.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3322842, 3322909), (3324636, 3324699), (3325601, 3328698), (3326036, 3328698)] 2021-10-25 09:33:09.732 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266156: ['FBtr0343732'] 2021-10-25 09:33:09.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266156 has a single transcript. 2021-10-25 09:33:09.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266157: ['FBtr0343733'] 2021-10-25 09:33:09.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266157 has a single transcript. 2021-10-25 09:33:09.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266158: ['FBtr0343736'] 2021-10-25 09:33:09.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266158 has a single transcript. 2021-10-25 09:33:09.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22120462, 22120846), (22120462, 22123944), (22120971, 22123944), (22126466, 22129246), (22129398, 22129462), (22129597, 22129774), (22130032, 22130107), (22130447, 22130505), (22130592, 22130646), (22130797, 22130865), (22131175, 22131242), (22131342, 22132654), (22131342, 22132100), (22132244, 22132654)] 2021-10-25 09:33:09.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266159: ['FBtr0343715'] 2021-10-25 09:33:09.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266159 has a single transcript. 2021-10-25 09:33:09.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266160: ['FBtr0343720'] 2021-10-25 09:33:09.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266160 has a single transcript. 2021-10-25 09:33:09.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266161: ['FBtr0343723'] 2021-10-25 09:33:09.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266161 has a single transcript. 2021-10-25 09:33:09.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5520235, 5520301), (5520235, 5520286), (5520545, 5520618), (5520700, 5521135)] 2021-10-25 09:33:09.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266162: ['FBtr0343724'] 2021-10-25 09:33:09.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266162 has a single transcript. 2021-10-25 09:33:09.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031972: ['FBtr0079550', 'FBtr0343384'] 2021-10-25 09:33:09.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266163: ['FBtr0343713'] 2021-10-25 09:33:09.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266163 has a single transcript. 2021-10-25 09:33:09.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266164: ['FBtr0343730'] 2021-10-25 09:33:09.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266164 has a single transcript. 2021-10-25 09:33:09.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266165: ['FBtr0343729'] 2021-10-25 09:33:09.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266165 has a single transcript. 2021-10-25 09:33:09.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052011: ['FBtr0089182', 'FBtr0333684'] 2021-10-25 09:33:09.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266166: ['FBtr0343746'] 2021-10-25 09:33:09.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266166 has a single transcript. 2021-10-25 09:33:09.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266167: ['FBtr0343745'] 2021-10-25 09:33:09.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266167 has a single transcript. 2021-10-25 09:33:09.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038845: ['FBtr0084048'] 2021-10-25 09:33:09.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038845 has a single transcript. 2021-10-25 09:33:09.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266168: ['FBtr0343743'] 2021-10-25 09:33:09.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266168 has a single transcript. 2021-10-25 09:33:09.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7999714, 7999776), (8000032, 8000107), (8000236, 8000303), (8000433, 8003283), (8003463, 8003524), (8004034, 8004096)] 2021-10-25 09:33:09.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266169: ['FBtr0343744'] 2021-10-25 09:33:09.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266169 has a single transcript. 2021-10-25 09:33:09.823 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7999669, 8000032, 'FBtr0079550_exon_6') contains intron (7999714, 7999776) 2021-10-25 09:33:09.824 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079550_exon_6'] 2021-10-25 09:33:09.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038846: ['FBtr0084001', 'FBtr0309206', 'FBtr0309207', 'FBtr0309208'] 2021-10-25 09:33:09.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266170: ['FBtr0343750', 'FBtr0433519'] 2021-10-25 09:33:09.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6041, 6540), (6475, 6540), (6723, 7744), (8281, 8339), (8675, 8729)] 2021-10-25 09:33:09.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035438: ['FBtr0073066', 'FBtr0073067', 'FBtr0073068'] 2021-10-25 09:33:09.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259737: ['FBtr0300042'] 2021-10-25 09:33:09.872 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259737 has a single transcript. 2021-10-25 09:33:09.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21363884, 21364266), (21364645, 21364713)] 2021-10-25 09:33:09.873 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21362967, 21364645, 'FBtr0433519_exon_2') contains intron (21363884, 21364266) 2021-10-25 09:33:09.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433519_exon_2'] 2021-10-25 09:33:09.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259738: ['FBtr0300043'] 2021-10-25 09:33:09.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259738 has a single transcript. 2021-10-25 09:33:09.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025837: ['FBtr0307094', 'FBtr0307095', 'FBtr0112921'] 2021-10-25 09:33:09.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000319: ['FBtr0074179', 'FBtr0074180', 'FBtr0074181', 'FBtr0074182', 'FBtr0112797', 'FBtr0112798', 'FBtr0339445'] 2021-10-25 09:33:09.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259739: ['FBtr0300044'] 2021-10-25 09:33:09.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259739 has a single transcript. 2021-10-25 09:33:09.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031973: ['FBtr0079549'] 2021-10-25 09:33:09.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031973 has a single transcript. 2021-10-25 09:33:09.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259740: ['FBtr0300045', 'FBtr0344026', 'FBtr0302201', 'FBtr0304667'] 2021-10-25 09:33:09.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031974: ['FBtr0343383', 'FBtr0300761'] 2021-10-25 09:33:09.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052016: ['FBtr0089229', 'FBtr0089233', 'FBtr0310651', 'FBtr0334626'] 2021-10-25 09:33:09.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3326367, 3327342), (3326367, 3327859), (3326712, 3327859), (3327553, 3327859), (3328183, 3328250)] 2021-10-25 09:33:09.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.919 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.925 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21016008, 21016219), (21016041, 21016219), (21016107, 21016267), (21016107, 21016219), (21016427, 21016500)] 2021-10-25 09:33:09.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266171: ['FBtr0343751', 'FBtr0433518'] 2021-10-25 09:33:09.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(125409, 125494), (126259, 126625), (126259, 126354), (126259, 126362), (126496, 126625)] 2021-10-25 09:33:09.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.948 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8008652, 8008717), (8008873, 8008947), (8008891, 8008947), (8009195, 8009255)] 2021-10-25 09:33:09.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:09.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:09.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21364645, 21364713), (21364992, 21365137)] 2021-10-25 09:33:09.987 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21364713, 21365290, 'FBtr0433518_exon_1') contains intron (21364992, 21365137) 2021-10-25 09:33:09.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433518_exon_1'] 2021-10-25 09:33:09.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10849866, 10849931), (10850019, 10851284), (10851488, 10851540), (10851488, 10851548)] 2021-10-25 09:33:10.003 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10851284, 10851788, 'FBtr0300045_exon_2') contains intron (10851488, 10851540) 2021-10-25 09:33:10.004 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10851284, 10851788, 'FBtr0304667_exon_3') contains intron (10851488, 10851540) 2021-10-25 09:33:10.005 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300045_exon_2', 'FBtr0304667_exon_3'] 2021-10-25 09:33:10.005 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(952077, 952137), (952461, 953512), (953806, 954019), (953899, 954019), (954226, 954488), (954863, 954920), (955050, 956544), (957889, 958005), (958123, 958288), (958123, 958313)] 2021-10-25 09:33:10.018 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (958005, 958392, 'FBtr0089233_exon_1') contains intron (958123, 958288) 2021-10-25 09:33:10.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089233_exon_1'] 2021-10-25 09:33:10.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031975: ['FBtr0079533', 'FBtr0079534'] 2021-10-25 09:33:10.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035439: ['FBtr0073069'] 2021-10-25 09:33:10.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035439 has a single transcript. 2021-10-25 09:33:10.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266172: ['FBtr0343748', 'FBtr0343749', 'FBtr0433517'] 2021-10-25 09:33:10.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15828502, 15828562), (15828649, 15828715), (15828882, 15828951), (15833253, 15833491), (15833699, 15834122), (15834371, 15834631), (15834371, 15834820), (15834371, 15835286), (15834371, 15835337), (15834371, 15835443), (15834371, 15835324), (15834371, 15835227), (15834912, 15835324)] 2021-10-25 09:33:10.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035440: ['FBtr0073082'] 2021-10-25 09:33:10.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035440 has a single transcript. 2021-10-25 09:33:10.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025838: ['FBtr0070505'] 2021-10-25 09:33:10.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025838 has a single transcript. 2021-10-25 09:33:10.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035443: ['FBtr0073075'] 2021-10-25 09:33:10.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035443 has a single transcript. 2021-10-25 09:33:10.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035444: ['FBtr0073076', 'FBtr0300749', 'FBtr0346532'] 2021-10-25 09:33:10.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025839: ['FBtr0070386', 'FBtr0343049'] 2021-10-25 09:33:10.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8011883, 8024516), (8013103, 8024516), (8026483, 8026547)] 2021-10-25 09:33:10.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038847: ['FBtr0084003'] 2021-10-25 09:33:10.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038847 has a single transcript. 2021-10-25 09:33:10.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038849: ['FBtr0084043', 'FBtr0346111'] 2021-10-25 09:33:10.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21364375, 21364450), (21364645, 21364713), (21364992, 21365378)] 2021-10-25 09:33:10.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21362967, 21364645, 'FBtr0343749_exon_3') contains intron (21364375, 21364450) 2021-10-25 09:33:10.114 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21362967, 21364645, 'FBtr0433517_exon_2') contains intron (21364375, 21364450) 2021-10-25 09:33:10.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343749_exon_3', 'FBtr0433517_exon_2'] 2021-10-25 09:33:10.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2172705, 2172805)] 2021-10-25 09:33:10.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.120 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3376947, 3376998)] 2021-10-25 09:33:10.139 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3376756, 3377687, 'FBtr0300749_exon_1') contains intron (3376947, 3376998) 2021-10-25 09:33:10.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300749_exon_1'] 2021-10-25 09:33:10.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031976: ['FBtr0301128', 'FBtr0301129', 'FBtr0306002'] 2021-10-25 09:33:10.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21048041, 21048111), (21048598, 21048659)] 2021-10-25 09:33:10.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259741: ['FBtr0344967'] 2021-10-25 09:33:10.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259741 has a single transcript. 2021-10-25 09:33:10.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259742: ['FBtr0299959'] 2021-10-25 09:33:10.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259742 has a single transcript. 2021-10-25 09:33:10.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259745: ['FBtr0300080', 'FBtr0300081', 'FBtr0300082', 'FBtr0300083', 'FBtr0300084'] 2021-10-25 09:33:10.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052017: ['FBtr0300992', 'FBtr0300993', 'FBtr0344977'] 2021-10-25 09:33:10.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025864: ['FBtr0071219', 'FBtr0071220', 'FBtr0343356'] 2021-10-25 09:33:10.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266173: ['FBtr0343752', 'FBtr0433526'] 2021-10-25 09:33:10.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8027241, 8027307), (8027939, 8028013), (8028176, 8028237), (8028176, 8028642), (8028920, 8039735), (8028925, 8039701)] 2021-10-25 09:33:10.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038850: ['FBtr0300816', 'FBtr0345303'] 2021-10-25 09:33:10.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035445: ['FBtr0073077'] 2021-10-25 09:33:10.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035445 has a single transcript. 2021-10-25 09:33:10.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1140000, 1140486), (1140901, 1140959), (1141367, 1143448), (1143565, 1143626), (1143868, 1143984), (1144113, 1146469), (1144113, 1161765), (1144113, 1144965), (1145100, 1145207), (1145321, 1146040)] 2021-10-25 09:33:10.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035449: ['FBtr0073143'] 2021-10-25 09:33:10.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035449 has a single transcript. 2021-10-25 09:33:10.258 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8592591, 8593479), (8593796, 8594092), (8594639, 8594697), (8594848, 8594910), (8595182, 8595247), (8595461, 8595537), (8595858, 8595927), (8597354, 8597411), (8597714, 8598073), (8597714, 8599030), (8598154, 8599030), (8599463, 8599527), (8599989, 8600061), (8600246, 8600309)] 2021-10-25 09:33:10.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035452: ['FBtr0290290', 'FBtr0273204'] 2021-10-25 09:33:10.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21356704, 21356810), (21356968, 21357114), (21357758, 21358004)] 2021-10-25 09:33:10.260 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21356810, 21357758, 'FBtr0343752_exon_2') contains intron (21356968, 21357114) 2021-10-25 09:33:10.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343752_exon_2'] 2021-10-25 09:33:10.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21050286, 21050345), (21050613, 21050681), (21050829, 21050890)] 2021-10-25 09:33:10.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21050345, 21050829, 'FBtr0300816_exon_2') contains intron (21050613, 21050681) 2021-10-25 09:33:10.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300816_exon_2'] 2021-10-25 09:33:10.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7483564, 7483646), (7483799, 7483861), (7485815, 7485884), (7486167, 7488455), (7486167, 7489332), (7489570, 7489645)] 2021-10-25 09:33:10.288 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7489332, 7489823, 'FBtr0300081_exon_1') contains intron (7489570, 7489645) 2021-10-25 09:33:10.288 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7489332, 7489823, 'FBtr0300082_exon_1') contains intron (7489570, 7489645) 2021-10-25 09:33:10.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300081_exon_1', 'FBtr0300082_exon_1'] 2021-10-25 09:33:10.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031977: ['FBtr0079535', 'FBtr0333095'] 2021-10-25 09:33:10.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3612492, 3613074), (3613205, 3613748), (3613882, 3614069), (3613960, 3614069), (3614253, 3614310)] 2021-10-25 09:33:10.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266174: ['FBtr0343753', 'FBtr0433525'] 2021-10-25 09:33:10.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038851: ['FBtr0084007'] 2021-10-25 09:33:10.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038851 has a single transcript. 2021-10-25 09:33:10.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038852: ['FBtr0084037'] 2021-10-25 09:33:10.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052022: ['FBtr0076597', 'FBtr0344992'] 2021-10-25 09:33:10.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038852 has a single transcript. 2021-10-25 09:33:10.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000320: ['FBtr0079335', 'FBtr0079334', 'FBtr0306113'] 2021-10-25 09:33:10.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21356704, 21356810), (21357758, 21358004), (21358204, 21358360)] 2021-10-25 09:33:10.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038853: ['FBtr0084036'] 2021-10-25 09:33:10.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038853 has a single transcript. 2021-10-25 09:33:10.360 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433525_exon_1') contains intron (21358204, 21358360) 2021-10-25 09:33:10.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433525_exon_1'] 2021-10-25 09:33:10.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8029733, 8029815)] 2021-10-25 09:33:10.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038854: ['FBtr0084035'] 2021-10-25 09:33:10.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038854 has a single transcript. 2021-10-25 09:33:10.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035453: ['FBtr0300062'] 2021-10-25 09:33:10.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035453 has a single transcript. 2021-10-25 09:33:10.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038855: ['FBtr0084008'] 2021-10-25 09:33:10.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038855 has a single transcript. 2021-10-25 09:33:10.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025865: ['FBtr0084039', 'FBtr0306347', 'FBtr0306348', 'FBtr0306349'] 2021-10-25 09:33:10.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038857: ['FBtr0084033'] 2021-10-25 09:33:10.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038857 has a single transcript. 2021-10-25 09:33:10.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035455: ['FBtr0073139'] 2021-10-25 09:33:10.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035455 has a single transcript. 2021-10-25 09:33:10.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035458: ['FBtr0303094'] 2021-10-25 09:33:10.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035458 has a single transcript. 2021-10-25 09:33:10.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038858: ['FBtr0333929', 'FBtr0333930', 'FBtr0304713'] 2021-10-25 09:33:10.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8720905, 8720960)] 2021-10-25 09:33:10.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035461: ['FBtr0073185'] 2021-10-25 09:33:10.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035461 has a single transcript. 2021-10-25 09:33:10.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035462: ['FBtr0073148'] 2021-10-25 09:33:10.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035462 has a single transcript. 2021-10-25 09:33:10.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035464: ['FBtr0073149', 'FBtr0073150'] 2021-10-25 09:33:10.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266175: ['FBtr0343754', 'FBtr0433522'] 2021-10-25 09:33:10.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031979: ['FBtr0079540'] 2021-10-25 09:33:10.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031979 has a single transcript. 2021-10-25 09:33:10.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6528191, 6528267), (6528512, 6528574), (6530329, 6532905), (6530329, 6530422), (6532952, 6546448), (6532952, 6535828)] 2021-10-25 09:33:10.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031980: ['FBtr0079546', 'FBtr0345332'] 2021-10-25 09:33:10.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052023: ['FBtr0076588'] 2021-10-25 09:33:10.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052023 has a single transcript. 2021-10-25 09:33:10.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3811415, 3811473), (3811672, 3811945), (3812413, 3812471), (3813053, 3813116), (3813360, 3813450)] 2021-10-25 09:33:10.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052024: ['FBtr0076580'] 2021-10-25 09:33:10.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052024 has a single transcript. 2021-10-25 09:33:10.465 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3813116, 3813958, 'FBtr0073149_exon_5') contains intron (3813360, 3813450) 2021-10-25 09:33:10.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21127592, 21127645), (21127832, 21127954), (21128054, 21128120), (21128217, 21128346), (21128493, 21128551)] 2021-10-25 09:33:10.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21063334, 21063425), (21063829, 21063897), (21064108, 21064294), (21064111, 21064294), (21064363, 21064422)] 2021-10-25 09:33:10.466 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21064294, 21064440, 'FBtr0084039_exon_1') contains intron (21064363, 21064422) 2021-10-25 09:33:10.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073149_exon_5'] 2021-10-25 09:33:10.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.466 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21064294, 21064440, 'FBtr0306347_exon_1') contains intron (21064363, 21064422) 2021-10-25 09:33:10.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084039_exon_1', 'FBtr0306347_exon_1'] 2021-10-25 09:33:10.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21356704, 21356810), (21357758, 21358004), (21359069, 21359362)] 2021-10-25 09:33:10.470 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433522_exon_1') contains intron (21359069, 21359362) 2021-10-25 09:33:10.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433522_exon_1'] 2021-10-25 09:33:10.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052026: ['FBtr0076584'] 2021-10-25 09:33:10.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052026 has a single transcript. 2021-10-25 09:33:10.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052027: ['FBtr0307116'] 2021-10-25 09:33:10.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052027 has a single transcript. 2021-10-25 09:33:10.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8042125, 8042439), (8042613, 8042822)] 2021-10-25 09:33:10.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.482 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052029: ['FBtr0076567'] 2021-10-25 09:33:10.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052029 has a single transcript. 2021-10-25 09:33:10.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259748: ['FBtr0300506'] 2021-10-25 09:33:10.488 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259748 has a single transcript. 2021-10-25 09:33:10.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052034: ['FBtr0076505'] 2021-10-25 09:33:10.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052034 has a single transcript. 2021-10-25 09:33:10.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259749: ['FBtr0339787', 'FBtr0079268', 'FBtr0079269'] 2021-10-25 09:33:10.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052036: ['FBtr0114525'] 2021-10-25 09:33:10.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052036 has a single transcript. 2021-10-25 09:33:10.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052037: ['FBtr0076469', 'FBtr0333866'] 2021-10-25 09:33:10.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266176: ['FBtr0343757', 'FBtr0433524'] 2021-10-25 09:33:10.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035468: ['FBtr0114512'] 2021-10-25 09:33:10.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035468 has a single transcript. 2021-10-25 09:33:10.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035469: ['FBtr0073158', 'FBtr0330095'] 2021-10-25 09:33:10.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000326: ['FBtr0071687'] 2021-10-25 09:33:10.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000326 has a single transcript. 2021-10-25 09:33:10.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031981: ['FBtr0344788', 'FBtr0344789'] 2021-10-25 09:33:10.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9490231, 9490322), (9490507, 9490565), (9490815, 9491473), (9491626, 9491697)] 2021-10-25 09:33:10.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000330: ['FBtr0071033', 'FBtr0332315'] 2021-10-25 09:33:10.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038859: ['FBtr0084030'] 2021-10-25 09:33:10.570 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6469959, 6471327), (6471714, 6471960), (6471714, 6473630), (6471714, 6473649)] 2021-10-25 09:33:10.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038859 has a single transcript. 2021-10-25 09:33:10.571 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.571 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3897091, 3897147)] 2021-10-25 09:33:10.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038860: ['FBtr0084015', 'FBtr0113258'] 2021-10-25 09:33:10.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21356251, 21356317), (21356704, 21356810), (21357758, 21358004), (21358596, 21359584)] 2021-10-25 09:33:10.582 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21355691, 21356704, 'FBtr0433524_exon_3') contains intron (21356251, 21356317) 2021-10-25 09:33:10.582 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433524_exon_1') contains intron (21358596, 21359584) 2021-10-25 09:33:10.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433524_exon_3', 'FBtr0433524_exon_1'] 2021-10-25 09:33:10.582 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.589 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073158': ['FBtr0330095']} 2021-10-25 09:33:10.589 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330095']] 2021-10-25 09:33:10.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8044071, 8044361), (8044071, 8044846), (8044778, 8044846), (8046769, 8046823), (8049217, 8049279), (8051698, 8051879)] 2021-10-25 09:33:10.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035470: ['FBtr0073180'] 2021-10-25 09:33:10.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035470 has a single transcript. 2021-10-25 09:33:10.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.598 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7009663, 7009773), (7010226, 7010282), (7010442, 7010518), (7010844, 7010899), (7010987, 7011056)] 2021-10-25 09:33:10.599 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.600 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052039: ['FBtr0076441', 'FBtr0345605'] 2021-10-25 09:33:10.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035471: ['FBtr0073159'] 2021-10-25 09:33:10.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035471 has a single transcript. 2021-10-25 09:33:10.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035473: ['FBtr0073175', 'FBtr0073176', 'FBtr0333141'] 2021-10-25 09:33:10.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21130397, 21130476), (21130985, 21131061)] 2021-10-25 09:33:10.628 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21130215, 21132720, 'FBtr0084015_exon_1') contains intron (21130397, 21130476) 2021-10-25 09:33:10.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084015_exon_1'] 2021-10-25 09:33:10.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025866: ['FBtr0076343', 'FBtr0304675'] 2021-10-25 09:33:10.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9359187, 9359245), (9359416, 9359475)] 2021-10-25 09:33:10.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266177: ['FBtr0343755', 'FBtr0433523'] 2021-10-25 09:33:10.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031985: ['FBtr0301229', 'FBtr0339674'] 2021-10-25 09:33:10.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259785: ['FBtr0078336', 'FBtr0331793'] 2021-10-25 09:33:10.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000337: ['FBtr0344723'] 2021-10-25 09:33:10.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000337 has a single transcript. 2021-10-25 09:33:10.685 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9890224, 9890290), (9890565, 9890783)] 2021-10-25 09:33:10.687 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.687 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3908531, 3908778), (3908531, 3909003), (3909039, 3909220), (3909039, 3909756)] 2021-10-25 09:33:10.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000339: ['FBtr0080848', 'FBtr0080849', 'FBtr0337082'] 2021-10-25 09:33:10.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038861: ['FBtr0084029'] 2021-10-25 09:33:10.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038861 has a single transcript. 2021-10-25 09:33:10.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8117713, 8117778), (8117861, 8117926), (8118849, 8118903), (8119066, 8119219), (8119407, 8119503), (8120157, 8120244), (8120583, 8120693), (8121409, 8121472), (8121903, 8121960), (8122532, 8122708), (8123245, 8123303), (8123435, 8123691)] 2021-10-25 09:33:10.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21356704, 21356810), (21357364, 21357475), (21357758, 21358004), (21359069, 21359584)] 2021-10-25 09:33:10.703 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21356810, 21357758, 'FBtr0433523_exon_2') contains intron (21357364, 21357475) 2021-10-25 09:33:10.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.703 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433523_exon_1') contains intron (21359069, 21359584) 2021-10-25 09:33:10.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.704 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433523_exon_2', 'FBtr0433523_exon_1'] 2021-10-25 09:33:10.704 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038862: ['FBtr0084016', 'FBtr0304714'] 2021-10-25 09:33:10.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052040: ['FBtr0076440'] 2021-10-25 09:33:10.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052040 has a single transcript. 2021-10-25 09:33:10.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21287067, 21287127), (21289546, 21289605)] 2021-10-25 09:33:10.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052053: ['FBtr0076315'] 2021-10-25 09:33:10.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052053 has a single transcript. 2021-10-25 09:33:10.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052054: ['FBtr0076314'] 2021-10-25 09:33:10.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052054 has a single transcript. 2021-10-25 09:33:10.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052055: ['FBtr0076304'] 2021-10-25 09:33:10.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052055 has a single transcript. 2021-10-25 09:33:10.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052056: ['FBtr0076301', 'FBtr0076302', 'FBtr0076303'] 2021-10-25 09:33:10.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21134505, 21134568), (21135057, 21135116), (21135279, 21135334), (21135817, 21135872), (21136316, 21136714), (21136646, 21136714), (21136945, 21137008), (21137463, 21137519)] 2021-10-25 09:33:10.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16309930, 16309999), (16310143, 16310266), (16310379, 16310440), (16310623, 16310690), (16310640, 16310690)] 2021-10-25 09:33:10.755 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16310440, 16310726, 'FBtr0080849_exon_1') contains intron (16310623, 16310690) 2021-10-25 09:33:10.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080849_exon_1'] 2021-10-25 09:33:10.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025874: ['FBtr0075791', 'FBtr0333030'] 2021-10-25 09:33:10.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266178: ['FBtr0343756', 'FBtr0347109', 'FBtr0433527'] 2021-10-25 09:33:10.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031986: ['FBtr0079575'] 2021-10-25 09:33:10.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031986 has a single transcript. 2021-10-25 09:33:10.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031987: ['FBtr0079642'] 2021-10-25 09:33:10.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031987 has a single transcript. 2021-10-25 09:33:10.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031988: ['FBtr0079576', 'FBtr0339671'] 2021-10-25 09:33:10.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259789: ['FBtr0307537', 'FBtr0074807', 'FBtr0074808', 'FBtr0345014', 'FBtr0344733'] 2021-10-25 09:33:10.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10221132, 10221393), (10221552, 10221610), (10222088, 10222905), (10222101, 10223867), (10222101, 10222905), (10224237, 10224859)] 2021-10-25 09:33:10.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035475: ['FBtr0073173', 'FBtr0345342'] 2021-10-25 09:33:10.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038865: ['FBtr0084028'] 2021-10-25 09:33:10.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038865 has a single transcript. 2021-10-25 09:33:10.809 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13964013, 13964154), (13964013, 13964118)] 2021-10-25 09:33:10.811 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.811 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038866: ['FBtr0084026'] 2021-10-25 09:33:10.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038866 has a single transcript. 2021-10-25 09:33:10.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038868: ['FBtr0084049'] 2021-10-25 09:33:10.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038868 has a single transcript. 2021-10-25 09:33:10.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038869: ['FBtr0084108'] 2021-10-25 09:33:10.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038869 has a single transcript. 2021-10-25 09:33:10.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8127646, 8131286), (8127972, 8131286), (8131912, 8131972), (8132194, 8132594)] 2021-10-25 09:33:10.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038870: ['FBtr0084050'] 2021-10-25 09:33:10.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038870 has a single transcript. 2021-10-25 09:33:10.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21354694, 21354973), (21355089, 21355757), (21355557, 21355757), (21356704, 21356810), (21356968, 21357114), (21357758, 21358004), (21359069, 21359362)] 2021-10-25 09:33:10.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038871: ['FBtr0084107', 'FBtr0347217'] 2021-10-25 09:33:10.843 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21354444, 21355089, 'FBtr0347109_exon_6') contains intron (21354694, 21354973) 2021-10-25 09:33:10.844 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21354973, 21356704, 'FBtr0433527_exon_3') contains intron (21355089, 21355757) 2021-10-25 09:33:10.844 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21356810, 21357758, 'FBtr0433527_exon_2') contains intron (21356968, 21357114) 2021-10-25 09:33:10.845 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433527_exon_1') contains intron (21359069, 21359362) 2021-10-25 09:33:10.845 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347109_exon_6', 'FBtr0433527_exon_3', 'FBtr0433527_exon_2', 'FBtr0433527_exon_1'] 2021-10-25 09:33:10.845 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3937393, 3937452)] 2021-10-25 09:33:10.851 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000346: ['FBtr0073754', 'FBtr0333329'] 2021-10-25 09:33:10.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025878: ['FBtr0071821'] 2021-10-25 09:33:10.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025878 has a single transcript. 2021-10-25 09:33:10.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025879: ['FBtr0082245'] 2021-10-25 09:33:10.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025879 has a single transcript. 2021-10-25 09:33:10.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21223194, 21223256)] 2021-10-25 09:33:10.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031990: ['FBtr0079641', 'FBtr0302595', 'FBtr0339673', 'FBtr0344863'] 2021-10-25 09:33:10.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025881: ['FBtr0079907'] 2021-10-25 09:33:10.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025881 has a single transcript. 2021-10-25 09:33:10.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025882: ['FBtr0077222'] 2021-10-25 09:33:10.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025882 has a single transcript. 2021-10-25 09:33:10.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025885: ['FBtr0089329'] 2021-10-25 09:33:10.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0025885 has a single transcript. 2021-10-25 09:33:10.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052057: ['FBtr0076308', 'FBtr0076309', 'FBtr0076310', 'FBtr0331552'] 2021-10-25 09:33:10.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035476: ['FBtr0073172'] 2021-10-25 09:33:10.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035476 has a single transcript. 2021-10-25 09:33:10.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13259254, 13259335), (13259424, 13259502), (13259721, 13259794), (13261423, 13261504), (13261663, 13261731), (13261971, 13262034)] 2021-10-25 09:33:10.916 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13261731, 13262488, 'FBtr0073754_exon_6') contains intron (13261971, 13262034) 2021-10-25 09:33:10.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073754_exon_6'] 2021-10-25 09:33:10.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0025936: ['FBtr0089082', 'FBtr0089083', 'FBtr0089084', 'FBtr0089085', 'FBtr0089086', 'FBtr0301285'] 2021-10-25 09:33:10.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035477: ['FBtr0073163', 'FBtr0333134'] 2021-10-25 09:33:10.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19769507, 19778235), (19776937, 19778235), (19782508, 19782853)] 2021-10-25 09:33:10.936 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19775986, 19782508, 'FBtr0074807_exon_2') contains intron (19776937, 19778235) 2021-10-25 09:33:10.936 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19775986, 19783548, 'FBtr0074808_exon_1') contains intron (19776937, 19778235) 2021-10-25 09:33:10.937 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19775986, 19783143, 'FBtr0345014_exon_1') contains intron (19776937, 19778235) 2021-10-25 09:33:10.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074807_exon_2', 'FBtr0074808_exon_1', 'FBtr0345014_exon_1'] 2021-10-25 09:33:10.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038872: ['FBtr0084051', 'FBtr0330376', 'FBtr0339192'] 2021-10-25 09:33:10.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3943294, 3943355), (3943294, 3943346), (3944616, 3944794), (3945600, 3945657)] 2021-10-25 09:33:10.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:10.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266179: ['FBtr0343760'] 2021-10-25 09:33:10.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266179 has a single transcript. 2021-10-25 09:33:10.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000351: ['FBtr0079320', 'FBtr0333350'] 2021-10-25 09:33:10.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266180: ['FBtr0343761'] 2021-10-25 09:33:10.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266180 has a single transcript. 2021-10-25 09:33:10.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266181: ['FBtr0343762'] 2021-10-25 09:33:10.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266181 has a single transcript. 2021-10-25 09:33:10.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8134512, 8134577), (8134773, 8134841), (8135614, 8135673), (8135617, 8135673), (8136092, 8136154), (8136631, 8136704), (8136819, 8136879), (8140778, 8159218), (8140778, 8155772), (8140778, 8156520)] 2021-10-25 09:33:10.984 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8134246, 8134773, 'FBtr0079641_exon_7') contains intron (8134512, 8134577) 2021-10-25 09:33:10.985 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8134246, 8134773, 'FBtr0302595_exon_7') contains intron (8134512, 8134577) 2021-10-25 09:33:10.986 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8134246, 8134773, 'FBtr0344863_exon_7') contains intron (8134512, 8134577) 2021-10-25 09:33:10.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079641_exon_7', 'FBtr0302595_exon_7', 'FBtr0344863_exon_7'] 2021-10-25 09:33:10.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:10.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266182: ['FBtr0343766'] 2021-10-25 09:33:10.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266182 has a single transcript. 2021-10-25 09:33:10.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266183: ['FBtr0343773'] 2021-10-25 09:33:10.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266183 has a single transcript. 2021-10-25 09:33:11.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266186: ['FBtr0089394', 'FBtr0346639'] 2021-10-25 09:33:11.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10149669, 10150332), (10150501, 10150975), (10151103, 10153612), (10151103, 10154761), (10153750, 10154761), (10154972, 10156352), (10156564, 10182242), (10182515, 10185924), (10182515, 10186084), (10182530, 10186022)] 2021-10-25 09:33:11.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.015 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21224079, 21224775), (21225030, 21225097), (21226504, 21226650), (21226504, 21226653), (21227814, 21227931), (21228363, 21228426), (21228582, 21228654)] 2021-10-25 09:33:11.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6675062, 6675121), (6675271, 6675329), (6675701, 6675759), (6676174, 6676239), (6676371, 6676430)] 2021-10-25 09:33:11.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.017 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035478: ['FBtr0073164'] 2021-10-25 09:33:11.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035478 has a single transcript. 2021-10-25 09:33:11.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035479: ['FBtr0073170'] 2021-10-25 09:33:11.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035479 has a single transcript. 2021-10-25 09:33:11.030 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084051': ['FBtr0330376']} 2021-10-25 09:33:11.031 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330376']] 2021-10-25 09:33:11.037 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9841349, 9841407), (9841475, 9841539), (9841768, 9841846), (9842167, 9842300), (9842225, 9842300)] 2021-10-25 09:33:11.038 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(610896, 611284), (611438, 611512), (611655, 611726), (611806, 613614), (613795, 613936), (614422, 615035), (615923, 616004), (616181, 617303), (616181, 618347), (617351, 618347), (618476, 618535), (618631, 618692), (619063, 619636), (619783, 619847), (620107, 620253), (620177, 620253), (621872, 621928)] 2021-10-25 09:33:11.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035480: ['FBtr0290224', 'FBtr0333139'] 2021-10-25 09:33:11.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (611284, 611655, 'FBtr0089082_exon_2') contains intron (611438, 611512) 2021-10-25 09:33:11.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (611284, 611655, 'FBtr0089084_exon_2') contains intron (611438, 611512) 2021-10-25 09:33:11.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (611284, 611655, 'FBtr0089085_exon_2') contains intron (611438, 611512) 2021-10-25 09:33:11.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (619847, 620351, 'FBtr0089085_exon_13') contains intron (620107, 620253) 2021-10-25 09:33:11.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (611284, 611655, 'FBtr0089086_exon_2') contains intron (611438, 611512) 2021-10-25 09:33:11.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089082_exon_2', 'FBtr0089084_exon_2', 'FBtr0089085_exon_2', 'FBtr0089085_exon_13', 'FBtr0089086_exon_2'] 2021-10-25 09:33:11.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038873: ['FBtr0339193'] 2021-10-25 09:33:11.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038873 has a single transcript. 2021-10-25 09:33:11.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3951486, 3951751), (3951876, 3952260)] 2021-10-25 09:33:11.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000352: ['FBtr0089015', 'FBtr0336916'] 2021-10-25 09:33:11.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038874: ['FBtr0084053', 'FBtr0084054', 'FBtr0339194'] 2021-10-25 09:33:11.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266195: ['FBtr0343791'] 2021-10-25 09:33:11.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266195 has a single transcript. 2021-10-25 09:33:11.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266196: ['FBtr0343793'] 2021-10-25 09:33:11.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266196 has a single transcript. 2021-10-25 09:33:11.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266197: ['FBtr0343792'] 2021-10-25 09:33:11.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266197 has a single transcript. 2021-10-25 09:33:11.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259791: ['FBtr0075108'] 2021-10-25 09:33:11.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259791 has a single transcript. 2021-10-25 09:33:11.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266198: ['FBtr0344945'] 2021-10-25 09:33:11.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266198 has a single transcript. 2021-10-25 09:33:11.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7385019, 7385082), (7385501, 7385557), (7386269, 7386327)] 2021-10-25 09:33:11.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259794: ['FBtr0301683'] 2021-10-25 09:33:11.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259794 has a single transcript. 2021-10-25 09:33:11.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266199: ['FBtr0343795', 'FBtr0343796'] 2021-10-25 09:33:11.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259795: ['FBtr0087092', 'FBtr0113086'] 2021-10-25 09:33:11.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035481: ['FBtr0073166', 'FBtr0073168', 'FBtr0073167', 'FBtr0333137', 'FBtr0333138'] 2021-10-25 09:33:11.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031992: ['FBtr0079640', 'FBtr0346463'] 2021-10-25 09:33:11.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21247432, 21258188), (21247439, 21258188), (21259023, 21259470), (21259633, 21259706), (21259887, 21261819), (21259887, 21264019)] 2021-10-25 09:33:11.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10114671, 10154714), (10123168, 10154329), (10154935, 10170126), (10170225, 10207977)] 2021-10-25 09:33:11.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052058: ['FBtr0076293'] 2021-10-25 09:33:11.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052058 has a single transcript. 2021-10-25 09:33:11.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16535129, 16535195)] 2021-10-25 09:33:11.180 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16534942, 16536964, 'FBtr0087092_exon_1') contains intron (16535129, 16535195) 2021-10-25 09:33:11.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087092_exon_1'] 2021-10-25 09:33:11.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052061: ['FBtr0076285'] 2021-10-25 09:33:11.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052061 has a single transcript. 2021-10-25 09:33:11.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000355: ['FBtr0076572'] 2021-10-25 09:33:11.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000355 has a single transcript. 2021-10-25 09:33:11.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052062: ['FBtr0113418', 'FBtr0113419', 'FBtr0305093', 'FBtr0305094', 'FBtr0305095', 'FBtr0305096', 'FBtr0305097', 'FBtr0332985'] 2021-10-25 09:33:11.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000356: ['FBtr0076574'] 2021-10-25 09:33:11.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8162063, 8162122), (8162237, 8162310)] 2021-10-25 09:33:11.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000356 has a single transcript. 2021-10-25 09:33:11.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000357: ['FBtr0076571'] 2021-10-25 09:33:11.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000357 has a single transcript. 2021-10-25 09:33:11.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000358: ['FBtr0076573'] 2021-10-25 09:33:11.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000358 has a single transcript. 2021-10-25 09:33:11.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266200: ['FBtr0343797'] 2021-10-25 09:33:11.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266200 has a single transcript. 2021-10-25 09:33:11.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000359: ['FBtr0071203'] 2021-10-25 09:33:11.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000359 has a single transcript. 2021-10-25 09:33:11.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266201: ['FBtr0343802'] 2021-10-25 09:33:11.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266201 has a single transcript. 2021-10-25 09:33:11.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000360: ['FBtr0071204', 'FBtr0300448'] 2021-10-25 09:33:11.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266202: ['FBtr0343840'] 2021-10-25 09:33:11.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266202 has a single transcript. 2021-10-25 09:33:11.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259817: ['FBtr0300105'] 2021-10-25 09:33:11.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259817 has a single transcript. 2021-10-25 09:33:11.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266203: ['FBtr0343843'] 2021-10-25 09:33:11.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266203 has a single transcript. 2021-10-25 09:33:11.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031995: ['FBtr0079638', 'FBtr0079639', 'FBtr0335186'] 2021-10-25 09:33:11.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259818: ['FBtr0301929', 'FBtr0330643'] 2021-10-25 09:33:11.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266204: ['FBtr0343813'] 2021-10-25 09:33:11.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266204 has a single transcript. 2021-10-25 09:33:11.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266205: ['FBtr0343820'] 2021-10-25 09:33:11.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266205 has a single transcript. 2021-10-25 09:33:11.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038876: ['FBtr0084055', 'FBtr0300616'] 2021-10-25 09:33:11.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266206: ['FBtr0343818'] 2021-10-25 09:33:11.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266206 has a single transcript. 2021-10-25 09:33:11.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3959896, 3961571), (3959896, 3959964), (3962669, 3964490), (3962669, 3963811), (3962669, 3962750)] 2021-10-25 09:33:11.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266207: ['FBtr0343816'] 2021-10-25 09:33:11.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266207 has a single transcript. 2021-10-25 09:33:11.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8481958, 8482184)] 2021-10-25 09:33:11.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266208: ['FBtr0343832'] 2021-10-25 09:33:11.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266208 has a single transcript. 2021-10-25 09:33:11.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266209: ['FBtr0343836'] 2021-10-25 09:33:11.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266209 has a single transcript. 2021-10-25 09:33:11.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(145910, 147348), (145910, 147354), (147454, 147510), (147710, 147764), (147936, 147994), (148037, 148091), (148173, 148337), (148825, 148878), (149226, 151114)] 2021-10-25 09:33:11.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266210: ['FBtr0343847'] 2021-10-25 09:33:11.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266210 has a single transcript. 2021-10-25 09:33:11.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026015: ['FBtr0070930', 'FBtr0340028'] 2021-10-25 09:33:11.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8191430, 8191484), (8191757, 8191812), (8192429, 8192491), (8193064, 8193124), (8193229, 8194044), (8193229, 8195020), (8194059, 8195020), (8195569, 8195628), (8195976, 8196036), (8196389, 8196583), (8196735, 8196795)] 2021-10-25 09:33:11.323 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8193124, 8195569, 'FBtr0079639_exon_5') contains intron (8193229, 8194044) 2021-10-25 09:33:11.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079639_exon_5'] 2021-10-25 09:33:11.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266211: ['FBtr0343859'] 2021-10-25 09:33:11.324 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266211 has a single transcript. 2021-10-25 09:33:11.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266212: ['FBtr0343849'] 2021-10-25 09:33:11.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266212 has a single transcript. 2021-10-25 09:33:11.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266213: ['FBtr0343851'] 2021-10-25 09:33:11.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266213 has a single transcript. 2021-10-25 09:33:11.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21270530, 21270586)] 2021-10-25 09:33:11.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266214: ['FBtr0343861'] 2021-10-25 09:33:11.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266214 has a single transcript. 2021-10-25 09:33:11.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266215: ['FBtr0343876'] 2021-10-25 09:33:11.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266215 has a single transcript. 2021-10-25 09:33:11.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266216: ['FBtr0343872'] 2021-10-25 09:33:11.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266216 has a single transcript. 2021-10-25 09:33:11.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000370: ['FBtr0081513', 'FBtr0081512', 'FBtr0332001', 'FBtr0332002'] 2021-10-25 09:33:11.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266217: ['FBtr0343862'] 2021-10-25 09:33:11.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266217 has a single transcript. 2021-10-25 09:33:11.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6284890, 6284973), (6285367, 6285431), (6286482, 6286821), (6287569, 6287640)] 2021-10-25 09:33:11.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266218: ['FBtr0343863'] 2021-10-25 09:33:11.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266218 has a single transcript. 2021-10-25 09:33:11.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266219: ['FBtr0345755', 'FBtr0343866'] 2021-10-25 09:33:11.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038877: ['FBtr0084102'] 2021-10-25 09:33:11.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038877 has a single transcript. 2021-10-25 09:33:11.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259821: ['FBtr0339974', 'FBtr0336454', 'FBtr0301942'] 2021-10-25 09:33:11.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038878: ['FBtr0084100', 'FBtr0084101', 'FBtr0339195'] 2021-10-25 09:33:11.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10481945, 10506069), (10506563, 10568128), (10516162, 10517961), (10516177, 10517961), (10518306, 10573449), (10518306, 10568128), (10568605, 10573449), (10568605, 10571048), (10571246, 10573449), (10574154, 10574434), (10574488, 10575318), (10575411, 10576420), (10576475, 10577282), (10576475, 10580308), (10577324, 10580308), (10580329, 10581841), (10580329, 10584815), (10582118, 10587626), (10585539, 10587626), (10587687, 10587842), (10587687, 10589355), (10587687, 10590119), (10587896, 10589355), (10587896, 10588659), (10588731, 10589355), (10589516, 10590326), (10590390, 10590520)] 2021-10-25 09:33:11.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6873544, 6873937)] 2021-10-25 09:33:11.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026056: ['FBtr0084002', 'FBtr0336772'] 2021-10-25 09:33:11.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031996: ['FBtr0079586'] 2021-10-25 09:33:11.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031996 has a single transcript. 2021-10-25 09:33:11.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031997: ['FBtr0079587', 'FBtr0079588', 'FBtr0335190'] 2021-10-25 09:33:11.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21311032, 21311752), (21311032, 21311192), (21311531, 21311752), (21312043, 21312124), (21312043, 21312097), (21312208, 21318126), (21315538, 21318126), (21318419, 21318484)] 2021-10-25 09:33:11.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4078532, 4081368), (4081819, 4085317), (4081819, 4093945), (4084181, 4085317), (4085578, 4093945), (4094074, 4094148), (4094456, 4095774), (4095991, 4099865), (4100015, 4101244), (4101388, 4101464), (4101770, 4101860), (4102120, 4102175), (4102443, 4102499)] 2021-10-25 09:33:11.473 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.473 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21274441, 21274502), (21274590, 21275377), (21275297, 21275377), (21275580, 21275638)] 2021-10-25 09:33:11.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21017874, 21017941), (21018074, 21018132), (21018074, 21018129), (21019014, 21019444)] 2021-10-25 09:33:11.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035482: ['FBtr0307170', 'FBtr0289977'] 2021-10-25 09:33:11.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266220: ['FBtr0343868'] 2021-10-25 09:33:11.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266220 has a single transcript. 2021-10-25 09:33:11.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266221: ['FBtr0343881', 'FBtr0343882'] 2021-10-25 09:33:11.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8199461, 8199528), (8200033, 8200101), (8200280, 8200350), (8200280, 8200345)] 2021-10-25 09:33:11.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8200101, 8200652, 'FBtr0079587_exon_3') contains intron (8200280, 8200350) 2021-10-25 09:33:11.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079587_exon_3'] 2021-10-25 09:33:11.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4003964, 4004135), (4004341, 4004415), (4004341, 4004515)] 2021-10-25 09:33:11.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21999944, 22000048), (22000288, 22000385)] 2021-10-25 09:33:11.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21999733, 22000357, 'FBtr0343882_exon_1') contains intron (21999944, 22000048) 2021-10-25 09:33:11.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343882_exon_1'] 2021-10-25 09:33:11.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026058: ['FBtr0074461'] 2021-10-25 09:33:11.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026058 has a single transcript. 2021-10-25 09:33:11.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026059: ['FBtr0110973', 'FBtr0110974', 'FBtr0083233', 'FBtr0083229', 'FBtr0083231', 'FBtr0083232', 'FBtr0303845', 'FBtr0332439'] 2021-10-25 09:33:11.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035483: ['FBtr0073193', 'FBtr0346806'] 2021-10-25 09:33:11.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038879: ['FBtr0084056'] 2021-10-25 09:33:11.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038879 has a single transcript. 2021-10-25 09:33:11.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259822: ['FBtr0300115', 'FBtr0343615', 'FBtr0300536', 'FBtr0343616', 'FBtr0343617', 'FBtr0310279', 'FBtr0310280', 'FBtr0310281', 'FBtr0306386'] 2021-10-25 09:33:11.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266222: ['FBtr0343877', 'FBtr0343878', 'FBtr0343879'] 2021-10-25 09:33:11.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038880: ['FBtr0084098', 'FBtr0301815'] 2021-10-25 09:33:11.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000376: ['FBtr0070495', 'FBtr0070496'] 2021-10-25 09:33:11.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4021639, 4021703), (4022287, 4022345), (4022553, 4022820)] 2021-10-25 09:33:11.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031998: ['FBtr0079637'] 2021-10-25 09:33:11.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031998 has a single transcript. 2021-10-25 09:33:11.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21279843, 21279967), (21280606, 21284077), (21284177, 21291171), (21291238, 21291318), (21292189, 21293892), (21292255, 21293892)] 2021-10-25 09:33:11.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031999: ['FBtr0079589'] 2021-10-25 09:33:11.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031999 has a single transcript. 2021-10-25 09:33:11.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2735104, 2735176), (2735328, 2735395), (2735768, 2735836), (2737413, 2737469), (2737673, 2737921), (2738489, 2738667)] 2021-10-25 09:33:11.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032000: ['FBtr0079634', 'FBtr0079633'] 2021-10-25 09:33:11.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21855431, 21868224), (21867498, 21867569), (21867528, 21868224), (21868303, 21868472), (21868869, 21869639), (21869569, 21869639)] 2021-10-25 09:33:11.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8212692, 8212766)] 2021-10-25 09:33:11.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8212038, 8212902, 'FBtr0079634_exon_1') contains intron (8212692, 8212766) 2021-10-25 09:33:11.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079634_exon_1'] 2021-10-25 09:33:11.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035484: ['FBtr0073284', 'FBtr0073283', 'FBtr0309791', 'FBtr0310046'] 2021-10-25 09:33:11.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000377: ['FBtr0070418'] 2021-10-25 09:33:11.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000377 has a single transcript. 2021-10-25 09:33:11.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038881: ['FBtr0084095', 'FBtr0343805', 'FBtr0343806', 'FBtr0343807'] 2021-10-25 09:33:11.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000382: ['FBtr0070378', 'FBtr0070379', 'FBtr0070380', 'FBtr0333260'] 2021-10-25 09:33:11.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032001: ['FBtr0089935', 'FBtr0332414'] 2021-10-25 09:33:11.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052064: ['FBtr0076288'] 2021-10-25 09:33:11.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052064 has a single transcript. 2021-10-25 09:33:11.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16068614, 16069862), (16069346, 16069862), (16070036, 16070097), (16070481, 16070543), (16071502, 16072688), (16071502, 16071744), (16072967, 16073033), (16073402, 16074417), (16073402, 16077113), (16075163, 16075226), (16077341, 16077402), (16077537, 16087764), (16077537, 16082863), (16087959, 16088020), (16088624, 16088684), (16089595, 16089653), (16089820, 16090417), (16090604, 16090667), (16091090, 16095804), (16091090, 16092844), (16095948, 16096254), (16097073, 16097135), (16097620, 16098630)] 2021-10-25 09:33:11.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16074417, 16076164, 'FBtr0083233_exon_1') contains intron (16075163, 16075226) 2021-10-25 09:33:11.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266223: ['FBtr0343887'] 2021-10-25 09:33:11.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266223 has a single transcript. 2021-10-25 09:33:11.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083233_exon_1'] 2021-10-25 09:33:11.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052066: ['FBtr0076277', 'FBtr0076278'] 2021-10-25 09:33:11.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266224: ['FBtr0343886'] 2021-10-25 09:33:11.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266224 has a single transcript. 2021-10-25 09:33:11.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266225: ['FBtr0343885'] 2021-10-25 09:33:11.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266225 has a single transcript. 2021-10-25 09:33:11.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266226: ['FBtr0343897'] 2021-10-25 09:33:11.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266226 has a single transcript. 2021-10-25 09:33:11.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266227: ['FBtr0343890'] 2021-10-25 09:33:11.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266227 has a single transcript. 2021-10-25 09:33:11.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4023216, 4023275), (4023494, 4023552), (4023627, 4023689), (4024706, 4024944), (4025169, 4025846), (4025169, 4025667)] 2021-10-25 09:33:11.798 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4024944, 4026011, 'FBtr0073284_exon_1') contains intron (4025169, 4025846) 2021-10-25 09:33:11.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073284_exon_1'] 2021-10-25 09:33:11.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266228: ['FBtr0343891'] 2021-10-25 09:33:11.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266228 has a single transcript. 2021-10-25 09:33:11.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8213023, 8213108), (8213282, 8213336), (8213529, 8213780)] 2021-10-25 09:33:11.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21321157, 21321221), (21321419, 21321795), (21322112, 21322172), (21322347, 21322420), (21322566, 21322634), (21322754, 21322838), (21322966, 21323438), (21323527, 21323615), (21323753, 21323880), (21324018, 21324103), (21324217, 21334703), (21324217, 21334526), (21324226, 21334526), (21324226, 21334703), (21334768, 21337676), (21337824, 21341886), (21343048, 21348395)] 2021-10-25 09:33:11.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.814 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266229: ['FBtr0343892'] 2021-10-25 09:33:11.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266229 has a single transcript. 2021-10-25 09:33:11.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11159729, 11159879), (11160336, 11161554), (11160336, 11162261), (11160336, 11162983), (11160336, 11161067), (11161290, 11162983), (11161834, 11162983), (11162525, 11162983), (11163098, 11163221), (11163389, 11163452), (11163937, 11165563), (11163937, 11165584), (11163949, 11165563), (11163949, 11165584), (11165678, 11165744), (11165966, 11166026), (11166143, 11166689), (11166143, 11170367), (11166143, 11175160), (11175291, 11199593), (11199794, 11203308)] 2021-10-25 09:33:11.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10641465, 10641531), (10641794, 10646862), (10647126, 10659364), (10659668, 10660782)] 2021-10-25 09:33:11.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266230: ['FBtr0343893'] 2021-10-25 09:33:11.827 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266230 has a single transcript. 2021-10-25 09:33:11.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2094418, 2095009), (2094940, 2095009), (2095197, 2095269), (2095396, 2108379), (2103775, 2108379), (2108294, 2108379), (2108542, 2109234), (2109414, 2109482), (2109600, 2109728), (2110666, 2110744), (2110835, 2110949), (2111139, 2111204), (2111623, 2111703)] 2021-10-25 09:33:11.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266231: ['FBtr0343894'] 2021-10-25 09:33:11.833 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2111204, 2115701, 'FBtr0070379_exon_8') contains intron (2111623, 2111703) 2021-10-25 09:33:11.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266231 has a single transcript. 2021-10-25 09:33:11.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070379_exon_8'] 2021-10-25 09:33:11.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266232: ['FBtr0343895'] 2021-10-25 09:33:11.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266232 has a single transcript. 2021-10-25 09:33:11.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266233: ['FBtr0343896'] 2021-10-25 09:33:11.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266233 has a single transcript. 2021-10-25 09:33:11.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266234: ['FBtr0343898', 'FBtr0343899'] 2021-10-25 09:33:11.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032002: ['FBtr0079593', 'FBtr0332415'] 2021-10-25 09:33:11.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052068: ['FBtr0113421'] 2021-10-25 09:33:11.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052068 has a single transcript. 2021-10-25 09:33:11.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052069: ['FBtr0076241'] 2021-10-25 09:33:11.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052069 has a single transcript. 2021-10-25 09:33:11.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052071: ['FBtr0076231'] 2021-10-25 09:33:11.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052071 has a single transcript. 2021-10-25 09:33:11.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6102288, 6104751), (6104658, 6104751)] 2021-10-25 09:33:11.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052072: ['FBtr0076232'] 2021-10-25 09:33:11.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052072 has a single transcript. 2021-10-25 09:33:11.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052073: ['FBtr0076230', 'FBtr0345348'] 2021-10-25 09:33:11.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8214487, 8214671)] 2021-10-25 09:33:11.923 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:11.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:11.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:11.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035486: ['FBtr0073197', 'FBtr0344475'] 2021-10-25 09:33:11.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266235: ['FBtr0343900'] 2021-10-25 09:33:11.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266235 has a single transcript. 2021-10-25 09:33:11.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266236: ['FBtr0343901'] 2021-10-25 09:33:11.970 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266236 has a single transcript. 2021-10-25 09:33:11.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266237: ['FBtr0343902'] 2021-10-25 09:33:11.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266237 has a single transcript. 2021-10-25 09:33:11.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266238: ['FBtr0343903'] 2021-10-25 09:33:11.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266238 has a single transcript. 2021-10-25 09:33:11.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032003: ['FBtr0079594'] 2021-10-25 09:33:11.986 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032003 has a single transcript. 2021-10-25 09:33:11.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266239: ['FBtr0343904'] 2021-10-25 09:33:11.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266239 has a single transcript. 2021-10-25 09:33:11.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038886: ['FBtr0334915'] 2021-10-25 09:33:11.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038886 has a single transcript. 2021-10-25 09:33:11.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266240: ['FBtr0343905'] 2021-10-25 09:33:11.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266240 has a single transcript. 2021-10-25 09:33:11.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032004: ['FBtr0079632'] 2021-10-25 09:33:11.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032004 has a single transcript. 2021-10-25 09:33:12.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266241: ['FBtr0343906'] 2021-10-25 09:33:12.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266241 has a single transcript. 2021-10-25 09:33:12.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038887: ['FBtr0113261', 'FBtr0113262'] 2021-10-25 09:33:12.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032005: ['FBtr0079631', 'FBtr0306170'] 2021-10-25 09:33:12.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4032146, 4032193), (4032388, 4032459), (4033096, 4033160), (4033413, 4033463), (4033852, 4033936), (4033977, 4034032), (4034107, 4034163), (4034550, 4034610), (4034885, 4034943), (4035098, 4035164), (4035327, 4035384), (4035474, 4035534)] 2021-10-25 09:33:12.006 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4032140, 4032388, 'FBtr0073197_exon_1') contains intron (4032146, 4032193) 2021-10-25 09:33:12.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073197_exon_1'] 2021-10-25 09:33:12.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000384: ['FBtr0111126', 'FBtr0334157'] 2021-10-25 09:33:12.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266242: ['FBtr0343907'] 2021-10-25 09:33:12.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266242 has a single transcript. 2021-10-25 09:33:12.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266243: ['FBtr0343908'] 2021-10-25 09:33:12.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266243 has a single transcript. 2021-10-25 09:33:12.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052074: ['FBtr0076222'] 2021-10-25 09:33:12.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052074 has a single transcript. 2021-10-25 09:33:12.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266244: ['FBtr0343909'] 2021-10-25 09:33:12.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266244 has a single transcript. 2021-10-25 09:33:12.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266245: ['FBtr0343911'] 2021-10-25 09:33:12.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266245 has a single transcript. 2021-10-25 09:33:12.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052075: ['FBtr0076240', 'FBtr0305898'] 2021-10-25 09:33:12.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266246: ['FBtr0343912'] 2021-10-25 09:33:12.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266246 has a single transcript. 2021-10-25 09:33:12.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266247: ['FBtr0343914'] 2021-10-25 09:33:12.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266247 has a single transcript. 2021-10-25 09:33:12.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266248: ['FBtr0343915'] 2021-10-25 09:33:12.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266248 has a single transcript. 2021-10-25 09:33:12.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22982593, 22990753), (22990892, 22990947), (22991153, 22991207), (22991339, 22991394), (22991534, 22991582)] 2021-10-25 09:33:12.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21403858, 21404040), (21403975, 21404040), (21405509, 21405578), (21405888, 21405977)] 2021-10-25 09:33:12.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8218504, 8218569), (8218679, 8219115), (8218679, 8218853), (8218871, 8219115), (8219298, 8219361), (8219806, 8219869), (8219991, 8220044), (8220434, 8220622)] 2021-10-25 09:33:12.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266249: ['FBtr0343916'] 2021-10-25 09:33:12.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266249 has a single transcript. 2021-10-25 09:33:12.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266250: ['FBtr0343917'] 2021-10-25 09:33:12.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266250 has a single transcript. 2021-10-25 09:33:12.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266251: ['FBtr0343918'] 2021-10-25 09:33:12.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266251 has a single transcript. 2021-10-25 09:33:12.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11062823, 11062902), (11063123, 11063186), (11063401, 11063461), (11064461, 11064520)] 2021-10-25 09:33:12.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.070 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035488: ['FBtr0114509', 'FBtr0332982'] 2021-10-25 09:33:12.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266252: ['FBtr0343919'] 2021-10-25 09:33:12.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266252 has a single transcript. 2021-10-25 09:33:12.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266253: ['FBtr0343920', 'FBtr0345279'] 2021-10-25 09:33:12.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4038579, 4038641), (4038752, 4038813), (4040031, 4040095)] 2021-10-25 09:33:12.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000392: ['FBtr0290322', 'FBtr0346452'] 2021-10-25 09:33:12.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026060: ['FBtr0070884'] 2021-10-25 09:33:12.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026060 has a single transcript. 2021-10-25 09:33:12.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038888: ['FBtr0084089'] 2021-10-25 09:33:12.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038888 has a single transcript. 2021-10-25 09:33:12.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25496220, 25496275), (25496223, 25496275)] 2021-10-25 09:33:12.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026061: ['FBtr0075398', 'FBtr0075399', 'FBtr0345813'] 2021-10-25 09:33:12.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038889: ['FBtr0084109', 'FBtr0334662'] 2021-10-25 09:33:12.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052076: ['FBtr0076217'] 2021-10-25 09:33:12.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052076 has a single transcript. 2021-10-25 09:33:12.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032006: ['FBtr0079625', 'FBtr0079626', 'FBtr0079628', 'FBtr0079629', 'FBtr0301338', 'FBtr0301339', 'FBtr0332416', 'FBtr0302147', 'FBtr0302148', 'FBtr0332417', 'FBtr0332418', 'FBtr0303108', 'FBtr0303109'] 2021-10-25 09:33:12.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052079: ['FBtr0300188'] 2021-10-25 09:33:12.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052079 has a single transcript. 2021-10-25 09:33:12.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052081: ['FBtr0076198'] 2021-10-25 09:33:12.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052081 has a single transcript. 2021-10-25 09:33:12.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6664587, 6664930), (6665791, 6668341), (6668887, 6668945), (6669690, 6669763), (6670513, 6674300)] 2021-10-25 09:33:12.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052082: ['FBtr0076216', 'FBtr0113422', 'FBtr0344833', 'FBtr0334096'] 2021-10-25 09:33:12.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035490: ['FBtr0073203'] 2021-10-25 09:33:12.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035490 has a single transcript. 2021-10-25 09:33:12.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21482461, 21482518), (21482852, 21482980), (21483855, 21483951), (21486603, 21486666), (21486878, 21486932)] 2021-10-25 09:33:12.174 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035491: ['FBtr0073281', 'FBtr0332981'] 2021-10-25 09:33:12.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266254: ['FBtr0343921'] 2021-10-25 09:33:12.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266254 has a single transcript. 2021-10-25 09:33:12.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266255: ['FBtr0343922'] 2021-10-25 09:33:12.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266255 has a single transcript. 2021-10-25 09:33:12.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266256: ['FBtr0343923'] 2021-10-25 09:33:12.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266256 has a single transcript. 2021-10-25 09:33:12.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266257: ['FBtr0343924'] 2021-10-25 09:33:12.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266257 has a single transcript. 2021-10-25 09:33:12.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16564517, 16564575), (16564648, 16564718), (16564960, 16565032), (16565269, 16565608), (16565867, 16572273), (16565867, 16573265)] 2021-10-25 09:33:12.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266258: ['FBtr0343925'] 2021-10-25 09:33:12.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266258 has a single transcript. 2021-10-25 09:33:12.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266259: ['FBtr0343926'] 2021-10-25 09:33:12.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266259 has a single transcript. 2021-10-25 09:33:12.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4047456, 4047698), (4047456, 4047592)] 2021-10-25 09:33:12.227 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.227 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266260: ['FBtr0343910'] 2021-10-25 09:33:12.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266260 has a single transcript. 2021-10-25 09:33:12.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259823: ['FBtr0305613', 'FBtr0305614', 'FBtr0345173'] 2021-10-25 09:33:12.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266261: ['FBtr0343913'] 2021-10-25 09:33:12.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266261 has a single transcript. 2021-10-25 09:33:12.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000394: ['FBtr0070804', 'FBtr0340464', 'FBtr0340465'] 2021-10-25 09:33:12.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038890: ['FBtr0084112', 'FBtr0301211', 'FBtr0301212', 'FBtr0334663', 'FBtr0334664'] 2021-10-25 09:33:12.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266262: ['FBtr0343889', 'FBtr0347427'] 2021-10-25 09:33:12.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4312349, 4313084), (4312349, 4313744), (4313309, 4314588), (4314037, 4314588)] 2021-10-25 09:33:12.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11136288, 11150872), (11151557, 11158138), (11158214, 11158341), (11158425, 11158504), (11158566, 11158628), (11158826, 11158919), (11158985, 11159296), (11159563, 11159758), (11159981, 11160046), (11160726, 11160780), (11160932, 11163386), (11160932, 11163383), (11160932, 11163554), (11160932, 11161471), (11163488, 11163554)] 2021-10-25 09:33:12.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035495: ['FBtr0345137', 'FBtr0308361', 'FBtr0308362', 'FBtr0308363'] 2021-10-25 09:33:12.299 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11161471, 11163984, 'FBtr0076216_exon_12') contains intron (11163488, 11163554) 2021-10-25 09:33:12.299 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11163383, 11163984, 'FBtr0113422_exon_12') contains intron (11163488, 11163554) 2021-10-25 09:33:12.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076216_exon_12', 'FBtr0113422_exon_12'] 2021-10-25 09:33:12.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15250159, 15251931), (15252346, 15252407), (15254307, 15254493), (15254320, 15254493), (15255458, 15255588)] 2021-10-25 09:33:12.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5690157, 5690317), (5690988, 5691891), (5692104, 5692164), (5692309, 5692376)] 2021-10-25 09:33:12.326 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5690001, 5690988, 'FBtr0340465_exon_1') contains intron (5690157, 5690317) 2021-10-25 09:33:12.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340465_exon_1'] 2021-10-25 09:33:12.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026063: ['FBtr0082408', 'FBtr0301427'] 2021-10-25 09:33:12.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266263: ['FBtr0343929'] 2021-10-25 09:33:12.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266263 has a single transcript. 2021-10-25 09:33:12.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266264: ['FBtr0343931'] 2021-10-25 09:33:12.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266264 has a single transcript. 2021-10-25 09:33:12.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21521152, 21522803), (21523032, 21523087), (21523508, 21523566), (21523688, 21523751), (21524117, 21524187), (21524515, 21524578), (21524649, 21525526), (21524649, 21525084), (21525300, 21525526), (21525418, 21525526), (21525763, 21525828), (21526902, 21527155), (21526902, 21527262), (21527401, 21527467)] 2021-10-25 09:33:12.378 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21525828, 21527401, 'FBtr0334664_exon_9') contains intron (21526902, 21527155) 2021-10-25 09:33:12.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334664_exon_9'] 2021-10-25 09:33:12.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266268: ['FBtr0085849', 'FBtr0085850', 'FBtr0085851'] 2021-10-25 09:33:12.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11351162, 11353012)] 2021-10-25 09:33:12.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4087704, 4088959), (4087704, 4088964), (4089214, 4090038), (4090142, 4090272)] 2021-10-25 09:33:12.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259824: ['FBtr0075518', 'FBtr0330161', 'FBtr0333577'] 2021-10-25 09:33:12.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000395: ['FBtr0071610'] 2021-10-25 09:33:12.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000395 has a single transcript. 2021-10-25 09:33:12.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000404: ['FBtr0076075', 'FBtr0304650'] 2021-10-25 09:33:12.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31810940, 31810999), (31811321, 31811376), (31811478, 31811740), (31812119, 31812173)] 2021-10-25 09:33:12.464 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31810459, 31811321, 'FBtr0085850_exon_4') contains intron (31810940, 31810999) 2021-10-25 09:33:12.464 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31810999, 31811478, 'FBtr0085851_exon_2') contains intron (31811321, 31811376) 2021-10-25 09:33:12.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085850_exon_4', 'FBtr0085851_exon_2'] 2021-10-25 09:33:12.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026064: ['FBtr0301426'] 2021-10-25 09:33:12.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026064 has a single transcript. 2021-10-25 09:33:12.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052085: ['FBtr0076133'] 2021-10-25 09:33:12.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052085 has a single transcript. 2021-10-25 09:33:12.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8221967, 8222225), (8222114, 8222225), (8222376, 8222445), (8222518, 8222580), (8222830, 8222891), (8223161, 8223222), (8223344, 8223824), (8223449, 8223824), (8223984, 8224051), (8224531, 8224592), (8225042, 8225105), (8225415, 8225485), (8225415, 8225671), (8225512, 8225671), (8226141, 8226209), (8226393, 8226457), (8226603, 8227651), (8226603, 8228082), (8226606, 8228082), (8226606, 8226928), (8226606, 8227651), (8226606, 8227669), (8227150, 8227669), (8227826, 8228493), (8228257, 8228493), (8229011, 8230124), (8230331, 8238918), (8230331, 8239691), (8230331, 8239074), (8230331, 8230617)] 2021-10-25 09:33:12.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052086: ['FBtr0076147', 'FBtr0305322'] 2021-10-25 09:33:12.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026076: ['FBtr0074174', 'FBtr0074175', 'FBtr0300787'] 2021-10-25 09:33:12.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11827805, 11827869), (11828117, 11828187), (11828392, 11828460), (11828684, 11831726), (11831982, 11832052), (11832243, 11832873), (11832246, 11832873)] 2021-10-25 09:33:12.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.504 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15989188, 15989385), (15990060, 15990128), (15990408, 15990462)] 2021-10-25 09:33:12.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.537 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11583168, 11583267), (11583216, 11583267), (11583444, 11583509)] 2021-10-25 09:33:12.538 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075518': ['FBtr0330161']} 2021-10-25 09:33:12.538 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330161']] 2021-10-25 09:33:12.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15850428, 15850545), (15850710, 15851087), (15851196, 15851584), (15852739, 15853041), (15852739, 15853052), (15852739, 15853142)] 2021-10-25 09:33:12.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.551 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035496: ['FBtr0073208'] 2021-10-25 09:33:12.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035496 has a single transcript. 2021-10-25 09:33:12.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000405: ['FBtr0071913', 'FBtr0071914', 'FBtr0071911', 'FBtr0309858'] 2021-10-25 09:33:12.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266275: ['FBtr0343973'] 2021-10-25 09:33:12.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266275 has a single transcript. 2021-10-25 09:33:12.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266276: ['FBtr0343974'] 2021-10-25 09:33:12.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266276 has a single transcript. 2021-10-25 09:33:12.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035497: ['FBtr0300877', 'FBtr0073273', 'FBtr0073271', 'FBtr0073272', 'FBtr0302303', 'FBtr0302304', 'FBtr0310630'] 2021-10-25 09:33:12.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038892: ['FBtr0084122'] 2021-10-25 09:33:12.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038892 has a single transcript. 2021-10-25 09:33:12.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266277: ['FBtr0343975', 'FBtr0343976'] 2021-10-25 09:33:12.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038893: ['FBtr0084116'] 2021-10-25 09:33:12.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038893 has a single transcript. 2021-10-25 09:33:12.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259831: ['FBtr0112505'] 2021-10-25 09:33:12.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259831 has a single transcript. 2021-10-25 09:33:12.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038894: ['FBtr0084113'] 2021-10-25 09:33:12.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038894 has a single transcript. 2021-10-25 09:33:12.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259832: ['FBtr0112422'] 2021-10-25 09:33:12.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259832 has a single transcript. 2021-10-25 09:33:12.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038897: ['FBtr0084125', 'FBtr0301164'] 2021-10-25 09:33:12.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052087: ['FBtr0076117'] 2021-10-25 09:33:12.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052087 has a single transcript. 2021-10-25 09:33:12.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259834: ['FBtr0074682', 'FBtr0344324'] 2021-10-25 09:33:12.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052088: ['FBtr0332764'] 2021-10-25 09:33:12.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052088 has a single transcript. 2021-10-25 09:33:12.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052091: ['FBtr0076106'] 2021-10-25 09:33:12.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052091 has a single transcript. 2021-10-25 09:33:12.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052093: ['FBtr0076083'] 2021-10-25 09:33:12.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052093 has a single transcript. 2021-10-25 09:33:12.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11791021, 11791081), (11791203, 11791452), (11791203, 11791347)] 2021-10-25 09:33:12.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052095: ['FBtr0076077'] 2021-10-25 09:33:12.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052095 has a single transcript. 2021-10-25 09:33:12.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052099: ['FBtr0076000'] 2021-10-25 09:33:12.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052099 has a single transcript. 2021-10-25 09:33:12.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052100: ['FBtr0076006'] 2021-10-25 09:33:12.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052100 has a single transcript. 2021-10-25 09:33:12.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21740643, 21741666), (21741825, 21741884), (21742359, 21742427), (21742666, 21742720), (21742666, 21742741), (21743987, 21744047)] 2021-10-25 09:33:12.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19311630, 19311693), (19313229, 19313311), (19313438, 19313524), (19313706, 19321655)] 2021-10-25 09:33:12.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052102: ['FBtr0075978'] 2021-10-25 09:33:12.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052102 has a single transcript. 2021-10-25 09:33:12.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22804590, 22804659), (22805558, 22805666), (22805564, 22805666), (22805875, 22805939), (22806085, 22806645), (22806085, 22806273)] 2021-10-25 09:33:12.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026077: ['FBtr0078619', 'FBtr0112922'] 2021-10-25 09:33:12.673 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22805939, 22806303, 'FBtr0071914_exon_1') contains intron (22806085, 22806273) 2021-10-25 09:33:12.674 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071914_exon_1'] 2021-10-25 09:33:12.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052103: ['FBtr0075982', 'FBtr0075983', 'FBtr0332089', 'FBtr0332090'] 2021-10-25 09:33:12.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266278: ['FBtr0343977'] 2021-10-25 09:33:12.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266278 has a single transcript. 2021-10-25 09:33:12.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266279: ['FBtr0343978'] 2021-10-25 09:33:12.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266279 has a single transcript. 2021-10-25 09:33:12.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266280: ['FBtr0343979'] 2021-10-25 09:33:12.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266280 has a single transcript. 2021-10-25 09:33:12.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266281: ['FBtr0343980'] 2021-10-25 09:33:12.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266281 has a single transcript. 2021-10-25 09:33:12.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259837: ['FBtr0300134'] 2021-10-25 09:33:12.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259837 has a single transcript. 2021-10-25 09:33:12.731 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6089693, 6094226), (6093674, 6094226), (6094437, 6094503), (6094692, 6094810), (6095020, 6100709)] 2021-10-25 09:33:12.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266282: ['FBtr0084573'] 2021-10-25 09:33:12.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266282 has a single transcript. 2021-10-25 09:33:12.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259838: ['FBtr0300135'] 2021-10-25 09:33:12.738 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259838 has a single transcript. 2021-10-25 09:33:12.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266284: ['FBtr0070297', 'FBtr0339578'] 2021-10-25 09:33:12.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038901: ['FBtr0084131'] 2021-10-25 09:33:12.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038901 has a single transcript. 2021-10-25 09:33:12.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259839: ['FBtr0300139'] 2021-10-25 09:33:12.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259839 has a single transcript. 2021-10-25 09:33:12.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038902: ['FBtr0084132'] 2021-10-25 09:33:12.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038902 has a single transcript. 2021-10-25 09:33:12.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259840: ['FBtr0300138'] 2021-10-25 09:33:12.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259840 has a single transcript. 2021-10-25 09:33:12.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038903: ['FBtr0084166'] 2021-10-25 09:33:12.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038903 has a single transcript. 2021-10-25 09:33:12.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259841: ['FBtr0300140'] 2021-10-25 09:33:12.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259841 has a single transcript. 2021-10-25 09:33:12.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038909: ['FBtr0084155', 'FBtr0084156', 'FBtr0113263', 'FBtr0334880'] 2021-10-25 09:33:12.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259842: ['FBtr0300141'] 2021-10-25 09:33:12.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259842 has a single transcript. 2021-10-25 09:33:12.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259843: ['FBtr0300137'] 2021-10-25 09:33:12.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259843 has a single transcript. 2021-10-25 09:33:12.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4095122, 4095199), (4095146, 4095199), (4095293, 4095635), (4095874, 4095971), (4095874, 4097506), (4096067, 4096903), (4096978, 4097205), (4096978, 4097506), (4097334, 4097506), (4097804, 4098025), (4098199, 4100779), (4100845, 4100995), (4100845, 4101476), (4102999, 4103064)] 2021-10-25 09:33:12.782 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4097205, 4097804, 'FBtr0300877_exon_4') contains intron (4097334, 4097506) 2021-10-25 09:33:12.784 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300877_exon_4'] 2021-10-25 09:33:12.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259845: ['FBtr0300136'] 2021-10-25 09:33:12.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259845 has a single transcript. 2021-10-25 09:33:12.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12404290, 12404362), (12404936, 12405001), (12405160, 12405333), (12405160, 12408109), (12405160, 12412010), (12412122, 12412184), (12412272, 12412329), (12412456, 12413447), (12414086, 12414705), (12414086, 12414701)] 2021-10-25 09:33:12.789 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1462312, 1462372), (1462578, 1462645), (1463939, 1464013)] 2021-10-25 09:33:12.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259846: ['FBtr0300143'] 2021-10-25 09:33:12.793 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259846 has a single transcript. 2021-10-25 09:33:12.793 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026079: ['FBtr0070669'] 2021-10-25 09:33:12.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026079 has a single transcript. 2021-10-25 09:33:12.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259847: ['FBtr0300144'] 2021-10-25 09:33:12.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259847 has a single transcript. 2021-10-25 09:33:12.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026080: ['FBtr0070668', 'FBtr0333185', 'FBtr0333186'] 2021-10-25 09:33:12.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259848: ['FBtr0300145'] 2021-10-25 09:33:12.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259848 has a single transcript. 2021-10-25 09:33:12.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259849: ['FBtr0300146'] 2021-10-25 09:33:12.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259849 has a single transcript. 2021-10-25 09:33:12.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259850: ['FBtr0346688'] 2021-10-25 09:33:12.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259850 has a single transcript. 2021-10-25 09:33:12.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259851: ['FBtr0300149'] 2021-10-25 09:33:12.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259851 has a single transcript. 2021-10-25 09:33:12.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259852: ['FBtr0300148'] 2021-10-25 09:33:12.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259852 has a single transcript. 2021-10-25 09:33:12.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259853: ['FBtr0300151'] 2021-10-25 09:33:12.848 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259853 has a single transcript. 2021-10-25 09:33:12.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000406: ['FBtr0080932', 'FBtr0331931'] 2021-10-25 09:33:12.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259855: ['FBtr0300152'] 2021-10-25 09:33:12.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259855 has a single transcript. 2021-10-25 09:33:12.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266302: ['FBtr0344006'] 2021-10-25 09:33:12.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266302 has a single transcript. 2021-10-25 09:33:12.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259856: ['FBtr0300153'] 2021-10-25 09:33:12.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259856 has a single transcript. 2021-10-25 09:33:12.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266303: ['FBtr0344031', 'FBtr0344785'] 2021-10-25 09:33:12.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259857: ['FBtr0300154'] 2021-10-25 09:33:12.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259857 has a single transcript. 2021-10-25 09:33:12.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4114929, 4115001), (4115214, 4115296), (4115214, 4115319), (4116544, 4116598), (4116725, 4116792)] 2021-10-25 09:33:12.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259858: ['FBtr0300155'] 2021-10-25 09:33:12.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259858 has a single transcript. 2021-10-25 09:33:12.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.881 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21866450, 21866509), (21866709, 21866766), (21867264, 21867404), (21867326, 21867404), (21867354, 21867404), (21867744, 21867808)] 2021-10-25 09:33:12.882 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21867404, 21867919, 'FBtr0084156_exon_1') contains intron (21867744, 21867808) 2021-10-25 09:33:12.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084156_exon_1'] 2021-10-25 09:33:12.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259859: ['FBtr0300156'] 2021-10-25 09:33:12.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259859 has a single transcript. 2021-10-25 09:33:12.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259860: ['FBtr0300157'] 2021-10-25 09:33:12.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259860 has a single transcript. 2021-10-25 09:33:12.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16789444, 16789516), (16789899, 16790218)] 2021-10-25 09:33:12.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259861: ['FBtr0300158'] 2021-10-25 09:33:12.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259861 has a single transcript. 2021-10-25 09:33:12.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10297897, 10297977), (10297912, 10297977), (10298116, 10298192)] 2021-10-25 09:33:12.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:12.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:12.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259862: ['FBtr0300159'] 2021-10-25 09:33:12.911 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259862 has a single transcript. 2021-10-25 09:33:12.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259863: ['FBtr0346689'] 2021-10-25 09:33:12.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259863 has a single transcript. 2021-10-25 09:33:12.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259864: ['FBtr0300161'] 2021-10-25 09:33:12.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259864 has a single transcript. 2021-10-25 09:33:12.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259869: ['FBtr0346690'] 2021-10-25 09:33:12.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259869 has a single transcript. 2021-10-25 09:33:12.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259870: ['FBtr0300167'] 2021-10-25 09:33:12.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259870 has a single transcript. 2021-10-25 09:33:12.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259875: ['FBtr0346687'] 2021-10-25 09:33:12.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259875 has a single transcript. 2021-10-25 09:33:12.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052104: ['FBtr0075986'] 2021-10-25 09:33:12.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052104 has a single transcript. 2021-10-25 09:33:12.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266304: ['FBtr0344032'] 2021-10-25 09:33:12.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259876: ['FBtr0299507', 'FBtr0301325'] 2021-10-25 09:33:12.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266304 has a single transcript. 2021-10-25 09:33:12.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052105: ['FBtr0075953', 'FBtr0333837'] 2021-10-25 09:33:12.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266305: ['FBtr0344033', 'FBtr0344034'] 2021-10-25 09:33:12.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000411: ['FBtr0075746', 'FBtr0333034', 'FBtr0333035', 'FBtr0333036'] 2021-10-25 09:33:13.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12330253, 12334209), (12330253, 12334206), (12335085, 12335159)] 2021-10-25 09:33:13.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13133559, 13133629), (13133806, 13133882), (13134697, 13134756), (13136857, 13142100), (13136857, 13141661), (13141817, 13142100)] 2021-10-25 09:33:13.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026083: ['FBtr0070643', 'FBtr0300931', 'FBtr0301124', 'FBtr0305179', 'FBtr0305180', 'FBtr0305181', 'FBtr0305182', 'FBtr0305183', 'FBtr0305184', 'FBtr0305185', 'FBtr0345713'] 2021-10-25 09:33:13.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12840993, 12841079)] 2021-10-25 09:33:13.020 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12840894, 12841323, 'FBtr0344034_exon_1') contains intron (12840993, 12841079) 2021-10-25 09:33:13.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344034_exon_1'] 2021-10-25 09:33:13.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038912: ['FBtr0084139'] 2021-10-25 09:33:13.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038912 has a single transcript. 2021-10-25 09:33:13.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052106: ['FBtr0307887', 'FBtr0307888'] 2021-10-25 09:33:13.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14178492, 14178568)] 2021-10-25 09:33:13.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038914: ['FBtr0084153'] 2021-10-25 09:33:13.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038914 has a single transcript. 2021-10-25 09:33:13.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038915: ['FBtr0084152'] 2021-10-25 09:33:13.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038915 has a single transcript. 2021-10-25 09:33:13.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266306: ['FBtr0344035'] 2021-10-25 09:33:13.075 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266306 has a single transcript. 2021-10-25 09:33:13.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038916: ['FBtr0084151'] 2021-10-25 09:33:13.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038916 has a single transcript. 2021-10-25 09:33:13.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259878: ['FBtr0339996', 'FBtr0087398'] 2021-10-25 09:33:13.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035498: ['FBtr0073209', 'FBtr0073210'] 2021-10-25 09:33:13.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038917: ['FBtr0084148'] 2021-10-25 09:33:13.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038917 has a single transcript. 2021-10-25 09:33:13.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266307: ['FBtr0344036'] 2021-10-25 09:33:13.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266307 has a single transcript. 2021-10-25 09:33:13.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038918: ['FBtr0084149'] 2021-10-25 09:33:13.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038918 has a single transcript. 2021-10-25 09:33:13.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266308: ['FBtr0344037'] 2021-10-25 09:33:13.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266308 has a single transcript. 2021-10-25 09:33:13.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038919: ['FBtr0084150'] 2021-10-25 09:33:13.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038919 has a single transcript. 2021-10-25 09:33:13.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266309: ['FBtr0344038'] 2021-10-25 09:33:13.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266309 has a single transcript. 2021-10-25 09:33:13.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12775395, 12775455), (12775533, 12775587), (12777924, 12778024), (12777972, 12778024), (12778223, 12778278)] 2021-10-25 09:33:13.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038921: ['FBtr0084170'] 2021-10-25 09:33:13.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038921 has a single transcript. 2021-10-25 09:33:13.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266310: ['FBtr0344039'] 2021-10-25 09:33:13.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266310 has a single transcript. 2021-10-25 09:33:13.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038922: ['FBtr0084190', 'FBtr0300788'] 2021-10-25 09:33:13.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266311: ['FBtr0344040'] 2021-10-25 09:33:13.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266311 has a single transcript. 2021-10-25 09:33:13.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266312: ['FBtr0344041'] 2021-10-25 09:33:13.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266312 has a single transcript. 2021-10-25 09:33:13.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15224255, 15224321), (15224446, 15232310), (15232559, 15233689), (15233810, 15233917), (15233813, 15233917), (15234792, 15234857), (15235043, 15235860), (15236505, 15241196), (15236542, 15239568), (15239799, 15241196)] 2021-10-25 09:33:13.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266313: ['FBtr0344042', 'FBtr0344043'] 2021-10-25 09:33:13.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.133 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4104118, 4104202)] 2021-10-25 09:33:13.134 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4103563, 4106682, 'FBtr0073209_exon_1') contains intron (4104118, 4104202) 2021-10-25 09:33:13.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073209_exon_1'] 2021-10-25 09:33:13.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032008: ['FBtr0079595', 'FBtr0346906'] 2021-10-25 09:33:13.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22017218, 22017340), (22017922, 22017979), (22018096, 22018623), (22018716, 22018779), (22018827, 22018991)] 2021-10-25 09:33:13.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052107: ['FBtr0345344', 'FBtr0345345'] 2021-10-25 09:33:13.174 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19600764, 19603812), (19600764, 19602451), (19602608, 19603812), (19603913, 19604845)] 2021-10-25 09:33:13.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.190 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8242729, 8242782), (8243184, 8243247)] 2021-10-25 09:33:13.191 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.192 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035499: ['FBtr0073270', 'FBtr0310531'] 2021-10-25 09:33:13.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259896: ['FBtr0080615', 'FBtr0310075', 'FBtr0343644'] 2021-10-25 09:33:13.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12858293, 12858357), (12860729, 12860797)] 2021-10-25 09:33:13.204 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12857281, 12860729, 'FBtr0345345_exon_2') contains intron (12858293, 12858357) 2021-10-25 09:33:13.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345345_exon_2'] 2021-10-25 09:33:13.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038923: ['FBtr0084171'] 2021-10-25 09:33:13.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038923 has a single transcript. 2021-10-25 09:33:13.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000412: ['FBtr0081987', 'FBtr0081988', 'FBtr0301524'] 2021-10-25 09:33:13.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038924: ['FBtr0084186'] 2021-10-25 09:33:13.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038924 has a single transcript. 2021-10-25 09:33:13.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038925: ['FBtr0084185', 'FBtr0335198'] 2021-10-25 09:33:13.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266314: ['FBtr0344044'] 2021-10-25 09:33:13.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266314 has a single transcript. 2021-10-25 09:33:13.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4115142, 4115304), (4115646, 4122155), (4115646, 4115722)] 2021-10-25 09:33:13.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266315: ['FBtr0344045'] 2021-10-25 09:33:13.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266315 has a single transcript. 2021-10-25 09:33:13.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266316: ['FBtr0344046'] 2021-10-25 09:33:13.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266316 has a single transcript. 2021-10-25 09:33:13.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22026390, 22026447), (22027066, 22027159)] 2021-10-25 09:33:13.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266317: ['FBtr0344047'] 2021-10-25 09:33:13.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266317 has a single transcript. 2021-10-25 09:33:13.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13975879, 13976476), (13975879, 13975977)] 2021-10-25 09:33:13.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032010: ['FBtr0079620', 'FBtr0079621', 'FBtr0306391', 'FBtr0306392', 'FBtr0332360', 'FBtr0332361', 'FBtr0332362', 'FBtr0332363', 'FBtr0332364', 'FBtr0332365', 'FBtr0332366', 'FBtr0332367'] 2021-10-25 09:33:13.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.273 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9239171, 9239489), (9239908, 9240045), (9240068, 9240201), (9240068, 9240511)] 2021-10-25 09:33:13.277 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9239489, 9240068, 'FBtr0081987_exon_2') contains intron (9239908, 9240045) 2021-10-25 09:33:13.277 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9239489, 9240068, 'FBtr0081988_exon_2') contains intron (9239908, 9240045) 2021-10-25 09:33:13.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266318: ['FBtr0344048'] 2021-10-25 09:33:13.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266318 has a single transcript. 2021-10-25 09:33:13.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081987_exon_2', 'FBtr0081988_exon_2'] 2021-10-25 09:33:13.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052109: ['FBtr0075918'] 2021-10-25 09:33:13.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052109 has a single transcript. 2021-10-25 09:33:13.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266319: ['FBtr0344049'] 2021-10-25 09:33:13.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266319 has a single transcript. 2021-10-25 09:33:13.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052110: ['FBtr0075931'] 2021-10-25 09:33:13.288 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052110 has a single transcript. 2021-10-25 09:33:13.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266320: ['FBtr0344050'] 2021-10-25 09:33:13.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266320 has a single transcript. 2021-10-25 09:33:13.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052111: ['FBtr0344477', 'FBtr0344478'] 2021-10-25 09:33:13.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266321: ['FBtr0344051'] 2021-10-25 09:33:13.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266321 has a single transcript. 2021-10-25 09:33:13.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266322: ['FBtr0344052', 'FBtr0344053'] 2021-10-25 09:33:13.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035501: ['FBtr0073215', 'FBtr0332658'] 2021-10-25 09:33:13.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4117236, 4117963), (4117281, 4117963), (4117395, 4117963), (4117895, 4117963), (4118279, 4118355), (4119017, 4120295), (4119769, 4120295), (4119888, 4120295), (4120100, 4120295), (4120138, 4120295), (4120424, 4120501), (4120440, 4120501), (4121236, 4121453), (4121930, 4122063), (4125787, 4125923)] 2021-10-25 09:33:13.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4120097, 4120424, 'FBtr0305185_exon_1') contains intron (4120100, 4120295) 2021-10-25 09:33:13.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305185_exon_1'] 2021-10-25 09:33:13.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038926: ['FBtr0084184'] 2021-10-25 09:33:13.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038926 has a single transcript. 2021-10-25 09:33:13.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038927: ['FBtr0084183'] 2021-10-25 09:33:13.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038927 has a single transcript. 2021-10-25 09:33:13.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038928: ['FBtr0084176'] 2021-10-25 09:33:13.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038928 has a single transcript. 2021-10-25 09:33:13.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038929: ['FBtr0084179'] 2021-10-25 09:33:13.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038929 has a single transcript. 2021-10-25 09:33:13.350 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12628407, 12633328), (12633811, 12633870), (12633945, 12644801), (12633945, 12642046), (12642878, 12644801), (12645040, 12645112), (12645211, 12645271), (12645306, 12645362)] 2021-10-25 09:33:13.352 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12633328, 12633945, 'FBtr0344477_exon_2') contains intron (12633811, 12633870) 2021-10-25 09:33:13.352 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344477_exon_2'] 2021-10-25 09:33:13.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.353 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(73642, 73754)] 2021-10-25 09:33:13.354 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (71038, 73836, 'FBtr0344052_exon_1') contains intron (73642, 73754) 2021-10-25 09:33:13.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344052_exon_1'] 2021-10-25 09:33:13.354 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038930: ['FBtr0084182', 'FBtr0335197'] 2021-10-25 09:33:13.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4149025, 4150500), (4149025, 4150221), (4150391, 4150463), (4150722, 4151149), (4151555, 4151617), (4151693, 4151758)] 2021-10-25 09:33:13.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000414: ['FBtr0075318', 'FBtr0330189', 'FBtr0330190', 'FBtr0305084', 'FBtr0305085', 'FBtr0305086', 'FBtr0333625', 'FBtr0333626'] 2021-10-25 09:33:13.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259916: ['FBtr0300199', 'FBtr0332760'] 2021-10-25 09:33:13.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22085865, 22086232)] 2021-10-25 09:33:13.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035504: ['FBtr0301645'] 2021-10-25 09:33:13.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035504 has a single transcript. 2021-10-25 09:33:13.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266323: ['FBtr0344054'] 2021-10-25 09:33:13.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266323 has a single transcript. 2021-10-25 09:33:13.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035505: ['FBtr0073258', 'FBtr0300621'] 2021-10-25 09:33:13.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266324: ['FBtr0344055'] 2021-10-25 09:33:13.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266324 has a single transcript. 2021-10-25 09:33:13.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052112: ['FBtr0075917', 'FBtr0075915', 'FBtr0301047', 'FBtr0331553'] 2021-10-25 09:33:13.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266325: ['FBtr0344056'] 2021-10-25 09:33:13.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266325 has a single transcript. 2021-10-25 09:33:13.441 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8155579, 8158756), (8155579, 8158588), (8158679, 8158756)] 2021-10-25 09:33:13.442 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.442 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266326: ['FBtr0344057'] 2021-10-25 09:33:13.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266326 has a single transcript. 2021-10-25 09:33:13.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266327: ['FBtr0344058'] 2021-10-25 09:33:13.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266327 has a single transcript. 2021-10-25 09:33:13.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266328: ['FBtr0344059'] 2021-10-25 09:33:13.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266328 has a single transcript. 2021-10-25 09:33:13.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266329: ['FBtr0344060'] 2021-10-25 09:33:13.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266329 has a single transcript. 2021-10-25 09:33:13.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266330: ['FBtr0344061'] 2021-10-25 09:33:13.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266330 has a single transcript. 2021-10-25 09:33:13.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038931: ['FBtr0084181'] 2021-10-25 09:33:13.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038931 has a single transcript. 2021-10-25 09:33:13.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266331: ['FBtr0344062'] 2021-10-25 09:33:13.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266331 has a single transcript. 2021-10-25 09:33:13.474 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4179587, 4180730), (4180355, 4180730), (4180967, 4181027), (4181201, 4181254), (4181450, 4181524), (4182873, 4187672)] 2021-10-25 09:33:13.475 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.475 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266346: ['FBtr0071675', 'FBtr0342961'] 2021-10-25 09:33:13.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038934: ['FBtr0310204', 'FBtr0305038'] 2021-10-25 09:33:13.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259917: ['FBtr0300198'] 2021-10-25 09:33:13.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259917 has a single transcript. 2021-10-25 09:33:13.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21693659, 21693717), (21694147, 21694209), (21694359, 21694415), (21696041, 21696598), (21696686, 21697059)] 2021-10-25 09:33:13.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22212021, 22212084), (22214929, 22215179), (22215446, 22215508)] 2021-10-25 09:33:13.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259918: ['FBtr0300200'] 2021-10-25 09:33:13.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259918 has a single transcript. 2021-10-25 09:33:13.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12741800, 12741860), (12741949, 12742904), (12741949, 12742594), (12742131, 12742904), (12742650, 12742904), (12743172, 12743512), (12743625, 12743687), (12743826, 12743887), (12743977, 12744036), (12744746, 12744808)] 2021-10-25 09:33:13.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035508: ['FBtr0073255'] 2021-10-25 09:33:13.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259922: ['FBtr0300217'] 2021-10-25 09:33:13.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259922 has a single transcript. 2021-10-25 09:33:13.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035508 has a single transcript. 2021-10-25 09:33:13.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035510: ['FBtr0073254'] 2021-10-25 09:33:13.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035510 has a single transcript. 2021-10-25 09:33:13.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035511: ['FBtr0073253'] 2021-10-25 09:33:13.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035511 has a single transcript. 2021-10-25 09:33:13.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259923: ['FBtr0074365', 'FBtr0074366', 'FBtr0074367', 'FBtr0074368', 'FBtr0074369', 'FBtr0074370', 'FBtr0074371'] 2021-10-25 09:33:13.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035512: ['FBtr0073252'] 2021-10-25 09:33:13.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035512 has a single transcript. 2021-10-25 09:33:13.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035513: ['FBtr0073223'] 2021-10-25 09:33:13.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035513 has a single transcript. 2021-10-25 09:33:13.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8244501, 8244969), (8244732, 8244969), (8245223, 8245739), (8245223, 8252227), (8246217, 8246673), (8246217, 8247059), (8246217, 8246418), (8246217, 8246860), (8246484, 8246673), (8246766, 8247059), (8246766, 8246860), (8246959, 8247059), (8250128, 8250231), (8250330, 8250401), (8250500, 8250582), (8250681, 8250862), (8250681, 8252227), (8250681, 8251223), (8250967, 8252227), (8250967, 8251223), (8251325, 8252227), (8252533, 8252594), (8252775, 8257077), (8252775, 8252842)] 2021-10-25 09:33:13.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035515: ['FBtr0073225', 'FBtr0073226'] 2021-10-25 09:33:13.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16712934, 16715440), (16714320, 16715440), (16715511, 16715572), (16716169, 16716230), (16716837, 16718246), (16716837, 16718021), (16716837, 16717606), (16717840, 16718021), (16717840, 16718246), (16721016, 16721086), (16721190, 16721257), (16722001, 16722063), (16722193, 16722257)] 2021-10-25 09:33:13.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.576 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.598 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330190': ['FBtr0305085']} 2021-10-25 09:33:13.599 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0305085']] 2021-10-25 09:33:13.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038938: ['FBtr0084201', 'FBtr0301190', 'FBtr0344797', 'FBtr0321268'] 2021-10-25 09:33:13.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266347: ['FBtr0300118', 'FBtr0308330', 'FBtr0308331', 'FBtr0308332', 'FBtr0332872', 'FBtr0346707'] 2021-10-25 09:33:13.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4240274, 4240338), (4240523, 4240785), (4240891, 4240951), (4241176, 4241234), (4241435, 4241493), (4241703, 4241903), (4242090, 4242143)] 2021-10-25 09:33:13.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035517: ['FBtr0073228'] 2021-10-25 09:33:13.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035517 has a single transcript. 2021-10-25 09:33:13.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052113: ['FBtr0273390'] 2021-10-25 09:33:13.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052113 has a single transcript. 2021-10-25 09:33:13.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035518: ['FBtr0073244'] 2021-10-25 09:33:13.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035518 has a single transcript. 2021-10-25 09:33:13.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22298935, 22299712), (22299857, 22300134), (22300646, 22300703), (22300819, 22301229), (22301392, 22301463), (22301640, 22301704), (22301854, 22302046), (22302271, 22302541), (22302669, 22302758), (22303180, 22303556)] 2021-10-25 09:33:13.700 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22298804, 22299857, 'FBtr0344797_exon_1') contains intron (22298935, 22299712) 2021-10-25 09:33:13.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052115: ['FBtr0075904'] 2021-10-25 09:33:13.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052115 has a single transcript. 2021-10-25 09:33:13.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344797_exon_1'] 2021-10-25 09:33:13.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035519: ['FBtr0073229'] 2021-10-25 09:33:13.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035519 has a single transcript. 2021-10-25 09:33:13.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16685411, 16685507), (16685910, 16686309), (16686769, 16687159), (16686769, 16694042), (16694352, 16694617), (16694371, 16695117), (16694371, 16694950), (16694371, 16694617), (16694371, 16694613), (16694419, 16694830)] 2021-10-25 09:33:13.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052117: ['FBtr0075905'] 2021-10-25 09:33:13.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052117 has a single transcript. 2021-10-25 09:33:13.709 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035520: ['FBtr0073243', 'FBtr0333568'] 2021-10-25 09:33:13.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052119: ['FBtr0075867'] 2021-10-25 09:33:13.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052119 has a single transcript. 2021-10-25 09:33:13.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052121: ['FBtr0113424'] 2021-10-25 09:33:13.722 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052121 has a single transcript. 2021-10-25 09:33:13.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052123: ['FBtr0075835'] 2021-10-25 09:33:13.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052123 has a single transcript. 2021-10-25 09:33:13.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052126: ['FBtr0075830'] 2021-10-25 09:33:13.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052126 has a single transcript. 2021-10-25 09:33:13.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052127: ['FBtr0075831'] 2021-10-25 09:33:13.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052127 has a single transcript. 2021-10-25 09:33:13.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052128: ['FBtr0075829'] 2021-10-25 09:33:13.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052128 has a single transcript. 2021-10-25 09:33:13.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23207019, 23210851), (23211160, 23216062), (23216107, 23227437), (23227547, 23247006), (23227547, 23262707), (23227547, 23251452), (23227547, 23238836), (23239017, 23262707), (23247187, 23262707), (23249125, 23262707), (23251579, 23262707), (23262823, 23263798), (23263967, 23264033), (23264170, 23264220), (23264364, 23269403), (23264364, 23278215), (23269523, 23278215), (23278462, 23283732)] 2021-10-25 09:33:13.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052129: ['FBtr0075828'] 2021-10-25 09:33:13.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052129 has a single transcript. 2021-10-25 09:33:13.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4262204, 4262263)] 2021-10-25 09:33:13.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052133: ['FBtr0075784'] 2021-10-25 09:33:13.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052133 has a single transcript. 2021-10-25 09:33:13.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052137: ['FBtr0075757', 'FBtr0075758'] 2021-10-25 09:33:13.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035521: ['FBtr0113136', 'FBtr0113137'] 2021-10-25 09:33:13.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13939458, 13940669), (13939458, 13941290), (13941475, 13959528), (13959825, 13959888), (13960077, 13960621), (13960687, 13960922), (13961103, 13961172)] 2021-10-25 09:33:13.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026084: ['FBtr0070640', 'FBtr0070639', 'FBtr0070641', 'FBtr0307206', 'FBtr0343425'] 2021-10-25 09:33:13.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038941: ['FBtr0084203'] 2021-10-25 09:33:13.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038941 has a single transcript. 2021-10-25 09:33:13.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4262747, 4262797), (4262747, 4262805)] 2021-10-25 09:33:13.881 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038942: ['FBtr0084204'] 2021-10-25 09:33:13.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038942 has a single transcript. 2021-10-25 09:33:13.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000416: ['FBtr0085713', 'FBtr0085714'] 2021-10-25 09:33:13.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038943: ['FBtr0084242'] 2021-10-25 09:33:13.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038943 has a single transcript. 2021-10-25 09:33:13.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038944: ['FBtr0084241', 'FBtr0344227'] 2021-10-25 09:33:13.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052141: ['FBtr0075735'] 2021-10-25 09:33:13.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052141 has a single transcript. 2021-10-25 09:33:13.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052150: ['FBtr0075535', 'FBtr0306852', 'FBtr0306853'] 2021-10-25 09:33:13.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30883917, 30883975), (30884117, 30884174), (30884650, 30884719), (30886547, 30886621), (30886904, 30888660), (30888739, 30888884)] 2021-10-25 09:33:13.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035522: ['FBtr0073231'] 2021-10-25 09:33:13.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035522 has a single transcript. 2021-10-25 09:33:13.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22334928, 22337121), (22337630, 22340164)] 2021-10-25 09:33:13.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035523: ['FBtr0073232', 'FBtr0333566'] 2021-10-25 09:33:13.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4106273, 4109688), (4106273, 4109494), (4106927, 4109688), (4109370, 4109688), (4109509, 4109688), (4109824, 4109896), (4110010, 4110162), (4110010, 4110151)] 2021-10-25 09:33:13.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15838752, 15839508), (15838752, 15839836), (15839654, 15839836), (15839996, 15840731), (15841129, 15843543)] 2021-10-25 09:33:13.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:13.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4278250, 4278740), (4279117, 4279184), (4279339, 4279394), (4279624, 4279680), (4279981, 4280265), (4279981, 4280280), (4280545, 4280611), (4280774, 4280836), (4281058, 4281115)] 2021-10-25 09:33:13.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:13.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266348: ['FBtr0344073'] 2021-10-25 09:33:14.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266348 has a single transcript. 2021-10-25 09:33:14.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000422: ['FBtr0081166', 'FBtr0081167', 'FBtr0290291'] 2021-10-25 09:33:14.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038945: ['FBtr0084240'] 2021-10-25 09:33:14.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038945 has a single transcript. 2021-10-25 09:33:14.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266349: ['FBtr0344074', 'FBtr0344946'] 2021-10-25 09:33:14.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259926: ['FBtr0300221', 'FBtr0300222'] 2021-10-25 09:33:14.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038946: ['FBtr0084205', 'FBtr0310473'] 2021-10-25 09:33:14.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15335228, 15335288)] 2021-10-25 09:33:14.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15334477, 15335752, 'FBtr0344074_exon_1') contains intron (15335228, 15335288) 2021-10-25 09:33:14.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344074_exon_1'] 2021-10-25 09:33:14.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5684102, 5684173)] 2021-10-25 09:33:14.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22351893, 22352310), (22352470, 22352530), (22352696, 22352748), (22352875, 22355691), (22355827, 22355948)] 2021-10-25 09:33:14.058 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5683239, 5684456, 'FBtr0300222_exon_1') contains intron (5684102, 5684173) 2021-10-25 09:33:14.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300222_exon_1'] 2021-10-25 09:33:14.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035524: ['FBtr0073242'] 2021-10-25 09:33:14.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035524 has a single transcript. 2021-10-25 09:33:14.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19118128, 19119155), (19119241, 19120109), (19119241, 19119318), (19119474, 19120109)] 2021-10-25 09:33:14.077 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19119155, 19120306, 'FBtr0290291_exon_1') contains intron (19119241, 19120109) 2021-10-25 09:33:14.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290291_exon_1'] 2021-10-25 09:33:14.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052152: ['FBtr0346507', 'FBtr0346508'] 2021-10-25 09:33:14.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035526: ['FBtr0073233'] 2021-10-25 09:33:14.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035526 has a single transcript. 2021-10-25 09:33:14.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035528: ['FBtr0300776'] 2021-10-25 09:33:14.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035528 has a single transcript. 2021-10-25 09:33:14.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032013: ['FBtr0079597', 'FBtr0329934', 'FBtr0329935'] 2021-10-25 09:33:14.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266350: ['FBtr0344076'] 2021-10-25 09:33:14.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266350 has a single transcript. 2021-10-25 09:33:14.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035529: ['FBtr0300775'] 2021-10-25 09:33:14.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035529 has a single transcript. 2021-10-25 09:33:14.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035532: ['FBtr0073340'] 2021-10-25 09:33:14.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035532 has a single transcript. 2021-10-25 09:33:14.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266351: ['FBtr0344086'] 2021-10-25 09:33:14.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266351 has a single transcript. 2021-10-25 09:33:14.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266352: ['FBtr0344087'] 2021-10-25 09:33:14.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266352 has a single transcript. 2021-10-25 09:33:14.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16141264, 16141326), (16141915, 16142039), (16142128, 16142201)] 2021-10-25 09:33:14.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259927: ['FBtr0310343', 'FBtr0300218'] 2021-10-25 09:33:14.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038947: ['FBtr0084206', 'FBtr0084208', 'FBtr0084209', 'FBtr0084210'] 2021-10-25 09:33:14.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035533: ['FBtr0073339', 'FBtr0113138', 'FBtr0333570', 'FBtr0333571', 'FBtr0308201', 'FBtr0308202', 'FBtr0306533', 'FBtr0306534', 'FBtr0306094', 'FBtr0306095', 'FBtr0306096'] 2021-10-25 09:33:14.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266354: ['FBtr0344096', 'FBtr0344097', 'FBtr0344098', 'FBtr0344099', 'FBtr0344100', 'FBtr0344101', 'FBtr0344102'] 2021-10-25 09:33:14.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026085: ['FBtr0070642', 'FBtr0333183', 'FBtr0333184'] 2021-10-25 09:33:14.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18813798, 18819775), (18820042, 18820333), (18821312, 18821378), (18821475, 18821591), (18822507, 18822581), (18823085, 18823507), (18823085, 18824649), (18823615, 18824649), (18824934, 18824999), (18825152, 18825216), (18826287, 18826392)] 2021-10-25 09:33:14.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8304100, 8304172), (8304577, 8304661), (8304577, 8304843), (8304772, 8304843), (8304987, 8305051)] 2021-10-25 09:33:14.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052153: ['FBtr0075456'] 2021-10-25 09:33:14.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052153 has a single transcript. 2021-10-25 09:33:14.194 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079597': ['FBtr0329935']} 2021-10-25 09:33:14.194 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329935']] 2021-10-25 09:33:14.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052160: ['FBtr0308930'] 2021-10-25 09:33:14.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052160 has a single transcript. 2021-10-25 09:33:14.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000426: ['FBtr0088010'] 2021-10-25 09:33:14.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000426 has a single transcript. 2021-10-25 09:33:14.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052161: ['FBtr0075331'] 2021-10-25 09:33:14.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052161 has a single transcript. 2021-10-25 09:33:14.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052163: ['FBtr0075310', 'FBtr0344805'] 2021-10-25 09:33:14.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000427: ['FBtr0071147', 'FBtr0071145', 'FBtr0071146', 'FBtr0309795', 'FBtr0309796', 'FBtr0310269'] 2021-10-25 09:33:14.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4113769, 4113825), (4113935, 4114063)] 2021-10-25 09:33:14.214 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4113700, 4113935, 'FBtr0333183_exon_1') contains intron (4113769, 4113825) 2021-10-25 09:33:14.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333183_exon_1'] 2021-10-25 09:33:14.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22356749, 22357530), (22356798, 22357530), (22357047, 22357530), (22357671, 22358371), (22358491, 22358562), (22358628, 22359524), (22359760, 22359836)] 2021-10-25 09:33:14.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259932: ['FBtr0300237', 'FBtr0300238', 'FBtr0300239'] 2021-10-25 09:33:14.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032014: ['FBtr0079598'] 2021-10-25 09:33:14.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032014 has a single transcript. 2021-10-25 09:33:14.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16587247, 16587509)] 2021-10-25 09:33:14.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032015: ['FBtr0079613'] 2021-10-25 09:33:14.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032015 has a single transcript. 2021-10-25 09:33:14.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032016: ['FBtr0079599'] 2021-10-25 09:33:14.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032016 has a single transcript. 2021-10-25 09:33:14.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032017: ['FBtr0079612'] 2021-10-25 09:33:14.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032017 has a single transcript. 2021-10-25 09:33:14.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032018: ['FBtr0079600'] 2021-10-25 09:33:14.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032018 has a single transcript. 2021-10-25 09:33:14.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032020: ['FBtr0079601'] 2021-10-25 09:33:14.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032020 has a single transcript. 2021-10-25 09:33:14.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032021: ['FBtr0079609', 'FBtr0346462'] 2021-10-25 09:33:14.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16973381, 16973446), (16973607, 16973665), (16973860, 16973986), (16975153, 16975281), (16975854, 16976035), (16976121, 16976181), (16976276, 16976334), (16976548, 17032424), (16976548, 16983517), (16976548, 17014927), (16976548, 17049352), (16983644, 16986925), (16983644, 16986848), (17015224, 17018125), (17049452, 17066583)] 2021-10-25 09:33:14.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.307 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052170: ['FBtr0075258'] 2021-10-25 09:33:14.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052170 has a single transcript. 2021-10-25 09:33:14.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9972397, 9972880), (9972397, 9972921), (9973001, 9973093)] 2021-10-25 09:33:14.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052173: ['FBtr0075244'] 2021-10-25 09:33:14.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052173 has a single transcript. 2021-10-25 09:33:14.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052174: ['FBtr0075227', 'FBtr0307343', 'FBtr0299819'] 2021-10-25 09:33:14.328 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0344097': ['FBtr0344098'], 'FBtr0344099': ['FBtr0344100']} 2021-10-25 09:33:14.329 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344098'], ['FBtr0344100']] 2021-10-25 09:33:14.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026086: ['FBtr0070299', 'FBtr0070300', 'FBtr0100557', 'FBtr0309961', 'FBtr0309962', 'FBtr0309963', 'FBtr0309965', 'FBtr0307895', 'FBtr0305497', 'FBtr0305498', 'FBtr0305499', 'FBtr0339272', 'FBtr0339273', 'FBtr0339274'] 2021-10-25 09:33:14.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8322241, 8322308), (8322702, 8322773), (8322947, 8324958)] 2021-10-25 09:33:14.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7867903, 7869862), (7867903, 7870185), (7869987, 7870185), (7870001, 7870185), (7870448, 7870505), (7872870, 7872994), (7872921, 7872994)] 2021-10-25 09:33:14.349 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7867198, 7869987, 'FBtr0071145_exon_4') contains intron (7867903, 7869862) 2021-10-25 09:33:14.350 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7867160, 7869987, 'FBtr0310269_exon_4') contains intron (7867903, 7869862) 2021-10-25 09:33:14.351 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071145_exon_4', 'FBtr0310269_exon_4'] 2021-10-25 09:33:14.351 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038948: ['FBtr0084239', 'FBtr0330378'] 2021-10-25 09:33:14.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17429303, 17429376), (17429600, 17429854), (17430059, 17430116), (17430343, 17433598), (17430343, 17433549)] 2021-10-25 09:33:14.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032022: ['FBtr0079602', 'FBtr0079603'] 2021-10-25 09:33:14.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4324220, 4324283), (4324447, 4324921), (4324447, 4324861), (4324450, 4324861), (4324450, 4324921), (4324996, 4325060), (4325383, 4326983), (4325410, 4326983), (4325410, 4326208), (4326244, 4326983), (4327170, 4327232), (4327702, 4327772), (4327917, 4336268), (4336319, 4338066), (4338182, 4363026), (4338182, 4345395), (4363127, 4363747), (4363127, 4363987)] 2021-10-25 09:33:14.413 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.414 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259933: ['FBtr0300240'] 2021-10-25 09:33:14.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259933 has a single transcript. 2021-10-25 09:33:14.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:14.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259935: ['FBtr0300248'] 2021-10-25 09:33:14.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259935 has a single transcript. 2021-10-25 09:33:14.429 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084239': ['FBtr0330378']} 2021-10-25 09:33:14.429 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330378']] 2021-10-25 09:33:14.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038950: ['FBtr0084237'] 2021-10-25 09:33:14.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038950 has a single transcript. 2021-10-25 09:33:14.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259936: ['FBtr0081385', 'FBtr0300249', 'FBtr0300250'] 2021-10-25 09:33:14.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038951: ['FBtr0084236', 'FBtr0305320'] 2021-10-25 09:33:14.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8327583, 8329647), (8329174, 8329647), (8329764, 8332307)] 2021-10-25 09:33:14.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22366703, 22366761), (22367158, 22367217), (22367278, 22367353)] 2021-10-25 09:33:14.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052176: ['FBtr0075218'] 2021-10-25 09:33:14.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052176 has a single transcript. 2021-10-25 09:33:14.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20647788, 20647963), (20648013, 20648188), (20648248, 20648419), (20648479, 20648784)] 2021-10-25 09:33:14.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20648188, 20648479, 'FBtr0081385_exon_3') contains intron (20648248, 20648419) 2021-10-25 09:33:14.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20647532, 20648013, 'FBtr0300249_exon_1') contains intron (20647788, 20647963) 2021-10-25 09:33:14.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081385_exon_3', 'FBtr0300249_exon_1'] 2021-10-25 09:33:14.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052177: ['FBtr0075210'] 2021-10-25 09:33:14.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052177 has a single transcript. 2021-10-25 09:33:14.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032023: ['FBtr0079604'] 2021-10-25 09:33:14.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052179: ['FBtr0075197'] 2021-10-25 09:33:14.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032023 has a single transcript. 2021-10-25 09:33:14.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052179 has a single transcript. 2021-10-25 09:33:14.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266355: ['FBtr0344103'] 2021-10-25 09:33:14.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266355 has a single transcript. 2021-10-25 09:33:14.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052181: ['FBtr0301018'] 2021-10-25 09:33:14.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052181 has a single transcript. 2021-10-25 09:33:14.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032024: ['FBtr0079605'] 2021-10-25 09:33:14.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032024 has a single transcript. 2021-10-25 09:33:14.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266356: ['FBtr0344107'] 2021-10-25 09:33:14.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266356 has a single transcript. 2021-10-25 09:33:14.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052182: ['FBtr0075188'] 2021-10-25 09:33:14.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052182 has a single transcript. 2021-10-25 09:33:14.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032025: ['FBtr0079606', 'FBtr0345779'] 2021-10-25 09:33:14.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266357: ['FBtr0344105'] 2021-10-25 09:33:14.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266357 has a single transcript. 2021-10-25 09:33:14.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052183: ['FBtr0075186'] 2021-10-25 09:33:14.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052183 has a single transcript. 2021-10-25 09:33:14.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038952: ['FBtr0084215'] 2021-10-25 09:33:14.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038952 has a single transcript. 2021-10-25 09:33:14.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266358: ['FBtr0344104'] 2021-10-25 09:33:14.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266358 has a single transcript. 2021-10-25 09:33:14.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052185: ['FBtr0075174'] 2021-10-25 09:33:14.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052185 has a single transcript. 2021-10-25 09:33:14.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266359: ['FBtr0344106'] 2021-10-25 09:33:14.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266359 has a single transcript. 2021-10-25 09:33:14.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052187: ['FBtr0075169'] 2021-10-25 09:33:14.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052187 has a single transcript. 2021-10-25 09:33:14.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038953: ['FBtr0084216'] 2021-10-25 09:33:14.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038953 has a single transcript. 2021-10-25 09:33:14.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266360: ['FBtr0344109'] 2021-10-25 09:33:14.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266360 has a single transcript. 2021-10-25 09:33:14.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052188: ['FBtr0075164'] 2021-10-25 09:33:14.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052188 has a single transcript. 2021-10-25 09:33:14.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038956: ['FBtr0084235', 'FBtr0337047'] 2021-10-25 09:33:14.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266361: ['FBtr0344113'] 2021-10-25 09:33:14.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266361 has a single transcript. 2021-10-25 09:33:14.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052189: ['FBtr0075163'] 2021-10-25 09:33:14.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052189 has a single transcript. 2021-10-25 09:33:14.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266362: ['FBtr0344114'] 2021-10-25 09:33:14.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266362 has a single transcript. 2021-10-25 09:33:14.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052190: ['FBtr0075171'] 2021-10-25 09:33:14.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052190 has a single transcript. 2021-10-25 09:33:14.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266363: ['FBtr0344123', 'FBtr0344124'] 2021-10-25 09:33:14.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052191: ['FBtr0307509', 'FBtr0345382'] 2021-10-25 09:33:14.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8346865, 8349074), (8349611, 8349743)] 2021-10-25 09:33:14.618 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22386990, 22387058), (22387321, 22387378), (22387576, 22388331), (22388483, 22389062), (22389233, 22389313), (22389448, 22389664)] 2021-10-25 09:33:14.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000439: ['FBtr0081621'] 2021-10-25 09:33:14.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000439 has a single transcript. 2021-10-25 09:33:14.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000442: ['FBtr0078042'] 2021-10-25 09:33:14.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000442 has a single transcript. 2021-10-25 09:33:14.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259937: ['FBtr0072258', 'FBtr0100213', 'FBtr0300227', 'FBtr0300861', 'FBtr0304599'] 2021-10-25 09:33:14.655 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17806813, 17806875), (17807772, 17807841), (17808330, 17808419), (17808579, 17808636)] 2021-10-25 09:33:14.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000447: ['FBtr0081890', 'FBtr0300442'] 2021-10-25 09:33:14.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:14.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032026: ['FBtr0079608', 'FBtr0307092'] 2021-10-25 09:33:14.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8652682, 8652736)] 2021-10-25 09:33:14.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266364: ['FBtr0344125'] 2021-10-25 09:33:14.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266364 has a single transcript. 2021-10-25 09:33:14.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1774195, 1778611), (1774195, 1775735), (1774222, 1778369), (1774222, 1775698), (1774222, 1775649), (1774222, 1778611), (1775103, 1775698), (1775738, 1778369), (1775738, 1778611), (1778560, 1778611), (1778699, 1778814), (1778960, 1779089), (1779258, 1780061), (1779369, 1780061), (1780244, 1780330), (1780611, 1780674), (1780825, 1781717), (1781883, 1782935), (1783035, 1783108), (1783588, 1783655)] 2021-10-25 09:33:14.723 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1779089, 1780244, 'FBtr0100557_exon_5') contains intron (1779258, 1780061) 2021-10-25 09:33:14.724 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1779089, 1780244, 'FBtr0309965_exon_5') contains intron (1779258, 1780061) 2021-10-25 09:33:14.725 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1778369, 1778699, 'FBtr0305499_exon_3') contains intron (1778560, 1778611) 2021-10-25 09:33:14.726 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100557_exon_5', 'FBtr0309965_exon_5', 'FBtr0305499_exon_3'] 2021-10-25 09:33:14.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038957: ['FBtr0084219', 'FBtr0084220', 'FBtr0084221'] 2021-10-25 09:33:14.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052192: ['FBtr0075147', 'FBtr0300047'] 2021-10-25 09:33:14.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266365: ['FBtr0344126'] 2021-10-25 09:33:14.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266365 has a single transcript. 2021-10-25 09:33:14.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266366: ['FBtr0344130'] 2021-10-25 09:33:14.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266366 has a single transcript. 2021-10-25 09:33:14.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266369: ['FBtr0081439'] 2021-10-25 09:33:14.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266369 has a single transcript. 2021-10-25 09:33:14.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266371: ['FBtr0344133'] 2021-10-25 09:33:14.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266371 has a single transcript. 2021-10-25 09:33:14.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266372: ['FBtr0344135', 'FBtr0344136'] 2021-10-25 09:33:14.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8355974, 8356044), (8356974, 8357033), (8357299, 8357357), (8357881, 8357942), (8359570, 8359635), (8359844, 8360209), (8360518, 8360946), (8361032, 8361100), (8361198, 8362283), (8361198, 8362038)] 2021-10-25 09:33:14.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18040689, 18040762), (18040689, 18040771), (18040844, 18040927), (18041125, 18041183), (18041329, 18041545)] 2021-10-25 09:33:14.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000448: ['FBtr0088366', 'FBtr0088368', 'FBtr0112799', 'FBtr0330609', 'FBtr0306345', 'FBtr0452140'] 2021-10-25 09:33:14.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24174967, 24175027), (24175396, 24175472), (24175724, 24175916), (24175724, 24185477), (24176191, 24176426), (24176831, 24176892), (24177291, 24184722), (24184793, 24185005), (24185051, 24185238), (24185289, 24185477), (24185527, 24185714), (24185767, 24186221), (24185767, 24185987), (24186021, 24186221)] 2021-10-25 09:33:14.809 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24184722, 24186343, 'FBtr0300861_exon_7') contains intron (24184793, 24185005) 2021-10-25 09:33:14.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300861_exon_7'] 2021-10-25 09:33:14.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10761389, 10761449)] 2021-10-25 09:33:14.812 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10761147, 10761797, 'FBtr0344136_exon_1') contains intron (10761389, 10761449) 2021-10-25 09:33:14.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344136_exon_1'] 2021-10-25 09:33:14.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22390073, 22391193), (22390202, 22391193), (22390929, 22391193), (22391306, 22391368), (22391863, 22391919)] 2021-10-25 09:33:14.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032029: ['FBtr0079649', 'FBtr0079648', 'FBtr0339790', 'FBtr0345734'] 2021-10-25 09:33:14.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052194: ['FBtr0306733'] 2021-10-25 09:33:14.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052194 has a single transcript. 2021-10-25 09:33:14.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052195: ['FBtr0075125', 'FBtr0333696', 'FBtr0333697'] 2021-10-25 09:33:14.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266376: ['FBtr0344173', 'FBtr0344174', 'FBtr0346132'] 2021-10-25 09:33:14.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:14.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038958: ['FBtr0084234'] 2021-10-25 09:33:14.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038958 has a single transcript. 2021-10-25 09:33:14.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18113181, 18114368), (18114757, 18114822), (18115279, 18115343)] 2021-10-25 09:33:14.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038959: ['FBtr0084224'] 2021-10-25 09:33:14.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038959 has a single transcript. 2021-10-25 09:33:14.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035534: ['FBtr0073288', 'FBtr0306093'] 2021-10-25 09:33:14.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038960: ['FBtr0084225'] 2021-10-25 09:33:14.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038960 has a single transcript. 2021-10-25 09:33:14.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8370641, 8372457), (8371247, 8372457), (8372625, 8372686), (8372753, 8372880), (8373288, 8373539), (8373914, 8373983)] 2021-10-25 09:33:14.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.982 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.984 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10208128, 10208190), (10208341, 10208400), (10208644, 10208705), (10208852, 10208920), (10209024, 10209100), (10209264, 10209439), (10209270, 10209439), (10209608, 10209879), (10210107, 10232023), (10210107, 10222476), (10210107, 10236997), (10224024, 10227322), (10224024, 10227328)] 2021-10-25 09:33:14.987 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:14.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:14.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038961: ['FBtr0084231', 'FBtr0337046'] 2021-10-25 09:33:15.014 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088368': ['FBtr0330609']} 2021-10-25 09:33:15.014 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330609']] 2021-10-25 09:33:15.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4364585, 4364678), (4364745, 4364811)] 2021-10-25 09:33:15.024 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4364549, 4364745, 'FBtr0306093_exon_1') contains intron (4364585, 4364678) 2021-10-25 09:33:15.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306093_exon_1'] 2021-10-25 09:33:15.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22408880, 22408939), (22409009, 22409062), (22409337, 22409398), (22409648, 22409711), (22410422, 22410485), (22410681, 22410750), (22410681, 22410856)] 2021-10-25 09:33:15.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259938: ['FBtr0082246', 'FBtr0305151', 'FBtr0305152'] 2021-10-25 09:33:15.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035537: ['FBtr0073338'] 2021-10-25 09:33:15.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035537 has a single transcript. 2021-10-25 09:33:15.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035538: ['FBtr0073337', 'FBtr0100185', 'FBtr0100186'] 2021-10-25 09:33:15.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266377: ['FBtr0344176', 'FBtr0344177', 'FBtr0344178', 'FBtr0344179', 'FBtr0344180', 'FBtr0344181', 'FBtr0344182', 'FBtr0344183', 'FBtr0344184'] 2021-10-25 09:33:15.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052196: ['FBtr0273401', 'FBtr0332868'] 2021-10-25 09:33:15.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038964: ['FBtr0084230'] 2021-10-25 09:33:15.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038964 has a single transcript. 2021-10-25 09:33:15.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038965: ['FBtr0084229', 'FBtr0337044', 'FBtr0345205'] 2021-10-25 09:33:15.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18459876, 18459935), (18460069, 18460868), (18460069, 18460223), (18460346, 18460868)] 2021-10-25 09:33:15.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.151 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032030: ['FBtr0079650'] 2021-10-25 09:33:15.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032030 has a single transcript. 2021-10-25 09:33:15.157 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10389437, 10396696), (10389437, 10396236), (10389437, 10397362), (10396820, 10397362), (10397684, 10397746)] 2021-10-25 09:33:15.158 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032031: ['FBtr0079723'] 2021-10-25 09:33:15.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032031 has a single transcript. 2021-10-25 09:33:15.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032032: ['FBtr0079651'] 2021-10-25 09:33:15.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032032 has a single transcript. 2021-10-25 09:33:15.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032033: ['FBtr0079720', 'FBtr0331995'] 2021-10-25 09:33:15.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4369737, 4369825), (4370084, 4370597), (4371904, 4379420), (4379596, 4380308), (4379596, 4379930)] 2021-10-25 09:33:15.187 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22421602, 22421967), (22422134, 22422195)] 2021-10-25 09:33:15.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052198: ['FBtr0075099'] 2021-10-25 09:33:15.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052198 has a single transcript. 2021-10-25 09:33:15.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8382523, 8382588)] 2021-10-25 09:33:15.219 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.219 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052199: ['FBtr0331419'] 2021-10-25 09:33:15.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052199 has a single transcript. 2021-10-25 09:33:15.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052200: ['FBtr0075107'] 2021-10-25 09:33:15.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052200 has a single transcript. 2021-10-25 09:33:15.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000449: ['FBtr0073205'] 2021-10-25 09:33:15.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000449 has a single transcript. 2021-10-25 09:33:15.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052201: ['FBtr0300051'] 2021-10-25 09:33:15.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052201 has a single transcript. 2021-10-25 09:33:15.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052202: ['FBtr0075051'] 2021-10-25 09:33:15.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052202 has a single transcript. 2021-10-25 09:33:15.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000451: ['FBtr0076305', 'FBtr0076307', 'FBtr0301385', 'FBtr0331551', 'FBtr0339899'] 2021-10-25 09:33:15.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052203: ['FBtr0110771'] 2021-10-25 09:33:15.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052203 has a single transcript. 2021-10-25 09:33:15.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052204: ['FBtr0113429'] 2021-10-25 09:33:15.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052204 has a single transcript. 2021-10-25 09:33:15.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259949: ['FBtr0300295'] 2021-10-25 09:33:15.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259949 has a single transcript. 2021-10-25 09:33:15.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052205: ['FBtr0075000', 'FBtr0472918', 'FBtr0472919'] 2021-10-25 09:33:15.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259950: ['FBtr0300294', 'FBtr0343241'] 2021-10-25 09:33:15.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032034: ['FBtr0079652', 'FBtr0303472'] 2021-10-25 09:33:15.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035539: ['FBtr0073291', 'FBtr0073292'] 2021-10-25 09:33:15.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3388269, 3388331)] 2021-10-25 09:33:15.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038966: ['FBtr0084297', 'FBtr0346142'] 2021-10-25 09:33:15.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23658014, 23665293), (23659352, 23660393), (23659699, 23660393), (23660533, 23665293), (23665887, 23665950), (23666035, 23671975), (23667268, 23669901), (23669367, 23671975), (23670377, 23671975), (23672088, 23674285), (23673748, 23674285), (23674342, 23674413), (23674619, 23674803), (23674863, 23674930), (23674985, 23675106), (23675205, 23675354), (23675465, 23675538), (23675708, 23675777), (23675988, 23677020), (23675988, 23677047), (23677188, 23677248), (23677347, 23677404), (23677653, 23677714), (23677937, 23678001), (23678159, 23678217), (23678488, 23678546)] 2021-10-25 09:33:15.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4384627, 4390449), (4384887, 4390449), (4391221, 4401899), (4402156, 4402224), (4402643, 4402711)] 2021-10-25 09:33:15.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8383270, 8383334)] 2021-10-25 09:33:15.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19422192, 19422580), (19423323, 19423378), (19423567, 19423773)] 2021-10-25 09:33:15.395 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19423378, 19424183, 'FBtr0472919_exon_1') contains intron (19423567, 19423773) 2021-10-25 09:33:15.395 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0472919_exon_1'] 2021-10-25 09:33:15.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.413 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0344180': ['FBtr0344181']} 2021-10-25 09:33:15.413 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344181']] 2021-10-25 09:33:15.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10190592, 10190661), (10191277, 10191572), (10191807, 10195442), (10191807, 10194896), (10194995, 10195442), (10195709, 10195818), (10195971, 10196207), (10195995, 10196207), (10196443, 10201657), (10196443, 10201402)] 2021-10-25 09:33:15.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22423794, 22423851), (22424081, 22424297)] 2021-10-25 09:33:15.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259951: ['FBtr0300296'] 2021-10-25 09:33:15.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259951 has a single transcript. 2021-10-25 09:33:15.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259952: ['FBtr0300297'] 2021-10-25 09:33:15.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259952 has a single transcript. 2021-10-25 09:33:15.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035540: ['FBtr0073293', 'FBtr0330179'] 2021-10-25 09:33:15.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259953: ['FBtr0302203'] 2021-10-25 09:33:15.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259953 has a single transcript. 2021-10-25 09:33:15.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259954: ['FBtr0300300'] 2021-10-25 09:33:15.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259954 has a single transcript. 2021-10-25 09:33:15.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026088: ['FBtr0070364', 'FBtr0331385'] 2021-10-25 09:33:15.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259955: ['FBtr0300301'] 2021-10-25 09:33:15.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259955 has a single transcript. 2021-10-25 09:33:15.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259956: ['FBtr0300302'] 2021-10-25 09:33:15.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259956 has a single transcript. 2021-10-25 09:33:15.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259957: ['FBtr0300303'] 2021-10-25 09:33:15.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259957 has a single transcript. 2021-10-25 09:33:15.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032036: ['FBtr0079653', 'FBtr0079654', 'FBtr0079655', 'FBtr0079656', 'FBtr0079657', 'FBtr0079658', 'FBtr0303467', 'FBtr0303468', 'FBtr0303469', 'FBtr0303470', 'FBtr0303471'] 2021-10-25 09:33:15.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038967: ['FBtr0301711', 'FBtr0337045'] 2021-10-25 09:33:15.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259958: ['FBtr0304639', 'FBtr0300304'] 2021-10-25 09:33:15.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4403895, 4403950), (4404197, 4404258)] 2021-10-25 09:33:15.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1879350, 1879411), (1879558, 1879655)] 2021-10-25 09:33:15.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.506 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073293': ['FBtr0330179']} 2021-10-25 09:33:15.506 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330179']] 2021-10-25 09:33:15.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052206: ['FBtr0331182', 'FBtr0089796'] 2021-10-25 09:33:15.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035541: ['FBtr0073335', 'FBtr0113139'] 2021-10-25 09:33:15.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4441921, 4441975)] 2021-10-25 09:33:15.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.524 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22425595, 22425703), (22426727, 22426838), (22426730, 22426838), (22428020, 22435658)] 2021-10-25 09:33:15.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026089: ['FBtr0070365', 'FBtr0345510'] 2021-10-25 09:33:15.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4405615, 4405784)] 2021-10-25 09:33:15.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19343617, 19345351), (19345710, 19347871), (19348803, 19350233), (19350884, 19355390), (19355578, 19364619), (19364798, 19371085), (19371244, 19372165), (19372402, 19373491), (19373583, 19374735), (19374840, 19381371), (19381497, 19385397), (19385534, 19385854), (19386125, 19412373)] 2021-10-25 09:33:15.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.574 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331182': ['FBtr0089796']} 2021-10-25 09:33:15.575 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0089796']] 2021-10-25 09:33:15.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038968: ['FBtr0084295'] 2021-10-25 09:33:15.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038968 has a single transcript. 2021-10-25 09:33:15.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052207: ['FBtr0472920'] 2021-10-25 09:33:15.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052207 has a single transcript. 2021-10-25 09:33:15.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038972: ['FBtr0084254'] 2021-10-25 09:33:15.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038972 has a single transcript. 2021-10-25 09:33:15.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259959: ['FBtr0300305'] 2021-10-25 09:33:15.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259959 has a single transcript. 2021-10-25 09:33:15.589 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1876911, 1876968)] 2021-10-25 09:33:15.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052208: ['FBtr0273406'] 2021-10-25 09:33:15.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052208 has a single transcript. 2021-10-25 09:33:15.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.590 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038973: ['FBtr0084255'] 2021-10-25 09:33:15.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038973 has a single transcript. 2021-10-25 09:33:15.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052212: ['FBtr0074932'] 2021-10-25 09:33:15.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052212 has a single transcript. 2021-10-25 09:33:15.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259960: ['FBtr0300308'] 2021-10-25 09:33:15.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259960 has a single transcript. 2021-10-25 09:33:15.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038974: ['FBtr0084293'] 2021-10-25 09:33:15.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038974 has a single transcript. 2021-10-25 09:33:15.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052213: ['FBtr0273409'] 2021-10-25 09:33:15.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052213 has a single transcript. 2021-10-25 09:33:15.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259961: ['FBtr0300307'] 2021-10-25 09:33:15.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259961 has a single transcript. 2021-10-25 09:33:15.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052214: ['FBtr0273411', 'FBtr0333843'] 2021-10-25 09:33:15.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259962: ['FBtr0300306'] 2021-10-25 09:33:15.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259962 has a single transcript. 2021-10-25 09:33:15.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038975: ['FBtr0084256', 'FBtr0301485', 'FBtr0334607', 'FBtr0334608', 'FBtr0334609', 'FBtr0334610', 'FBtr0334611', 'FBtr0334612', 'FBtr0345228'] 2021-10-25 09:33:15.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259963: ['FBtr0300309'] 2021-10-25 09:33:15.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259963 has a single transcript. 2021-10-25 09:33:15.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035542: ['FBtr0073294', 'FBtr0073295', 'FBtr0073296', 'FBtr0073297', 'FBtr0113140', 'FBtr0113141', 'FBtr0308033', 'FBtr0308034'] 2021-10-25 09:33:15.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259964: ['FBtr0300310'] 2021-10-25 09:33:15.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259964 has a single transcript. 2021-10-25 09:33:15.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000454: ['FBtr0082831', 'FBtr0082832', 'FBtr0082833', 'FBtr0345229'] 2021-10-25 09:33:15.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259965: ['FBtr0300311', 'FBtr0346715'] 2021-10-25 09:33:15.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026090: ['FBtr0070372', 'FBtr0333511'] 2021-10-25 09:33:15.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19467411, 19467470)] 2021-10-25 09:33:15.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15201762, 15201821), (15201983, 15202036)] 2021-10-25 09:33:15.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.692 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1858406, 1858560), (1858678, 1858735), (1858797, 1858867)] 2021-10-25 09:33:15.693 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.693 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8384493, 8384699), (8384516, 8384699), (8384540, 8384699), (8384566, 8384699), (8384895, 8386216), (8384895, 8384996), (8385097, 8386216), (8386385, 8386474), (8386385, 8386486), (8386385, 8386483), (8387378, 8387658), (8387831, 8387890)] 2021-10-25 09:33:15.727 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8384454, 8384895, 'FBtr0079654_exon_1') contains intron (8384493, 8384699) 2021-10-25 09:33:15.728 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8384699, 8385097, 'FBtr0079656_exon_2') contains intron (8384895, 8384996) 2021-10-25 09:33:15.729 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079654_exon_1', 'FBtr0079656_exon_2'] 2021-10-25 09:33:15.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052218: ['FBtr0304110'] 2021-10-25 09:33:15.731 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052218 has a single transcript. 2021-10-25 09:33:15.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052219: ['FBtr0074914'] 2021-10-25 09:33:15.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052219 has a single transcript. 2021-10-25 09:33:15.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259966: ['FBtr0300323'] 2021-10-25 09:33:15.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259966 has a single transcript. 2021-10-25 09:33:15.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052220: ['FBtr0074911'] 2021-10-25 09:33:15.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052220 has a single transcript. 2021-10-25 09:33:15.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13782451, 13782707), (13782451, 13782694), (13782841, 13783816), (13784093, 13784160), (13784259, 13784316)] 2021-10-25 09:33:15.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259967: ['FBtr0300312', 'FBtr0345495'] 2021-10-25 09:33:15.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052221: ['FBtr0301008'] 2021-10-25 09:33:15.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052221 has a single transcript. 2021-10-25 09:33:15.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026136: ['FBtr0086278'] 2021-10-25 09:33:15.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026136 has a single transcript. 2021-10-25 09:33:15.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052224: ['FBtr0347178'] 2021-10-25 09:33:15.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052224 has a single transcript. 2021-10-25 09:33:15.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266378: ['FBtr0344209'] 2021-10-25 09:33:15.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266378 has a single transcript. 2021-10-25 09:33:15.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026141: ['FBtr0077924', 'FBtr0077925', 'FBtr0305553'] 2021-10-25 09:33:15.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052225: ['FBtr0074845'] 2021-10-25 09:33:15.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052225 has a single transcript. 2021-10-25 09:33:15.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266379: ['FBtr0344193', 'FBtr0345223'] 2021-10-25 09:33:15.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052226: ['FBtr0074846'] 2021-10-25 09:33:15.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052226 has a single transcript. 2021-10-25 09:33:15.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052227: ['FBtr0074848'] 2021-10-25 09:33:15.791 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052227 has a single transcript. 2021-10-25 09:33:15.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052228: ['FBtr0074836'] 2021-10-25 09:33:15.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052228 has a single transcript. 2021-10-25 09:33:15.803 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:15.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052230: ['FBtr0070040', 'FBtr0070041', 'FBtr0331408'] 2021-10-25 09:33:15.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15987509, 15987589), (15987509, 15987584)] 2021-10-25 09:33:15.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1344515, 1344569), (1344515, 1344580)] 2021-10-25 09:33:15.853 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1344460, 1345135, 'FBtr0077924_exon_1') contains intron (1344515, 1344569) 2021-10-25 09:33:15.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077924_exon_1'] 2021-10-25 09:33:15.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4407020, 4417819), (4407384, 4417819), (4414457, 4417819), (4414858, 4417819), (4418494, 4418781), (4418716, 4418781), (4419172, 4419428), (4419262, 4419428), (4419663, 4419739)] 2021-10-25 09:33:15.860 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4418679, 4419172, 'FBtr0113141_exon_1') contains intron (4418716, 4418781) 2021-10-25 09:33:15.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113141_exon_1'] 2021-10-25 09:33:15.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22468615, 22469919), (22468615, 22469481), (22471390, 22471518), (22471995, 22472060), (22472372, 22472436), (22472553, 22472608), (22472993, 22473068), (22473439, 22473637), (22473749, 22478079), (22473758, 22478079), (22478227, 22478287), (22479045, 22479102), (22479453, 22479529), (22479720, 22480795), (22479765, 22480774), (22479765, 22480795), (22481126, 22481841), (22481126, 22482846)] 2021-10-25 09:33:15.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23339369, 23339429), (23339476, 23339533), (23339680, 23341456), (23341602, 23345842)] 2021-10-25 09:33:15.880 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23339325, 23339476, 'FBtr0070040_exon_1') contains intron (23339369, 23339429) 2021-10-25 09:33:15.880 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23339325, 23339476, 'FBtr0331408_exon_1') contains intron (23339369, 23339429) 2021-10-25 09:33:15.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070040_exon_1', 'FBtr0331408_exon_1'] 2021-10-25 09:33:15.881 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259968: ['FBtr0300313', 'FBtr0343514'] 2021-10-25 09:33:15.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266380: ['FBtr0344194'] 2021-10-25 09:33:15.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266380 has a single transcript. 2021-10-25 09:33:15.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266381: ['FBtr0344244'] 2021-10-25 09:33:15.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266381 has a single transcript. 2021-10-25 09:33:15.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266382: ['FBtr0344246'] 2021-10-25 09:33:15.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266382 has a single transcript. 2021-10-25 09:33:15.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266383: ['FBtr0344868'] 2021-10-25 09:33:15.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266383 has a single transcript. 2021-10-25 09:33:15.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000455: ['FBtr0082597', 'FBtr0344982'] 2021-10-25 09:33:15.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266384: ['FBtr0344248', 'FBtr0344249'] 2021-10-25 09:33:15.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25172571, 25172623)] 2021-10-25 09:33:15.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026143: ['FBtr0070182'] 2021-10-25 09:33:15.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026143 has a single transcript. 2021-10-25 09:33:15.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:15.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:15.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.973 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5780529, 5780587), (5780749, 5780818)] 2021-10-25 09:33:15.974 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5780587, 5780863, 'FBtr0344248_exon_1') contains intron (5780749, 5780818) 2021-10-25 09:33:15.974 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344248_exon_1'] 2021-10-25 09:33:15.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:15.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026144: ['FBtr0071052', 'FBtr0071053', 'FBtr0329894'] 2021-10-25 09:33:16.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259969: ['FBtr0300314'] 2021-10-25 09:33:16.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259969 has a single transcript. 2021-10-25 09:33:16.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052232: ['FBtr0073373'] 2021-10-25 09:33:16.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052232 has a single transcript. 2021-10-25 09:33:16.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259970: ['FBtr0300316', 'FBtr0339295'] 2021-10-25 09:33:16.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052237: ['FBtr0073356'] 2021-10-25 09:33:16.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052237 has a single transcript. 2021-10-25 09:33:16.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052238: ['FBtr0073344'] 2021-10-25 09:33:16.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052238 has a single transcript. 2021-10-25 09:33:16.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052240: ['FBtr0073336'] 2021-10-25 09:33:16.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052240 has a single transcript. 2021-10-25 09:33:16.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000459: ['FBtr0074250', 'FBtr0100384'] 2021-10-25 09:33:16.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052241: ['FBtr0303006'] 2021-10-25 09:33:16.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052241 has a single transcript. 2021-10-25 09:33:16.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266388: ['FBtr0344325'] 2021-10-25 09:33:16.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266388 has a single transcript. 2021-10-25 09:33:16.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052243: ['FBtr0073322'] 2021-10-25 09:33:16.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052243 has a single transcript. 2021-10-25 09:33:16.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052246: ['FBtr0302941'] 2021-10-25 09:33:16.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052246 has a single transcript. 2021-10-25 09:33:16.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266389: ['FBtr0344328'] 2021-10-25 09:33:16.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266389 has a single transcript. 2021-10-25 09:33:16.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7337856, 7340303), (7338250, 7340303), (7340516, 7341194), (7341503, 7341573)] 2021-10-25 09:33:16.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052248: ['FBtr0303004'] 2021-10-25 09:33:16.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052248 has a single transcript. 2021-10-25 09:33:16.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266390: ['FBtr0344329'] 2021-10-25 09:33:16.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266390 has a single transcript. 2021-10-25 09:33:16.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052249: ['FBtr0303003'] 2021-10-25 09:33:16.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052249 has a single transcript. 2021-10-25 09:33:16.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266391: ['FBtr0344332'] 2021-10-25 09:33:16.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266391 has a single transcript. 2021-10-25 09:33:16.069 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071052': ['FBtr0329894']} 2021-10-25 09:33:16.070 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329894']] 2021-10-25 09:33:16.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052250: ['FBtr0073287', 'FBtr0306092'] 2021-10-25 09:33:16.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266392: ['FBtr0344331'] 2021-10-25 09:33:16.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266392 has a single transcript. 2021-10-25 09:33:16.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:16.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.075 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266393: ['FBtr0344334'] 2021-10-25 09:33:16.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266393 has a single transcript. 2021-10-25 09:33:16.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266394: ['FBtr0344306'] 2021-10-25 09:33:16.087 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16213344, 16216250)] 2021-10-25 09:33:16.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266394 has a single transcript. 2021-10-25 09:33:16.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266395: ['FBtr0344307'] 2021-10-25 09:33:16.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266395 has a single transcript. 2021-10-25 09:33:16.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266396: ['FBtr0344308'] 2021-10-25 09:33:16.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266396 has a single transcript. 2021-10-25 09:33:16.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266397: ['FBtr0344309'] 2021-10-25 09:33:16.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266397 has a single transcript. 2021-10-25 09:33:16.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266398: ['FBtr0344310'] 2021-10-25 09:33:16.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266398 has a single transcript. 2021-10-25 09:33:16.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266399: ['FBtr0344312'] 2021-10-25 09:33:16.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266399 has a single transcript. 2021-10-25 09:33:16.123 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4318808, 4318914), (4319122, 4319198), (4319259, 4320137)] 2021-10-25 09:33:16.123 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4318754, 4319122, 'FBtr0073287_exon_1') contains intron (4318808, 4318914) 2021-10-25 09:33:16.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073287_exon_1'] 2021-10-25 09:33:16.124 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266400: ['FBtr0344311'] 2021-10-25 09:33:16.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266400 has a single transcript. 2021-10-25 09:33:16.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266401: ['FBtr0344313'] 2021-10-25 09:33:16.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266401 has a single transcript. 2021-10-25 09:33:16.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026147: ['FBtr0304948', 'FBtr0304950', 'FBtr0304951', 'FBtr0304952', 'FBtr0300400', 'FBtr0300401', 'FBtr0300402', 'FBtr0300403', 'FBtr0300404', 'FBtr0304953'] 2021-10-25 09:33:16.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266402: ['FBtr0344314'] 2021-10-25 09:33:16.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266402 has a single transcript. 2021-10-25 09:33:16.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259971: ['FBtr0300315', 'FBtr0333129'] 2021-10-25 09:33:16.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266403: ['FBtr0344345'] 2021-10-25 09:33:16.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266403 has a single transcript. 2021-10-25 09:33:16.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266404: ['FBtr0344346'] 2021-10-25 09:33:16.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266404 has a single transcript. 2021-10-25 09:33:16.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266405: ['FBtr0344348'] 2021-10-25 09:33:16.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266405 has a single transcript. 2021-10-25 09:33:16.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266406: ['FBtr0344349', 'FBtr0344350'] 2021-10-25 09:33:16.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000463: ['FBtr0083739', 'FBtr0083740', 'FBtr0304658'] 2021-10-25 09:33:16.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032039: ['FBtr0079660'] 2021-10-25 09:33:16.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032039 has a single transcript. 2021-10-25 09:33:16.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032040: ['FBtr0079661'] 2021-10-25 09:33:16.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032040 has a single transcript. 2021-10-25 09:33:16.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052251: ['FBtr0073286', 'FBtr0346538'] 2021-10-25 09:33:16.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032042: ['FBtr0079710', 'FBtr0331990'] 2021-10-25 09:33:16.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:16.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035543: ['FBtr0073298'] 2021-10-25 09:33:16.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035543 has a single transcript. 2021-10-25 09:33:16.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035544: ['FBtr0073301'] 2021-10-25 09:33:16.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035544 has a single transcript. 2021-10-25 09:33:16.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21883728, 21884069)] 2021-10-25 09:33:16.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035545: ['FBtr0073302', 'FBtr0290123', 'FBtr0333964'] 2021-10-25 09:33:16.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19306589, 19308706), (19308761, 19311815), (19312064, 19316005), (19316072, 19319817), (19320129, 19325481)] 2021-10-25 09:33:16.246 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4315110, 4315172), (4315420, 4315471), (4316134, 4316192), (4317494, 4317551), (4317804, 4317861), (4318197, 4318259)] 2021-10-25 09:33:16.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.247 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8414888, 8414960)] 2021-10-25 09:33:16.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4446677, 4447176), (4447587, 4447897), (4447587, 4447794)] 2021-10-25 09:33:16.276 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4447176, 4448072, 'FBtr0290123_exon_2') contains intron (4447587, 4447897) 2021-10-25 09:33:16.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290123_exon_2'] 2021-10-25 09:33:16.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266407: ['FBtr0344355'] 2021-10-25 09:33:16.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266407 has a single transcript. 2021-10-25 09:33:16.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259972: ['FBtr0300317', 'FBtr0346540'] 2021-10-25 09:33:16.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266408: ['FBtr0344356', 'FBtr0344357'] 2021-10-25 09:33:16.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032047: ['FBtr0079681'] 2021-10-25 09:33:16.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032047 has a single transcript. 2021-10-25 09:33:16.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052252: ['FBtr0307363'] 2021-10-25 09:33:16.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052252 has a single transcript. 2021-10-25 09:33:16.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032048: ['FBtr0079699', 'FBtr0079700'] 2021-10-25 09:33:16.332 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20897262, 20897319)] 2021-10-25 09:33:16.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052255: ['FBtr0073201'] 2021-10-25 09:33:16.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052255 has a single transcript. 2021-10-25 09:33:16.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052259: ['FBtr0300988', 'FBtr0300989'] 2021-10-25 09:33:16.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038976: ['FBtr0084257', 'FBtr0301486'] 2021-10-25 09:33:16.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19908726, 19908807), (19910165, 19910241)] 2021-10-25 09:33:16.358 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19908807, 19910318, 'FBtr0344357_exon_1') contains intron (19910165, 19910241) 2021-10-25 09:33:16.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344357_exon_1'] 2021-10-25 09:33:16.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000464: ['FBtr0081260', 'FBtr0112800', 'FBtr0305950', 'FBtr0331239', 'FBtr0331240', 'FBtr0331241', 'FBtr0331242'] 2021-10-25 09:33:16.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8492802, 8492966), (8493092, 8493743), (8493092, 8493746), (8493852, 8506634), (8506706, 8506792)] 2021-10-25 09:33:16.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4069461, 4069533), (4069640, 4069702)] 2021-10-25 09:33:16.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035546: ['FBtr0073334'] 2021-10-25 09:33:16.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035546 has a single transcript. 2021-10-25 09:33:16.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035547: ['FBtr0073333'] 2021-10-25 09:33:16.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035547 has a single transcript. 2021-10-25 09:33:16.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22487392, 22487509), (22487719, 22487780)] 2021-10-25 09:33:16.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.421 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10989590, 10989655), (10989870, 10990095), (10989870, 10991058), (10989874, 10991058), (10989874, 10989973), (10989874, 10990095), (10990783, 10991058), (10991885, 10991969), (10992320, 10992373), (10992731, 10992797), (10992922, 10992994), (10993434, 10993502), (10993673, 10993742), (10994021, 10997334), (10997425, 10997492)] 2021-10-25 09:33:16.423 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10993742, 10997897, 'FBtr0304952_exon_9') contains intron (10994021, 10997334) 2021-10-25 09:33:16.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304952_exon_9'] 2021-10-25 09:33:16.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035548: ['FBtr0290225', 'FBtr0346535', 'FBtr0331409'] 2021-10-25 09:33:16.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259973: ['FBtr0300318'] 2021-10-25 09:33:16.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259973 has a single transcript. 2021-10-25 09:33:16.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266409: ['FBtr0344358', 'FBtr0344359', 'FBtr0344360', 'FBtr0344361', 'FBtr0344362'] 2021-10-25 09:33:16.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259974: ['FBtr0300322'] 2021-10-25 09:33:16.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259974 has a single transcript. 2021-10-25 09:33:16.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259975: ['FBtr0300319'] 2021-10-25 09:33:16.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259975 has a single transcript. 2021-10-25 09:33:16.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032049: ['FBtr0079701', 'FBtr0343427'] 2021-10-25 09:33:16.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259977: ['FBtr0086143'] 2021-10-25 09:33:16.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259977 has a single transcript. 2021-10-25 09:33:16.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259978: ['FBtr0086039', 'FBtr0086040', 'FBtr0086041', 'FBtr0300502', 'FBtr0300503', 'FBtr0307530', 'FBtr0307531', 'FBtr0307532'] 2021-10-25 09:33:16.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052260: ['FBtr0073214', 'FBtr0332657'] 2021-10-25 09:33:16.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038977: ['FBtr0084292'] 2021-10-25 09:33:16.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038977 has a single transcript. 2021-10-25 09:33:16.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4461249, 4461316), (4461252, 4461316)] 2021-10-25 09:33:16.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.489 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:16.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038978: ['FBtr0084258'] 2021-10-25 09:33:16.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038978 has a single transcript. 2021-10-25 09:33:16.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038979: ['FBtr0084259', 'FBtr0301483'] 2021-10-25 09:33:16.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4142394, 4143969), (4143756, 4143969), (4144121, 4144409), (4144695, 4144748), (4145042, 4145115), (4145327, 4145408), (4145480, 4145711)] 2021-10-25 09:33:16.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032050: ['FBtr0079698', 'FBtr0343426'] 2021-10-25 09:33:16.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22493018, 22493262)] 2021-10-25 09:33:16.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22727101, 22729208), (22727101, 22728842), (22727491, 22728842), (22727491, 22729208), (22729133, 22729208), (22729284, 22729352), (22729539, 22729609), (22729759, 22729816), (22729879, 22729946)] 2021-10-25 09:33:16.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19587086, 19600857), (19587527, 19600857), (19600931, 19611303), (19607081, 19643330), (19607081, 19610609), (19610799, 19611303), (19611626, 19644267), (19611626, 19643330), (19643372, 19644267), (19643376, 19644267), (19644399, 19644473), (19644635, 19691017), (19691197, 19701223), (19701460, 19701521), (19701668, 19701749), (19702025, 19714888), (19702025, 19702326), (19702034, 19714888), (19702350, 19714888), (19714989, 19715760), (19715953, 19717058), (19717209, 19717317), (19717454, 19719708), (19717454, 19725894), (19717454, 19719702), (19719999, 19725894), (19726034, 19726130), (19729472, 19729538), (19729649, 19729719), (19730025, 19730093)] 2021-10-25 09:33:16.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.555 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19610609, 19611626, 'FBtr0331240_exon_2') contains intron (19610799, 19611303) 2021-10-25 09:33:16.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331240_exon_2'] 2021-10-25 09:33:16.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052262: ['FBtr0073184'] 2021-10-25 09:33:16.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052262 has a single transcript. 2021-10-25 09:33:16.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035550: ['FBtr0303005'] 2021-10-25 09:33:16.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035550 has a single transcript. 2021-10-25 09:33:16.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052263: ['FBtr0073183'] 2021-10-25 09:33:16.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052263 has a single transcript. 2021-10-25 09:33:16.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035551: ['FBtr0073306'] 2021-10-25 09:33:16.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035551 has a single transcript. 2021-10-25 09:33:16.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8510178, 8510526)] 2021-10-25 09:33:16.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035552: ['FBtr0331399'] 2021-10-25 09:33:16.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035552 has a single transcript. 2021-10-25 09:33:16.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035553: ['FBtr0331400'] 2021-10-25 09:33:16.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035553 has a single transcript. 2021-10-25 09:33:16.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052264: ['FBtr0073187', 'FBtr0073188', 'FBtr0113430', 'FBtr0303097', 'FBtr0308637', 'FBtr0308638', 'FBtr0308639', 'FBtr0332986', 'FBtr0332987'] 2021-10-25 09:33:16.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035554: ['FBtr0073328'] 2021-10-25 09:33:16.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035554 has a single transcript. 2021-10-25 09:33:16.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035555: ['FBtr0333588'] 2021-10-25 09:33:16.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035555 has a single transcript. 2021-10-25 09:33:16.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038980: ['FBtr0084260', 'FBtr0100322', 'FBtr0331930', 'FBtr0301484'] 2021-10-25 09:33:16.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035557: ['FBtr0073308', 'FBtr0073309'] 2021-10-25 09:33:16.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5702131, 5702866), (5702187, 5702866), (5702216, 5702866), (5702293, 5702866), (5702388, 5702866), (5702812, 5702866), (5702947, 5703050), (5703404, 5703470), (5704216, 5704285), (5704382, 5704434)] 2021-10-25 09:33:16.662 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0086039_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0086041_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0300502_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5702674, 5702947, 'FBtr0300503_exon_1') contains intron (5702812, 5702866) 2021-10-25 09:33:16.664 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0300503_exon_2') contains intron (5703404, 5703470) 2021-10-25 09:33:16.664 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0307530_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.665 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0307531_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.665 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5703050, 5704216, 'FBtr0307532_exon_3') contains intron (5703404, 5703470) 2021-10-25 09:33:16.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086039_exon_3', 'FBtr0086041_exon_3', 'FBtr0300502_exon_3', 'FBtr0300503_exon_1', 'FBtr0300503_exon_2', 'FBtr0307530_exon_3', 'FBtr0307531_exon_3', 'FBtr0307532_exon_3'] 2021-10-25 09:33:16.666 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032051: ['FBtr0079697'] 2021-10-25 09:33:16.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032051 has a single transcript. 2021-10-25 09:33:16.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032052: ['FBtr0079682'] 2021-10-25 09:33:16.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032052 has a single transcript. 2021-10-25 09:33:16.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4533320, 4535771), (4533525, 4535771), (4536363, 4536889), (4537742, 4537814), (4538180, 4538250), (4538794, 4538866)] 2021-10-25 09:33:16.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032053: ['FBtr0079696'] 2021-10-25 09:33:16.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032053 has a single transcript. 2021-10-25 09:33:16.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032054: ['FBtr0079683', 'FBtr0333413', 'FBtr0333414'] 2021-10-25 09:33:16.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22497357, 22509640), (22510204, 22512740), (22512938, 22513086), (22513258, 22514334), (22514471, 22514544), (22514727, 22515020), (22515174, 22516622), (22515174, 22515301), (22515469, 22516622)] 2021-10-25 09:33:16.776 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22515020, 22515572, 'FBtr0301484_exon_7') contains intron (22515174, 22515301) 2021-10-25 09:33:16.776 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301484_exon_7'] 2021-10-25 09:33:16.776 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035558: ['FBtr0073310', 'FBtr0113142', 'FBtr0113143', 'FBtr0304987'] 2021-10-25 09:33:16.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266410: ['FBtr0344363', 'FBtr0344364', 'FBtr0344365', 'FBtr0344366', 'FBtr0344367', 'FBtr0344368', 'FBtr0344369', 'FBtr0344370'] 2021-10-25 09:33:16.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8517580, 8517659), (8517580, 8517662)] 2021-10-25 09:33:16.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3717407, 3718195), (3718472, 3718637), (3718990, 3721536), (3718990, 3722155), (3721566, 3722155), (3722522, 3722859), (3723105, 3723638), (3723872, 3767136), (3723872, 3758406), (3723872, 3741995), (3743772, 3745827), (3759258, 3765642), (3767568, 3769077), (3769176, 3769241), (3769406, 3794516), (3769406, 3799885), (3769406, 3803313), (3769406, 3780422), (3781412, 3787556), (3803454, 3805820)] 2021-10-25 09:33:16.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4542104, 4542642), (4542248, 4542642), (4542907, 4551001), (4550722, 4551001), (4551940, 4552104)] 2021-10-25 09:33:16.869 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4542119, 4542907, 'FBtr0113143_exon_1') contains intron (4542248, 4542642) 2021-10-25 09:33:16.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113143_exon_1'] 2021-10-25 09:33:16.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026148: ['FBtr0080149'] 2021-10-25 09:33:16.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026148 has a single transcript. 2021-10-25 09:33:16.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000473: ['FBtr0086133'] 2021-10-25 09:33:16.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000473 has a single transcript. 2021-10-25 09:33:16.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026149: ['FBtr0071358'] 2021-10-25 09:33:16.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026149 has a single transcript. 2021-10-25 09:33:16.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000477: ['FBtr0083538'] 2021-10-25 09:33:16.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000477 has a single transcript. 2021-10-25 09:33:16.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038981: ['FBtr0084289'] 2021-10-25 09:33:16.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038981 has a single transcript. 2021-10-25 09:33:16.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026150: ['FBtr0080956', 'FBtr0304931'] 2021-10-25 09:33:16.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038983: ['FBtr0084285'] 2021-10-25 09:33:16.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038983 has a single transcript. 2021-10-25 09:33:16.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032055: ['FBtr0079684', 'FBtr0333415'] 2021-10-25 09:33:16.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038984: ['FBtr0084283', 'FBtr0084284', 'FBtr0084282', 'FBtr0308848', 'FBtr0334561'] 2021-10-25 09:33:16.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000479: ['FBtr0070517', 'FBtr0070518', 'FBtr0070519', 'FBtr0070520', 'FBtr0070521', 'FBtr0070522', 'FBtr0070509', 'FBtr0070511', 'FBtr0070512', 'FBtr0070513', 'FBtr0070515', 'FBtr0333312', 'FBtr0333313', 'FBtr0333314', 'FBtr0333315', 'FBtr0333316', 'FBtr0333317'] 2021-10-25 09:33:16.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16910184, 16910308)] 2021-10-25 09:33:16.962 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16908228, 16910418, 'FBtr0304931_exon_1') contains intron (16910184, 16910308) 2021-10-25 09:33:16.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304931_exon_1'] 2021-10-25 09:33:16.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:16.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8519792, 8519868), (8519981, 8520081), (8520592, 8520685), (8521406, 8521461)] 2021-10-25 09:33:16.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:16.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026160: ['FBtr0076268', 'FBtr0076267', 'FBtr0301658'] 2021-10-25 09:33:17.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9340274, 9354421), (9340769, 9354421), (9341925, 9342219), (9342003, 9342219), (9342491, 9342575), (9342491, 9354421), (9342894, 9354421), (9354854, 9354924), (9355083, 9357983), (9355703, 9356423), (9356325, 9356423), (9357455, 9357983), (9358176, 9358255), (9358571, 9358628)] 2021-10-25 09:33:17.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9341866, 9342491, 'FBtr0344363_exon_1') contains intron (9341925, 9342219) 2021-10-25 09:33:17.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9362994, 'FBtr0344363_exon_6') contains intron (9358571, 9358628) 2021-10-25 09:33:17.037 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9359189, 'FBtr0344364_exon_5') contains intron (9358571, 9358628) 2021-10-25 09:33:17.037 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9362994, 'FBtr0344365_exon_5') contains intron (9358571, 9358628) 2021-10-25 09:33:17.038 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9362994, 'FBtr0344366_exon_6') contains intron (9358571, 9358628) 2021-10-25 09:33:17.039 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9341866, 9342491, 'FBtr0344368_exon_1') contains intron (9341925, 9342219) 2021-10-25 09:33:17.039 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9359189, 'FBtr0344368_exon_5') contains intron (9358571, 9358628) 2021-10-25 09:33:17.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9359189, 'FBtr0344369_exon_4') contains intron (9358571, 9358628) 2021-10-25 09:33:17.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9358255, 9359189, 'FBtr0344370_exon_4') contains intron (9358571, 9358628) 2021-10-25 09:33:17.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344363_exon_1', 'FBtr0344363_exon_6', 'FBtr0344364_exon_5', 'FBtr0344365_exon_5', 'FBtr0344366_exon_6', 'FBtr0344368_exon_1', 'FBtr0344368_exon_5', 'FBtr0344369_exon_4', 'FBtr0344370_exon_4'] 2021-10-25 09:33:17.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035563: ['FBtr0073319'] 2021-10-25 09:33:17.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035563 has a single transcript. 2021-10-25 09:33:17.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032057: ['FBtr0079753'] 2021-10-25 09:33:17.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032057 has a single transcript. 2021-10-25 09:33:17.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035567: ['FBtr0073367'] 2021-10-25 09:33:17.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035567 has a single transcript. 2021-10-25 09:33:17.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032058: ['FBtr0079751'] 2021-10-25 09:33:17.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032058 has a single transcript. 2021-10-25 09:33:17.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22544557, 22544614), (22544694, 22544757), (22545059, 22545117), (22545470, 22545684), (22545783, 22546711), (22545783, 22545875), (22546031, 22546086), (22547123, 22547383), (22547123, 22547658)] 2021-10-25 09:33:17.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035568: ['FBtr0073366'] 2021-10-25 09:33:17.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032059: ['FBtr0079750'] 2021-10-25 09:33:17.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035568 has a single transcript. 2021-10-25 09:33:17.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032059 has a single transcript. 2021-10-25 09:33:17.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259979: ['FBtr0086038', 'FBtr0345358'] 2021-10-25 09:33:17.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035569: ['FBtr0073365'] 2021-10-25 09:33:17.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035569 has a single transcript. 2021-10-25 09:33:17.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032061: ['FBtr0079731', 'FBtr0339543'] 2021-10-25 09:33:17.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035570: ['FBtr0073364'] 2021-10-25 09:33:17.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035570 has a single transcript. 2021-10-25 09:33:17.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035571: ['FBtr0073363', 'FBtr0332742'] 2021-10-25 09:33:17.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5698008, 5698455), (5699224, 5699285), (5699353, 5699414), (5699679, 5699736), (5699988, 5700042)] 2021-10-25 09:33:17.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8706534, 8706597)] 2021-10-25 09:33:17.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.123 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10858686, 10870040), (10859054, 10870040), (10870593, 10870717), (10870879, 10871329), (10872099, 10872158), (10872277, 10872344), (10872477, 10872544), (10872758, 10872833), (10873576, 10873644), (10873774, 10873877), (10874264, 10874335)] 2021-10-25 09:33:17.124 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4753370, 4753543), (4753370, 4753552)] 2021-10-25 09:33:17.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032065: ['FBtr0079732'] 2021-10-25 09:33:17.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032065 has a single transcript. 2021-10-25 09:33:17.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032066: ['FBtr0079744', 'FBtr0340230'] 2021-10-25 09:33:17.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259982: ['FBtr0080708', 'FBtr0310430'] 2021-10-25 09:33:17.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035572: ['FBtr0073347'] 2021-10-25 09:33:17.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035572 has a single transcript. 2021-10-25 09:33:17.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035574: ['FBtr0073345', 'FBtr0332738'] 2021-10-25 09:33:17.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026162: ['FBtr0081622'] 2021-10-25 09:33:17.229 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026162 has a single transcript. 2021-10-25 09:33:17.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8766596, 8766659), (8767569, 8767626), (8768097, 8768159), (8768530, 8768588)] 2021-10-25 09:33:17.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15256697, 15256748)] 2021-10-25 09:33:17.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026163: ['FBtr0081661'] 2021-10-25 09:33:17.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026163 has a single transcript. 2021-10-25 09:33:17.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026164: ['FBtr0081623'] 2021-10-25 09:33:17.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026164 has a single transcript. 2021-10-25 09:33:17.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4693405, 4707616), (4707650, 4732871), (4732922, 4751963), (4752040, 4764521), (4752040, 4753250), (4753381, 4764521), (4764623, 4764886), (4767056, 4789121), (4792153, 4792216), (4792612, 4793920), (4794148, 4795800)] 2021-10-25 09:33:17.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026169: ['FBtr0072259'] 2021-10-25 09:33:17.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026169 has a single transcript. 2021-10-25 09:33:17.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026174: ['FBtr0074796'] 2021-10-25 09:33:17.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026174 has a single transcript. 2021-10-25 09:33:17.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032067: ['FBtr0302992'] 2021-10-25 09:33:17.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032067 has a single transcript. 2021-10-25 09:33:17.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038986: ['FBtr0084281'] 2021-10-25 09:33:17.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038986 has a single transcript. 2021-10-25 09:33:17.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259984: ['FBtr0080509', 'FBtr0080510', 'FBtr0100660', 'FBtr0301412', 'FBtr0342903'] 2021-10-25 09:33:17.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026175: ['FBtr0074797'] 2021-10-25 09:33:17.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026175 has a single transcript. 2021-10-25 09:33:17.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032068: ['FBtr0079742', 'FBtr0345752'] 2021-10-25 09:33:17.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038989: ['FBtr0084266'] 2021-10-25 09:33:17.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038989 has a single transcript. 2021-10-25 09:33:17.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026176: ['FBtr0088020'] 2021-10-25 09:33:17.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026176 has a single transcript. 2021-10-25 09:33:17.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038993: ['FBtr0084269'] 2021-10-25 09:33:17.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038993 has a single transcript. 2021-10-25 09:33:17.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026179: ['FBtr0111038', 'FBtr0078289', 'FBtr0078290', 'FBtr0301602'] 2021-10-25 09:33:17.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035575: ['FBtr0073362'] 2021-10-25 09:33:17.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035575 has a single transcript. 2021-10-25 09:33:17.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039002: ['FBtr0084301'] 2021-10-25 09:33:17.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039002 has a single transcript. 2021-10-25 09:33:17.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035577: ['FBtr0073358', 'FBtr0332744'] 2021-10-25 09:33:17.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039003: ['FBtr0084334', 'FBtr0302856'] 2021-10-25 09:33:17.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8774185, 8774245), (8775089, 8775152), (8775623, 8775682), (8776053, 8776115)] 2021-10-25 09:33:17.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4832177, 4832254), (4833331, 4833571), (4833505, 4833571)] 2021-10-25 09:33:17.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22688400, 22688452), (22690014, 22690074), (22690017, 22690074), (22690173, 22690232)] 2021-10-25 09:33:17.424 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.424 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3176685, 3244734), (3176685, 3189533), (3189811, 3245072), (3190576, 3245072), (3190576, 3244734), (3244854, 3245072), (3246195, 3246294), (3246685, 3321040), (3256211, 3258613), (3256211, 3258610), (3256211, 3256286), (3256317, 3258610), (3258878, 3279946), (3281155, 3293599), (3281155, 3321040), (3290291, 3291113), (3291871, 3321040), (3291877, 3321040), (3295383, 3313499), (3295453, 3321040), (3314608, 3321040), (3321217, 3332441), (3321217, 3325926), (3325965, 3332441), (3329844, 3332441), (3332546, 3334144), (3332546, 3334150), (3334331, 3334554), (3334648, 3337241), (3337582, 3337688), (3337953, 3338025), (3338140, 3338214), (3338377, 3338447), (3338816, 3338969)] 2021-10-25 09:33:17.442 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.443 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032069: ['FBtr0079741'] 2021-10-25 09:33:17.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032069 has a single transcript. 2021-10-25 09:33:17.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13550293, 13551141), (13550420, 13551141), (13551666, 13558799), (13558832, 13609790), (13609987, 13610055), (13610578, 13630705), (13631184, 13633393), (13633540, 13634018), (13634179, 13634238), (13634473, 13634543), (13635590, 13635648), (13636001, 13637287), (13636213, 13637287), (13636213, 13636383), (13636843, 13637287)] 2021-10-25 09:33:17.450 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13635648, 13636995, 'FBtr0342903_exon_11') contains intron (13636213, 13636383) 2021-10-25 09:33:17.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342903_exon_11'] 2021-10-25 09:33:17.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032072: ['FBtr0079738'] 2021-10-25 09:33:17.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032072 has a single transcript. 2021-10-25 09:33:17.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052266: ['FBtr0073147'] 2021-10-25 09:33:17.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052266 has a single transcript. 2021-10-25 09:33:17.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032074: ['FBtr0079754', 'FBtr0300289', 'FBtr0340261'] 2021-10-25 09:33:17.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266411: ['FBtr0344373', 'FBtr0344374', 'FBtr0344375', 'FBtr0344376'] 2021-10-25 09:33:17.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21035301, 21068713), (21048793, 21068713), (21059071, 21063990), (21064701, 21068713), (21068178, 21068713), (21069265, 21070619), (21071062, 21071851), (21073152, 21073213), (21074051, 21074215)] 2021-10-25 09:33:17.467 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.467 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052267: ['FBtr0073142'] 2021-10-25 09:33:17.468 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052267 has a single transcript. 2021-10-25 09:33:17.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052268: ['FBtr0073080'] 2021-10-25 09:33:17.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052268 has a single transcript. 2021-10-25 09:33:17.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035578: ['FBtr0308821', 'FBtr0308822', 'FBtr0306799'] 2021-10-25 09:33:17.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052269: ['FBtr0100678', 'FBtr0332871'] 2021-10-25 09:33:17.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039004: ['FBtr0084302'] 2021-10-25 09:33:17.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039004 has a single transcript. 2021-10-25 09:33:17.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039006: ['FBtr0084304'] 2021-10-25 09:33:17.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039006 has a single transcript. 2021-10-25 09:33:17.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039007: ['FBtr0084333', 'FBtr0335007'] 2021-10-25 09:33:17.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8934018, 8934967), (8934300, 8934967), (8935058, 8935151), (8935754, 8935882)] 2021-10-25 09:33:17.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:17.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30059127, 30067074), (30063538, 30067074), (30067262, 30067323), (30067553, 30067612), (30067834, 30067897), (30068064, 30068313), (30068420, 30082179), (30082321, 30104102), (30082321, 30120128), (30099918, 30104102), (30104809, 30109294), (30109782, 30109849), (30110618, 30111681), (30112352, 30120128)] 2021-10-25 09:33:17.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22701050, 22701103), (22701167, 22701368)] 2021-10-25 09:33:17.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4838447, 4839777), (4838447, 4838562), (4838838, 4839777), (4838838, 4838923)] 2021-10-25 09:33:17.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.562 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052270: ['FBtr0100421'] 2021-10-25 09:33:17.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052270 has a single transcript. 2021-10-25 09:33:17.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039008: ['FBtr0084305', 'FBtr0347565'] 2021-10-25 09:33:17.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052271: ['FBtr0073105'] 2021-10-25 09:33:17.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052271 has a single transcript. 2021-10-25 09:33:17.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052272: ['FBtr0073125'] 2021-10-25 09:33:17.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052272 has a single transcript. 2021-10-25 09:33:17.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052273: ['FBtr0073121'] 2021-10-25 09:33:17.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052273 has a single transcript. 2021-10-25 09:33:17.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052274: ['FBtr0073081'] 2021-10-25 09:33:17.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052274 has a single transcript. 2021-10-25 09:33:17.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052277: ['FBtr0073103'] 2021-10-25 09:33:17.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052277 has a single transcript. 2021-10-25 09:33:17.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032075: ['FBtr0079755', 'FBtr0079756', 'FBtr0273420'] 2021-10-25 09:33:17.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052278: ['FBtr0073033'] 2021-10-25 09:33:17.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052278 has a single transcript. 2021-10-25 09:33:17.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052279: ['FBtr0073059'] 2021-10-25 09:33:17.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052279 has a single transcript. 2021-10-25 09:33:17.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026181: ['FBtr0074286', 'FBtr0340151', 'FBtr0340152', 'FBtr0340153'] 2021-10-25 09:33:17.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052280: ['FBtr0073030', 'FBtr0073031', 'FBtr0073032', 'FBtr0344220'] 2021-10-25 09:33:17.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259985: ['FBtr0339582', 'FBtr0339583', 'FBtr0088024', 'FBtr0088025'] 2021-10-25 09:33:17.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035581: ['FBtr0289982', 'FBtr0289983'] 2021-10-25 09:33:17.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8937405, 8937519), (8937448, 8937519), (8937631, 8938568), (8938757, 8938856), (8939027, 8939115)] 2021-10-25 09:33:17.715 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8937389, 8937631, 'FBtr0273420_exon_1') contains intron (8937405, 8937519) 2021-10-25 09:33:17.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273420_exon_1'] 2021-10-25 09:33:17.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266412: ['FBtr0344393'] 2021-10-25 09:33:17.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266412 has a single transcript. 2021-10-25 09:33:17.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266413: ['FBtr0344394', 'FBtr0344395'] 2021-10-25 09:33:17.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16624078, 16626569), (16626247, 16626569), (16626794, 16626860), (16626966, 16627034), (16627228, 16627300), (16627467, 16627595), (16627494, 16627595), (16627870, 16627933), (16630562, 16632444), (16632701, 16632767), (16632913, 16636221), (16632913, 16635539), (16636361, 16636427)] 2021-10-25 09:33:17.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4861679, 4861736), (4861940, 4863291), (4863333, 4863408), (4863678, 4863731), (4863898, 4863958), (4864059, 4864119), (4864267, 4865064), (4865181, 4865892), (4866059, 4866122), (4866414, 4866466), (4866886, 4866942), (4867108, 4867168), (4867383, 4868470), (4868661, 4868888), (4869073, 4870143), (4870261, 4870329), (4870477, 4870622), (4870780, 4871094), (4871161, 4872110), (4873001, 4873079), (4873184, 4873247), (4873418, 4873760), (4873908, 4874280), (4874379, 4874447), (4874562, 4875738), (4875907, 4879017), (4879211, 4880003), (4880206, 4881499), (4881687, 4882021), (4882192, 4882413), (4883619, 4883684), (4883828, 4883952), (4884135, 4884678), (4884884, 4884951), (4885266, 4885337), (4885569, 4886852), (4886978, 4887325), (4888710, 4888777), (4888925, 4889138), (4889349, 4889405), (4889540, 4889612), (4889785, 4890462), (4890630, 4891044), (4891604, 4891738), (4891913, 4891995), (4892168, 4892400), (4892883, 4892961), (4893141, 4893197), (4893357, 4893412), (4893822, 4894439), (4894650, 4894967)] 2021-10-25 09:33:17.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3165221, 3167941), (3165254, 3167941), (3165389, 3167941), (3165703, 3167941), (3168265, 3168334)] 2021-10-25 09:33:17.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12026031, 12026091), (12026572, 12026722), (12026599, 12026722), (12026985, 12027041), (12027151, 12027222), (12027157, 12027222)] 2021-10-25 09:33:17.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9632341, 9632446)] 2021-10-25 09:33:17.809 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9632034, 9633076, 'FBtr0344394_exon_1') contains intron (9632341, 9632446) 2021-10-25 09:33:17.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344394_exon_1'] 2021-10-25 09:33:17.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22702290, 22702918), (22703039, 22703253), (22703592, 22703651), (22703852, 22703908), (22704022, 22704092), (22704025, 22704092)] 2021-10-25 09:33:17.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.821 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035582: ['FBtr0073352'] 2021-10-25 09:33:17.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035582 has a single transcript. 2021-10-25 09:33:17.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032076: ['FBtr0100481', 'FBtr0299780', 'FBtr0340263'] 2021-10-25 09:33:17.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035583: ['FBtr0073353'] 2021-10-25 09:33:17.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035583 has a single transcript. 2021-10-25 09:33:17.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035584: ['FBtr0073374'] 2021-10-25 09:33:17.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035584 has a single transcript. 2021-10-25 09:33:17.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035585: ['FBtr0073372'] 2021-10-25 09:33:17.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035585 has a single transcript. 2021-10-25 09:33:17.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035586: ['FBtr0077177', 'FBtr0077178'] 2021-10-25 09:33:17.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266414: ['FBtr0344594'] 2021-10-25 09:33:17.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266414 has a single transcript. 2021-10-25 09:33:17.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266415: ['FBtr0344396'] 2021-10-25 09:33:17.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266415 has a single transcript. 2021-10-25 09:33:17.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039009: ['FBtr0345302'] 2021-10-25 09:33:17.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039009 has a single transcript. 2021-10-25 09:33:17.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266416: ['FBtr0344397'] 2021-10-25 09:33:17.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266416 has a single transcript. 2021-10-25 09:33:17.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039010: ['FBtr0084330'] 2021-10-25 09:33:17.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039010 has a single transcript. 2021-10-25 09:33:17.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266417: ['FBtr0344398', 'FBtr0344399', 'FBtr0344400', 'FBtr0344401'] 2021-10-25 09:33:17.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039013: ['FBtr0084326'] 2021-10-25 09:33:17.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039013 has a single transcript. 2021-10-25 09:33:17.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8940197, 8940254), (8940655, 8940997)] 2021-10-25 09:33:17.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039015: ['FBtr0302204'] 2021-10-25 09:33:17.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039015 has a single transcript. 2021-10-25 09:33:17.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5145135, 5145194), (5145798, 5145872)] 2021-10-25 09:33:17.914 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5145194, 5146063, 'FBtr0077177_exon_1') contains intron (5145798, 5145872) 2021-10-25 09:33:17.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077177_exon_1'] 2021-10-25 09:33:17.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039016: ['FBtr0084324'] 2021-10-25 09:33:17.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039016 has a single transcript. 2021-10-25 09:33:17.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039017: ['FBtr0084308'] 2021-10-25 09:33:17.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039017 has a single transcript. 2021-10-25 09:33:17.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039019: ['FBtr0084309'] 2021-10-25 09:33:17.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039019 has a single transcript. 2021-10-25 09:33:17.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039020: ['FBtr0084322'] 2021-10-25 09:33:17.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039020 has a single transcript. 2021-10-25 09:33:17.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052281: ['FBtr0073034'] 2021-10-25 09:33:17.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052281 has a single transcript. 2021-10-25 09:33:17.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039022: ['FBtr0084319'] 2021-10-25 09:33:17.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026189: ['FBtr0073118', 'FBtr0073119', 'FBtr0073120', 'FBtr0306258', 'FBtr0333895', 'FBtr0337055', 'FBtr0337056'] 2021-10-25 09:33:17.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039022 has a single transcript. 2021-10-25 09:33:17.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259986: ['FBtr0302032', 'FBtr0302033', 'FBtr0332660'] 2021-10-25 09:33:17.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039023: ['FBtr0084318'] 2021-10-25 09:33:17.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039023 has a single transcript. 2021-10-25 09:33:17.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052282: ['FBtr0073061'] 2021-10-25 09:33:17.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052282 has a single transcript. 2021-10-25 09:33:17.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039024: ['FBtr0084317'] 2021-10-25 09:33:17.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039024 has a single transcript. 2021-10-25 09:33:17.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052283: ['FBtr0073060'] 2021-10-25 09:33:17.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052283 has a single transcript. 2021-10-25 09:33:17.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039025: ['FBtr0084311'] 2021-10-25 09:33:17.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039025 has a single transcript. 2021-10-25 09:33:17.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035587: ['FBtr0077167', 'FBtr0344225', 'FBtr0331805'] 2021-10-25 09:33:17.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052284: ['FBtr0073037'] 2021-10-25 09:33:17.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052284 has a single transcript. 2021-10-25 09:33:17.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039026: ['FBtr0084312', 'FBtr0113270', 'FBtr0113271', 'FBtr0310037', 'FBtr0310038', 'FBtr0344297'] 2021-10-25 09:33:17.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052285: ['FBtr0073021'] 2021-10-25 09:33:17.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052285 has a single transcript. 2021-10-25 09:33:17.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16355367, 16355633), (16356036, 16356090), (16356036, 16356304), (16356036, 16359298)] 2021-10-25 09:33:17.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:17.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:17.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052286: ['FBtr0073022'] 2021-10-25 09:33:17.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052286 has a single transcript. 2021-10-25 09:33:18.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052287: ['FBtr0073020'] 2021-10-25 09:33:18.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052287 has a single transcript. 2021-10-25 09:33:18.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052288: ['FBtr0073018'] 2021-10-25 09:33:18.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052288 has a single transcript. 2021-10-25 09:33:18.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032077: ['FBtr0079791', 'FBtr0340262'] 2021-10-25 09:33:18.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052289: ['FBtr0073019'] 2021-10-25 09:33:18.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052289 has a single transcript. 2021-10-25 09:33:18.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052296: ['FBtr0344569', 'FBtr0333444', 'FBtr0306331'] 2021-10-25 09:33:18.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4154084, 4154169), (4154084, 4154165), (4154245, 4154366), (4154458, 4155238), (4156113, 4156223), (4156496, 4160330)] 2021-10-25 09:33:18.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5142427, 5143072), (5143262, 5143323), (5143265, 5143323), (5143497, 5143562), (5144021, 5144107)] 2021-10-25 09:33:18.045 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4153617, 4154245, 'FBtr0302032_exon_5') contains intron (4154084, 4154169) 2021-10-25 09:33:18.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5143562, 5144317, 'FBtr0077167_exon_4') contains intron (5144021, 5144107) 2021-10-25 09:33:18.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5143562, 5144317, 'FBtr0331805_exon_4') contains intron (5144021, 5144107) 2021-10-25 09:33:18.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077167_exon_4', 'FBtr0331805_exon_4'] 2021-10-25 09:33:18.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302032_exon_5'] 2021-10-25 09:33:18.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8942452, 8942508), (8942655, 8942826), (8943071, 8943128)] 2021-10-25 09:33:18.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2724058, 2724676), (2724742, 2728419), (2728560, 2728644), (2729469, 2734421), (2729469, 2766257), (2729469, 2761622)] 2021-10-25 09:33:18.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032078: ['FBtr0079788', 'FBtr0079789', 'FBtr0079790'] 2021-10-25 09:33:18.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22751366, 22766610), (22755268, 22766610), (22766726, 22787005), (22782158, 22784466), (22785405, 22787005), (22785423, 22787005), (22787832, 22787967), (22788517, 22788578), (22788768, 22789525), (22788768, 22789492), (22792000, 22792389), (22792000, 22792260), (22792000, 22792257), (22792599, 22792657)] 2021-10-25 09:33:18.135 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22787005, 22788517, 'FBtr0084312_exon_3') contains intron (22787832, 22787967) 2021-10-25 09:33:18.136 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22787005, 22788517, 'FBtr0113270_exon_3') contains intron (22787832, 22787967) 2021-10-25 09:33:18.137 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22787005, 22788517, 'FBtr0113271_exon_3') contains intron (22787832, 22787967) 2021-10-25 09:33:18.138 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22787005, 22788517, 'FBtr0310037_exon_3') contains intron (22787832, 22787967) 2021-10-25 09:33:18.139 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22787005, 22788517, 'FBtr0344297_exon_3') contains intron (22787832, 22787967) 2021-10-25 09:33:18.139 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084312_exon_3', 'FBtr0113270_exon_3', 'FBtr0113271_exon_3', 'FBtr0310037_exon_3', 'FBtr0344297_exon_3'] 2021-10-25 09:33:18.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3116031, 3117082), (3117256, 3117833), (3117256, 3117345), (3117405, 3117833), (3117973, 3118033), (3118979, 3119042), (3119152, 3119212), (3119548, 3119603), (3119734, 3119798), (3119963, 3120026), (3120214, 3120271), (3120400, 3120458), (3120606, 3120667), (3121199, 3126866), (3121199, 3127652), (3121199, 3123017), (3127025, 3127652)] 2021-10-25 09:33:18.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266418: ['FBtr0344403', 'FBtr0344404', 'FBtr0344405', 'FBtr0344406', 'FBtr0344407', 'FBtr0344408', 'FBtr0344409'] 2021-10-25 09:33:18.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035588: ['FBtr0077179'] 2021-10-25 09:33:18.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035588 has a single transcript. 2021-10-25 09:33:18.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259989: ['FBtr0300437', 'FBtr0346518'] 2021-10-25 09:33:18.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035589: ['FBtr0077166'] 2021-10-25 09:33:18.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035589 has a single transcript. 2021-10-25 09:33:18.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035590: ['FBtr0077180'] 2021-10-25 09:33:18.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035590 has a single transcript. 2021-10-25 09:33:18.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035591: ['FBtr0077165'] 2021-10-25 09:33:18.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035591 has a single transcript. 2021-10-25 09:33:18.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035592: ['FBtr0077181'] 2021-10-25 09:33:18.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035592 has a single transcript. 2021-10-25 09:33:18.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8944167, 8944232), (8945122, 8945357), (8945534, 8946462), (8945534, 8950769), (8945534, 8950977)] 2021-10-25 09:33:18.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035593: ['FBtr0077164', 'FBtr0330151', 'FBtr0331804'] 2021-10-25 09:33:18.217 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:18.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.218 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052298: ['FBtr0299807'] 2021-10-25 09:33:18.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052298 has a single transcript. 2021-10-25 09:33:18.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000482: ['FBtr0070269'] 2021-10-25 09:33:18.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000482 has a single transcript. 2021-10-25 09:33:18.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052299: ['FBtr0072898', 'FBtr0299808'] 2021-10-25 09:33:18.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000489: ['FBtr0075528', 'FBtr0075529'] 2021-10-25 09:33:18.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5133939, 5134345)] 2021-10-25 09:33:18.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15926336, 15927064), (15927142, 15927735), (15927917, 15927977), (15928223, 15928288), (15928398, 15928759), (15928928, 15946907), (15947579, 15952101), (15947579, 15954524), (15954587, 15954650)] 2021-10-25 09:33:18.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.288 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077164': ['FBtr0330151']} 2021-10-25 09:33:18.289 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330151']] 2021-10-25 09:33:18.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2389840, 2389900), (2390185, 2390268), (2390423, 2390482)] 2021-10-25 09:33:18.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259990: ['FBtr0300439'] 2021-10-25 09:33:18.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259990 has a single transcript. 2021-10-25 09:33:18.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032079: ['FBtr0079787', 'FBtr0113029', 'FBtr0303885'] 2021-10-25 09:33:18.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259991: ['FBtr0300440'] 2021-10-25 09:33:18.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259991 has a single transcript. 2021-10-25 09:33:18.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259992: ['FBtr0300441', 'FBtr0310656', 'FBtr0304002'] 2021-10-25 09:33:18.327 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22639910, 22652157), (22652558, 22656873), (22657079, 22658020), (22658462, 22658722), (22659049, 22664870), (22665271, 22677592), (22665271, 22675947), (22667038, 22667979), (22667042, 22667979), (22667078, 22667979), (22668042, 22676908), (22668042, 22675947), (22674835, 22676908), (22676198, 22676908), (22677463, 22677592), (22677671, 22677735), (22677839, 22677899), (22678037, 22678103), (22678328, 22678565), (22678772, 22678829), (22679040, 22679103)] 2021-10-25 09:33:18.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035594: ['FBtr0077162'] 2021-10-25 09:33:18.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035594 has a single transcript. 2021-10-25 09:33:18.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035598: ['FBtr0077171'] 2021-10-25 09:33:18.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035598 has a single transcript. 2021-10-25 09:33:18.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000490: ['FBtr0077772', 'FBtr0077773', 'FBtr0077775', 'FBtr0077771'] 2021-10-25 09:33:18.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052301: ['FBtr0301320', 'FBtr0301321', 'FBtr0332663'] 2021-10-25 09:33:18.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035600: ['FBtr0077144', 'FBtr0306086'] 2021-10-25 09:33:18.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8955586, 8957517), (8955586, 8955681), (8955586, 8958877)] 2021-10-25 09:33:18.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039027: ['FBtr0084313', 'FBtr0339137', 'FBtr0345272'] 2021-10-25 09:33:18.395 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8654135, 8654589), (8654135, 8654465)] 2021-10-25 09:33:18.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5360411, 5360691), (5360739, 5360876), (5361025, 5361492), (5361625, 5361694), (5361988, 5362102)] 2021-10-25 09:33:18.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.422 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2244610, 2244665), (2244806, 2244862), (2245013, 2245072), (2245410, 2245461), (2245592, 2245645), (2246587, 2246653), (2246900, 2246953), (2246900, 2246969), (2247043, 2247104), (2247373, 2247428), (2247832, 2247889), (2248093, 2248145)] 2021-10-25 09:33:18.423 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2244477, 2244806, 'FBtr0301320_exon_1') contains intron (2244610, 2244665) 2021-10-25 09:33:18.424 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301320_exon_1'] 2021-10-25 09:33:18.424 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22804373, 22804776), (22804373, 22804779)] 2021-10-25 09:33:18.452 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2429050, 2455056), (2450325, 2455056), (2452414, 2455056), (2454908, 2455056), (2455938, 2457661)] 2021-10-25 09:33:18.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026190: ['FBtr0085689'] 2021-10-25 09:33:18.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026190 has a single transcript. 2021-10-25 09:33:18.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026192: ['FBtr0074455', 'FBtr0074456'] 2021-10-25 09:33:18.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035601: ['FBtr0077155', 'FBtr0077156', 'FBtr0345026'] 2021-10-25 09:33:18.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032080: ['FBtr0079786', 'FBtr0332188'] 2021-10-25 09:33:18.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259993: ['FBtr0300446'] 2021-10-25 09:33:18.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259993 has a single transcript. 2021-10-25 09:33:18.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17703725, 17704371), (17704600, 17704667)] 2021-10-25 09:33:18.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052302: ['FBtr0072881'] 2021-10-25 09:33:18.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052302 has a single transcript. 2021-10-25 09:33:18.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259994: ['FBtr0300465', 'FBtr0300466', 'FBtr0310285', 'FBtr0310286', 'FBtr0336689', 'FBtr0336690'] 2021-10-25 09:33:18.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052303: ['FBtr0072882'] 2021-10-25 09:33:18.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052303 has a single transcript. 2021-10-25 09:33:18.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8961905, 8961962)] 2021-10-25 09:33:18.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8960284, 8962354, 'FBtr0079786_exon_1') contains intron (8961905, 8961962) 2021-10-25 09:33:18.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079786_exon_1'] 2021-10-25 09:33:18.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052304: ['FBtr0072880'] 2021-10-25 09:33:18.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5364015, 5364083), (5364209, 5364942), (5365085, 5366128), (5365085, 5365353)] 2021-10-25 09:33:18.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052304 has a single transcript. 2021-10-25 09:33:18.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052305: ['FBtr0301322'] 2021-10-25 09:33:18.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052305 has a single transcript. 2021-10-25 09:33:18.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039028: ['FBtr0339139'] 2021-10-25 09:33:18.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039028 has a single transcript. 2021-10-25 09:33:18.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052311: ['FBtr0332114', 'FBtr0332115', 'FBtr0332116', 'FBtr0332118', 'FBtr0332119', 'FBtr0332120'] 2021-10-25 09:33:18.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039029: ['FBtr0084314', 'FBtr0339138'] 2021-10-25 09:33:18.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026196: ['FBtr0079369'] 2021-10-25 09:33:18.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026196 has a single transcript. 2021-10-25 09:33:18.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026197: ['FBtr0445670'] 2021-10-25 09:33:18.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026197 has a single transcript. 2021-10-25 09:33:18.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026199: ['FBtr0089092', 'FBtr0089094', 'FBtr0089095'] 2021-10-25 09:33:18.615 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22844687, 22844743)] 2021-10-25 09:33:18.616 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032082: ['FBtr0079759', 'FBtr0332186', 'FBtr0332187'] 2021-10-25 09:33:18.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000492: ['FBtr0085441'] 2021-10-25 09:33:18.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000492 has a single transcript. 2021-10-25 09:33:18.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000499: ['FBtr0073454'] 2021-10-25 09:33:18.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000499 has a single transcript. 2021-10-25 09:33:18.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266419: ['FBtr0344413'] 2021-10-25 09:33:18.648 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266419 has a single transcript. 2021-10-25 09:33:18.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000500: ['FBtr0078989'] 2021-10-25 09:33:18.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000500 has a single transcript. 2021-10-25 09:33:18.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266420: ['FBtr0086768'] 2021-10-25 09:33:18.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035603: ['FBtr0077154'] 2021-10-25 09:33:18.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266420 has a single transcript. 2021-10-25 09:33:18.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035603 has a single transcript. 2021-10-25 09:33:18.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039030: ['FBtr0084338'] 2021-10-25 09:33:18.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039030 has a single transcript. 2021-10-25 09:33:18.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035604: ['FBtr0077153'] 2021-10-25 09:33:18.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035604 has a single transcript. 2021-10-25 09:33:18.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000504: ['FBtr0081759', 'FBtr0081760', 'FBtr0081761', 'FBtr0330073', 'FBtr0330074', 'FBtr0339710'] 2021-10-25 09:33:18.669 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(692359, 692424), (692843, 693380), (694416, 695213), (694416, 695696), (695337, 695696)] 2021-10-25 09:33:18.670 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (695213, 696055, 'FBtr0089094_exon_1') contains intron (695337, 695696) 2021-10-25 09:33:18.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089094_exon_1'] 2021-10-25 09:33:18.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266421: ['FBtr0073535', 'FBtr0343586'] 2021-10-25 09:33:18.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8968009, 8968078), (8968376, 8968772)] 2021-10-25 09:33:18.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035607: ['FBtr0333613'] 2021-10-25 09:33:18.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035607 has a single transcript. 2021-10-25 09:33:18.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039031: ['FBtr0084340', 'FBtr0339164'] 2021-10-25 09:33:18.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035608: ['FBtr0077152'] 2021-10-25 09:33:18.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035608 has a single transcript. 2021-10-25 09:33:18.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5629024, 5629183), (5629024, 5629384), (5629024, 5629396), (5629745, 5630023), (5631495, 5632189), (5631495, 5633105), (5632207, 5633105), (5633266, 5633353), (5633465, 5633870), (5633465, 5633737), (5633758, 5633870), (5634028, 5634240), (5634425, 5635355), (5634425, 5636221), (5634425, 5641892), (5634425, 5641522), (5634425, 5640917), (5635466, 5641892), (5636578, 5637534), (5640980, 5641892), (5641561, 5641892), (5642026, 5642933), (5643111, 5643395), (5643449, 5647731), (5647976, 5648419), (5648172, 5648419), (5648177, 5648419)] 2021-10-25 09:33:18.686 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035610: ['FBtr0077149'] 2021-10-25 09:33:18.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035610 has a single transcript. 2021-10-25 09:33:18.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035611: ['FBtr0077141', 'FBtr0306593'] 2021-10-25 09:33:18.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:18.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11615446, 11615517)] 2021-10-25 09:33:18.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.731 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2117623, 2118766), (2119129, 2125238), (2122960, 2123299), (2123480, 2123596), (2123679, 2125238), (2123679, 2124181), (2124613, 2125238), (2126670, 2127077), (2126670, 2129053), (2128760, 2129053), (2129229, 2129579), (2129786, 2130792), (2132584, 2134099), (2134260, 2134324), (2135750, 2135862), (2136057, 2136894), (2136057, 2137326), (2136966, 2137326), (2138082, 2138293), (2138470, 2139600), (2139942, 2140057), (2139942, 2140224), (2140105, 2140224), (2141532, 2141589), (2141712, 2149744), (2150281, 2151609)] 2021-10-25 09:33:18.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.743 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5534407, 5534982), (5535270, 5535436), (5535542, 5535612)] 2021-10-25 09:33:18.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032083: ['FBtr0332206', 'FBtr0332207'] 2021-10-25 09:33:18.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039033: ['FBtr0084341'] 2021-10-25 09:33:18.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039033 has a single transcript. 2021-10-25 09:33:18.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266428: ['FBtr0309282', 'FBtr0309283'] 2021-10-25 09:33:18.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026206: ['FBtr0071303', 'FBtr0340341', 'FBtr0333473', 'FBtr0333474', 'FBtr0333475'] 2021-10-25 09:33:18.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039034: ['FBtr0084342'] 2021-10-25 09:33:18.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039034 has a single transcript. 2021-10-25 09:33:18.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039038: ['FBtr0084343'] 2021-10-25 09:33:18.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039038 has a single transcript. 2021-10-25 09:33:18.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039039: ['FBtr0084364', 'FBtr0337069'] 2021-10-25 09:33:18.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7925360, 7930170), (7930687, 7935767), (7935653, 7935767), (7935905, 7959751), (7961122, 7962229), (7961122, 7966462)] 2021-10-25 09:33:18.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.823 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8971196, 8971265), (8971430, 8971500), (8971717, 8971779), (8972083, 8972173), (8972282, 8972354), (8972537, 8972916), (8973059, 8973224), (8973536, 8974909)] 2021-10-25 09:33:18.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8971779, 8972282, 'FBtr0332207_exon_5') contains intron (8972083, 8972173) 2021-10-25 09:33:18.824 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332207_exon_5'] 2021-10-25 09:33:18.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035612: ['FBtr0077137', 'FBtr0077138', 'FBtr0077139', 'FBtr0077140', 'FBtr0113144', 'FBtr0113146', 'FBtr0273231', 'FBtr0273232', 'FBtr0273233', 'FBtr0273234'] 2021-10-25 09:33:18.838 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081759': ['FBtr0330074']} 2021-10-25 09:33:18.838 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330074']] 2021-10-25 09:33:18.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14360641, 14360707)] 2021-10-25 09:33:18.842 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14359284, 14361303, 'FBtr0309283_exon_1') contains intron (14360641, 14360707) 2021-10-25 09:33:18.842 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309283_exon_1'] 2021-10-25 09:33:18.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23022479, 23023759), (23023921, 23024936), (23023921, 23024409)] 2021-10-25 09:33:18.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032084: ['FBtr0079783', 'FBtr0079784'] 2021-10-25 09:33:18.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266429: ['FBtr0070575', 'FBtr0333798'] 2021-10-25 09:33:18.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9163290, 9165681), (9163398, 9165681), (9164334, 9165681), (9166459, 9166519), (9166459, 9166534), (9167032, 9167157), (9169262, 9169465), (9169262, 9169516), (9169985, 9170058), (9170222, 9170303), (9170536, 9170710)] 2021-10-25 09:33:18.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039040: ['FBtr0084362'] 2021-10-25 09:33:18.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039040 has a single transcript. 2021-10-25 09:33:18.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259996: ['FBtr0344577'] 2021-10-25 09:33:18.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259996 has a single transcript. 2021-10-25 09:33:18.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039041: ['FBtr0084344'] 2021-10-25 09:33:18.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039041 has a single transcript. 2021-10-25 09:33:18.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8978357, 8978420), (8978604, 8978666), (8978786, 8978857), (8979083, 8980047), (8980302, 8983889), (8984032, 8984800), (8984032, 8984735)] 2021-10-25 09:33:18.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259998: ['FBtr0081376', 'FBtr0345635'] 2021-10-25 09:33:18.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039042: ['FBtr0084345'] 2021-10-25 09:33:18.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039042 has a single transcript. 2021-10-25 09:33:18.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039043: ['FBtr0084361'] 2021-10-25 09:33:18.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039043 has a single transcript. 2021-10-25 09:33:18.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3574920, 3645303), (3574920, 3632006), (3632055, 3645303), (3645762, 3655580), (3655770, 3655849), (3655945, 3656666), (3656817, 3662159), (3662278, 3663455), (3663531, 3664333), (3664489, 3664560), (3664669, 3664810)] 2021-10-25 09:33:18.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:18.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039044: ['FBtr0084359', 'FBtr0084360', 'FBtr0301765', 'FBtr0345262'] 2021-10-25 09:33:18.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:18.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:18.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000520: ['FBtr0070487'] 2021-10-25 09:33:19.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000520 has a single transcript. 2021-10-25 09:33:19.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032085: ['FBtr0079761', 'FBtr0345450'] 2021-10-25 09:33:19.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000524: ['FBtr0070914'] 2021-10-25 09:33:19.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000524 has a single transcript. 2021-10-25 09:33:19.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052312: ['FBtr0072840'] 2021-10-25 09:33:19.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052312 has a single transcript. 2021-10-25 09:33:19.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266430: ['FBtr0344420'] 2021-10-25 09:33:19.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266430 has a single transcript. 2021-10-25 09:33:19.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000527: ['FBtr0084106'] 2021-10-25 09:33:19.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000527 has a single transcript. 2021-10-25 09:33:19.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052313: ['FBtr0072830', 'FBtr0333398', 'FBtr0333399'] 2021-10-25 09:33:19.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266431: ['FBtr0344419'] 2021-10-25 09:33:19.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266431 has a single transcript. 2021-10-25 09:33:19.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000529: ['FBtr0089320', 'FBtr0343855'] 2021-10-25 09:33:19.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266432: ['FBtr0344422', 'FBtr0344423'] 2021-10-25 09:33:19.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8992384, 8992690), (8992792, 8992849), (8993036, 8993093)] 2021-10-25 09:33:19.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260000: ['FBtr0081375'] 2021-10-25 09:33:19.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260000 has a single transcript. 2021-10-25 09:33:19.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23049987, 23050046), (23050441, 23050503), (23050750, 23050814), (23051124, 23052921), (23051124, 23051189), (23052948, 23053011), (23053048, 23053118), (23053199, 23053356), (23053199, 23053581), (23053905, 23053964)] 2021-10-25 09:33:19.064 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260002: ['FBtr0114326'] 2021-10-25 09:33:19.064 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260002 has a single transcript. 2021-10-25 09:33:19.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19766628, 19767047), (19767350, 19767739), (19768014, 19768486)] 2021-10-25 09:33:19.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.075 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22473221, 22473372), (22473522, 22473582), (22473821, 22473890), (22474065, 22474251), (22474343, 22474413), (22475985, 22476041)] 2021-10-25 09:33:19.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5539261, 5539303), (5539853, 5540175), (5540248, 5540490), (5540559, 5540619), (5540886, 5540951), (5541014, 5541078), (5541210, 5541366), (5541267, 5541333), (5541372, 5542490), (5541372, 5544971), (5543174, 5543236), (5543465, 5543618), (5543947, 5544971), (5545101, 5550783), (5550911, 5551099), (5550911, 5551127)] 2021-10-25 09:33:19.081 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5539853, 'FBtr0077137_exon_10') contains intron (5539261, 5539303) 2021-10-25 09:33:19.081 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5539853, 'FBtr0077138_exon_9') contains intron (5539261, 5539303) 2021-10-25 09:33:19.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.081 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5550783, 5551159, 'FBtr0077138_exon_1') contains intron (5550911, 5551099) 2021-10-25 09:33:19.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.082 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5539853, 'FBtr0077139_exon_13') contains intron (5539261, 5539303) 2021-10-25 09:33:19.082 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5539853, 'FBtr0077140_exon_12') contains intron (5539261, 5539303) 2021-10-25 09:33:19.082 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538410, 5539853, 'FBtr0113144_exon_13') contains intron (5539261, 5539303) 2021-10-25 09:33:19.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5550783, 5551159, 'FBtr0113146_exon_1') contains intron (5550911, 5551099) 2021-10-25 09:33:19.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5540559, 'FBtr0273231_exon_10') contains intron (5539261, 5539303) 2021-10-25 09:33:19.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5550783, 5551159, 'FBtr0273231_exon_1') contains intron (5550911, 5551099) 2021-10-25 09:33:19.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5538631, 5540559, 'FBtr0273232_exon_7') contains intron (5539261, 5539303) 2021-10-25 09:33:19.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5550783, 5551159, 'FBtr0273232_exon_1') contains intron (5550911, 5551099) 2021-10-25 09:33:19.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5539303, 5540559, 'FBtr0273233_exon_7') contains intron (5539853, 5540175) 2021-10-25 09:33:19.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5550783, 5551159, 'FBtr0273233_exon_1') contains intron (5550911, 5551099) 2021-10-25 09:33:19.085 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077137_exon_10', 'FBtr0077138_exon_9', 'FBtr0077138_exon_1', 'FBtr0077139_exon_13', 'FBtr0077140_exon_12', 'FBtr0113144_exon_13', 'FBtr0113146_exon_1', 'FBtr0273231_exon_10', 'FBtr0273231_exon_1', 'FBtr0273232_exon_7', 'FBtr0273232_exon_1', 'FBtr0273233_exon_7', 'FBtr0273233_exon_1'] 2021-10-25 09:33:19.085 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1545103, 1545169), (1545405, 1545473), (1545422, 1545473), (1545605, 1545652), (1545605, 1545655)] 2021-10-25 09:33:19.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260003: ['FBtr0083764', 'FBtr0083765', 'FBtr0083766', 'FBtr0110915', 'FBtr0110916', 'FBtr0110917', 'FBtr0110918', 'FBtr0110919', 'FBtr0334562', 'FBtr0334563', 'FBtr0334564', 'FBtr0334565'] 2021-10-25 09:33:19.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032086: ['FBtr0079762'] 2021-10-25 09:33:19.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032086 has a single transcript. 2021-10-25 09:33:19.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032087: ['FBtr0079765'] 2021-10-25 09:33:19.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032087 has a single transcript. 2021-10-25 09:33:19.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032088: ['FBtr0079766', 'FBtr0309842'] 2021-10-25 09:33:19.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000533: ['FBtr0083083', 'FBtr0334588'] 2021-10-25 09:33:19.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026207: ['FBtr0082668'] 2021-10-25 09:33:19.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026207 has a single transcript. 2021-10-25 09:33:19.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266433: ['FBtr0344421'] 2021-10-25 09:33:19.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266433 has a single transcript. 2021-10-25 09:33:19.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266434: ['FBtr0344425'] 2021-10-25 09:33:19.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266434 has a single transcript. 2021-10-25 09:33:19.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026238: ['FBtr0309846', 'FBtr0309847', 'FBtr0309848', 'FBtr0309849', 'FBtr0309850', 'FBtr0309851', 'FBtr0309852'] 2021-10-25 09:33:19.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266435: ['FBtr0344424'] 2021-10-25 09:33:19.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266435 has a single transcript. 2021-10-25 09:33:19.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266436: ['FBtr0344427'] 2021-10-25 09:33:19.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266436 has a single transcript. 2021-10-25 09:33:19.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266437: ['FBtr0445828'] 2021-10-25 09:33:19.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266437 has a single transcript. 2021-10-25 09:33:19.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266438: ['FBtr0344430'] 2021-10-25 09:33:19.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266438 has a single transcript. 2021-10-25 09:33:19.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15328993, 15329082), (15328993, 15329179), (15329566, 15329630)] 2021-10-25 09:33:19.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266439: ['FBtr0344428', 'FBtr0344429'] 2021-10-25 09:33:19.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9012321, 9012384), (9012561, 9012625)] 2021-10-25 09:33:19.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052318: ['FBtr0072732'] 2021-10-25 09:33:19.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052318 has a single transcript. 2021-10-25 09:33:19.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052319: ['FBtr0072714'] 2021-10-25 09:33:19.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052319 has a single transcript. 2021-10-25 09:33:19.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039045: ['FBtr0084357', 'FBtr0344299'] 2021-10-25 09:33:19.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052320: ['FBtr0339901'] 2021-10-25 09:33:19.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052320 has a single transcript. 2021-10-25 09:33:19.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052324: ['FBtr0072688'] 2021-10-25 09:33:19.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052324 has a single transcript. 2021-10-25 09:33:19.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24412119, 24412177), (24414411, 24414494), (24414783, 24414847)] 2021-10-25 09:33:19.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052328: ['FBtr0072683'] 2021-10-25 09:33:19.235 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052328 has a single transcript. 2021-10-25 09:33:19.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052329: ['FBtr0072684'] 2021-10-25 09:33:19.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052329 has a single transcript. 2021-10-25 09:33:19.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032089: ['FBtr0079779'] 2021-10-25 09:33:19.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032089 has a single transcript. 2021-10-25 09:33:19.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052330: ['FBtr0072682'] 2021-10-25 09:33:19.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052330 has a single transcript. 2021-10-25 09:33:19.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032090: ['FBtr0079778', 'FBtr0339808'] 2021-10-25 09:33:19.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000535: ['FBtr0111009', 'FBtr0073955', 'FBtr0310014', 'FBtr0310015', 'FBtr0310016', 'FBtr0303285', 'FBtr0303286'] 2021-10-25 09:33:19.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052333: ['FBtr0072662', 'FBtr0100256', 'FBtr0331863'] 2021-10-25 09:33:19.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23054628, 23054728), (23054831, 23054887), (23055176, 23055362), (23055723, 23055788), (23055971, 23056041), (23056138, 23056198), (23056326, 23057432), (23056326, 23058883)] 2021-10-25 09:33:19.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266441: ['FBtr0344433', 'FBtr0344434'] 2021-10-25 09:33:19.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9025393, 9031623)] 2021-10-25 09:33:19.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.310 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5117802, 5120762), (5121652, 5121772), (5121652, 5121768), (5121652, 5121736), (5121652, 5128225), (5121652, 5121982), (5121840, 5128225), (5121840, 5121982)] 2021-10-25 09:33:19.311 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5120762, 5121840, 'FBtr0309851_exon_2') contains intron (5121652, 5121772) 2021-10-25 09:33:19.311 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309851_exon_2'] 2021-10-25 09:33:19.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039048: ['FBtr0303508'] 2021-10-25 09:33:19.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039048 has a single transcript. 2021-10-25 09:33:19.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1276178, 1283649), (1276294, 1283649), (1283812, 1284787), (1285110, 1287931), (1288238, 1289998), (1288238, 1290285), (1290028, 1290285), (1290473, 1290529), (1293458, 1293517), (1293729, 1293797), (1294038, 1294092)] 2021-10-25 09:33:19.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15106068, 15108615), (15108958, 15109337), (15108958, 15109543), (15109487, 15109543)] 2021-10-25 09:33:19.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039049: ['FBtr0084348', 'FBtr0084349', 'FBtr0344300'] 2021-10-25 09:33:19.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032094: ['FBtr0079767', 'FBtr0340592'] 2021-10-25 09:33:19.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19461465, 19477122), (19463639, 19464499), (19463681, 19464499), (19464846, 19477122), (19477035, 19477122), (19477277, 19477451), (19480916, 19480979), (19481294, 19481356), (19481662, 19481813), (19482316, 19482563), (19482651, 19483903), (19482651, 19485039), (19484944, 19485039), (19485272, 19485608), (19485770, 19485831), (19485991, 19488095), (19487514, 19488095), (19488191, 19488258), (19488391, 19493964), (19494128, 19494212), (19494318, 19505867), (19494318, 19506247), (19505393, 19506247), (19505936, 19506247), (19506338, 19506408), (19506529, 19506594), (19506728, 19506840), (19506934, 19506998), (19507079, 19554817), (19509390, 19524458), (19527234, 19554817), (19554990, 19558413), (19558564, 19560147), (19560271, 19562668), (19562826, 19571020), (19562826, 19590123), (19569271, 19585240), (19569672, 19585240), (19571071, 19590123), (19586514, 19590123), (19590383, 19590444), (19590645, 19590758), (19590892, 19590957), (19591316, 19591657), (19592041, 19592108), (19592229, 19592329), (19592760, 19592822), (19593123, 19594499), (19593123, 19593795), (19594098, 19594368), (19594098, 19594499), (19594398, 19594499)] 2021-10-25 09:33:19.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266442: ['FBtr0344436'] 2021-10-25 09:33:19.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266442 has a single transcript. 2021-10-25 09:33:19.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9077152, 9077221)] 2021-10-25 09:33:19.407 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9077120, 9077988, 'FBtr0340592_exon_1') contains intron (9077152, 9077221) 2021-10-25 09:33:19.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340592_exon_1'] 2021-10-25 09:33:19.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266443: ['FBtr0344435'] 2021-10-25 09:33:19.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266443 has a single transcript. 2021-10-25 09:33:19.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23091756, 23091862), (23091961, 23092055), (23092547, 23092600), (23093018, 23093081), (23093433, 23093500), (23093775, 23093829), (23094321, 23094379), (23094794, 23094849)] 2021-10-25 09:33:19.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266445: ['FBtr0344439'] 2021-10-25 09:33:19.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266445 has a single transcript. 2021-10-25 09:33:19.426 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14955549, 14955864), (14956129, 14971098), (14971798, 14986272), (14986393, 14990319), (14986399, 14990319), (14990432, 14991345), (14990432, 14992719), (14991396, 14992719), (14992851, 14993424), (14992851, 14993445), (14992851, 14993451), (14993558, 14993622), (14993766, 14995792), (14995889, 14995945), (14996292, 14996354), (14996510, 14996633), (14996706, 14997933), (14998133, 14999857), (15000110, 15000412), (15000828, 15002114), (15000828, 15004034), (15000828, 15002111), (15002402, 15004034)] 2021-10-25 09:33:19.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266446: ['FBtr0344440', 'FBtr0344441', 'FBtr0344442', 'FBtr0344443'] 2021-10-25 09:33:19.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052343: ['FBtr0309236', 'FBtr0332840', 'FBtr0299831', 'FBtr0299838'] 2021-10-25 09:33:19.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032095: ['FBtr0079768'] 2021-10-25 09:33:19.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032095 has a single transcript. 2021-10-25 09:33:19.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032096: ['FBtr0079770'] 2021-10-25 09:33:19.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032096 has a single transcript. 2021-10-25 09:33:19.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032100: ['FBtr0079773'] 2021-10-25 09:33:19.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032100 has a single transcript. 2021-10-25 09:33:19.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032101: ['FBtr0079774', 'FBtr0330220'] 2021-10-25 09:33:19.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035617: ['FBtr0077085'] 2021-10-25 09:33:19.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035617 has a single transcript. 2021-10-25 09:33:19.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035619: ['FBtr0077129'] 2021-10-25 09:33:19.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035619 has a single transcript. 2021-10-25 09:33:19.521 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10769036, 10769101), (10769303, 10771336), (10770432, 10771037), (10771205, 10771336), (10771467, 10771859), (10771972, 10772112), (10772604, 10773134), (10773161, 10777176)] 2021-10-25 09:33:19.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035620: ['FBtr0077086', 'FBtr0345902'] 2021-10-25 09:33:19.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.523 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039050: ['FBtr0084350', 'FBtr0344301', 'FBtr0337026'] 2021-10-25 09:33:19.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9165842, 9165942), (9165872, 9165942), (9166164, 9166222)] 2021-10-25 09:33:19.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(325694, 325754), (325824, 325879), (325974, 326032), (326358, 326421), (326539, 326703), (326539, 326866), (326724, 326866), (327079, 327134), (327488, 327545), (327677, 327747), (327677, 327798)] 2021-10-25 09:33:19.558 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (327545, 327769, 'FBtr0332840_exon_1') contains intron (327677, 327747) 2021-10-25 09:33:19.559 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (327545, 327769, 'FBtr0299838_exon_1') contains intron (327677, 327747) 2021-10-25 09:33:19.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332840_exon_1', 'FBtr0299838_exon_1'] 2021-10-25 09:33:19.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:19.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032104: ['FBtr0079819', 'FBtr0343928'] 2021-10-25 09:33:19.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23091756, 23091862), (23091961, 23092055), (23092547, 23092600), (23093018, 23093081), (23093433, 23093500), (23093775, 23093829), (23094321, 23094379), (23094794, 23094849)] 2021-10-25 09:33:19.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026239: ['FBtr0089767', 'FBtr0089768', 'FBtr0100317', 'FBtr0343991'] 2021-10-25 09:33:19.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035621: ['FBtr0077128'] 2021-10-25 09:33:19.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035621 has a single transcript. 2021-10-25 09:33:19.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035622: ['FBtr0077127'] 2021-10-25 09:33:19.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035622 has a single transcript. 2021-10-25 09:33:19.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035623: ['FBtr0077088'] 2021-10-25 09:33:19.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035623 has a single transcript. 2021-10-25 09:33:19.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035624: ['FBtr0077126'] 2021-10-25 09:33:19.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035624 has a single transcript. 2021-10-25 09:33:19.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9250686, 9250752)] 2021-10-25 09:33:19.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035625: ['FBtr0077089', 'FBtr0331806', 'FBtr0331807', 'FBtr0331808', 'FBtr0331809', 'FBtr0345593'] 2021-10-25 09:33:19.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266448: ['FBtr0344445'] 2021-10-25 09:33:19.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266448 has a single transcript. 2021-10-25 09:33:19.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266449: ['FBtr0079192', 'FBtr0302212', 'FBtr0343126'] 2021-10-25 09:33:19.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039051: ['FBtr0084351', 'FBtr0337027'] 2021-10-25 09:33:19.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052344: ['FBtr0072576'] 2021-10-25 09:33:19.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052344 has a single transcript. 2021-10-25 09:33:19.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052350: ['FBtr0070046'] 2021-10-25 09:33:19.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052350 has a single transcript. 2021-10-25 09:33:19.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000536: ['FBtr0074214', 'FBtr0074211', 'FBtr0074212', 'FBtr0308617', 'FBtr0308618', 'FBtr0308619', 'FBtr0343519', 'FBtr0343520'] 2021-10-25 09:33:19.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032105: ['FBtr0079817', 'FBtr0079818'] 2021-10-25 09:33:19.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18985115, 19008503), (19008871, 19011560), (19011892, 19013173), (19013449, 19015790), (19013449, 19018022), (19013449, 19020928), (19018483, 19020928)] 2021-10-25 09:33:19.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052351: ['FBtr0076639'] 2021-10-25 09:33:19.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052351 has a single transcript. 2021-10-25 09:33:19.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052354: ['FBtr0076662'] 2021-10-25 09:33:19.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052354 has a single transcript. 2021-10-25 09:33:19.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052357: ['FBtr0075380'] 2021-10-25 09:33:19.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052357 has a single transcript. 2021-10-25 09:33:19.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052358: ['FBtr0076744'] 2021-10-25 09:33:19.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052358 has a single transcript. 2021-10-25 09:33:19.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052359: ['FBtr0076743'] 2021-10-25 09:33:19.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052359 has a single transcript. 2021-10-25 09:33:19.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23095823, 23095882), (23096371, 23096431), (23096849, 23096908)] 2021-10-25 09:33:19.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6071187, 6072413), (6072676, 6072733), (6072983, 6073039), (6073173, 6073236)] 2021-10-25 09:33:19.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052360: ['FBtr0076742'] 2021-10-25 09:33:19.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052360 has a single transcript. 2021-10-25 09:33:19.760 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9251876, 9251941), (9252338, 9252634), (9252350, 9252634)] 2021-10-25 09:33:19.761 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052361: ['FBtr0076741'] 2021-10-25 09:33:19.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052361 has a single transcript. 2021-10-25 09:33:19.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052362: ['FBtr0076740'] 2021-10-25 09:33:19.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052362 has a single transcript. 2021-10-25 09:33:19.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052363: ['FBtr0076739'] 2021-10-25 09:33:19.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052363 has a single transcript. 2021-10-25 09:33:19.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052364: ['FBtr0076720'] 2021-10-25 09:33:19.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052364 has a single transcript. 2021-10-25 09:33:19.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052365: ['FBtr0076746', 'FBtr0339897'] 2021-10-25 09:33:19.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5631481, 5644086), (5636518, 5644086), (5642334, 5644086), (5643715, 5644086), (5644632, 5644734), (5644851, 5645265), (5644851, 5645674), (5645304, 5645674), (5648237, 5648302)] 2021-10-25 09:33:19.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039052: ['FBtr0084352'] 2021-10-25 09:33:19.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039052 has a single transcript. 2021-10-25 09:33:19.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039053: ['FBtr0084353'] 2021-10-25 09:33:19.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039053 has a single transcript. 2021-10-25 09:33:19.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032109: ['FBtr0273186', 'FBtr0336622', 'FBtr0336623', 'FBtr0336624'] 2021-10-25 09:33:19.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039054: ['FBtr0302022', 'FBtr0302023', 'FBtr0337028'] 2021-10-25 09:33:19.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7869103, 7869582), (7870053, 7890038), (7890275, 7893234), (7893572, 7893644)] 2021-10-25 09:33:19.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7869041, 7870053, 'FBtr0339897_exon_1') contains intron (7869103, 7869582) 2021-10-25 09:33:19.857 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339897_exon_1'] 2021-10-25 09:33:19.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266450: ['FBtr0344437', 'FBtr0344438'] 2021-10-25 09:33:19.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026250: ['FBtr0083572', 'FBtr0083573', 'FBtr0343927'] 2021-10-25 09:33:19.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6083740, 6092994), (6092244, 6092994), (6093707, 6093792), (6095153, 6095237)] 2021-10-25 09:33:19.911 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052368: ['FBtr0076749'] 2021-10-25 09:33:19.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052368 has a single transcript. 2021-10-25 09:33:19.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23072728, 23073863), (23074001, 23075005), (23074001, 23075014), (23075401, 23075633), (23075730, 23075796), (23075916, 23075999), (23076214, 23076827), (23076976, 23081348), (23081717, 23081827), (23081930, 23082098), (23082165, 23112206)] 2021-10-25 09:33:19.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16278547, 16280885), (16278547, 16279705), (16278615, 16278693), (16278615, 16280885), (16278615, 16279705), (16278761, 16280885), (16278969, 16279021), (16278969, 16280885), (16279828, 16279908), (16279991, 16280885), (16279991, 16280977), (16281273, 16281438), (16281273, 16283669), (16281503, 16283669), (16284238, 16284311), (16284761, 16285021)] 2021-10-25 09:33:19.916 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16278578, 16278969, 'FBtr0074214_exon_1') contains intron (16278615, 16278693) 2021-10-25 09:33:19.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.917 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16278327, 16281273, 'FBtr0308617_exon_1') contains intron (16278547, 16280885) 2021-10-25 09:33:19.919 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16278327, 16278969, 'FBtr0343520_exon_1') contains intron (16278615, 16278693) 2021-10-25 09:33:19.920 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16279021, 16281273, 'FBtr0343520_exon_2') contains intron (16279828, 16279908) 2021-10-25 09:33:19.920 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074214_exon_1', 'FBtr0308617_exon_1', 'FBtr0343520_exon_1', 'FBtr0343520_exon_2'] 2021-10-25 09:33:19.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052369: ['FBtr0076783', 'FBtr0304992'] 2021-10-25 09:33:19.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9327960, 9328012), (9327960, 9328079), (9328354, 9328412), (9328695, 9328753), (9328992, 9329078), (9329777, 9329930)] 2021-10-25 09:33:19.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9327743, 9328354, 'FBtr0336622_exon_1') contains intron (9327960, 9328012) 2021-10-25 09:33:19.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336622_exon_1'] 2021-10-25 09:33:19.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260004: ['FBtr0084027', 'FBtr0333928'] 2021-10-25 09:33:19.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7778736, 7778797), (7779744, 7779853), (7780445, 7780735), (7780873, 7780931), (7781050, 7803268), (7804707, 7808996)] 2021-10-25 09:33:19.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18274756, 18274866), (18274756, 18274825), (18275141, 18281693)] 2021-10-25 09:33:19.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:19.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:19.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266451: ['FBtr0344444'] 2021-10-25 09:33:19.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266451 has a single transcript. 2021-10-25 09:33:19.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266452: ['FBtr0344431', 'FBtr0344432', 'FBtr0345691'] 2021-10-25 09:33:20.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21166011, 21166071), (21166250, 21166310), (21166817, 21166885), (21167140, 21167585), (21167733, 21167799), (21167957, 21168017)] 2021-10-25 09:33:20.001 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.001 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052370: ['FBtr0076762'] 2021-10-25 09:33:20.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052370 has a single transcript. 2021-10-25 09:33:20.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035626: ['FBtr0077090'] 2021-10-25 09:33:20.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035626 has a single transcript. 2021-10-25 09:33:20.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039055: ['FBtr0084407'] 2021-10-25 09:33:20.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039055 has a single transcript. 2021-10-25 09:33:20.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052371: ['FBtr0076788'] 2021-10-25 09:33:20.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052371 has a single transcript. 2021-10-25 09:33:20.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035627: ['FBtr0077125'] 2021-10-25 09:33:20.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035627 has a single transcript. 2021-10-25 09:33:20.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039056: ['FBtr0084368', 'FBtr0084369'] 2021-10-25 09:33:20.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052373: ['FBtr0076805', 'FBtr0076806', 'FBtr0334059'] 2021-10-25 09:33:20.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035630: ['FBtr0077121', 'FBtr0345606', 'FBtr0345901'] 2021-10-25 09:33:20.062 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15098516, 15110815), (15106068, 15108746), (15108958, 15110815), (15110986, 15111086), (15111588, 15111652)] 2021-10-25 09:33:20.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032110: ['FBtr0079803', 'FBtr0336625'] 2021-10-25 09:33:20.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260005: ['FBtr0081753', 'FBtr0081754', 'FBtr0081755', 'FBtr0339709'] 2021-10-25 09:33:20.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026252: ['FBtr0076685'] 2021-10-25 09:33:20.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026252 has a single transcript. 2021-10-25 09:33:20.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026255: ['FBtr0081476', 'FBtr0110895'] 2021-10-25 09:33:20.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23118841, 23120266), (23120383, 23120460), (23120554, 23120616), (23120781, 23120841), (23120985, 23121336), (23121253, 23121336), (23121632, 23121827), (23121632, 23121806), (23121944, 23122012), (23122171, 23122232), (23123387, 23123442)] 2021-10-25 09:33:20.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:20.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5762524, 5762587), (5762715, 5763047), (5763273, 5763554), (5763776, 5764433), (5764596, 5764658), (5764795, 5765086), (5765184, 5765340)] 2021-10-25 09:33:20.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7650865, 7737112), (7650865, 7756982), (7737199, 7756982), (7756854, 7756982), (7757179, 7757291), (7757587, 7757652), (7757764, 7757827), (7757953, 7758030), (7758621, 7758719), (7758943, 7759008)] 2021-10-25 09:33:20.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21206727, 21206803), (21206731, 21206803), (21206950, 21207098), (21207161, 21207219), (21207423, 21207477), (21207689, 21207747), (21208089, 21208939), (21209371, 21209697), (21210056, 21210110), (21210541, 21210639), (21210541, 21210812), (21210730, 21210812), (21211081, 21211186)] 2021-10-25 09:33:20.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7891484, 7894368), (7891484, 7894261), (7891571, 7894368), (7894630, 7897845), (7896343, 7897845), (7899190, 7899257)] 2021-10-25 09:33:20.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039058: ['FBtr0084401'] 2021-10-25 09:33:20.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039058 has a single transcript. 2021-10-25 09:33:20.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039059: ['FBtr0084400'] 2021-10-25 09:33:20.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039059 has a single transcript. 2021-10-25 09:33:20.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266454: ['FBtr0344450'] 2021-10-25 09:33:20.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266454 has a single transcript. 2021-10-25 09:33:20.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039064: ['FBtr0084390', 'FBtr0110801'] 2021-10-25 09:33:20.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266455: ['FBtr0344451'] 2021-10-25 09:33:20.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266455 has a single transcript. 2021-10-25 09:33:20.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032111: ['FBtr0079805'] 2021-10-25 09:33:20.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032111 has a single transcript. 2021-10-25 09:33:20.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266456: ['FBtr0344456', 'FBtr0344457'] 2021-10-25 09:33:20.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032115: ['FBtr0079813', 'FBtr0303900'] 2021-10-25 09:33:20.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026257: ['FBtr0084556', 'FBtr0084557', 'FBtr0084558', 'FBtr0084559'] 2021-10-25 09:33:20.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23230604, 23230677), (23231049, 23231115), (23231245, 23231301), (23231564, 23231628), (23231771, 23231840), (23233200, 23233261), (23233442, 23233500), (23233709, 23233807), (23233890, 23233997), (23234186, 23236569), (23236710, 23245254), (23236710, 23237157), (23237427, 23239696), (23245759, 23248593)] 2021-10-25 09:33:20.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035631: ['FBtr0077098'] 2021-10-25 09:33:20.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035631 has a single transcript. 2021-10-25 09:33:20.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9397764, 9397832), (9397772, 9397832)] 2021-10-25 09:33:20.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19266358, 19266593)] 2021-10-25 09:33:20.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035632: ['FBtr0077120'] 2021-10-25 09:33:20.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035632 has a single transcript. 2021-10-25 09:33:20.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035636: ['FBtr0077117'] 2021-10-25 09:33:20.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035636 has a single transcript. 2021-10-25 09:33:20.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035638: ['FBtr0077115', 'FBtr0331521', 'FBtr0331522'] 2021-10-25 09:33:20.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052374: ['FBtr0076828'] 2021-10-25 09:33:20.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052374 has a single transcript. 2021-10-25 09:33:20.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052376: ['FBtr0076827'] 2021-10-25 09:33:20.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052376 has a single transcript. 2021-10-25 09:33:20.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052379: ['FBtr0273419'] 2021-10-25 09:33:20.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052379 has a single transcript. 2021-10-25 09:33:20.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052380: ['FBtr0076870'] 2021-10-25 09:33:20.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052380 has a single transcript. 2021-10-25 09:33:20.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000541: ['FBtr0072521', 'FBtr0072522', 'FBtr0072523', 'FBtr0301348', 'FBtr0301349', 'FBtr0332101', 'FBtr0332102', 'FBtr0332103', 'FBtr0332104'] 2021-10-25 09:33:20.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052382: ['FBtr0300362', 'FBtr0346808'] 2021-10-25 09:33:20.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032116: ['FBtr0079807', 'FBtr0303896', 'FBtr0303897'] 2021-10-25 09:33:20.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266457: ['FBtr0344464'] 2021-10-25 09:33:20.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266457 has a single transcript. 2021-10-25 09:33:20.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24221626, 24222342), (24221753, 24222342), (24221925, 24222342), (24222474, 24222535)] 2021-10-25 09:33:20.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039065: ['FBtr0084388', 'FBtr0301088', 'FBtr0334499', 'FBtr0334500', 'FBtr0334501', 'FBtr0334502'] 2021-10-25 09:33:20.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260006: ['FBtr0100009'] 2021-10-25 09:33:20.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260006 has a single transcript. 2021-10-25 09:33:20.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266459: ['FBtr0344488', 'FBtr0344489'] 2021-10-25 09:33:20.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260007: ['FBtr0300507'] 2021-10-25 09:33:20.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260007 has a single transcript. 2021-10-25 09:33:20.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260008: ['FBtr0343636', 'FBtr0301783', 'FBtr0301784', 'FBtr0301785', 'FBtr0333873'] 2021-10-25 09:33:20.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5795143, 5795548), (5796061, 5796129), (5796310, 5796427), (5796374, 5796427)] 2021-10-25 09:33:20.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7439913, 7439973)] 2021-10-25 09:33:20.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16042527, 16043074), (16043245, 16043823), (16044361, 16044422), (16044472, 16044787), (16044857, 16044920), (16045000, 16045065), (16045392, 16045840), (16045966, 16046026), (16046408, 16046601), (16047729, 16047957)] 2021-10-25 09:33:20.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.371 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9416622, 9420522), (9416642, 9420522), (9416654, 9420522), (9420878, 9423292), (9423474, 9423544), (9425629, 9425695)] 2021-10-25 09:33:20.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052383: ['FBtr0300363'] 2021-10-25 09:33:20.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052383 has a single transcript. 2021-10-25 09:33:20.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266464: ['FBtr0082883', 'FBtr0344766', 'FBtr0344767'] 2021-10-25 09:33:20.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052391: ['FBtr0392917'] 2021-10-25 09:33:20.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052391 has a single transcript. 2021-10-25 09:33:20.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052392: ['FBtr0076947', 'FBtr0076948'] 2021-10-25 09:33:20.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23249682, 23249740), (23249963, 23250022), (23250201, 23250256), (23250363, 23250426), (23250537, 23250599), (23250537, 23250605), (23250540, 23250599), (23250540, 23250605), (23251102, 23251166)] 2021-10-25 09:33:20.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035639: ['FBtr0077112', 'FBtr0310533', 'FBtr0310534'] 2021-10-25 09:33:20.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026259: ['FBtr0073144', 'FBtr0309836', 'FBtr0309837', 'FBtr0309838', 'FBtr0309839'] 2021-10-25 09:33:20.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25120796, 25120893), (25120818, 25120893), (25120818, 25120877), (25120985, 25121043), (25120985, 25121617), (25121813, 25122889), (25122986, 25125543)] 2021-10-25 09:33:20.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6757454, 6757518), (6757934, 6758019), (6758110, 6759940), (6758110, 6762922)] 2021-10-25 09:33:20.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.468 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13835537, 13835776), (13836742, 13837377), (13837702, 13837802)] 2021-10-25 09:33:20.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032117: ['FBtr0079811', 'FBtr0343431', 'FBtr0346623'] 2021-10-25 09:33:20.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.469 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(234504, 234567), (234652, 234981), (235345, 235409), (235514, 235578), (236074, 236138), (236427, 236862), (236427, 239054), (236501, 236553), (236755, 239054), (236906, 239054), (239185, 239242), (240116, 240176), (240667, 240733), (241057, 241117), (241498, 241563), (241501, 241563), (245475, 245927), (246323, 246794), (246323, 246382), (246323, 246885), (246323, 246427)] 2021-10-25 09:33:20.493 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0072521_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.494 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0072523_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.494 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0301348_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.495 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0332101_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.495 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0332102_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0332103_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (239242, 240667, 'FBtr0332104_exon_6') contains intron (240116, 240176) 2021-10-25 09:33:20.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072521_exon_6', 'FBtr0072523_exon_6', 'FBtr0301348_exon_6', 'FBtr0332101_exon_6', 'FBtr0332102_exon_6', 'FBtr0332103_exon_6', 'FBtr0332104_exon_6'] 2021-10-25 09:33:20.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052396: ['FBtr0076969'] 2021-10-25 09:33:20.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052396 has a single transcript. 2021-10-25 09:33:20.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5811320, 5811385), (5811918, 5812064), (5811979, 5812064)] 2021-10-25 09:33:20.527 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5811385, 5812228, 'FBtr0310534_exon_2') contains intron (5811918, 5812064) 2021-10-25 09:33:20.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310534_exon_2'] 2021-10-25 09:33:20.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052404: ['FBtr0077023', 'FBtr0307048'] 2021-10-25 09:33:20.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9429345, 9429411), (9429589, 9430022), (9430429, 9430696)] 2021-10-25 09:33:20.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3429083, 3443457), (3429083, 3432203), (3432365, 3445364), (3432365, 3443457), (3443565, 3445364), (3445560, 3447647), (3447724, 3457214), (3457347, 3457411), (3458840, 3458947), (3460098, 3460171), (3460603, 3460706), (3460628, 3460706)] 2021-10-25 09:33:20.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.562 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6142187, 6142252), (6142187, 6142248)] 2021-10-25 09:33:20.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266465: ['FBtr0083399'] 2021-10-25 09:33:20.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266465 has a single transcript. 2021-10-25 09:33:20.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266486: ['FBtr0344529', 'FBtr0344530'] 2021-10-25 09:33:20.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052405: ['FBtr0077024'] 2021-10-25 09:33:20.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052405 has a single transcript. 2021-10-25 09:33:20.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052406: ['FBtr0077037'] 2021-10-25 09:33:20.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052406 has a single transcript. 2021-10-25 09:33:20.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052407: ['FBtr0077032', 'FBtr0330118'] 2021-10-25 09:33:20.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035640: ['FBtr0077113'] 2021-10-25 09:33:20.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035640 has a single transcript. 2021-10-25 09:33:20.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9187134, 9188119), (9188265, 9188653), (9189008, 9189066), (9189220, 9191275)] 2021-10-25 09:33:20.657 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9186669, 9188265, 'FBtr0344529_exon_4') contains intron (9187134, 9188119) 2021-10-25 09:33:20.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344529_exon_4'] 2021-10-25 09:33:20.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035641: ['FBtr0077025'] 2021-10-25 09:33:20.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035641 has a single transcript. 2021-10-25 09:33:20.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032119: ['FBtr0079810'] 2021-10-25 09:33:20.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032119 has a single transcript. 2021-10-25 09:33:20.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039066: ['FBtr0084374', 'FBtr0084375'] 2021-10-25 09:33:20.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035642: ['FBtr0300903', 'FBtr0331562'] 2021-10-25 09:33:20.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032120: ['FBtr0089854', 'FBtr0089853', 'FBtr0301064', 'FBtr0301065'] 2021-10-25 09:33:20.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260011: ['FBtr0080592'] 2021-10-25 09:33:20.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260011 has a single transcript. 2021-10-25 09:33:20.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5922733, 5922806), (5923292, 5923355)] 2021-10-25 09:33:20.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260012: ['FBtr0087974', 'FBtr0306062'] 2021-10-25 09:33:20.718 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5873773, 5873857), (5873800, 5873857), (5874369, 5874421)] 2021-10-25 09:33:20.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266487: ['FBtr0344531', 'FBtr0344532'] 2021-10-25 09:33:20.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23251785, 23252248), (23251957, 23252248), (23252836, 23252891), (23253269, 23253324), (23253542, 23253600), (23253695, 23253752), (23253952, 23254017), (23254309, 23254368)] 2021-10-25 09:33:20.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12028232, 12028552), (12028232, 12028294), (12028655, 12028716), (12029102, 12029165), (12029373, 12029431), (12029600, 12029663), (12030405, 12030469), (12030733, 12030790), (12030884, 12030946), (12031792, 12031857), (12031994, 12032055), (12032135, 12032196), (12032462, 12032534), (12032825, 12032888)] 2021-10-25 09:33:20.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12612851, 12613566), (12612884, 12613566), (12614345, 12615906), (12616414, 12616539), (12616724, 12616786), (12616941, 12617071), (12617200, 12617794), (12617924, 12617986), (12618140, 12618442), (12618550, 12619063)] 2021-10-25 09:33:20.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026261: ['FBtr0071860'] 2021-10-25 09:33:20.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026261 has a single transcript. 2021-10-25 09:33:20.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052409: ['FBtr0077030'] 2021-10-25 09:33:20.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052409 has a single transcript. 2021-10-25 09:33:20.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9495656, 9496144), (9495711, 9496144), (9496255, 9503592), (9504813, 9515313), (9515494, 9515564), (9515744, 9515811), (9515936, 9515994), (9517062, 9517129), (9517461, 9517530), (9517903, 9517991), (9518159, 9518218), (9518558, 9518622), (9518808, 9518875), (9519076, 9519146), (9519334, 9519393), (9519479, 9519719), (9519534, 9519719)] 2021-10-25 09:33:20.779 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9495473, 9496255, 'FBtr0089854_exon_1') contains intron (9495656, 9496144) 2021-10-25 09:33:20.780 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9495473, 9496255, 'FBtr0089853_exon_1') contains intron (9495656, 9496144) 2021-10-25 09:33:20.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089854_exon_1', 'FBtr0089853_exon_1'] 2021-10-25 09:33:20.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026262: ['FBtr0089110'] 2021-10-25 09:33:20.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026262 has a single transcript. 2021-10-25 09:33:20.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035643: ['FBtr0077027', 'FBtr0330086'] 2021-10-25 09:33:20.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052412: ['FBtr0077080'] 2021-10-25 09:33:20.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052412 has a single transcript. 2021-10-25 09:33:20.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026263: ['FBtr0076745', 'FBtr0302329'] 2021-10-25 09:33:20.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039067: ['FBtr0084387'] 2021-10-25 09:33:20.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039067 has a single transcript. 2021-10-25 09:33:20.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052413: ['FBtr0305274'] 2021-10-25 09:33:20.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052413 has a single transcript. 2021-10-25 09:33:20.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052418: ['FBtr0077119'] 2021-10-25 09:33:20.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052418 has a single transcript. 2021-10-25 09:33:20.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039068: ['FBtr0084376', 'FBtr0307596'] 2021-10-25 09:33:20.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052420: ['FBtr0077143'] 2021-10-25 09:33:20.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052420 has a single transcript. 2021-10-25 09:33:20.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052421: ['FBtr0077158'] 2021-10-25 09:33:20.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052421 has a single transcript. 2021-10-25 09:33:20.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260026: ['FBtr0300583', 'FBtr0300584', 'FBtr0344804'] 2021-10-25 09:33:20.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052423: ['FBtr0077172', 'FBtr0077173', 'FBtr0077174', 'FBtr0333287', 'FBtr0333288', 'FBtr0333289', 'FBtr0301599', 'FBtr0308859'] 2021-10-25 09:33:20.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8055439, 8055875), (8056173, 8057879), (8056173, 8056308), (8058046, 8058460)] 2021-10-25 09:33:20.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:20.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266488: ['FBtr0344533'] 2021-10-25 09:33:20.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266488 has a single transcript. 2021-10-25 09:33:20.841 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23258546, 23259676), (23258981, 23259676), (23260041, 23260101), (23260161, 23260220)] 2021-10-25 09:33:20.842 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266489: ['FBtr0344528'] 2021-10-25 09:33:20.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266489 has a single transcript. 2021-10-25 09:33:20.855 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077027': ['FBtr0330086']} 2021-10-25 09:33:20.855 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330086']] 2021-10-25 09:33:20.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266490: ['FBtr0344535', 'FBtr0344536', 'FBtr0344537'] 2021-10-25 09:33:20.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035644: ['FBtr0077081'] 2021-10-25 09:33:20.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035644 has a single transcript. 2021-10-25 09:33:20.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035645: ['FBtr0077029'] 2021-10-25 09:33:20.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035645 has a single transcript. 2021-10-25 09:33:20.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035647: ['FBtr0114644', 'FBtr0305273'] 2021-10-25 09:33:20.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3184644, 3185228), (3184644, 3185360), (3185422, 3185480), (3185577, 3185633), (3185952, 3186011), (3186296, 3186348)] 2021-10-25 09:33:20.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039069: ['FBtr0084378', 'FBtr0334497'] 2021-10-25 09:33:20.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000542: ['FBtr0070606', 'FBtr0112801', 'FBtr0112802'] 2021-10-25 09:33:20.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026268: ['FBtr0073468'] 2021-10-25 09:33:20.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026268 has a single transcript. 2021-10-25 09:33:20.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026309: ['FBtr0089549'] 2021-10-25 09:33:20.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026309 has a single transcript. 2021-10-25 09:33:20.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5905386, 5905454), (5905647, 5905728), (5906546, 5906598)] 2021-10-25 09:33:20.924 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5905454, 5906546, 'FBtr0305273_exon_2') contains intron (5905647, 5905728) 2021-10-25 09:33:20.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305273_exon_2'] 2021-10-25 09:33:20.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032122: ['FBtr0079829'] 2021-10-25 09:33:20.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7893490, 7893749), (7893490, 7893587)] 2021-10-25 09:33:20.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032122 has a single transcript. 2021-10-25 09:33:20.931 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026313: ['FBtr0074451', 'FBtr0333757', 'FBtr0301696', 'FBtr0340620', 'FBtr0340621'] 2021-10-25 09:33:20.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032123: ['FBtr0079825', 'FBtr0079826', 'FBtr0079827', 'FBtr0079828'] 2021-10-25 09:33:20.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23285595, 23285661)] 2021-10-25 09:33:20.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.962 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3812272, 3820725), (3821015, 3841323), (3836840, 3841323), (3841416, 3850962), (3846207, 3850245), (3850711, 3850962), (3851256, 3851936), (3852065, 3852139)] 2021-10-25 09:33:20.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:20.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:20.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035648: ['FBtr0113148', 'FBtr0331563'] 2021-10-25 09:33:20.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260027: ['FBtr0300582'] 2021-10-25 09:33:20.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260027 has a single transcript. 2021-10-25 09:33:21.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260049: ['FBtr0075845', 'FBtr0075846'] 2021-10-25 09:33:21.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5161601, 5162455), (5161601, 5161767), (5161803, 5162455), (5161808, 5162455), (5162610, 5162966), (5162631, 5162966), (5163131, 5163344), (5163149, 5163344), (5163703, 5163833), (5163969, 5166934), (5163975, 5166934), (5163975, 5166967), (5167059, 5168243), (5167059, 5168249), (5168302, 5170186), (5170440, 5218949), (5170440, 5201064), (5170440, 5184214), (5170440, 5200330), (5200366, 5218949), (5219285, 5247553), (5219285, 5276154), (5219285, 5271339), (5247843, 5248194), (5276363, 5277613)] 2021-10-25 09:33:21.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039070: ['FBtr0084383'] 2021-10-25 09:33:21.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039070 has a single transcript. 2021-10-25 09:33:21.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5907879, 5908583), (5908707, 5908813), (5908899, 5908971), (5909130, 5909209), (5909296, 5909391), (5909596, 5916916), (5909596, 5909663), (5917031, 5917106)] 2021-10-25 09:33:21.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9521440, 9523162), (9521495, 9533513), (9521495, 9523162), (9523343, 9533513), (9533751, 9534886), (9534793, 9534886), (9535908, 9535994), (9536849, 9536911), (9537326, 9537392), (9537544, 9537612), (9537742, 9537804)] 2021-10-25 09:33:21.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039071: ['FBtr0084382'] 2021-10-25 09:33:21.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039071 has a single transcript. 2021-10-25 09:33:21.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039073: ['FBtr0084431', 'FBtr0339619'] 2021-10-25 09:33:21.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266491: ['FBtr0344543', 'FBtr0344544', 'FBtr0344545'] 2021-10-25 09:33:21.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13412975, 13413316), (13413073, 13413316), (13413438, 13414057), (13414148, 13414336), (13414600, 13414665), (13415720, 13415776), (13415927, 13415994)] 2021-10-25 09:33:21.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17599679, 17600772), (17600421, 17600772), (17601304, 17601379), (17601919, 17601981), (17601919, 17601984), (17602095, 17602151), (17603093, 17603155), (17603471, 17603695), (17603471, 17603713), (17603835, 17604070), (17603835, 17603973), (17603979, 17604070), (17604436, 17604494), (17604971, 17605041), (17605182, 17605237)] 2021-10-25 09:33:21.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035649: ['FBtr0077077'] 2021-10-25 09:33:21.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035649 has a single transcript. 2021-10-25 09:33:21.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:21.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000543: ['FBtr0072903'] 2021-10-25 09:33:21.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000543 has a single transcript. 2021-10-25 09:33:21.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035656: ['FBtr0077070', 'FBtr0332041'] 2021-10-25 09:33:21.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000546: ['FBtr0086008', 'FBtr0086009', 'FBtr0086010', 'FBtr0086011', 'FBtr0086012', 'FBtr0302439'] 2021-10-25 09:33:21.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16838006, 16839212), (16838663, 16839212), (16839355, 16841344), (16839355, 16840269), (16840578, 16841344), (16841425, 16841498)] 2021-10-25 09:33:21.112 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260222: ['FBtr0300625', 'FBtr0342958'] 2021-10-25 09:33:21.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5968593, 5968813), (5968596, 5968813), (5969074, 5975644)] 2021-10-25 09:33:21.139 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039075: ['FBtr0301085', 'FBtr0339616', 'FBtr0339617'] 2021-10-25 09:33:21.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21691436, 21691668), (21692170, 21692234), (21692374, 21692431)] 2021-10-25 09:33:21.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032124: ['FBtr0079830'] 2021-10-25 09:33:21.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032124 has a single transcript. 2021-10-25 09:33:21.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035657: ['FBtr0077069'] 2021-10-25 09:33:21.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035657 has a single transcript. 2021-10-25 09:33:21.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032125: ['FBtr0079831'] 2021-10-25 09:33:21.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032125 has a single transcript. 2021-10-25 09:33:21.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035661: ['FBtr0077068', 'FBtr0346804'] 2021-10-25 09:33:21.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032126: ['FBtr0079832'] 2021-10-25 09:33:21.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032126 has a single transcript. 2021-10-25 09:33:21.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032127: ['FBtr0273329'] 2021-10-25 09:33:21.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032127 has a single transcript. 2021-10-25 09:33:21.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266492: ['FBtr0344539', 'FBtr0344540', 'FBtr0344541', 'FBtr0344542'] 2021-10-25 09:33:21.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032129: ['FBtr0079860', 'FBtr0079861', 'FBtr0113030', 'FBtr0304056', 'FBtr0304057'] 2021-10-25 09:33:21.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026314: ['FBtr0082375'] 2021-10-25 09:33:21.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026314 has a single transcript. 2021-10-25 09:33:21.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260223: ['FBtr0300626'] 2021-10-25 09:33:21.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260223 has a single transcript. 2021-10-25 09:33:21.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6093733, 6093796), (6093949, 6094009), (6094153, 6094556), (6095071, 6131065), (6095071, 6122881), (6095071, 6151829), (6123847, 6131065), (6151996, 6152068), (6152550, 6168755), (6152550, 6156157), (6156368, 6156929), (6156414, 6156929)] 2021-10-25 09:33:21.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23377732, 23377794), (23377926, 23377988), (23378150, 23378270), (23378433, 23378502), (23378793, 23378862), (23379074, 23379140), (23380146, 23380258), (23380481, 23380535), (23380981, 23381041), (23381360, 23381653), (23382547, 23384499), (23382547, 23382676)] 2021-10-25 09:33:21.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026315: ['FBtr0082374'] 2021-10-25 09:33:21.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026315 has a single transcript. 2021-10-25 09:33:21.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6034293, 6034345)] 2021-10-25 09:33:21.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260224: ['FBtr0300624'] 2021-10-25 09:33:21.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260224 has a single transcript. 2021-10-25 09:33:21.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026316: ['FBtr0089553'] 2021-10-25 09:33:21.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026316 has a single transcript. 2021-10-25 09:33:21.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260225: ['FBtr0300629'] 2021-10-25 09:33:21.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260225 has a single transcript. 2021-10-25 09:33:21.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026317: ['FBtr0084546'] 2021-10-25 09:33:21.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026317 has a single transcript. 2021-10-25 09:33:21.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260226: ['FBtr0300627', 'FBtr0336994'] 2021-10-25 09:33:21.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026319: ['FBtr0077429', 'FBtr0334401'] 2021-10-25 09:33:21.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035663: ['FBtr0077039'] 2021-10-25 09:33:21.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035663 has a single transcript. 2021-10-25 09:33:21.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035665: ['FBtr0077041'] 2021-10-25 09:33:21.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035665 has a single transcript. 2021-10-25 09:33:21.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:21.305 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035666: ['FBtr0077042'] 2021-10-25 09:33:21.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035666 has a single transcript. 2021-10-25 09:33:21.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4362721, 4363135), (4363202, 4378905), (4372539, 4378905)] 2021-10-25 09:33:21.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035667: ['FBtr0077067', 'FBtr0346527'] 2021-10-25 09:33:21.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16838006, 16839212), (16838663, 16839212), (16839355, 16840269), (16840208, 16840269), (16840578, 16841344), (16841425, 16841498)] 2021-10-25 09:33:21.318 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16840136, 16840578, 'FBtr0344542_exon_1') contains intron (16840208, 16840269) 2021-10-25 09:33:21.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344542_exon_1'] 2021-10-25 09:33:21.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9549665, 9550203), (9550404, 9551716), (9550404, 9550478), (9553526, 9553587), (9553728, 9553802), (9553939, 9553999), (9554268, 9555283), (9555498, 9555633), (9556398, 9565003), (9556398, 9560396), (9556398, 9566432), (9556398, 9560087)] 2021-10-25 09:33:21.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:21.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039077: ['FBtr0299867'] 2021-10-25 09:33:21.361 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039077 has a single transcript. 2021-10-25 09:33:21.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052425: ['FBtr0078202', 'FBtr0078203', 'FBtr0078204', 'FBtr0078205', 'FBtr0113436'] 2021-10-25 09:33:21.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260228: ['FBtr0345441', 'FBtr0300635', 'FBtr0343835'] 2021-10-25 09:33:21.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039078: ['FBtr0310575', 'FBtr0303342'] 2021-10-25 09:33:21.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026320: ['FBtr0075620'] 2021-10-25 09:33:21.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026320 has a single transcript. 2021-10-25 09:33:21.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026323: ['FBtr0077319', 'FBtr0340404'] 2021-10-25 09:33:21.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035669: ['FBtr0077044'] 2021-10-25 09:33:21.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035669 has a single transcript. 2021-10-25 09:33:21.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035670: ['FBtr0077066'] 2021-10-25 09:33:21.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035670 has a single transcript. 2021-10-25 09:33:21.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035673: ['FBtr0077047'] 2021-10-25 09:33:21.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035673 has a single transcript. 2021-10-25 09:33:21.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23412017, 23412148), (23412679, 23430872), (23412679, 23452862), (23452933, 23470974)] 2021-10-25 09:33:21.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.420 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035674: ['FBtr0077065'] 2021-10-25 09:33:21.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035674 has a single transcript. 2021-10-25 09:33:21.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18810684, 18810818)] 2021-10-25 09:33:21.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035675: ['FBtr0077048', 'FBtr0332059', 'FBtr0332060'] 2021-10-25 09:33:21.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20516543, 20516658), (20517122, 20521223), (20517122, 20517698), (20521272, 20521627), (20522041, 20522263), (20522445, 20522504), (20522820, 20523058), (20523358, 20523898)] 2021-10-25 09:33:21.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266518: ['FBtr0086146', 'FBtr0336664'] 2021-10-25 09:33:21.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039079: ['FBtr0273202'] 2021-10-25 09:33:21.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039079 has a single transcript. 2021-10-25 09:33:21.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000547: ['FBtr0077465', 'FBtr0334265', 'FBtr0334266'] 2021-10-25 09:33:21.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20497425, 20511936), (20497425, 20510029), (20498464, 20510029), (20509775, 20510029), (20509960, 20510029), (20510779, 20511936), (20512385, 20512520), (20513075, 20513137)] 2021-10-25 09:33:21.482 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039080: ['FBtr0273205'] 2021-10-25 09:33:21.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039080 has a single transcript. 2021-10-25 09:33:21.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039081: ['FBtr0084425', 'FBtr0084426', 'FBtr0301859', 'FBtr0339622'] 2021-10-25 09:33:21.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026324: ['FBtr0077735'] 2021-10-25 09:33:21.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026324 has a single transcript. 2021-10-25 09:33:21.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026326: ['FBtr0088599'] 2021-10-25 09:33:21.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026326 has a single transcript. 2021-10-25 09:33:21.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026361: ['FBtr0088877', 'FBtr0088876'] 2021-10-25 09:33:21.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6661241, 6661298)] 2021-10-25 09:33:21.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.534 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6075688, 6075760), (6075957, 6076022), (6076144, 6076210)] 2021-10-25 09:33:21.535 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6076022, 6076258, 'FBtr0077048_exon_3') contains intron (6076144, 6076210) 2021-10-25 09:33:21.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077048_exon_3'] 2021-10-25 09:33:21.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032130: ['FBtr0079834', 'FBtr0079835'] 2021-10-25 09:33:21.568 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7961782, 7961842)] 2021-10-25 09:33:21.568 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7960217, 7961921, 'FBtr0088877_exon_1') contains intron (7961782, 7961842) 2021-10-25 09:33:21.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088877_exon_1'] 2021-10-25 09:33:21.569 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260229: ['FBtr0300637'] 2021-10-25 09:33:21.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260229 has a single transcript. 2021-10-25 09:33:21.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260230: ['FBtr0300639'] 2021-10-25 09:33:21.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260230 has a single transcript. 2021-10-25 09:33:21.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4031555, 4032422), (4032769, 4074513), (4074712, 4079503), (4079764, 4079825), (4080022, 4097849), (4100039, 4100621), (4101128, 4107435), (4107804, 4113297), (4107804, 4113620), (4113344, 4113620)] 2021-10-25 09:33:21.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266521: ['FBtr0079196', 'FBtr0079197', 'FBtr0079198', 'FBtr0304908', 'FBtr0333406'] 2021-10-25 09:33:21.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260231: ['FBtr0300638'] 2021-10-25 09:33:21.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260231 has a single transcript. 2021-10-25 09:33:21.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260233: ['FBtr0300641', 'FBtr0300642'] 2021-10-25 09:33:21.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9569198, 9571476), (9571414, 9571476), (9571753, 9571841), (9571894, 9571955)] 2021-10-25 09:33:21.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23514145, 23514376), (23514145, 23514208), (23514323, 23514376), (23514326, 23514376), (23515159, 23515212), (23515487, 23518069), (23515487, 23518457), (23518705, 23519150)] 2021-10-25 09:33:21.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026369: ['FBtr0071641'] 2021-10-25 09:33:21.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026369 has a single transcript. 2021-10-25 09:33:21.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026370: ['FBtr0087383', 'FBtr0087384', 'FBtr0087385', 'FBtr0330628'] 2021-10-25 09:33:21.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035676: ['FBtr0077049', 'FBtr0345594'] 2021-10-25 09:33:21.645 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14749737, 14751266), (14751775, 14752698), (14751775, 14753333), (14753471, 14753630), (14753966, 14754084), (14754550, 14756903), (14757330, 14757841)] 2021-10-25 09:33:21.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.646 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032131: ['FBtr0079836', 'FBtr0303250'] 2021-10-25 09:33:21.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6077345, 6078918), (6079281, 6079341)] 2021-10-25 09:33:21.683 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.683 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052428: ['FBtr0078222', 'FBtr0300452', 'FBtr0303381'] 2021-10-25 09:33:21.709 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9589585, 9589655), (9590677, 9590739), (9591190, 9591315)] 2021-10-25 09:33:21.710 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260234: ['FBtr0300643', 'FBtr0310518'] 2021-10-25 09:33:21.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000551: ['FBtr0078408', 'FBtr0344634'] 2021-10-25 09:33:21.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15380881, 15381412), (15381558, 15381849), (15381747, 15381849), (15382413, 15383402), (15383299, 15383402), (15384299, 15384495)] 2021-10-25 09:33:21.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6100549, 6101693), (6101798, 6109772), (6101798, 6121773), (6110224, 6113029), (6113113, 6121773), (6121210, 6121773), (6121943, 6122004), (6122190, 6122263), (6122410, 6122977), (6122410, 6122697), (6122853, 6122977)] 2021-10-25 09:33:21.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087383': ['FBtr0330628']} 2021-10-25 09:33:21.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330628']] 2021-10-25 09:33:21.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035677: ['FBtr0332061', 'FBtr0332062', 'FBtr0332063', 'FBtr0332064'] 2021-10-25 09:33:21.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19915012, 19915080), (19915012, 19915076)] 2021-10-25 09:33:21.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20469984, 20470953), (20471148, 20472640), (20473188, 20473593)] 2021-10-25 09:33:21.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21297641, 21297715)] 2021-10-25 09:33:21.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039083: ['FBtr0084424'] 2021-10-25 09:33:21.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039083 has a single transcript. 2021-10-25 09:33:21.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039084: ['FBtr0084422', 'FBtr0084423', 'FBtr0084421', 'FBtr0344701', 'FBtr0339621'] 2021-10-25 09:33:21.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032132: ['FBtr0114535'] 2021-10-25 09:33:21.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032132 has a single transcript. 2021-10-25 09:33:21.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032135: ['FBtr0079841', 'FBtr0079842', 'FBtr0302199'] 2021-10-25 09:33:21.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026371: ['FBtr0078387'] 2021-10-25 09:33:21.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026371 has a single transcript. 2021-10-25 09:33:21.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260237: ['FBtr0300646'] 2021-10-25 09:33:21.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260237 has a single transcript. 2021-10-25 09:33:21.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026372: ['FBtr0072805'] 2021-10-25 09:33:21.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026372 has a single transcript. 2021-10-25 09:33:21.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260238: ['FBtr0300651', 'FBtr0346519'] 2021-10-25 09:33:21.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026373: ['FBtr0080544'] 2021-10-25 09:33:21.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026373 has a single transcript. 2021-10-25 09:33:21.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6083353, 6087219), (6083353, 6087216), (6087366, 6087423), (6087606, 6087667), (6087886, 6087942), (6087898, 6087954), (6088077, 6088705), (6088077, 6088690), (6089151, 6089209), (6089464, 6089525), (6089729, 6089789)] 2021-10-25 09:33:21.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000552: ['FBtr0081688'] 2021-10-25 09:33:21.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000552 has a single transcript. 2021-10-25 09:33:21.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026374: ['FBtr0074096', 'FBtr0074095'] 2021-10-25 09:33:21.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000557: ['FBtr0085832', 'FBtr0085833', 'FBtr0085834', 'FBtr0085835'] 2021-10-25 09:33:21.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9616513, 9621144), (9617609, 9621144), (9617840, 9621144), (9621417, 9621478), (9621741, 9621956), (9622308, 9622365)] 2021-10-25 09:33:21.868 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16651530, 16651586), (16652016, 16652078)] 2021-10-25 09:33:21.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052432: ['FBtr0078268', 'FBtr0333372'] 2021-10-25 09:33:21.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15788957, 15790246), (15789112, 15790246), (15790388, 15790742), (15790859, 15790978), (15791106, 15791242), (15791396, 15791461), (15791902, 15791987), (15792144, 15792209), (15792457, 15792517), (15792647, 15792711), (15793037, 15793091), (15793244, 15793308)] 2021-10-25 09:33:21.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23523264, 23523321), (23523602, 23523667), (23523837, 23523898), (23524797, 23524852), (23524989, 23525495), (23525600, 23528675), (23525600, 23526833), (23528846, 23530941)] 2021-10-25 09:33:21.902 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23524852, 23525600, 'FBtr0084422_exon_3') contains intron (23524989, 23525495) 2021-10-25 09:33:21.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084422_exon_3'] 2021-10-25 09:33:21.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20844548, 20845928), (20846022, 20846089), (20846291, 20846348), (20846555, 20846611), (20846795, 20846853), (20847120, 20847177), (20847511, 20847564), (20847780, 20847835), (20848245, 20848322), (20848514, 20852578), (20848514, 20851412), (20851442, 20852578), (20852761, 20854056), (20854187, 20854604), (20854868, 20854936), (20855040, 20855103), (20855291, 20856425), (20856562, 20859679), (20860426, 20881629), (20881810, 20884989)] 2021-10-25 09:33:21.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260243: ['FBtr0082012'] 2021-10-25 09:33:21.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260243 has a single transcript. 2021-10-25 09:33:21.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266525: ['FBtr0344559', 'FBtr0344560', 'FBtr0344561'] 2021-10-25 09:33:21.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31738529, 31739776), (31739709, 31739776), (31739864, 31740316), (31739864, 31740319), (31741169, 31741626), (31741832, 31741909)] 2021-10-25 09:33:21.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260386: ['FBtr0344713', 'FBtr0344714', 'FBtr0310080', 'FBtr0310081'] 2021-10-25 09:33:21.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:21.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:21.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026375: ['FBtr0074481', 'FBtr0074482', 'FBtr0074483', 'FBtr0333659', 'FBtr0333660', 'FBtr0333661', 'FBtr0333662'] 2021-10-25 09:33:21.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032136: ['FBtr0303874'] 2021-10-25 09:33:22.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032136 has a single transcript. 2021-10-25 09:33:22.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032138: ['FBtr0079848'] 2021-10-25 09:33:22.112 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032138 has a single transcript. 2021-10-25 09:33:22.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032139: ['FBtr0079863', 'FBtr0335502'] 2021-10-25 09:33:22.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052436: ['FBtr0078343'] 2021-10-25 09:33:22.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052436 has a single transcript. 2021-10-25 09:33:22.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6700817, 6700881), (6701122, 6701189), (6701371, 6701812), (6701922, 6702386), (6704586, 6705234), (6706198, 6715103), (6706198, 6707644), (6706198, 6712082)] 2021-10-25 09:33:22.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052437: ['FBtr0078344'] 2021-10-25 09:33:22.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052437 has a single transcript. 2021-10-25 09:33:22.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052438: ['FBtr0301600', 'FBtr0301601', 'FBtr0333455', 'FBtr0333456'] 2021-10-25 09:33:22.167 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:22.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8250567, 8252052), (8250570, 8252052), (8250570, 8258390), (8250570, 8257376), (8252221, 8258390), (8252221, 8257376), (8257499, 8258390), (8258524, 8258585), (8258975, 8259046), (8259457, 8259546), (8259702, 8259773)] 2021-10-25 09:33:22.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032140: ['FBtr0079864', 'FBtr0335503'] 2021-10-25 09:33:22.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039085: ['FBtr0084420'] 2021-10-25 09:33:22.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039085 has a single transcript. 2021-10-25 09:33:22.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039086: ['FBtr0084419', 'FBtr0303507'] 2021-10-25 09:33:22.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035678: ['FBtr0077064'] 2021-10-25 09:33:22.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035678 has a single transcript. 2021-10-25 09:33:22.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035679: ['FBtr0077063'] 2021-10-25 09:33:22.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035679 has a single transcript. 2021-10-25 09:33:22.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266526: ['FBtr0344565', 'FBtr0344566', 'FBtr0344567', 'FBtr0344568'] 2021-10-25 09:33:22.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035685: ['FBtr0077020'] 2021-10-25 09:33:22.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035685 has a single transcript. 2021-10-25 09:33:22.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000559: ['FBtr0085911', 'FBtr0085912', 'FBtr0332966'] 2021-10-25 09:33:22.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17641816, 17641900), (17642045, 17642105), (17642237, 17642302), (17642699, 17642777), (17642830, 17643013), (17642830, 17643022), (17643247, 17643680), (17643247, 17646519), (17644178, 17646519), (17644178, 17644763), (17644808, 17646519), (17644808, 17645886), (17646012, 17646519), (17646585, 17646650), (17646893, 17646958), (17647137, 17647216), (17647799, 17648122), (17648805, 17648945), (17650238, 17652498), (17650238, 17650719), (17650238, 17651185), (17650238, 17652090)] 2021-10-25 09:33:22.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21569452, 21569520), (21569893, 21569956), (21570135, 21570256), (21570503, 21570719), (21570503, 21570555), (21570654, 21570719), (21571007, 21571061), (21571163, 21571221), (21571430, 21571489), (21571653, 21571731), (21572061, 21572116), (21572334, 21572390), (21572615, 21572685), (21572910, 21573002), (21572910, 21572975), (21573133, 21573189), (21573307, 21573367)] 2021-10-25 09:33:22.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:22.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035686: ['FBtr0076996'] 2021-10-25 09:33:22.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035686 has a single transcript. 2021-10-25 09:33:22.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035687: ['FBtr0076997'] 2021-10-25 09:33:22.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035687 has a single transcript. 2021-10-25 09:33:22.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23536382, 23536435), (23536382, 23536444)] 2021-10-25 09:33:22.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035688: ['FBtr0077019', 'FBtr0331789', 'FBtr0331790', 'FBtr0331791'] 2021-10-25 09:33:22.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21679402, 21679483), (21680180, 21680756), (21681284, 21681343), (21681558, 21682038)] 2021-10-25 09:33:22.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260388: ['FBtr0300655', 'FBtr0300656', 'FBtr0300657'] 2021-10-25 09:33:22.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032143: ['FBtr0079867'] 2021-10-25 09:33:22.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032143 has a single transcript. 2021-10-25 09:33:22.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039087: ['FBtr0084418'] 2021-10-25 09:33:22.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039087 has a single transcript. 2021-10-25 09:33:22.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032144: ['FBtr0079868'] 2021-10-25 09:33:22.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032144 has a single transcript. 2021-10-25 09:33:22.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039088: ['FBtr0084417', 'FBtr0300585'] 2021-10-25 09:33:22.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032147: ['FBtr0079869', 'FBtr0307204'] 2021-10-25 09:33:22.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7741920, 7778474), (7741920, 7758034), (7741920, 7742007), (7741920, 7744879), (7779885, 7781726)] 2021-10-25 09:33:22.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6169927, 6170116), (6169942, 6170116), (6170804, 6170876), (6171169, 6171227), (6171292, 6171347), (6171921, 6171981), (6172100, 6172155), (6172294, 6172356), (6172670, 6172731), (6173056, 6173110), (6173310, 6173376), (6173536, 6173759)] 2021-10-25 09:33:22.374 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6170116, 6171169, 'FBtr0077019_exon_10') contains intron (6170804, 6170876) 2021-10-25 09:33:22.375 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6170116, 6171169, 'FBtr0331790_exon_10') contains intron (6170804, 6170876) 2021-10-25 09:33:22.376 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6170116, 6171169, 'FBtr0331791_exon_10') contains intron (6170804, 6170876) 2021-10-25 09:33:22.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077019_exon_10', 'FBtr0331790_exon_10', 'FBtr0331791_exon_10'] 2021-10-25 09:33:22.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23556012, 23556232)] 2021-10-25 09:33:22.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9783063, 9786685), (9786287, 9786685), (9786802, 9787149), (9787259, 9787351)] 2021-10-25 09:33:22.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16492103, 16492170), (16492499, 16492661), (16493000, 16493145), (16493940, 16495299), (16493940, 16494910), (16495536, 16496138), (16495536, 16496052)] 2021-10-25 09:33:22.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052440: ['FBtr0078345'] 2021-10-25 09:33:22.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052440 has a single transcript. 2021-10-25 09:33:22.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000560: ['FBtr0078437', 'FBtr0078438', 'FBtr0332810'] 2021-10-25 09:33:22.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052441: ['FBtr0300057', 'FBtr0300058'] 2021-10-25 09:33:22.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039089: ['FBtr0084433', 'FBtr0332427'] 2021-10-25 09:33:22.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032149: ['FBtr0079870', 'FBtr0303447'] 2021-10-25 09:33:22.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23557873, 23567514), (23567952, 23573425), (23574105, 23574302), (23574438, 23576037), (23576171, 23578569), (23578798, 23578878)] 2021-10-25 09:33:22.484 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23578569, 23579546, 'FBtr0084433_exon_6') contains intron (23578798, 23578878) 2021-10-25 09:33:22.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084433_exon_6'] 2021-10-25 09:33:22.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.491 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21574275, 21574743), (21574686, 21574743), (21574911, 21575226), (21575610, 21575669)] 2021-10-25 09:33:22.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21808804, 21814778), (21809237, 21814778), (21814856, 21816277), (21815543, 21816277)] 2021-10-25 09:33:22.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266534: ['FBtr0344623'] 2021-10-25 09:33:22.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266534 has a single transcript. 2021-10-25 09:33:22.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260390: ['FBtr0300660', 'FBtr0300661', 'FBtr0339299'] 2021-10-25 09:33:22.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266535: ['FBtr0344626'] 2021-10-25 09:33:22.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266535 has a single transcript. 2021-10-25 09:33:22.534 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9790901, 9790968), (9791694, 9791754)] 2021-10-25 09:33:22.534 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9790896, 9791694, 'FBtr0079870_exon_1') contains intron (9790901, 9790968) 2021-10-25 09:33:22.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079870_exon_1'] 2021-10-25 09:33:22.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266536: ['FBtr0344628'] 2021-10-25 09:33:22.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266536 has a single transcript. 2021-10-25 09:33:22.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035689: ['FBtr0076998', 'FBtr0331788'] 2021-10-25 09:33:22.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266537: ['FBtr0344627'] 2021-10-25 09:33:22.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266537 has a single transcript. 2021-10-25 09:33:22.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039091: ['FBtr0084486'] 2021-10-25 09:33:22.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039091 has a single transcript. 2021-10-25 09:33:22.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052442: ['FBtr0089798', 'FBtr0089797', 'FBtr0273421'] 2021-10-25 09:33:22.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266538: ['FBtr0344632'] 2021-10-25 09:33:22.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266538 has a single transcript. 2021-10-25 09:33:22.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039092: ['FBtr0304611'] 2021-10-25 09:33:22.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039092 has a single transcript. 2021-10-25 09:33:22.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266539: ['FBtr0344635'] 2021-10-25 09:33:22.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266539 has a single transcript. 2021-10-25 09:33:22.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039093: ['FBtr0273191'] 2021-10-25 09:33:22.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039093 has a single transcript. 2021-10-25 09:33:22.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266540: ['FBtr0344636'] 2021-10-25 09:33:22.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266540 has a single transcript. 2021-10-25 09:33:22.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039094: ['FBtr0084481'] 2021-10-25 09:33:22.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039094 has a single transcript. 2021-10-25 09:33:22.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266549: ['FBtr0344655'] 2021-10-25 09:33:22.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266549 has a single transcript. 2021-10-25 09:33:22.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039098: ['FBtr0084434'] 2021-10-25 09:33:22.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039098 has a single transcript. 2021-10-25 09:33:22.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6174445, 6174497), (6175654, 6175719), (6176435, 6176500), (6177056, 6177121), (6177296, 6177356), (6177742, 6177802), (6177918, 6177975), (6178207, 6178264), (6178425, 6178481)] 2021-10-25 09:33:22.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.591 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8129711, 8129794), (8130273, 8130330), (8131172, 8131255)] 2021-10-25 09:33:22.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039099: ['FBtr0084435'] 2021-10-25 09:33:22.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039099 has a single transcript. 2021-10-25 09:33:22.591 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8129794, 8131323, 'FBtr0300660_exon_1') contains intron (8130273, 8130330) 2021-10-25 09:33:22.592 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8129353, 8131172, 'FBtr0300661_exon_2') contains intron (8129711, 8129794) 2021-10-25 09:33:22.592 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8129353, 8130273, 'FBtr0339299_exon_2') contains intron (8129711, 8129794) 2021-10-25 09:33:22.593 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8130330, 8131323, 'FBtr0339299_exon_1') contains intron (8131172, 8131255) 2021-10-25 09:33:22.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300660_exon_1', 'FBtr0300661_exon_2', 'FBtr0339299_exon_2', 'FBtr0339299_exon_1'] 2021-10-25 09:33:22.593 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026376: ['FBtr0075793', 'FBtr0075794', 'FBtr0075795', 'FBtr0075796', 'FBtr0330186'] 2021-10-25 09:33:22.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266557: ['FBtr0078144', 'FBtr0078145', 'FBtr0299837', 'FBtr0308253', 'FBtr0308254', 'FBtr0308255'] 2021-10-25 09:33:22.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039101: ['FBtr0303150'] 2021-10-25 09:33:22.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039101 has a single transcript. 2021-10-25 09:33:22.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039102: ['FBtr0084440'] 2021-10-25 09:33:22.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039102 has a single transcript. 2021-10-25 09:33:22.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032150: ['FBtr0079917', 'FBtr0331285', 'FBtr0331286'] 2021-10-25 09:33:22.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039104: ['FBtr0084475'] 2021-10-25 09:33:22.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039104 has a single transcript. 2021-10-25 09:33:22.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039106: ['FBtr0114504'] 2021-10-25 09:33:22.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039106 has a single transcript. 2021-10-25 09:33:22.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000562: ['FBtr0114586', 'FBtr0343272'] 2021-10-25 09:33:22.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21528704, 21528769), (21528896, 21528957), (21528908, 21528957), (21528908, 21528965), (21529085, 21529145)] 2021-10-25 09:33:22.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039107: ['FBtr0084445'] 2021-10-25 09:33:22.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039107 has a single transcript. 2021-10-25 09:33:22.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039108: ['FBtr0345300'] 2021-10-25 09:33:22.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039108 has a single transcript. 2021-10-25 09:33:22.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039109: ['FBtr0084446', 'FBtr0084447', 'FBtr0084448', 'FBtr0084449'] 2021-10-25 09:33:22.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035690: ['FBtr0113149'] 2021-10-25 09:33:22.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035690 has a single transcript. 2021-10-25 09:33:22.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035691: ['FBtr0076999'] 2021-10-25 09:33:22.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035691 has a single transcript. 2021-10-25 09:33:22.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9792820, 9792880), (9792827, 9792880), (9792965, 9793063)] 2021-10-25 09:33:22.677 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9792880, 9793107, 'FBtr0079917_exon_1') contains intron (9792965, 9793063) 2021-10-25 09:33:22.678 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9792880, 9793107, 'FBtr0331286_exon_1') contains intron (9792965, 9793063) 2021-10-25 09:33:22.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079917_exon_1', 'FBtr0331286_exon_1'] 2021-10-25 09:33:22.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035692: ['FBtr0077015'] 2021-10-25 09:33:22.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035692 has a single transcript. 2021-10-25 09:33:22.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23735788, 23735853), (23735942, 23736001), (23736251, 23736313), (23736412, 23736473), (23738424, 23738625), (23738871, 23744336), (23744614, 23746199), (23744614, 23745097)] 2021-10-25 09:33:22.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035693: ['FBtr0077003'] 2021-10-25 09:33:22.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035693 has a single transcript. 2021-10-25 09:33:22.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035694: ['FBtr0077013'] 2021-10-25 09:33:22.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035694 has a single transcript. 2021-10-25 09:33:22.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035695: ['FBtr0077012', 'FBtr0332068'] 2021-10-25 09:33:22.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260392: ['FBtr0300662', 'FBtr0300663'] 2021-10-25 09:33:22.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13908969, 13909030), (13909183, 13909255), (13909768, 13909831), (13910215, 13910483), (13910585, 13913961), (13910585, 13921698), (13914525, 13919190), (13922001, 13922071), (13922001, 13924998), (13922075, 13924998)] 2021-10-25 09:33:22.730 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13921698, 13922075, 'FBtr0075794_exon_2') contains intron (13922001, 13922071) 2021-10-25 09:33:22.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075794_exon_2'] 2021-10-25 09:33:22.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052445: ['FBtr0078425'] 2021-10-25 09:33:22.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052445 has a single transcript. 2021-10-25 09:33:22.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6234701, 6234761), (6235118, 6235190), (6235572, 6235627), (6236188, 6236241), (6237083, 6237140), (6238025, 6238308), (6238480, 6238535), (6238781, 6239272), (6238781, 6238894)] 2021-10-25 09:33:22.747 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.747 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.747 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075793': ['FBtr0330186']} 2021-10-25 09:33:22.747 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330186']] 2021-10-25 09:33:22.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052446: ['FBtr0078426', 'FBtr0330117'] 2021-10-25 09:33:22.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23723658, 23728666), (23723729, 23728666), (23728540, 23728666), (23729159, 23729936), (23729972, 23730648), (23730727, 23730793)] 2021-10-25 09:33:22.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(214942, 215033), (215676, 215772), (216007, 216076), (216275, 216344), (216573, 216631), (218885, 226115), (218885, 221505), (218885, 227371), (226508, 227371), (227547, 228132), (228281, 230537), (228281, 229172), (229382, 230537), (229382, 229929), (229977, 230537), (230627, 230757), (231034, 231947), (231034, 231962), (232101, 232291), (232379, 233996), (234174, 234236), (242143, 242243), (242744, 250756), (242925, 250756)] 2021-10-25 09:33:22.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (227371, 228281, 'FBtr0299837_exon_10') contains intron (227547, 228132) 2021-10-25 09:33:22.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000564: ['FBtr0083444', 'FBtr0334930'] 2021-10-25 09:33:22.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299837_exon_10'] 2021-10-25 09:33:22.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18167269, 18167343), (18167522, 18167657), (18167721, 18167772), (18168138, 18168207)] 2021-10-25 09:33:22.769 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18167254, 18167522, 'FBtr0300662_exon_1') contains intron (18167269, 18167343) 2021-10-25 09:33:22.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300662_exon_1'] 2021-10-25 09:33:22.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17447044, 17447245), (17447274, 17447350), (17447526, 17448766), (17447530, 17448766)] 2021-10-25 09:33:22.804 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21641195, 21641286), (21641362, 21641973)] 2021-10-25 09:33:22.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035696: ['FBtr0077010'] 2021-10-25 09:33:22.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035696 has a single transcript. 2021-10-25 09:33:22.817 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0078426': ['FBtr0330117']} 2021-10-25 09:33:22.818 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330117']] 2021-10-25 09:33:22.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035697: ['FBtr0077009'] 2021-10-25 09:33:22.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035697 has a single transcript. 2021-10-25 09:33:22.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032151: ['FBtr0079915', 'FBtr0079914', 'FBtr0079913', 'FBtr0079916', 'FBtr0079912', 'FBtr0303898', 'FBtr0331284'] 2021-10-25 09:33:22.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052447: ['FBtr0078461', 'FBtr0333969', 'FBtr0333970'] 2021-10-25 09:33:22.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035699: ['FBtr0077007'] 2021-10-25 09:33:22.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035699 has a single transcript. 2021-10-25 09:33:22.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035702: ['FBtr0076987', 'FBtr0333060'] 2021-10-25 09:33:22.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260393: ['FBtr0310467'] 2021-10-25 09:33:22.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260393 has a single transcript. 2021-10-25 09:33:22.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260396: ['FBtr0300668'] 2021-10-25 09:33:22.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260396 has a single transcript. 2021-10-25 09:33:22.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260397: ['FBtr0074825', 'FBtr0074826', 'FBtr0332693'] 2021-10-25 09:33:22.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000565: ['FBtr0075552', 'FBtr0075553', 'FBtr0075554', 'FBtr0330176', 'FBtr0330177', 'FBtr0303531'] 2021-10-25 09:33:22.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6487795, 6487855)] 2021-10-25 09:33:22.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21693721, 21694315), (21693721, 21704547), (21694504, 21704547), (21694567, 21704547)] 2021-10-25 09:33:22.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026378: ['FBtr0086462'] 2021-10-25 09:33:22.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026378 has a single transcript. 2021-10-25 09:33:22.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039110: ['FBtr0084468', 'FBtr0335003'] 2021-10-25 09:33:22.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026379: ['FBtr0089900', 'FBtr0089901', 'FBtr0089904', 'FBtr0089905', 'FBtr0089902', 'FBtr0300562', 'FBtr0301521'] 2021-10-25 09:33:22.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20226706, 20226772), (20227517, 20227577), (20228344, 20228416), (20228955, 20229072)] 2021-10-25 09:33:22.930 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20226380, 20228344, 'FBtr0074825_exon_1') contains intron (20226706, 20226772) 2021-10-25 09:33:22.930 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20226772, 20228344, 'FBtr0074826_exon_2') contains intron (20227517, 20227577) 2021-10-25 09:33:22.931 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074825_exon_1', 'FBtr0074826_exon_2'] 2021-10-25 09:33:22.931 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035703: ['FBtr0303036'] 2021-10-25 09:33:22.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035703 has a single transcript. 2021-10-25 09:33:22.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035704: ['FBtr0076986'] 2021-10-25 09:33:22.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035704 has a single transcript. 2021-10-25 09:33:22.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23752572, 23752703), (23752575, 23752703)] 2021-10-25 09:33:22.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035707: ['FBtr0076976', 'FBtr0076977'] 2021-10-25 09:33:22.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9797192, 9797678), (9797852, 9797911), (9798126, 9798195), (9798305, 9802350), (9798305, 9806443), (9802437, 9806443), (9802437, 9807309), (9806530, 9807309), (9807504, 9807881), (9807957, 9809221), (9809402, 9815802), (9815912, 9819286), (9815912, 9825296), (9819331, 9825612), (9819331, 9825296), (9825341, 9825612), (9825752, 9869531), (9870520, 9885931), (9870520, 9877101), (9870520, 9885725), (9878025, 9885931), (9878025, 9885725)] 2021-10-25 09:33:22.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6603893, 6603962), (6604184, 6606294), (6607078, 6607134)] 2021-10-25 09:33:22.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:22.995 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:22.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052448: ['FBtr0290247', 'FBtr0303248'] 2021-10-25 09:33:23.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039111: ['FBtr0084453', 'FBtr0084454'] 2021-10-25 09:33:23.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15511169, 15512171), (15511632, 15512171), (15512082, 15512171), (15512353, 15512475), (15512365, 15512475), (15512736, 15512795)] 2021-10-25 09:33:23.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15512171, 15512736, 'FBtr0075552_exon_2') contains intron (15512353, 15512475) 2021-10-25 09:33:23.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075552_exon_2'] 2021-10-25 09:33:23.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266564: ['FBtr0344670'] 2021-10-25 09:33:23.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266564 has a single transcript. 2021-10-25 09:33:23.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266565: ['FBtr0344671'] 2021-10-25 09:33:23.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266565 has a single transcript. 2021-10-25 09:33:23.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21828004, 21828070), (21828326, 21828451)] 2021-10-25 09:33:23.044 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075553': ['FBtr0330177']} 2021-10-25 09:33:23.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260398: ['FBtr0300658', 'FBtr0300659', 'FBtr0339298'] 2021-10-25 09:33:23.045 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330177']] 2021-10-25 09:33:23.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23758528, 23758774), (23758918, 23758977), (23759295, 23759357)] 2021-10-25 09:33:23.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266566: ['FBtr0344672', 'FBtr0344673', 'FBtr0344674', 'FBtr0344675', 'FBtr0344676', 'FBtr0344677', 'FBtr0345264', 'FBtr0345265'] 2021-10-25 09:33:23.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035708: ['FBtr0076978', 'FBtr0076980', 'FBtr0076981', 'FBtr0330184'] 2021-10-25 09:33:23.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10256506, 10256909), (10256506, 10257777), (10256506, 10257394), (10257122, 10257394), (10257716, 10257777), (10257993, 10258063), (10258173, 10258234), (10258397, 10258548), (10258656, 10258727), (10258915, 10259028), (10259173, 10259240), (10259413, 10259475), (10259690, 10260253), (10260584, 10260741), (10260584, 10260853)] 2021-10-25 09:33:23.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10260253, 10261049, 'FBtr0300562_exon_1') contains intron (10260584, 10260741) 2021-10-25 09:33:23.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300562_exon_1'] 2021-10-25 09:33:23.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052449: ['FBtr0078490'] 2021-10-25 09:33:23.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052449 has a single transcript. 2021-10-25 09:33:23.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8130273, 8130330), (8131172, 8131255)] 2021-10-25 09:33:23.109 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8129353, 8131323, 'FBtr0300658_exon_1') contains intron (8130273, 8130330) 2021-10-25 09:33:23.109 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8129353, 8131172, 'FBtr0300659_exon_2') contains intron (8130273, 8130330) 2021-10-25 09:33:23.110 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8130330, 8131323, 'FBtr0339298_exon_1') contains intron (8131172, 8131255) 2021-10-25 09:33:23.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300658_exon_1', 'FBtr0300659_exon_2', 'FBtr0339298_exon_1'] 2021-10-25 09:33:23.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039112: ['FBtr0084466'] 2021-10-25 09:33:23.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039112 has a single transcript. 2021-10-25 09:33:23.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052450: ['FBtr0078501'] 2021-10-25 09:33:23.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052450 has a single transcript. 2021-10-25 09:33:23.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039113: ['FBtr0084465', 'FBtr0084464'] 2021-10-25 09:33:23.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052451: ['FBtr0078531', 'FBtr0078532', 'FBtr0078533', 'FBtr0113437', 'FBtr0302134', 'FBtr0306600', 'FBtr0332105'] 2021-10-25 09:33:23.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6609508, 6615897), (6609909, 6615897), (6613652, 6615897), (6613821, 6615897), (6616596, 6616666), (6617315, 6617767)] 2021-10-25 09:33:23.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23761560, 23761618), (23762430, 23762548), (23762967, 23763056), (23763134, 23763229)] 2021-10-25 09:33:23.165 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23763056, 23763263, 'FBtr0084465_exon_1') contains intron (23763134, 23763229) 2021-10-25 09:33:23.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084465_exon_1'] 2021-10-25 09:33:23.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000566: ['FBtr0086710', 'FBtr0345422'] 2021-10-25 09:33:23.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260399: ['FBtr0083674', 'FBtr0331352'] 2021-10-25 09:33:23.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039114: ['FBtr0084455', 'FBtr0084456', 'FBtr0084457', 'FBtr0335002'] 2021-10-25 09:33:23.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15910963, 15911054), (15911818, 15912045), (15911818, 15912282), (15912170, 15912664), (15912170, 15914795), (15912170, 15914385), (15912439, 15914385), (15912439, 15912664), (15913951, 15914795), (15913951, 15914385), (15914503, 15914795), (15914880, 15914956), (15916345, 15916405), (15916616, 15917556)] 2021-10-25 09:33:23.246 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15910371, 15911818, 'FBtr0344674_exon_6') contains intron (15910963, 15911054) 2021-10-25 09:33:23.246 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15910371, 15911818, 'FBtr0344675_exon_6') contains intron (15910963, 15911054) 2021-10-25 09:33:23.247 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15910371, 15911818, 'FBtr0344676_exon_6') contains intron (15910963, 15911054) 2021-10-25 09:33:23.248 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15910371, 15911818, 'FBtr0344677_exon_6') contains intron (15910963, 15911054) 2021-10-25 09:33:23.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344674_exon_6', 'FBtr0344675_exon_6', 'FBtr0344676_exon_6', 'FBtr0344677_exon_6'] 2021-10-25 09:33:23.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.265 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:23.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.266 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032153: ['FBtr0113031'] 2021-10-25 09:33:23.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032153 has a single transcript. 2021-10-25 09:33:23.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18746721, 18747236), (18748070, 18748130), (18748289, 18748360), (18748289, 18748665), (18748489, 18748665), (18749668, 18749738)] 2021-10-25 09:33:23.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22749992, 22777110), (22760240, 22777110), (22760240, 22760788), (22760809, 22777110), (22773716, 22774737), (22773716, 22775314), (22773716, 22777110), (22774403, 22774737), (22775137, 22777110), (22775371, 22777110), (22778824, 22783419), (22778824, 22783064), (22783238, 22783419), (22783735, 22783787), (22784752, 22785259)] 2021-10-25 09:33:23.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032154: ['FBtr0079911'] 2021-10-25 09:33:23.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032154 has a single transcript. 2021-10-25 09:33:23.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032156: ['FBtr0079902', 'FBtr0079903', 'FBtr0290197', 'FBtr0300866', 'FBtr0300867', 'FBtr0300868', 'FBtr0300869', 'FBtr0300870', 'FBtr0300871'] 2021-10-25 09:33:23.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035709: ['FBtr0076963'] 2021-10-25 09:33:23.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035709 has a single transcript. 2021-10-25 09:33:23.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23764316, 23764385), (23764684, 23764748), (23764959, 23765100), (23764959, 23765511), (23765178, 23765511), (23765696, 23765875), (23766066, 23766129), (23766307, 23766373)] 2021-10-25 09:33:23.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035710: ['FBtr0076958', 'FBtr0076959', 'FBtr0076960', 'FBtr0076961'] 2021-10-25 09:33:23.317 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23764237, 23764684, 'FBtr0084457_exon_1') contains intron (23764316, 23764385) 2021-10-25 09:33:23.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084457_exon_1'] 2021-10-25 09:33:23.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000567: ['FBtr0075202', 'FBtr0075203', 'FBtr0075204', 'FBtr0100411', 'FBtr0305796'] 2021-10-25 09:33:23.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260400: ['FBtr0307173', 'FBtr0070091', 'FBtr0100254', 'FBtr0114366'] 2021-10-25 09:33:23.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026380: ['FBtr0082010'] 2021-10-25 09:33:23.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026380 has a single transcript. 2021-10-25 09:33:23.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6690327, 6690387), (6691171, 6691231), (6691389, 6691464), (6692304, 6692371), (6692590, 6703319), (6692590, 6702862), (6703229, 6703319)] 2021-10-25 09:33:23.403 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6702862, 6703521, 'FBtr0076959_exon_1') contains intron (6703229, 6703319) 2021-10-25 09:33:23.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076959_exon_1'] 2021-10-25 09:33:23.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026384: ['FBtr0072023'] 2021-10-25 09:33:23.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026384 has a single transcript. 2021-10-25 09:33:23.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026385: ['FBtr0088166'] 2021-10-25 09:33:23.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026385 has a single transcript. 2021-10-25 09:33:23.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026386: ['FBtr0088111'] 2021-10-25 09:33:23.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026386 has a single transcript. 2021-10-25 09:33:23.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(519242, 520076), (519242, 522985), (519242, 521439), (521696, 522985)] 2021-10-25 09:33:23.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026388: ['FBtr0088330', 'FBtr0088331'] 2021-10-25 09:33:23.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17562758, 17564605), (17564860, 17565356), (17565725, 17597459), (17565725, 17574792), (17597967, 17598186), (17598468, 17598820), (17599433, 17602674), (17603383, 17618650)] 2021-10-25 09:33:23.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039115: ['FBtr0084463'] 2021-10-25 09:33:23.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039115 has a single transcript. 2021-10-25 09:33:23.455 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075202': ['FBtr0075203', 'FBtr0305796']} 2021-10-25 09:33:23.456 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0075203', 'FBtr0305796']] 2021-10-25 09:33:23.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039116: ['FBtr0084458', 'FBtr0300681'] 2021-10-25 09:33:23.481 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10140254, 10140346), (10140435, 10140491), (10140666, 10141980), (10141919, 10141980)] 2021-10-25 09:33:23.482 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9903941, 9904003), (9904216, 9904281), (9904758, 9904826), (9905052, 9905137), (9905083, 9905874), (9905291, 9905874), (9905971, 9906032), (9906443, 9907050), (9907544, 9907607), (9907547, 9907607), (9907783, 9908307), (9907783, 9908424), (9907783, 9908531), (9907847, 9908424), (9907847, 9908531), (9907855, 9908424)] 2021-10-25 09:33:23.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23767870, 23768078), (23767870, 23768008), (23768329, 23768456)] 2021-10-25 09:33:23.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.510 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052452: ['FBtr0078523', 'FBtr0078524', 'FBtr0345591'] 2021-10-25 09:33:23.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026389: ['FBtr0089051'] 2021-10-25 09:33:23.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026389 has a single transcript. 2021-10-25 09:33:23.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000568: ['FBtr0075148', 'FBtr0075149', 'FBtr0075150', 'FBtr0075151', 'FBtr0306813', 'FBtr0306814', 'FBtr0347013'] 2021-10-25 09:33:23.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026390: ['FBtr0080280'] 2021-10-25 09:33:23.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026390 has a single transcript. 2021-10-25 09:33:23.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039117: ['FBtr0084462', 'FBtr0334895'] 2021-10-25 09:33:23.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026391: ['FBtr0080279'] 2021-10-25 09:33:23.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026391 has a single transcript. 2021-10-25 09:33:23.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260401: ['FBtr0300664'] 2021-10-25 09:33:23.573 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260401 has a single transcript. 2021-10-25 09:33:23.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026392: ['FBtr0080278'] 2021-10-25 09:33:23.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026392 has a single transcript. 2021-10-25 09:33:23.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035711: ['FBtr0076942', 'FBtr0333072'] 2021-10-25 09:33:23.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026393: ['FBtr0088887'] 2021-10-25 09:33:23.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026393 has a single transcript. 2021-10-25 09:33:23.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260407: ['FBtr0080566'] 2021-10-25 09:33:23.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260407 has a single transcript. 2021-10-25 09:33:23.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026394: ['FBtr0289965'] 2021-10-25 09:33:23.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026394 has a single transcript. 2021-10-25 09:33:23.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260428: ['FBtr0300851', 'FBtr0332499'] 2021-10-25 09:33:23.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026395: ['FBtr0077698'] 2021-10-25 09:33:23.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026395 has a single transcript. 2021-10-25 09:33:23.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026396: ['FBtr0077826'] 2021-10-25 09:33:23.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026396 has a single transcript. 2021-10-25 09:33:23.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266568: ['FBtr0303213', 'FBtr0308354', 'FBtr0308355', 'FBtr0308356', 'FBtr0308357', 'FBtr0308358', 'FBtr0308359', 'FBtr0308360'] 2021-10-25 09:33:23.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026397: ['FBtr0077874'] 2021-10-25 09:33:23.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026397 has a single transcript. 2021-10-25 09:33:23.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22717888, 22717974)] 2021-10-25 09:33:23.616 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22717727, 22719745, 'FBtr0078523_exon_1') contains intron (22717888, 22717974) 2021-10-25 09:33:23.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078523_exon_1'] 2021-10-25 09:33:23.617 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23769243, 23769308), (23770376, 23770440)] 2021-10-25 09:33:23.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026398: ['FBtr0077873'] 2021-10-25 09:33:23.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026398 has a single transcript. 2021-10-25 09:33:23.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026399: ['FBtr0310300'] 2021-10-25 09:33:23.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026399 has a single transcript. 2021-10-25 09:33:23.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026400: ['FBtr0085320'] 2021-10-25 09:33:23.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026400 has a single transcript. 2021-10-25 09:33:23.639 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4763621, 4763683)] 2021-10-25 09:33:23.640 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6705570, 6708348), (6707641, 6707694), (6707754, 6708348), (6708479, 6708539)] 2021-10-25 09:33:23.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026401: ['FBtr0111119', 'FBtr0111118', 'FBtr0334994', 'FBtr0301454', 'FBtr0301455', 'FBtr0301456'] 2021-10-25 09:33:23.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039118: ['FBtr0084461'] 2021-10-25 09:33:23.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039118 has a single transcript. 2021-10-25 09:33:23.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039120: ['FBtr0084460', 'FBtr0304567', 'FBtr0334894'] 2021-10-25 09:33:23.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260429: ['FBtr0340006', 'FBtr0300853', 'FBtr0304712'] 2021-10-25 09:33:23.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035713: ['FBtr0076950', 'FBtr0076951', 'FBtr0076952', 'FBtr0345025'] 2021-10-25 09:33:23.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052453: ['FBtr0078521', 'FBtr0344813'] 2021-10-25 09:33:23.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17955049, 17955214), (17956223, 17959381), (17959620, 17969362), (17959620, 17961004), (17969507, 17969643), (17969507, 17992907), (17992996, 17998422), (17992996, 18058236), (17992996, 18025330), (18060274, 18060421), (18060550, 18060945), (18060854, 18064510)] 2021-10-25 09:33:23.732 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23774990, 23775054), (23775464, 23775521), (23776533, 23776592), (23776875, 23776931), (23777107, 23777437), (23777620, 23777688), (23778207, 23778286), (23780824, 23780884)] 2021-10-25 09:33:23.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15615300, 15630709), (15630780, 15637759), (15637935, 15650020), (15650070, 15650173), (15650070, 15656791)] 2021-10-25 09:33:23.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15650020, 15650310, 'FBtr0300853_exon_4') contains intron (15650070, 15650173) 2021-10-25 09:33:23.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300853_exon_4'] 2021-10-25 09:33:23.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:23.781 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4692010, 4692078), (4692246, 4692295), (4692950, 4693010), (4693168, 4693247), (4693483, 4695118), (4695406, 4695461), (4695610, 4698502), (4698996, 4699058), (4699151, 4700388), (4700583, 4700643), (4700872, 4700939), (4701261, 4711813), (4712045, 4712100), (4712775, 4719769), (4720210, 4722146), (4722325, 4726623), (4726788, 4726847), (4727085, 4727157), (4727734, 4727793), (4727953, 4728008), (4727953, 4728432), (4728124, 4728179), (4728351, 4728432), (4728551, 4728813), (4728551, 4728806), (4728551, 4728778)] 2021-10-25 09:33:23.803 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4726847, 4727734, 'FBtr0111119_exon_6') contains intron (4727085, 4727157) 2021-10-25 09:33:23.803 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4726847, 4727734, 'FBtr0111118_exon_6') contains intron (4727085, 4727157) 2021-10-25 09:33:23.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111119_exon_6', 'FBtr0111118_exon_6'] 2021-10-25 09:33:23.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6744968, 6745030), (6746487, 6746561), (6746778, 6746870), (6746989, 6747101), (6746989, 6747858), (6747970, 6748036), (6750484, 6750558), (6751296, 6751352), (6751443, 6752159), (6751443, 6752144)] 2021-10-25 09:33:23.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.829 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(362439, 363633), (362874, 366707), (362874, 363710), (362874, 365995), (362874, 363821), (362874, 366663), (364111, 365995), (366322, 366387), (366322, 366663), (366322, 366707)] 2021-10-25 09:33:23.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.831 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052457: ['FBtr0300619', 'FBtr0300620'] 2021-10-25 09:33:23.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039124: ['FBtr0084525'] 2021-10-25 09:33:23.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039124 has a single transcript. 2021-10-25 09:33:23.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039125: ['FBtr0084491'] 2021-10-25 09:33:23.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039125 has a single transcript. 2021-10-25 09:33:23.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260430: ['FBtr0300854', 'FBtr0332100'] 2021-10-25 09:33:23.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039126: ['FBtr0084522', 'FBtr0330369'] 2021-10-25 09:33:23.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22987792, 22987858)] 2021-10-25 09:33:23.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22987641, 22988262, 'FBtr0300619_exon_1') contains intron (22987792, 22987858) 2021-10-25 09:33:23.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300619_exon_1'] 2021-10-25 09:33:23.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032157: ['FBtr0079901'] 2021-10-25 09:33:23.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032157 has a single transcript. 2021-10-25 09:33:23.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032160: ['FBtr0079877', 'FBtr0332505'] 2021-10-25 09:33:23.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23926942, 23927001), (23927144, 23927202), (23927371, 23927426)] 2021-10-25 09:33:23.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3188331, 3188388), (3189115, 3189335), (3189241, 3189335), (3189384, 3189441), (3189654, 3189708)] 2021-10-25 09:33:23.943 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:23.943 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:23.948 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084522': ['FBtr0330369']} 2021-10-25 09:33:23.949 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330369']] 2021-10-25 09:33:23.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039128: ['FBtr0084493'] 2021-10-25 09:33:23.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039128 has a single transcript. 2021-10-25 09:33:23.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039129: ['FBtr0084519', 'FBtr0332444'] 2021-10-25 09:33:23.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052459: ['FBtr0078578'] 2021-10-25 09:33:23.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052459 has a single transcript. 2021-10-25 09:33:23.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052460: ['FBtr0078580'] 2021-10-25 09:33:23.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052460 has a single transcript. 2021-10-25 09:33:23.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052461: ['FBtr0078567'] 2021-10-25 09:33:23.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052461 has a single transcript. 2021-10-25 09:33:24.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23933019, 23933089), (23933403, 23933476), (23933410, 23933476)] 2021-10-25 09:33:24.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9918707, 9918874), (9919108, 9919169), (9919316, 9919375)] 2021-10-25 09:33:24.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052462: ['FBtr0078579'] 2021-10-25 09:33:24.005 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052462 has a single transcript. 2021-10-25 09:33:24.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035714: ['FBtr0076943', 'FBtr0330060'] 2021-10-25 09:33:24.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052463: ['FBtr0077808'] 2021-10-25 09:33:24.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052463 has a single transcript. 2021-10-25 09:33:24.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260431: ['FBtr0300855'] 2021-10-25 09:33:24.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260431 has a single transcript. 2021-10-25 09:33:24.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052473: ['FBtr0082742', 'FBtr0082743', 'FBtr0082744'] 2021-10-25 09:33:24.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260434: ['FBtr0300858'] 2021-10-25 09:33:24.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260434 has a single transcript. 2021-10-25 09:33:24.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260435: ['FBtr0302459'] 2021-10-25 09:33:24.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260435 has a single transcript. 2021-10-25 09:33:24.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260436: ['FBtr0300859', 'FBtr0310322'] 2021-10-25 09:33:24.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6753237, 6753317)] 2021-10-25 09:33:24.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026402: ['FBtr0087058'] 2021-10-25 09:33:24.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026402 has a single transcript. 2021-10-25 09:33:24.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039130: ['FBtr0084494'] 2021-10-25 09:33:24.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000575: ['FBtr0072578'] 2021-10-25 09:33:24.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000575 has a single transcript. 2021-10-25 09:33:24.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039130 has a single transcript. 2021-10-25 09:33:24.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032161: ['FBtr0079878', 'FBtr0331631'] 2021-10-25 09:33:24.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11864306, 11864371), (11864454, 11864556), (11864454, 11864518), (11864657, 11864709)] 2021-10-25 09:33:24.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.098 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000576: ['FBtr0082863'] 2021-10-25 09:33:24.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000576 has a single transcript. 2021-10-25 09:33:24.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039131: ['FBtr0084513', 'FBtr0084514', 'FBtr0308071'] 2021-10-25 09:33:24.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026403: ['FBtr0088349', 'FBtr0339459'] 2021-10-25 09:33:24.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000577: ['FBtr0088095', 'FBtr0088096'] 2021-10-25 09:33:24.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13302734, 13302797), (13303180, 13304125), (13304496, 13310145), (13305070, 13308495), (13308904, 13309468), (13309955, 13310145), (13311108, 13311173), (13311317, 13311403), (13311895, 13311952)] 2021-10-25 09:33:24.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035715: ['FBtr0076949', 'FBtr0330061', 'FBtr0330062', 'FBtr0330063', 'FBtr0330064', 'FBtr0330065'] 2021-10-25 09:33:24.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10314504, 10316400), (10316880, 10316975), (10317737, 10317843), (10318467, 10318727), (10318998, 10319061), (10319207, 10319267), (10319677, 10319870), (10320028, 10320572), (10320827, 10320883), (10321058, 10321120), (10321405, 10321468)] 2021-10-25 09:33:24.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9920228, 9920324), (9920232, 9920324), (9920601, 9920653), (9920800, 9920853)] 2021-10-25 09:33:24.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.145 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11524847, 11525127), (11525225, 11526358)] 2021-10-25 09:33:24.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260437: ['FBtr0300860'] 2021-10-25 09:33:24.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260437 has a single transcript. 2021-10-25 09:33:24.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23944106, 23944164), (23944615, 23944684), (23944794, 23945016), (23945411, 23946608), (23946844, 23948190), (23946844, 23948338), (23946862, 23948338)] 2021-10-25 09:33:24.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260439: ['FBtr0005088', 'FBtr0100533', 'FBtr0100535', 'FBtr0339789', 'FBtr0306102'] 2021-10-25 09:33:24.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266569: ['FBtr0299571', 'FBtr0305650'] 2021-10-25 09:33:24.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026404: ['FBtr0076347'] 2021-10-25 09:33:24.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026404 has a single transcript. 2021-10-25 09:33:24.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032162: ['FBtr0079879', 'FBtr0331632'] 2021-10-25 09:33:24.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026409: ['FBtr0075718', 'FBtr0075719', 'FBtr0308595'] 2021-10-25 09:33:24.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000578: ['FBtr0086584', 'FBtr0086583', 'FBtr0086582', 'FBtr0100174', 'FBtr0100176', 'FBtr0114623', 'FBtr0340450'] 2021-10-25 09:33:24.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052475: ['FBtr0072462', 'FBtr0329896'] 2021-10-25 09:33:24.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1046560, 1046635)] 2021-10-25 09:33:24.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.245 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9921995, 9922063), (9922210, 9922265)] 2021-10-25 09:33:24.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6754457, 6755072), (6754493, 6754744), (6754493, 6755072), (6754493, 6755419), (6754807, 6755072), (6754807, 6755419), (6754936, 6755072), (6755123, 6755419), (6756158, 6756222)] 2021-10-25 09:33:24.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.263 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22482, 22543), (24696, 24751), (24908, 25088), (25280, 25340), (25559, 25618), (25976, 26029)] 2021-10-25 09:33:24.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14537702, 14538003), (14537834, 14538003), (14537848, 14538003), (14538421, 14538728), (14539069, 14539552)] 2021-10-25 09:33:24.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266570: ['FBtr0070648', 'FBtr0340200'] 2021-10-25 09:33:24.308 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8366081, 8366137), (8366123, 8366192), (8366394, 8367095), (8367249, 8367311), (8367730, 8367796), (8367871, 8367930), (8368696, 8368757), (8369030, 8369715), (8369030, 8369222), (8369399, 8369715), (8369560, 8369715)] 2021-10-25 09:33:24.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039132: ['FBtr0084496', 'FBtr0305039', 'FBtr0305040', 'FBtr0335244'] 2021-10-25 09:33:24.309 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8366037, 8366394, 'FBtr0005088_exon_1') contains intron (8366081, 8366137) 2021-10-25 09:33:24.310 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8366037, 8366394, 'FBtr0339789_exon_1') contains intron (8366081, 8366137) 2021-10-25 09:33:24.310 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8366037, 8366394, 'FBtr0306102_exon_1') contains intron (8366081, 8366137) 2021-10-25 09:33:24.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0005088_exon_1', 'FBtr0339789_exon_1', 'FBtr0306102_exon_1'] 2021-10-25 09:33:24.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052476: ['FBtr0072501'] 2021-10-25 09:33:24.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052476 has a single transcript. 2021-10-25 09:33:24.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052479: ['FBtr0072589', 'FBtr0333266', 'FBtr0333267'] 2021-10-25 09:33:24.370 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4319503, 4319569), (4319503, 4319565)] 2021-10-25 09:33:24.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23958798, 23959031), (23959210, 23959279), (23959388, 23959455), (23959593, 23959892), (23959593, 23960897), (23959593, 23962050)] 2021-10-25 09:33:24.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(872233, 873307), (872979, 873307), (873875, 873990), (874881, 874949), (875199, 888296), (888245, 888296), (890175, 890547), (890803, 890864), (890948, 891006), (891174, 891547), (891776, 891834)] 2021-10-25 09:33:24.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026411: ['FBtr0071279', 'FBtr0331732'] 2021-10-25 09:33:24.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19141770, 19142206), (19141846, 19142206), (19142354, 19151904), (19152027, 19158733), (19155914, 19158733), (19156367, 19158733), (19159055, 19159119), (19159352, 19159794), (19159352, 19159782), (19160035, 19160179), (19160035, 19160248), (19160035, 19160176), (19160902, 19160973), (19161132, 19161193), (19161415, 19161472), (19161415, 19161475), (19161593, 19161659)] 2021-10-25 09:33:24.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19141631, 19142354, 'FBtr0086582_exon_1') contains intron (19141770, 19142206) 2021-10-25 09:33:24.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086582_exon_1'] 2021-10-25 09:33:24.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266572: ['FBtr0070098', 'FBtr0339442', 'FBtr0339443'] 2021-10-25 09:33:24.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8758404, 8758694), (8758956, 8768055), (8768274, 8768751), (8768942, 8785183), (8768942, 8787609), (8787836, 8788733), (8788929, 8804963)] 2021-10-25 09:33:24.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032163: ['FBtr0079898'] 2021-10-25 09:33:24.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032163 has a single transcript. 2021-10-25 09:33:24.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032166: ['FBtr0079883', 'FBtr0300550'] 2021-10-25 09:33:24.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035718: ['FBtr0076894'] 2021-10-25 09:33:24.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035718 has a single transcript. 2021-10-25 09:33:24.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(471911, 472125), (471932, 472125), (472561, 472641), (472851, 472919), (473089, 473155), (473705, 473763), (474200, 474309), (474218, 474309), (474506, 474697), (475080, 475157), (475313, 475768), (476292, 476393)] 2021-10-25 09:33:24.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035719: ['FBtr0113150', 'FBtr0333077', 'FBtr0333078', 'FBtr0333079', 'FBtr0333080'] 2021-10-25 09:33:24.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026415: ['FBtr0071393', 'FBtr0071394', 'FBtr0343030'] 2021-10-25 09:33:24.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052480: ['FBtr0072579'] 2021-10-25 09:33:24.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052480 has a single transcript. 2021-10-25 09:33:24.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260440: ['FBtr0085651'] 2021-10-25 09:33:24.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260440 has a single transcript. 2021-10-25 09:33:24.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9940568, 9940628)] 2021-10-25 09:33:24.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052481: ['FBtr0072580'] 2021-10-25 09:33:24.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052481 has a single transcript. 2021-10-25 09:33:24.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260441: ['FBtr0075878'] 2021-10-25 09:33:24.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260441 has a single transcript. 2021-10-25 09:33:24.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052482: ['FBtr0072600'] 2021-10-25 09:33:24.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052482 has a single transcript. 2021-10-25 09:33:24.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052483: ['FBtr0072608'] 2021-10-25 09:33:24.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052483 has a single transcript. 2021-10-25 09:33:24.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260442: ['FBtr0305210', 'FBtr0305211', 'FBtr0305212', 'FBtr0333105', 'FBtr0333106', 'FBtr0333107', 'FBtr0333108', 'FBtr0333109'] 2021-10-25 09:33:24.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052484: ['FBtr0072984'] 2021-10-25 09:33:24.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052484 has a single transcript. 2021-10-25 09:33:24.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052485: ['FBtr0072985'] 2021-10-25 09:33:24.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052485 has a single transcript. 2021-10-25 09:33:24.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052487: ['FBtr0073007'] 2021-10-25 09:33:24.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052487 has a single transcript. 2021-10-25 09:33:24.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052488: ['FBtr0073008', 'FBtr0346075'] 2021-10-25 09:33:24.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039135: ['FBtr0084510'] 2021-10-25 09:33:24.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039135 has a single transcript. 2021-10-25 09:33:24.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039136: ['FBtr0084501', 'FBtr0084502', 'FBtr0301165'] 2021-10-25 09:33:24.604 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9929057, 9929171), (9929732, 9930354), (9930474, 9930907), (9930474, 9930880)] 2021-10-25 09:33:24.605 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032167: ['FBtr0079894', 'FBtr0331635', 'FBtr0345615'] 2021-10-25 09:33:24.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3015241, 3015305)] 2021-10-25 09:33:24.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266573: ['FBtr0344696'] 2021-10-25 09:33:24.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266573 has a single transcript. 2021-10-25 09:33:24.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266574: ['FBtr0344697'] 2021-10-25 09:33:24.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266574 has a single transcript. 2021-10-25 09:33:24.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6943006, 6944431), (6943101, 6944431), (6944769, 6946263), (6946447, 6946500), (6946447, 6946515), (6946558, 6947247), (6947915, 6947970), (6947915, 6947985), (6948109, 6948277)] 2021-10-25 09:33:24.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266577: ['FBtr0344724', 'FBtr0344725'] 2021-10-25 09:33:24.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23986715, 23987031), (23986946, 23987031), (23987210, 23987269), (23987210, 23987266)] 2021-10-25 09:33:24.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9941058, 9941118), (9941480, 9941538), (9941639, 9941699), (9942110, 9942168), (9942407, 9942474), (9942620, 9942680), (9942817, 9942882), (9943053, 9944294), (9944681, 9947291), (9944681, 9947265)] 2021-10-25 09:33:24.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052493: ['FBtr0070533'] 2021-10-25 09:33:24.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052493 has a single transcript. 2021-10-25 09:33:24.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.684 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052495: ['FBtr0089800', 'FBtr0340370', 'FBtr0300975', 'FBtr0300976', 'FBtr0300977', 'FBtr0300978', 'FBtr0300979'] 2021-10-25 09:33:24.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7783381, 7783482), (7783397, 7783482)] 2021-10-25 09:33:24.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026417: ['FBtr0078876', 'FBtr0334904'] 2021-10-25 09:33:24.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000579: ['FBtr0077905', 'FBtr0077906', 'FBtr0077907', 'FBtr0077908', 'FBtr0077909', 'FBtr0302115'] 2021-10-25 09:33:24.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8545089, 8555730), (8546875, 8555730), (8555971, 8561358), (8555981, 8561358), (8558646, 8561358), (8560322, 8561358), (8561617, 8561686), (8562085, 8562144), (8562336, 8562395), (8562474, 8562532), (8563036, 8563099), (8563188, 8563881), (8563188, 8563545), (8563634, 8563881), (8563634, 8563978), (8563907, 8563978), (8564095, 8564156), (8568744, 8568810), (8569001, 8570967), (8569001, 8570308), (8571084, 8571145), (8571661, 8572017), (8572677, 8572897), (8572677, 8573338), (8573472, 8573530)] 2021-10-25 09:33:24.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039137: ['FBtr0084509', 'FBtr0113275', 'FBtr0113276', 'FBtr0113277', 'FBtr0330370'] 2021-10-25 09:33:24.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.765 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4809274, 4810671), (4809274, 4811982), (4810787, 4811982)] 2021-10-25 09:33:24.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266578: ['FBtr0344731'] 2021-10-25 09:33:24.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266578 has a single transcript. 2021-10-25 09:33:24.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266579: ['FBtr0344741', 'FBtr0344742', 'FBtr0344743', 'FBtr0344744', 'FBtr0344745', 'FBtr0344746', 'FBtr0344747', 'FBtr0344748', 'FBtr0344749', 'FBtr0344750', 'FBtr0344751', 'FBtr0344752', 'FBtr0347394'] 2021-10-25 09:33:24.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032168: ['FBtr0079892', 'FBtr0343747'] 2021-10-25 09:33:24.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026418: ['FBtr0075771', 'FBtr0075772', 'FBtr0075773', 'FBtr0304034', 'FBtr0304035', 'FBtr0304036', 'FBtr0304037', 'FBtr0333051'] 2021-10-25 09:33:24.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9952698, 9952757), (9953047, 9953109)] 2021-10-25 09:33:24.847 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035720: ['FBtr0076940', 'FBtr0300937', 'FBtr0333083'] 2021-10-25 09:33:24.857 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17899950, 17900080), (17900304, 17900615), (17900828, 17902606), (17900828, 17901742), (17900828, 17903947), (17900828, 17904609), (17902089, 17904609), (17902089, 17902606), (17904081, 17904609), (17904652, 17904797), (17905036, 17905112), (17905497, 17905574)] 2021-10-25 09:33:24.858 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.858 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23989710, 23989770), (23990652, 23990714), (23991027, 23991085), (23991255, 23992046), (23991255, 23991773), (23991875, 23992046), (23992242, 23992297), (23992538, 23992683)] 2021-10-25 09:33:24.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.896 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084509': ['FBtr0330370']} 2021-10-25 09:33:24.896 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330370']] 2021-10-25 09:33:24.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1726655, 1726752), (1726655, 1727645), (1727880, 1728053), (1728232, 1729549), (1728232, 1729274), (1728232, 1728361), (1728232, 1728302)] 2021-10-25 09:33:24.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032169: ['FBtr0079884', 'FBtr0343737'] 2021-10-25 09:33:24.911 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6951202, 6951266), (6951445, 6953772), (6955169, 6955380), (6955496, 6955752), (6955496, 6955765)] 2021-10-25 09:33:24.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:24.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9954534, 9954595), (9955513, 9955573)] 2021-10-25 09:33:24.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:24.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035721: ['FBtr0076896', 'FBtr0333081', 'FBtr0333082'] 2021-10-25 09:33:25.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14037111, 14037477), (14037111, 14037480), (14037136, 14037477), (14037136, 14037480), (14037412, 14037477), (14037750, 14039047), (14039999, 14040063), (14040594, 14041426), (14040594, 14042158), (14041522, 14042158), (14042359, 14042447)] 2021-10-25 09:33:25.027 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14037254, 14037750, 'FBtr0075773_exon_1') contains intron (14037412, 14037477) 2021-10-25 09:33:25.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075773_exon_1'] 2021-10-25 09:33:25.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032170: ['FBtr0079886', 'FBtr0079887', 'FBtr0079885', 'FBtr0343738', 'FBtr0343739'] 2021-10-25 09:33:25.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039139: ['FBtr0084532'] 2021-10-25 09:33:25.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039139 has a single transcript. 2021-10-25 09:33:25.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039140: ['FBtr0084595', 'FBtr0084596', 'FBtr0321262', 'FBtr0303849'] 2021-10-25 09:33:25.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6956162, 6956232), (6956397, 6956453)] 2021-10-25 09:33:25.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6956150, 6956397, 'FBtr0076896_exon_1') contains intron (6956162, 6956232) 2021-10-25 09:33:25.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6955990, 6956397, 'FBtr0333081_exon_1') contains intron (6956162, 6956232) 2021-10-25 09:33:25.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076896_exon_1', 'FBtr0333081_exon_1'] 2021-10-25 09:33:25.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260444: ['FBtr0082643', 'FBtr0445304'] 2021-10-25 09:33:25.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24035029, 24035263), (24035029, 24035613), (24035029, 24035287), (24035326, 24035613), (24036818, 24036930), (24038004, 24038066)] 2021-10-25 09:33:25.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27640296, 27645224), (27640296, 27643814), (27640296, 27646040), (27641494, 27641841), (27641494, 27645224), (27641494, 27643814), (27642057, 27643814), (27642938, 27643814), (27643973, 27644404), (27643973, 27645224), (27644422, 27645224), (27645410, 27646040), (27646243, 27646335), (27646525, 27647564), (27646525, 27646596), (27646698, 27647098), (27647608, 27647749), (27647608, 27656205), (27649707, 27649802), (27649902, 27650692), (27651606, 27656205)] 2021-10-25 09:33:25.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9957329, 9957428), (9957329, 9957402), (9957900, 9957959), (9958885, 9958939), (9959111, 9959549)] 2021-10-25 09:33:25.138 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9957294, 9957900, 'FBtr0079885_exon_1') contains intron (9957329, 9957428) 2021-10-25 09:33:25.138 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9957131, 9957900, 'FBtr0343738_exon_1') contains intron (9957329, 9957428) 2021-10-25 09:33:25.138 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9957294, 9957900, 'FBtr0343739_exon_1') contains intron (9957329, 9957428) 2021-10-25 09:33:25.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079885_exon_1', 'FBtr0343738_exon_1', 'FBtr0343739_exon_1'] 2021-10-25 09:33:25.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052496: ['FBtr0074499'] 2021-10-25 09:33:25.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052496 has a single transcript. 2021-10-25 09:33:25.139 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052499: ['FBtr0077362'] 2021-10-25 09:33:25.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052499 has a single transcript. 2021-10-25 09:33:25.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000581: ['FBtr0088139', 'FBtr0088140', 'FBtr0330621', 'FBtr0330622', 'FBtr0330623'] 2021-10-25 09:33:25.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052506: ['FBtr0307539', 'FBtr0340401'] 2021-10-25 09:33:25.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035722: ['FBtr0076939'] 2021-10-25 09:33:25.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035722 has a single transcript. 2021-10-25 09:33:25.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035724: ['FBtr0076937'] 2021-10-25 09:33:25.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035724 has a single transcript. 2021-10-25 09:33:25.180 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12630803, 12630877), (12631633, 12631693), (12632021, 12632117), (12632176, 12632234), (12632585, 12632650)] 2021-10-25 09:33:25.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035725: ['FBtr0076936'] 2021-10-25 09:33:25.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035725 has a single transcript. 2021-10-25 09:33:25.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035726: ['FBtr0076898'] 2021-10-25 09:33:25.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035726 has a single transcript. 2021-10-25 09:33:25.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20449963, 20461145), (20461596, 20461650), (20461870, 20462003), (20462727, 20462801), (20463131, 20463186), (20464238, 20464793), (20465098, 20465153), (20465431, 20465499)] 2021-10-25 09:33:25.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035727: ['FBtr0076935'] 2021-10-25 09:33:25.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035727 has a single transcript. 2021-10-25 09:33:25.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035730: ['FBtr0076932'] 2021-10-25 09:33:25.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035730 has a single transcript. 2021-10-25 09:33:25.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035733: ['FBtr0076931', 'FBtr0333376'] 2021-10-25 09:33:25.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260446: ['FBtr0304731', 'FBtr0304732'] 2021-10-25 09:33:25.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11452383, 11453392), (11452880, 11453392), (11452885, 11453392), (11454469, 11454533), (11454669, 11454824), (11455063, 11455132), (11455287, 11455587), (11455755, 11455819), (11455790, 11456366), (11456001, 11456366), (11456734, 11456804), (11456920, 11456987), (11460319, 11460590)] 2021-10-25 09:33:25.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7060740, 7060853), (7061037, 7061849), (7062043, 7062356), (7063150, 7077181)] 2021-10-25 09:33:25.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052507: ['FBtr0302987'] 2021-10-25 09:33:25.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052507 has a single transcript. 2021-10-25 09:33:25.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052511: ['FBtr0307579'] 2021-10-25 09:33:25.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052511 has a single transcript. 2021-10-25 09:33:25.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052512: ['FBtr0077262', 'FBtr0340438', 'FBtr0332847', 'FBtr0332848'] 2021-10-25 09:33:25.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15017396, 15021091), (15021346, 15025389), (15025524, 15025614), (15025785, 15025846), (15026063, 15026155), (15026321, 15026384), (15026628, 15026687), (15026837, 15029588), (15029731, 15029789), (15029913, 15029984), (15030101, 15030164), (15030372, 15030429), (15030686, 15030746), (15030884, 15032002), (15032183, 15032634)] 2021-10-25 09:33:25.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039141: ['FBtr0084533', 'FBtr0084534', 'FBtr0321260', 'FBtr0346099', 'FBtr0445310', 'FBtr0445311'] 2021-10-25 09:33:25.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032171: ['FBtr0079891', 'FBtr0346717'] 2021-10-25 09:33:25.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035734: ['FBtr0076905', 'FBtr0076906', 'FBtr0076908'] 2021-10-25 09:33:25.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026427: ['FBtr0087501', 'FBtr0087502'] 2021-10-25 09:33:25.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260447: ['FBtr0299927'] 2021-10-25 09:33:25.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260447 has a single transcript. 2021-10-25 09:33:25.376 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260450: ['FBtr0074226'] 2021-10-25 09:33:25.376 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260450 has a single transcript. 2021-10-25 09:33:25.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21063415, 21063801), (21064043, 21066599), (21064043, 21064450), (21064043, 21064143)] 2021-10-25 09:33:25.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9957058, 9957132)] 2021-10-25 09:33:25.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260451: ['FBtr0110983', 'FBtr0110984', 'FBtr0346510'] 2021-10-25 09:33:25.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14607833, 14607897), (14611484, 14611619), (14611691, 14611780), (14611691, 14616842), (14616400, 14616509), (14616761, 14616842), (14616986, 14617045), (14617360, 14617427), (14617745, 14617817)] 2021-10-25 09:33:25.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7066726, 7067554), (7066726, 7066860), (7066967, 7067554), (7067779, 7068003)] 2021-10-25 09:33:25.426 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7066313, 7066967, 'FBtr0076908_exon_1') contains intron (7066726, 7066860) 2021-10-25 09:33:25.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076908_exon_1'] 2021-10-25 09:33:25.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5039740, 5039808), (5040027, 5040119)] 2021-10-25 09:33:25.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5039808, 5040818, 'FBtr0110984_exon_2') contains intron (5040027, 5040119) 2021-10-25 09:33:25.443 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110984_exon_2'] 2021-10-25 09:33:25.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24039262, 24039594), (24039765, 24039910), (24039765, 24040305), (24040096, 24040305), (24040472, 24040567), (24040820, 24040878)] 2021-10-25 09:33:25.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032172: ['FBtr0079890', 'FBtr0309209', 'FBtr0309210', 'FBtr0309211', 'FBtr0329986', 'FBtr0303901'] 2021-10-25 09:33:25.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000588: ['FBtr0080325'] 2021-10-25 09:33:25.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000588 has a single transcript. 2021-10-25 09:33:25.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026428: ['FBtr0074008', 'FBtr0074009', 'FBtr0074010', 'FBtr0330405', 'FBtr0301774', 'FBtr0307383', 'FBtr0307384'] 2021-10-25 09:33:25.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000591: ['FBtr0084961'] 2021-10-25 09:33:25.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000591 has a single transcript. 2021-10-25 09:33:25.478 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0321260': ['FBtr0445311']} 2021-10-25 09:33:25.478 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0445311']] 2021-10-25 09:33:25.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000592: ['FBtr0076003', 'FBtr0333383'] 2021-10-25 09:33:25.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052518: ['FBtr0077238'] 2021-10-25 09:33:25.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052518 has a single transcript. 2021-10-25 09:33:25.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052520: ['FBtr0089301'] 2021-10-25 09:33:25.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052520 has a single transcript. 2021-10-25 09:33:25.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12190245, 12190296)] 2021-10-25 09:33:25.558 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.558 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035735: ['FBtr0076929'] 2021-10-25 09:33:25.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035735 has a single transcript. 2021-10-25 09:33:25.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052521: ['FBtr0077236', 'FBtr0077234', 'FBtr0077235', 'FBtr0310652', 'FBtr0310653', 'FBtr0310654', 'FBtr0331813', 'FBtr0331814', 'FBtr0331815'] 2021-10-25 09:33:25.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035736: ['FBtr0076928'] 2021-10-25 09:33:25.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035736 has a single transcript. 2021-10-25 09:33:25.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035737: ['FBtr0076909'] 2021-10-25 09:33:25.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035737 has a single transcript. 2021-10-25 09:33:25.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260452: ['FBtr0079247'] 2021-10-25 09:33:25.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260452 has a single transcript. 2021-10-25 09:33:25.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035741: ['FBtr0076912'] 2021-10-25 09:33:25.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035741 has a single transcript. 2021-10-25 09:33:25.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035742: ['FBtr0076925'] 2021-10-25 09:33:25.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035742 has a single transcript. 2021-10-25 09:33:25.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260453: ['FBtr0100837', 'FBtr0100838'] 2021-10-25 09:33:25.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035743: ['FBtr0076913', 'FBtr0345590'] 2021-10-25 09:33:25.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000594: ['FBtr0076004'] 2021-10-25 09:33:25.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000594 has a single transcript. 2021-10-25 09:33:25.637 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10843381, 10843439), (10843670, 10843738), (10844750, 10844805), (10845036, 10845108)] 2021-10-25 09:33:25.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000606: ['FBtr0088390'] 2021-10-25 09:33:25.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9961614, 9961728), (9961614, 9961794), (9961617, 9961728), (9961617, 9961794), (9962059, 9962317), (9962414, 9962470), (9962677, 9962734), (9963012, 9963092)] 2021-10-25 09:33:25.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000606 has a single transcript. 2021-10-25 09:33:25.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.640 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000611: ['FBtr0074137', 'FBtr0074135', 'FBtr0333322', 'FBtr0333323'] 2021-10-25 09:33:25.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7128960, 7129034)] 2021-10-25 09:33:25.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.655 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079890': ['FBtr0329986']} 2021-10-25 09:33:25.656 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329986']] 2021-10-25 09:33:25.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039145: ['FBtr0343101', 'FBtr0334920'] 2021-10-25 09:33:25.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260454: ['FBtr0100836'] 2021-10-25 09:33:25.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260454 has a single transcript. 2021-10-25 09:33:25.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15334063, 15334989), (15334307, 15334989), (15334674, 15334989), (15335268, 15335349), (15335480, 15335545), (15335729, 15336289), (15336561, 15336614), (15338022, 15338071), (15338665, 15339626), (15338704, 15338836), (15338924, 15339626)] 2021-10-25 09:33:25.701 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15334477, 15335268, 'FBtr0074009_exon_1') contains intron (15334674, 15334989) 2021-10-25 09:33:25.709 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074009_exon_1'] 2021-10-25 09:33:25.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260455: ['FBtr0072109'] 2021-10-25 09:33:25.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260455 has a single transcript. 2021-10-25 09:33:25.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035750: ['FBtr0076833', 'FBtr0333366'] 2021-10-25 09:33:25.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260456: ['FBtr0072332'] 2021-10-25 09:33:25.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260456 has a single transcript. 2021-10-25 09:33:25.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266580: ['FBtr0086044', 'FBtr0335270'] 2021-10-25 09:33:25.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260458: ['FBtr0091710', 'FBtr0091709', 'FBtr0091711', 'FBtr0114577'] 2021-10-25 09:33:25.735 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074008': ['FBtr0330405']} 2021-10-25 09:33:25.735 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330405']] 2021-10-25 09:33:25.749 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15992661, 15993471), (15992854, 15993471), (15992924, 15993471), (15993113, 15993471), (15993773, 15993964), (15994283, 15994346), (15994605, 15994684)] 2021-10-25 09:33:25.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:25.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7235301, 7235430)] 2021-10-25 09:33:25.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5761062, 5761133), (5762193, 5762593), (5763961, 5764020), (5764771, 5764830), (5765148, 5765487), (5765619, 5765679), (5765879, 5765939), (5766203, 5766452), (5766578, 5766690), (5766796, 5767284), (5767406, 5767462), (5767561, 5767619), (5767853, 5767913), (5768060, 5769342), (5769495, 5770469), (5770605, 5770805), (5770856, 5771915), (5771990, 5772066)] 2021-10-25 09:33:25.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21206110, 21211079), (21206584, 21211079), (21206584, 21211686), (21209533, 21211079), (21209878, 21211079), (21209878, 21211686), (21211274, 21211686), (21211799, 21223579), (21211799, 21281045), (21211799, 21279181), (21223647, 21281045), (21223647, 21279181), (21279186, 21281045)] 2021-10-25 09:33:25.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035751: ['FBtr0273403'] 2021-10-25 09:33:25.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035751 has a single transcript. 2021-10-25 09:33:25.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035753: ['FBtr0076892', 'FBtr0345036', 'FBtr0333370'] 2021-10-25 09:33:25.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039147: ['FBtr0084542'] 2021-10-25 09:33:25.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039147 has a single transcript. 2021-10-25 09:33:25.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032175: ['FBtr0079971'] 2021-10-25 09:33:25.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032175 has a single transcript. 2021-10-25 09:33:25.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039149: ['FBtr0084543', 'FBtr0339243', 'FBtr0305314'] 2021-10-25 09:33:25.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5780133, 5780383), (5780532, 5780589), (5780774, 5780836), (5780997, 5781550), (5781722, 5781996), (5782308, 5782670), (5782849, 5782916)] 2021-10-25 09:33:25.833 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5780836, 5781722, 'FBtr0091710_exon_4') contains intron (5780997, 5781550) 2021-10-25 09:33:25.833 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5780836, 5781722, 'FBtr0091709_exon_3') contains intron (5780997, 5781550) 2021-10-25 09:33:25.834 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5781536, 5782308, 'FBtr0114577_exon_1') contains intron (5781722, 5781996) 2021-10-25 09:33:25.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0091710_exon_4', 'FBtr0091709_exon_3', 'FBtr0114577_exon_1'] 2021-10-25 09:33:25.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032176: ['FBtr0079933'] 2021-10-25 09:33:25.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032176 has a single transcript. 2021-10-25 09:33:25.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266581: ['FBtr0084174', 'FBtr0084175', 'FBtr0346345'] 2021-10-25 09:33:25.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032178: ['FBtr0079938'] 2021-10-25 09:33:25.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032178 has a single transcript. 2021-10-25 09:33:25.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032181: ['FBtr0079969'] 2021-10-25 09:33:25.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032181 has a single transcript. 2021-10-25 09:33:25.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032184: ['FBtr0079966', 'FBtr0339512'] 2021-10-25 09:33:25.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7240777, 7240854), (7240941, 7241225), (7241255, 7241319)] 2021-10-25 09:33:25.899 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7241225, 7241319, 'FBtr0333370_exon_1') contains intron (7241255, 7241319) 2021-10-25 09:33:25.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333370_exon_1'] 2021-10-25 09:33:25.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24109588, 24109655)] 2021-10-25 09:33:25.904 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24109487, 24110010, 'FBtr0339243_exon_1') contains intron (24109588, 24109655) 2021-10-25 09:33:25.905 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24109366, 24110010, 'FBtr0305314_exon_1') contains intron (24109588, 24109655) 2021-10-25 09:33:25.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339243_exon_1', 'FBtr0305314_exon_1'] 2021-10-25 09:33:25.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22034452, 22035817), (22036015, 22036075), (22036297, 22036506), (22037193, 22037251), (22037877, 22037956)] 2021-10-25 09:33:25.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:25.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:25.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:25.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000615: ['FBtr0086242', 'FBtr0086243', 'FBtr0086244', 'FBtr0302285'] 2021-10-25 09:33:25.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026430: ['FBtr0074775', 'FBtr0074776', 'FBtr0074777', 'FBtr0301307', 'FBtr0301308', 'FBtr0343590'] 2021-10-25 09:33:25.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032187: ['FBtr0079943', 'FBtr0079944'] 2021-10-25 09:33:25.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035754: ['FBtr0076889'] 2021-10-25 09:33:25.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035754 has a single transcript. 2021-10-25 09:33:25.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260459: ['FBtr0075858'] 2021-10-25 09:33:25.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260459 has a single transcript. 2021-10-25 09:33:26.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035755: ['FBtr0076888', 'FBtr0309298', 'FBtr0309299'] 2021-10-25 09:33:26.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260461: ['FBtr0074936', 'FBtr0074937'] 2021-10-25 09:33:26.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266582: ['FBtr0073113'] 2021-10-25 09:33:26.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266582 has a single transcript. 2021-10-25 09:33:26.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20668282, 20668574), (20669895, 20669978), (20670131, 20670200), (20670377, 20670637)] 2021-10-25 09:33:26.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266585: ['FBtr0078547'] 2021-10-25 09:33:26.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266585 has a single transcript. 2021-10-25 09:33:26.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039150: ['FBtr0300705'] 2021-10-25 09:33:26.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039150 has a single transcript. 2021-10-25 09:33:26.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266586: ['FBtr0344798'] 2021-10-25 09:33:26.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266586 has a single transcript. 2021-10-25 09:33:26.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10145218, 10146851), (10147189, 10150337), (10150409, 10150731), (10151655, 10152696), (10152845, 10152951), (10153235, 10153322), (10153492, 10153560), (10153799, 10153861), (10154182, 10154253), (10154485, 10154700)] 2021-10-25 09:33:26.026 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10144775, 10147189, 'FBtr0079944_exon_1') contains intron (10145218, 10146851) 2021-10-25 09:33:26.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079944_exon_1'] 2021-10-25 09:33:26.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266587: ['FBtr0344800'] 2021-10-25 09:33:26.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266587 has a single transcript. 2021-10-25 09:33:26.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039151: ['FBtr0084585', 'FBtr0304157'] 2021-10-25 09:33:26.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266588: ['FBtr0344809'] 2021-10-25 09:33:26.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266588 has a single transcript. 2021-10-25 09:33:26.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266589: ['FBtr0344810'] 2021-10-25 09:33:26.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266589 has a single transcript. 2021-10-25 09:33:26.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266590: ['FBtr0344811', 'FBtr0344812'] 2021-10-25 09:33:26.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19545549, 19545682), (19545964, 19546132), (19546716, 19546772)] 2021-10-25 09:33:26.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24116169, 24116239)] 2021-10-25 09:33:26.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7251618, 7251679), (7252108, 7252175), (7252296, 7253806), (7252296, 7262948), (7253957, 7262948), (7263092, 7263742), (7263095, 7263742), (7263095, 7263631)] 2021-10-25 09:33:26.079 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.079 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032188: ['FBtr0301684'] 2021-10-25 09:33:26.083 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032188 has a single transcript. 2021-10-25 09:33:26.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032189: ['FBtr0079962'] 2021-10-25 09:33:26.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032189 has a single transcript. 2021-10-25 09:33:26.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6865945, 6865996)] 2021-10-25 09:33:26.097 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6865448, 6866439, 'FBtr0344811_exon_1') contains intron (6865945, 6865996) 2021-10-25 09:33:26.098 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344811_exon_1'] 2021-10-25 09:33:26.098 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032191: ['FBtr0079960'] 2021-10-25 09:33:26.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032191 has a single transcript. 2021-10-25 09:33:26.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19561795, 19562410), (19561795, 19562691), (19562509, 19562691), (19563013, 19563075), (19564118, 19564185), (19564692, 19564772), (19565307, 19565413)] 2021-10-25 09:33:26.110 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19564772, 19565598, 'FBtr0074776_exon_1') contains intron (19565307, 19565413) 2021-10-25 09:33:26.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032192: ['FBtr0079959'] 2021-10-25 09:33:26.111 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19564772, 19565598, 'FBtr0074777_exon_1') contains intron (19565307, 19565413) 2021-10-25 09:33:26.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032192 has a single transcript. 2021-10-25 09:33:26.111 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19561339, 19563013, 'FBtr0301307_exon_5') contains intron (19561795, 19562410) 2021-10-25 09:33:26.112 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19564772, 19565598, 'FBtr0343590_exon_1') contains intron (19565307, 19565413) 2021-10-25 09:33:26.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074776_exon_1', 'FBtr0074777_exon_1', 'FBtr0301307_exon_5', 'FBtr0343590_exon_1'] 2021-10-25 09:33:26.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260462: ['FBtr0078822', 'FBtr0078823', 'FBtr0303994'] 2021-10-25 09:33:26.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032193: ['FBtr0079958'] 2021-10-25 09:33:26.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032193 has a single transcript. 2021-10-25 09:33:26.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032194: ['FBtr0079947', 'FBtr0445414', 'FBtr0445415'] 2021-10-25 09:33:26.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039152: ['FBtr0304161', 'FBtr0339244', 'FBtr0339245'] 2021-10-25 09:33:26.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000617: ['FBtr0074463'] 2021-10-25 09:33:26.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000617 has a single transcript. 2021-10-25 09:33:26.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266591: ['FBtr0344814'] 2021-10-25 09:33:26.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266591 has a single transcript. 2021-10-25 09:33:26.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000618: ['FBtr0073540'] 2021-10-25 09:33:26.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000618 has a single transcript. 2021-10-25 09:33:26.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052523: ['FBtr0077183'] 2021-10-25 09:33:26.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052523 has a single transcript. 2021-10-25 09:33:26.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5238156, 5238212), (5238394, 5238453), (5239197, 5239491), (5239619, 5251423), (5239619, 5243837), (5244254, 5251423)] 2021-10-25 09:33:26.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.182 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266592: ['FBtr0344816'] 2021-10-25 09:33:26.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266592 has a single transcript. 2021-10-25 09:33:26.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052525: ['FBtr0089300'] 2021-10-25 09:33:26.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052525 has a single transcript. 2021-10-25 09:33:26.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000625: ['FBtr0075979', 'FBtr0100170', 'FBtr0339921'] 2021-10-25 09:33:26.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10211282, 10211397), (10211282, 10211339), (10212263, 10212326), (10212402, 10212467), (10213250, 10213313)] 2021-10-25 09:33:26.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035756: ['FBtr0290001', 'FBtr0333368'] 2021-10-25 09:33:26.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052528: ['FBtr0074793', 'FBtr0346042'] 2021-10-25 09:33:26.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266593: ['FBtr0344815'] 2021-10-25 09:33:26.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266593 has a single transcript. 2021-10-25 09:33:26.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24113688, 24120302), (24118907, 24120302), (24120815, 24121045), (24122326, 24122876), (24123028, 24123084), (24124461, 24124536), (24124712, 24124779), (24126767, 24126927), (24127347, 24127407), (24127583, 24127639)] 2021-10-25 09:33:26.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266594: ['FBtr0344817'] 2021-10-25 09:33:26.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266594 has a single transcript. 2021-10-25 09:33:26.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266595: ['FBtr0344818'] 2021-10-25 09:33:26.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266595 has a single transcript. 2021-10-25 09:33:26.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266596: ['FBtr0344820'] 2021-10-25 09:33:26.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266596 has a single transcript. 2021-10-25 09:33:26.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266598: ['FBtr0301216', 'FBtr0310464'] 2021-10-25 09:33:26.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19746309, 19746641), (19746731, 19746810), (19747082, 19747249)] 2021-10-25 09:33:26.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7269237, 7269307), (7269554, 7269677), (7271067, 7272513), (7272987, 7273095), (7273608, 7274366), (7274673, 7276963), (7277132, 7279116), (7279357, 7282153), (7282403, 7284604), (7285217, 7294790), (7294919, 7311928), (7312230, 7312739)] 2021-10-25 09:33:26.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12464102, 12464313), (12464897, 12465022), (12465163, 12465843), (12466164, 12467485), (12467644, 12467711)] 2021-10-25 09:33:26.256 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12467485, 12468021, 'FBtr0075979_exon_1') contains intron (12467644, 12467711) 2021-10-25 09:33:26.257 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12467485, 12468021, 'FBtr0339921_exon_1') contains intron (12467644, 12467711) 2021-10-25 09:33:26.257 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075979_exon_1', 'FBtr0339921_exon_1'] 2021-10-25 09:33:26.257 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8000872, 8000919), (8000872, 8000925), (8001015, 8001086), (8001214, 8001278)] 2021-10-25 09:33:26.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260463: ['FBtr0082094', 'FBtr0082095', 'FBtr0082096', 'FBtr0082097', 'FBtr0303039', 'FBtr0346713'] 2021-10-25 09:33:26.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035760: ['FBtr0076837'] 2021-10-25 09:33:26.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035760 has a single transcript. 2021-10-25 09:33:26.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032195: ['FBtr0079950', 'FBtr0079949'] 2021-10-25 09:33:26.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035761: ['FBtr0076885', 'FBtr0076886'] 2021-10-25 09:33:26.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052529: ['FBtr0100839', 'FBtr0074800', 'FBtr0074801', 'FBtr0306520', 'FBtr0306521', 'FBtr0306522', 'FBtr0306523', 'FBtr0332993'] 2021-10-25 09:33:26.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039153: ['FBtr0084584'] 2021-10-25 09:33:26.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039153 has a single transcript. 2021-10-25 09:33:26.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039154: ['FBtr0084548'] 2021-10-25 09:33:26.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039154 has a single transcript. 2021-10-25 09:33:26.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266599: ['FBtr0083055', 'FBtr0083056', 'FBtr0083057', 'FBtr0083058', 'FBtr0083059', 'FBtr0083060', 'FBtr0337053'] 2021-10-25 09:33:26.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039155: ['FBtr0084549'] 2021-10-25 09:33:26.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039155 has a single transcript. 2021-10-25 09:33:26.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039156: ['FBtr0084550'] 2021-10-25 09:33:26.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039156 has a single transcript. 2021-10-25 09:33:26.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10222702, 10223140), (10223059, 10223140)] 2021-10-25 09:33:26.350 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7321884, 7321943), (7322497, 7322554), (7323112, 7323177)] 2021-10-25 09:33:26.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.351 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.351 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000629: ['FBtr0076279', 'FBtr0273338', 'FBtr0334067'] 2021-10-25 09:33:26.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026431: ['FBtr0080033'] 2021-10-25 09:33:26.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026431 has a single transcript. 2021-10-25 09:33:26.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039157: ['FBtr0084579', 'FBtr0100516', 'FBtr0100517', 'FBtr0100518', 'FBtr0084578', 'FBtr0310445'] 2021-10-25 09:33:26.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026432: ['FBtr0076061'] 2021-10-25 09:33:26.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026432 has a single transcript. 2021-10-25 09:33:26.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026433: ['FBtr0074075'] 2021-10-25 09:33:26.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026433 has a single transcript. 2021-10-25 09:33:26.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026438: ['FBtr0078043', 'FBtr0301316', 'FBtr0301317'] 2021-10-25 09:33:26.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032196: ['FBtr0079955', 'FBtr0079956', 'FBtr0343607'] 2021-10-25 09:33:26.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035762: ['FBtr0076838'] 2021-10-25 09:33:26.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035762 has a single transcript. 2021-10-25 09:33:26.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035763: ['FBtr0076884', 'FBtr0332734'] 2021-10-25 09:33:26.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10635047, 10635115), (10635685, 10635747), (10635937, 10635995), (10636093, 10636425), (10636093, 10636623), (10636440, 10636623), (10636784, 10636845), (10637577, 10637639), (10637976, 10638041)] 2021-10-25 09:33:26.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(738268, 738320), (738435, 738507), (738837, 739444), (740014, 740356), (740690, 740799), (740964, 743337), (743623, 744195), (743623, 744083)] 2021-10-25 09:33:26.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.481 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:26.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10224892, 10224957), (10225149, 10225278), (10225432, 10225503), (10225811, 10226664), (10225811, 10225873), (10225965, 10226664)] 2021-10-25 09:33:26.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15242799, 15244359), (15242970, 15244359), (15243180, 15244359), (15243184, 15244359), (15243294, 15244359), (15244302, 15244359)] 2021-10-25 09:33:26.495 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15244255, 15246614, 'FBtr0083056_exon_1') contains intron (15244302, 15244359) 2021-10-25 09:33:26.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083056_exon_1'] 2021-10-25 09:33:26.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19866242, 19866792), (19866269, 19866792), (19866387, 19866792), (19867166, 19868400), (19871593, 19871811), (19872444, 19900615), (19875888, 19899011), (19887413, 19899011), (19887492, 19899011), (19892513, 19900615), (19893957, 19900615), (19899972, 19900615), (19901488, 19901867), (19904218, 19904285), (19904445, 19904508), (19904677, 19904738)] 2021-10-25 09:33:26.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.521 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24156139, 24156244), (24156372, 24156433), (24156586, 24156646), (24156782, 24156843), (24157175, 24157257), (24157175, 24157390), (24157317, 24157390), (24158087, 24158146), (24158394, 24158491), (24158814, 24158875), (24159023, 24159088), (24159183, 24159241), (24159326, 24159475), (24159326, 24159491), (24159326, 24159390), (24159404, 24159475), (24159539, 24159647), (24160686, 24160746), (24160862, 24160925), (24161125, 24161437)] 2021-10-25 09:33:26.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035766: ['FBtr0076882', 'FBtr0100278'] 2021-10-25 09:33:26.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000633: ['FBtr0339940', 'FBtr0087625'] 2021-10-25 09:33:26.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026439: ['FBtr0079800', 'FBtr0079801', 'FBtr0079802', 'FBtr0303876'] 2021-10-25 09:33:26.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7335875, 7335937), (7339041, 7339160), (7339245, 7339309)] 2021-10-25 09:33:26.599 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.599 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9687637, 9687700), (9687767, 9688535), (9687767, 9687935), (9688042, 9688713), (9688621, 9688713), (9688853, 9689079), (9689253, 9689321), (9689875, 9690431), (9689875, 9690021), (9690078, 9690431), (9691103, 9691164), (9691475, 9691639), (9691475, 9691624), (9692504, 9692566)] 2021-10-25 09:33:26.618 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9691164, 9691812, 'FBtr0082095_exon_1') contains intron (9691475, 9691639) 2021-10-25 09:33:26.619 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9691164, 9691841, 'FBtr0082096_exon_1') contains intron (9691475, 9691639) 2021-10-25 09:33:26.619 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9691164, 9692504, 'FBtr0303039_exon_2') contains intron (9691475, 9691639) 2021-10-25 09:33:26.620 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9691164, 9691841, 'FBtr0346713_exon_1') contains intron (9691475, 9691639) 2021-10-25 09:33:26.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082095_exon_1', 'FBtr0082096_exon_1', 'FBtr0303039_exon_2', 'FBtr0346713_exon_1'] 2021-10-25 09:33:26.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032197: ['FBtr0079953', 'FBtr0079954'] 2021-10-25 09:33:26.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13623684, 13643721), (13623684, 13654283), (13643820, 13654283), (13654454, 13706434), (13707198, 13713128), (13713306, 13713762), (13713989, 13714716), (13714873, 13718377), (13718517, 13719085), (13719215, 13725545), (13725674, 13726077), (13726278, 13746162), (13746341, 13746405)] 2021-10-25 09:33:26.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10229126, 10229184), (10229346, 10229413), (10229611, 10229704), (10229955, 10231282), (10229955, 10231538)] 2021-10-25 09:33:26.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035767: ['FBtr0076881', 'FBtr0332732', 'FBtr0332733'] 2021-10-25 09:33:26.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9333659, 9338034), (9333827, 9338006), (9333827, 9338034), (9337932, 9338006), (9338339, 9338425), (9338521, 9338587), (9338755, 9338817), (9338860, 9339513), (9339556, 9339619), (9339803, 9339865), (9339996, 9340058), (9340488, 9340543), (9340640, 9340699)] 2021-10-25 09:33:26.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000635: ['FBtr0070665', 'FBtr0070666', 'FBtr0070667', 'FBtr0336882', 'FBtr0336884', 'FBtr0343523', 'FBtr0343524'] 2021-10-25 09:33:26.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032198: ['FBtr0079951', 'FBtr0079952'] 2021-10-25 09:33:26.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7342170, 7342235), (7342832, 7342891), (7343043, 7343103), (7343610, 7343667), (7343945, 7345129), (7343945, 7344091)] 2021-10-25 09:33:26.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039158: ['FBtr0084551'] 2021-10-25 09:33:26.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10232659, 10233480), (10232659, 10233756), (10233561, 10233756)] 2021-10-25 09:33:26.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039158 has a single transcript. 2021-10-25 09:33:26.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266615: ['FBtr0344831'] 2021-10-25 09:33:26.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266615 has a single transcript. 2021-10-25 09:33:26.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039159: ['FBtr0084577'] 2021-10-25 09:33:26.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039159 has a single transcript. 2021-10-25 09:33:26.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266616: ['FBtr0344899'] 2021-10-25 09:33:26.791 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266616 has a single transcript. 2021-10-25 09:33:26.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039160: ['FBtr0084576'] 2021-10-25 09:33:26.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039160 has a single transcript. 2021-10-25 09:33:26.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266617: ['FBtr0344900'] 2021-10-25 09:33:26.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266617 has a single transcript. 2021-10-25 09:33:26.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266618: ['FBtr0344901'] 2021-10-25 09:33:26.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266618 has a single transcript. 2021-10-25 09:33:26.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039161: ['FBtr0084553', 'FBtr0110794', 'FBtr0335412', 'FBtr0344266'] 2021-10-25 09:33:26.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266619: ['FBtr0344902'] 2021-10-25 09:33:26.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266619 has a single transcript. 2021-10-25 09:33:26.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266620: ['FBtr0344903'] 2021-10-25 09:33:26.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266620 has a single transcript. 2021-10-25 09:33:26.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026441: ['FBtr0083082', 'FBtr0330039', 'FBtr0334695'] 2021-10-25 09:33:26.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266621: ['FBtr0344904'] 2021-10-25 09:33:26.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266621 has a single transcript. 2021-10-25 09:33:26.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052532: ['FBtr0340418', 'FBtr0340419', 'FBtr0340420'] 2021-10-25 09:33:26.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266622: ['FBtr0344905', 'FBtr0344906'] 2021-10-25 09:33:26.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035768: ['FBtr0076880'] 2021-10-25 09:33:26.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035768 has a single transcript. 2021-10-25 09:33:26.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032200: ['FBtr0080086'] 2021-10-25 09:33:26.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032200 has a single transcript. 2021-10-25 09:33:26.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035769: ['FBtr0076878'] 2021-10-25 09:33:26.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035769 has a single transcript. 2021-10-25 09:33:26.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035770: ['FBtr0273398', 'FBtr0273399', 'FBtr0332731'] 2021-10-25 09:33:26.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032202: ['FBtr0089737', 'FBtr0089735', 'FBtr0089736', 'FBtr0089738'] 2021-10-25 09:33:26.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260464: ['FBtr0082829'] 2021-10-25 09:33:26.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260464 has a single transcript. 2021-10-25 09:33:26.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7326076, 7333521), (7326076, 7333695), (7333639, 7333695), (7333910, 7334400), (7334783, 7334868)] 2021-10-25 09:33:26.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4134903, 4136568), (4134903, 4135410), (4135497, 4136568), (4135533, 4136568), (4136298, 4136568), (4136770, 4141770), (4139317, 4141770), (4141954, 4142049), (4143543, 4143626), (4143751, 4149387), (4149551, 4154386), (4149551, 4154584), (4154431, 4154584), (4154756, 4203190), (4203486, 4205899)] 2021-10-25 09:33:26.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260466: ['FBtr0091937', 'FBtr0091938'] 2021-10-25 09:33:26.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15320918, 15321383), (15321604, 15321675)] 2021-10-25 09:33:26.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24172732, 24173053), (24173112, 24180292), (24180452, 24180586), (24180685, 24183861), (24180685, 24183864), (24180685, 24180906)] 2021-10-25 09:33:26.899 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24180586, 24181420, 'FBtr0084553_exon_4') contains intron (24180685, 24180906) 2021-10-25 09:33:26.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19533270, 19533990), (19533270, 19533978), (19534096, 19534179), (19534356, 19538691), (19538799, 19539922), (19540101, 19543728), (19545096, 19545346), (19546156, 19547223)] 2021-10-25 09:33:26.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084553_exon_4'] 2021-10-25 09:33:26.899 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19543728, 19546156, 'FBtr0340418_exon_2') contains intron (19545096, 19545346) 2021-10-25 09:33:26.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.899 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19543728, 19546156, 'FBtr0340419_exon_2') contains intron (19545096, 19545346) 2021-10-25 09:33:26.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340418_exon_2', 'FBtr0340419_exon_2'] 2021-10-25 09:33:26.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20042876, 20042934), (20043046, 20043102), (20043219, 20043283), (20043432, 20043624), (20043739, 20043821), (20043877, 20043933), (20044059, 20044117), (20044453, 20044526), (20044621, 20044679), (20044766, 20044980), (20045174, 20045229), (20045367, 20045427), (20045891, 20045948), (20046081, 20046138), (20046255, 20046321), (20046470, 20046523), (20046638, 20046837), (20046893, 20046951), (20047077, 20047139), (20047475, 20047542), (20047724, 20047795), (20047989, 20048055), (20048339, 20048402), (20048575, 20048626)] 2021-10-25 09:33:26.920 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7358375, 7358445), (7358615, 7358690), (7358780, 7358850), (7359389, 7359467), (7359602, 7359677), (7359850, 7359920)] 2021-10-25 09:33:26.921 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7359467, 7359850, 'FBtr0273399_exon_2') contains intron (7359602, 7359677) 2021-10-25 09:33:26.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273399_exon_2'] 2021-10-25 09:33:26.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266623: ['FBtr0344907'] 2021-10-25 09:33:26.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266623 has a single transcript. 2021-10-25 09:33:26.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266624: ['FBtr0344908'] 2021-10-25 09:33:26.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266624 has a single transcript. 2021-10-25 09:33:26.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266625: ['FBtr0344909'] 2021-10-25 09:33:26.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10264264, 10264548), (10264264, 10264551), (10264633, 10264763), (10264885, 10264946), (10264889, 10264946)] 2021-10-25 09:33:26.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266625 has a single transcript. 2021-10-25 09:33:26.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:26.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266626: ['FBtr0344913', 'FBtr0344914'] 2021-10-25 09:33:26.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260467: ['FBtr0084211', 'FBtr0084212', 'FBtr0344525'] 2021-10-25 09:33:26.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10152773, 10152875), (10153106, 10153298), (10153973, 10154052)] 2021-10-25 09:33:26.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:26.991 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052533: ['FBtr0074786', 'FBtr0346016'] 2021-10-25 09:33:27.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035771: ['FBtr0076847'] 2021-10-25 09:33:27.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035771 has a single transcript. 2021-10-25 09:33:27.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035772: ['FBtr0076872', 'FBtr0076873', 'FBtr0302546', 'FBtr0302547', 'FBtr0302548'] 2021-10-25 09:33:27.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039163: ['FBtr0084574', 'FBtr0084575', 'FBtr0335413', 'FBtr0345215'] 2021-10-25 09:33:27.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22362946, 22363006), (22363287, 22363353), (22364127, 22364196)] 2021-10-25 09:33:27.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19474765, 19476109), (19476342, 19476410), (19477339, 19477407), (19477605, 19477667), (19478038, 19478092), (19478623, 19478683)] 2021-10-25 09:33:27.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22362894, 22363287, 'FBtr0084212_exon_1') contains intron (22362946, 22363006) 2021-10-25 09:33:27.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084212_exon_1'] 2021-10-25 09:33:27.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266627: ['FBtr0344915', 'FBtr0345623'] 2021-10-25 09:33:27.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.055 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083082': ['FBtr0330039']} 2021-10-25 09:33:27.056 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330039']] 2021-10-25 09:33:27.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032204: ['FBtr0079984'] 2021-10-25 09:33:27.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032204 has a single transcript. 2021-10-25 09:33:27.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10478305, 10478385), (10478305, 10478411)] 2021-10-25 09:33:27.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032205: ['FBtr0079985'] 2021-10-25 09:33:27.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032205 has a single transcript. 2021-10-25 09:33:27.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032208: ['FBtr0080074'] 2021-10-25 09:33:27.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032208 has a single transcript. 2021-10-25 09:33:27.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052536: ['FBtr0074686'] 2021-10-25 09:33:27.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052536 has a single transcript. 2021-10-25 09:33:27.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026479: ['FBtr0077744', 'FBtr0335173'] 2021-10-25 09:33:27.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032209: ['FBtr0080073'] 2021-10-25 09:33:27.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032209 has a single transcript. 2021-10-25 09:33:27.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052537: ['FBtr0074687', 'FBtr0332395'] 2021-10-25 09:33:27.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24188461, 24188515), (24188607, 24188669), (24188757, 24188832)] 2021-10-25 09:33:27.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24188515, 24188896, 'FBtr0084574_exon_1') contains intron (24188607, 24188669) 2021-10-25 09:33:27.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24188669, 24188896, 'FBtr0084575_exon_1') contains intron (24188757, 24188832) 2021-10-25 09:33:27.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24188515, 24188699, 'FBtr0345215_exon_1') contains intron (24188607, 24188669) 2021-10-25 09:33:27.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084574_exon_1', 'FBtr0084575_exon_1', 'FBtr0345215_exon_1'] 2021-10-25 09:33:27.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032210: ['FBtr0080070', 'FBtr0080071', 'FBtr0080072'] 2021-10-25 09:33:27.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266628: ['FBtr0344916'] 2021-10-25 09:33:27.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266628 has a single transcript. 2021-10-25 09:33:27.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2581838, 2581897), (2582109, 2582173), (2582402, 2582465), (2582811, 2582866), (2583318, 2583533), (2584198, 2584256), (2584401, 2585169)] 2021-10-25 09:33:27.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7364961, 7365069), (7364964, 7366441), (7366108, 7366161), (7366210, 7366441), (7366516, 7367558), (7367984, 7368889), (7367984, 7368062), (7369130, 7369226)] 2021-10-25 09:33:27.149 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7368889, 7369260, 'FBtr0076873_exon_1') contains intron (7369130, 7369226) 2021-10-25 09:33:27.149 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7368889, 7369260, 'FBtr0302547_exon_1') contains intron (7369130, 7369226) 2021-10-25 09:33:27.150 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7368889, 7369260, 'FBtr0302548_exon_1') contains intron (7369130, 7369226) 2021-10-25 09:33:27.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076873_exon_1', 'FBtr0302547_exon_1', 'FBtr0302548_exon_1'] 2021-10-25 09:33:27.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266629: ['FBtr0344917'] 2021-10-25 09:33:27.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266629 has a single transcript. 2021-10-25 09:33:27.156 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19275339, 19275399), (19275528, 19276217)] 2021-10-25 09:33:27.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266630: ['FBtr0344918'] 2021-10-25 09:33:27.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266630 has a single transcript. 2021-10-25 09:33:27.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260468: ['FBtr0085563', 'FBtr0085564'] 2021-10-25 09:33:27.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000636: ['FBtr0081051', 'FBtr0081052', 'FBtr0112804', 'FBtr0112805', 'FBtr0301391', 'FBtr0344782', 'FBtr0340580'] 2021-10-25 09:33:27.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266631: ['FBtr0344919', 'FBtr0344920'] 2021-10-25 09:33:27.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10296110, 10296171), (10296368, 10296423), (10296565, 10296624), (10296859, 10296937), (10297156, 10297215), (10297370, 10297430), (10297606, 10297704), (10297936, 10298780), (10297936, 10298022), (10298989, 10299043), (10299220, 10299761), (10299220, 10299746)] 2021-10-25 09:33:27.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30057034, 30057139), (30057034, 30057115)] 2021-10-25 09:33:27.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026533: ['FBtr0100437', 'FBtr0100436', 'FBtr0100438', 'FBtr0100440', 'FBtr0332946'] 2021-10-25 09:33:27.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052544: ['FBtr0074644', 'FBtr0333158'] 2021-10-25 09:33:27.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9868515, 9868578), (9868515, 9868613), (9868815, 9868877), (9868934, 9869014)] 2021-10-25 09:33:27.219 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.219 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.258 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18860469, 18860520), (18860942, 18861045)] 2021-10-25 09:33:27.258 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18860520, 18861964, 'FBtr0074644_exon_2') contains intron (18860942, 18861045) 2021-10-25 09:33:27.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039165: ['FBtr0084555'] 2021-10-25 09:33:27.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074644_exon_2'] 2021-10-25 09:33:27.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039165 has a single transcript. 2021-10-25 09:33:27.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039167: ['FBtr0084572'] 2021-10-25 09:33:27.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039167 has a single transcript. 2021-10-25 09:33:27.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260469: ['FBtr0301970', 'FBtr0334941'] 2021-10-25 09:33:27.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039169: ['FBtr0084565', 'FBtr0330382'] 2021-10-25 09:33:27.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266632: ['FBtr0344921', 'FBtr0344922', 'FBtr0346679', 'FBtr0346680', 'FBtr0346681', 'FBtr0346682'] 2021-10-25 09:33:27.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032211: ['FBtr0080066', 'FBtr0345746'] 2021-10-25 09:33:27.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052546: ['FBtr0074600'] 2021-10-25 09:33:27.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052546 has a single transcript. 2021-10-25 09:33:27.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27849390, 27849949), (27850025, 27850065), (27850025, 27850080)] 2021-10-25 09:33:27.313 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:27.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.321 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084565': ['FBtr0330382']} 2021-10-25 09:33:27.322 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330382']] 2021-10-25 09:33:27.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18320730, 18383401), (18383719, 18383838), (18384180, 18384458), (18384893, 18387286), (18384893, 18386156), (18387317, 18392244), (18387317, 18391051), (18387317, 18388381), (18388956, 18389011), (18391364, 18392064), (18391364, 18392244), (18392135, 18392244)] 2021-10-25 09:33:27.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16856303, 16856805), (16856315, 16856805), (16857052, 16857632), (16858114, 16858180), (16858601, 16858663), (16858764, 16858826), (16859000, 16859060), (16859249, 16859312), (16859397, 16859452), (16859574, 16859632), (16859785, 16859849)] 2021-10-25 09:33:27.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052547: ['FBtr0290002', 'FBtr0332378'] 2021-10-25 09:33:27.323 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18388381, 18390710, 'FBtr0112805_exon_6') contains intron (18388956, 18389011) 2021-10-25 09:33:27.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112805_exon_6'] 2021-10-25 09:33:27.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039170: ['FBtr0084560'] 2021-10-25 09:33:27.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039170 has a single transcript. 2021-10-25 09:33:27.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035776: ['FBtr0076869', 'FBtr0339402'] 2021-10-25 09:33:27.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039172: ['FBtr0084564', 'FBtr0305044'] 2021-10-25 09:33:27.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10301859, 10301943)] 2021-10-25 09:33:27.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18445984, 18446093), (18446432, 18446993), (18447119, 18447181), (18447273, 18458797), (18458977, 18461984), (18462536, 18479164)] 2021-10-25 09:33:27.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260470: ['FBtr0079004', 'FBtr0079005', 'FBtr0333534', 'FBtr0333535'] 2021-10-25 09:33:27.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:27.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7386682, 7386746), (7387256, 7387458), (7387644, 7387802)] 2021-10-25 09:33:27.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032213: ['FBtr0080064', 'FBtr0344857'] 2021-10-25 09:33:27.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3943610, 3943673), (3943882, 3948847), (3943882, 3949321), (3943882, 3943962), (3944050, 3949321), (3947781, 3947844), (3948053, 3949321), (3948053, 3948847), (3948053, 3948133), (3948221, 3949321)] 2021-10-25 09:33:27.411 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052548: ['FBtr0074568', 'FBtr0074569'] 2021-10-25 09:33:27.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039175: ['FBtr0084637'] 2021-10-25 09:33:27.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039175 has a single transcript. 2021-10-25 09:33:27.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035777: ['FBtr0076852', 'FBtr0332724'] 2021-10-25 09:33:27.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039177: ['FBtr0084600'] 2021-10-25 09:33:27.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039177 has a single transcript. 2021-10-25 09:33:27.441 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10304769, 10304826), (10305082, 10305148), (10305509, 10306511)] 2021-10-25 09:33:27.441 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.441 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039178: ['FBtr0084601'] 2021-10-25 09:33:27.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039178 has a single transcript. 2021-10-25 09:33:27.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039180: ['FBtr0084634'] 2021-10-25 09:33:27.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039180 has a single transcript. 2021-10-25 09:33:27.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5039740, 5039808), (5040027, 5040119)] 2021-10-25 09:33:27.463 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5039808, 5040818, 'FBtr0079005_exon_2') contains intron (5040027, 5040119) 2021-10-25 09:33:27.463 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5039808, 5040622, 'FBtr0333535_exon_2') contains intron (5040027, 5040119) 2021-10-25 09:33:27.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079005_exon_2', 'FBtr0333535_exon_2'] 2021-10-25 09:33:27.463 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039182: ['FBtr0084632'] 2021-10-25 09:33:27.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039182 has a single transcript. 2021-10-25 09:33:27.468 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18436801, 18440189), (18436801, 18437001)] 2021-10-25 09:33:27.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039183: ['FBtr0084605', 'FBtr0334599'] 2021-10-25 09:33:27.479 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7391519, 7393592), (7394268, 7394737), (7394848, 7394935), (7395090, 7395612)] 2021-10-25 09:33:27.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032214: ['FBtr0079987'] 2021-10-25 09:33:27.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032214 has a single transcript. 2021-10-25 09:33:27.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032216: ['FBtr0080061', 'FBtr0331669'] 2021-10-25 09:33:27.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026562: ['FBtr0085094', 'FBtr0334309'] 2021-10-25 09:33:27.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24333872, 24333924), (24334369, 24334432), (24335511, 24335567), (24336236, 24336293)] 2021-10-25 09:33:27.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052549: ['FBtr0074570', 'FBtr0074571', 'FBtr0074574', 'FBtr0074575', 'FBtr0340421', 'FBtr0340422'] 2021-10-25 09:33:27.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035779: ['FBtr0076854'] 2021-10-25 09:33:27.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035779 has a single transcript. 2021-10-25 09:33:27.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035780: ['FBtr0076855'] 2021-10-25 09:33:27.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035780 has a single transcript. 2021-10-25 09:33:27.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10312908, 10312961), (10313027, 10313083), (10313240, 10313305), (10313688, 10313900), (10314005, 10314063), (10314239, 10314295)] 2021-10-25 09:33:27.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26870130, 26870192), (26870372, 26871925), (26870372, 26870509)] 2021-10-25 09:33:27.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.551 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035781: ['FBtr0076868', 'FBtr0332725'] 2021-10-25 09:33:27.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039184: ['FBtr0084606', 'FBtr0346110'] 2021-10-25 09:33:27.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000639: ['FBtr0075749', 'FBtr0075750', 'FBtr0339515'] 2021-10-25 09:33:27.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260474: ['FBtr0302050'] 2021-10-25 09:33:27.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260474 has a single transcript. 2021-10-25 09:33:27.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032217: ['FBtr0079988'] 2021-10-25 09:33:27.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032217 has a single transcript. 2021-10-25 09:33:27.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260475: ['FBtr0087715'] 2021-10-25 09:33:27.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260475 has a single transcript. 2021-10-25 09:33:27.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026563: ['FBtr0081628'] 2021-10-25 09:33:27.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026563 has a single transcript. 2021-10-25 09:33:27.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7402660, 7402727), (7403618, 7403835)] 2021-10-25 09:33:27.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032218: ['FBtr0080060', 'FBtr0331666', 'FBtr0331667', 'FBtr0331668'] 2021-10-25 09:33:27.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260477: ['FBtr0300950'] 2021-10-25 09:33:27.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260477 has a single transcript. 2021-10-25 09:33:27.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026565: ['FBtr0081699', 'FBtr0337022'] 2021-10-25 09:33:27.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266633: ['FBtr0344923', 'FBtr0344924', 'FBtr0344925'] 2021-10-25 09:33:27.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260479: ['FBtr0079502', 'FBtr0079501'] 2021-10-25 09:33:27.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24337070, 24337846), (24338864, 24338920), (24339231, 24339295), (24339441, 24339554)] 2021-10-25 09:33:27.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14097808, 14097868), (14097808, 14097874)] 2021-10-25 09:33:27.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14094588, 14098053, 'FBtr0075750_exon_1') contains intron (14097808, 14097868) 2021-10-25 09:33:27.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075750_exon_1'] 2021-10-25 09:33:27.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035782: ['FBtr0076866'] 2021-10-25 09:33:27.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035782 has a single transcript. 2021-10-25 09:33:27.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6643252, 6643863), (6644109, 6644215)] 2021-10-25 09:33:27.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18390932, 18390997), (18391966, 18392039), (18392160, 18392334), (18392481, 18392548), (18392762, 18392836), (18392910, 18407796), (18392910, 18403984), (18407885, 18409883), (18407885, 18408517), (18408859, 18409883), (18408859, 18409049), (18408942, 18409883), (18408942, 18409049), (18409178, 18409883)] 2021-10-25 09:33:27.681 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7735206, 7735319), (7735495, 7735558), (7735690, 7736337), (7736989, 7738618)] 2021-10-25 09:33:27.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.682 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7736337, 7738809, 'FBtr0079501_exon_1') contains intron (7736989, 7738618) 2021-10-25 09:33:27.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079501_exon_1'] 2021-10-25 09:33:27.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035785: ['FBtr0332797'] 2021-10-25 09:33:27.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035785 has a single transcript. 2021-10-25 09:33:27.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039186: ['FBtr0084630', 'FBtr0084631', 'FBtr0273282', 'FBtr0273283', 'FBtr0334601', 'FBtr0334602', 'FBtr0334603'] 2021-10-25 09:33:27.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035786: ['FBtr0332798', 'FBtr0332799', 'FBtr0302557', 'FBtr0299721'] 2021-10-25 09:33:27.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12867748, 12868396), (12868307, 12868934), (12868606, 12868934), (12869007, 12869223)] 2021-10-25 09:33:27.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10319076, 10319130), (10319076, 10319133), (10319257, 10319319), (10319423, 10319487), (10319560, 10319617), (10319713, 10319846), (10320053, 10322891), (10320053, 10321775), (10320053, 10321505), (10320053, 10320563), (10320656, 10321775)] 2021-10-25 09:33:27.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260480: ['FBtr0072962'] 2021-10-25 09:33:27.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260480 has a single transcript. 2021-10-25 09:33:27.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026566: ['FBtr0301623', 'FBtr0346140'] 2021-10-25 09:33:27.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260481: ['FBtr0078529'] 2021-10-25 09:33:27.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260481 has a single transcript. 2021-10-25 09:33:27.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260482: ['FBtr0073904'] 2021-10-25 09:33:27.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260482 has a single transcript. 2021-10-25 09:33:27.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000640: ['FBtr0079808', 'FBtr0343428', 'FBtr0343429'] 2021-10-25 09:33:27.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260484: ['FBtr0070600'] 2021-10-25 09:33:27.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260484 has a single transcript. 2021-10-25 09:33:27.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7465614, 7465669), (7465837, 7465900), (7466029, 7466086), (7466179, 7466246), (7466348, 7466400), (7466568, 7466625), (7466751, 7466818), (7467075, 7467128), (7467187, 7467252), (7467420, 7467477), (7467657, 7467723), (7467663, 7467723), (7467858, 7467925), (7467858, 7467919), (7468096, 7468145)] 2021-10-25 09:33:27.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6656893, 6657147)] 2021-10-25 09:33:27.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260486: ['FBtr0332201', 'FBtr0330721', 'FBtr0330722', 'FBtr0330723', 'FBtr0330724', 'FBtr0330725', 'FBtr0330726', 'FBtr0330727', 'FBtr0330728'] 2021-10-25 09:33:27.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266634: ['FBtr0344927'] 2021-10-25 09:33:27.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266634 has a single transcript. 2021-10-25 09:33:27.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266635: ['FBtr0344928'] 2021-10-25 09:33:27.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266635 has a single transcript. 2021-10-25 09:33:27.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266636: ['FBtr0344930'] 2021-10-25 09:33:27.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266636 has a single transcript. 2021-10-25 09:33:27.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266637: ['FBtr0344931'] 2021-10-25 09:33:27.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266637 has a single transcript. 2021-10-25 09:33:27.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9427258, 9427318)] 2021-10-25 09:33:27.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266638: ['FBtr0344932'] 2021-10-25 09:33:27.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266638 has a single transcript. 2021-10-25 09:33:27.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266639: ['FBtr0344933'] 2021-10-25 09:33:27.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266639 has a single transcript. 2021-10-25 09:33:27.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266640: ['FBtr0344934'] 2021-10-25 09:33:27.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266640 has a single transcript. 2021-10-25 09:33:27.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24346760, 24346816), (24346986, 24347080), (24347290, 24347404), (24347299, 24347404), (24347594, 24347663), (24348062, 24348146), (24348080, 24348146), (24348560, 24348661), (24348563, 24348661)] 2021-10-25 09:33:27.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24348146, 24348791, 'FBtr0084630_exon_1') contains intron (24348560, 24348661) 2021-10-25 09:33:27.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24347404, 24348080, 'FBtr0273282_exon_2') contains intron (24347594, 24347663) 2021-10-25 09:33:27.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24348146, 24348791, 'FBtr0273282_exon_1') contains intron (24348560, 24348661) 2021-10-25 09:33:27.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24347404, 24348080, 'FBtr0273283_exon_3') contains intron (24347594, 24347663) 2021-10-25 09:33:27.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24348146, 24348791, 'FBtr0334601_exon_1') contains intron (24348560, 24348661) 2021-10-25 09:33:27.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24347404, 24348062, 'FBtr0334602_exon_2') contains intron (24347594, 24347663) 2021-10-25 09:33:27.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026570: ['FBtr0072915', 'FBtr0346076'] 2021-10-25 09:33:27.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24348146, 24348791, 'FBtr0334602_exon_1') contains intron (24348560, 24348661) 2021-10-25 09:33:27.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24348146, 24348791, 'FBtr0334603_exon_1') contains intron (24348560, 24348661) 2021-10-25 09:33:27.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084630_exon_1', 'FBtr0273282_exon_2', 'FBtr0273282_exon_1', 'FBtr0273283_exon_3', 'FBtr0334601_exon_1', 'FBtr0334602_exon_2', 'FBtr0334602_exon_1', 'FBtr0334603_exon_1'] 2021-10-25 09:33:27.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266641: ['FBtr0344935'] 2021-10-25 09:33:27.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266641 has a single transcript. 2021-10-25 09:33:27.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032219: ['FBtr0079990', 'FBtr0079991', 'FBtr0079989', 'FBtr0331665'] 2021-10-25 09:33:27.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266642: ['FBtr0344936', 'FBtr0344937'] 2021-10-25 09:33:27.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2170692, 2170822)] 2021-10-25 09:33:27.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052551: ['FBtr0290003'] 2021-10-25 09:33:27.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052551 has a single transcript. 2021-10-25 09:33:27.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21309911, 21310003)] 2021-10-25 09:33:27.901 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21309394, 21310146, 'FBtr0344936_exon_1') contains intron (21309911, 21310003) 2021-10-25 09:33:27.901 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344936_exon_1'] 2021-10-25 09:33:27.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052553: ['FBtr0445671'] 2021-10-25 09:33:27.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052553 has a single transcript. 2021-10-25 09:33:27.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052554: ['FBtr0074467'] 2021-10-25 09:33:27.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052554 has a single transcript. 2021-10-25 09:33:27.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000644: ['FBtr0070542'] 2021-10-25 09:33:27.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000644 has a single transcript. 2021-10-25 09:33:27.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035787: ['FBtr0076863'] 2021-10-25 09:33:27.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035787 has a single transcript. 2021-10-25 09:33:27.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052557: ['FBtr0074466'] 2021-10-25 09:33:27.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052557 has a single transcript. 2021-10-25 09:33:27.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035788: ['FBtr0076862'] 2021-10-25 09:33:27.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035788 has a single transcript. 2021-10-25 09:33:27.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000658: ['FBtr0086754'] 2021-10-25 09:33:27.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000658 has a single transcript. 2021-10-25 09:33:27.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035789: ['FBtr0076789'] 2021-10-25 09:33:27.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035789 has a single transcript. 2021-10-25 09:33:27.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052563: ['FBtr0074391', 'FBtr0340615'] 2021-10-25 09:33:27.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000659: ['FBtr0085321', 'FBtr0330333', 'FBtr0300259', 'FBtr0345227', 'FBtr0346765'] 2021-10-25 09:33:27.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266643: ['FBtr0344938'] 2021-10-25 09:33:27.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266643 has a single transcript. 2021-10-25 09:33:27.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035790: ['FBtr0332140'] 2021-10-25 09:33:27.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035790 has a single transcript. 2021-10-25 09:33:27.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026573: ['FBtr0088041', 'FBtr0088042', 'FBtr0346629'] 2021-10-25 09:33:27.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10322596, 10322707), (10322596, 10322721), (10322834, 10323670), (10323507, 10323670), (10323561, 10323670), (10323779, 10323847), (10324309, 10324378)] 2021-10-25 09:33:27.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266644: ['FBtr0344939'] 2021-10-25 09:33:27.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266644 has a single transcript. 2021-10-25 09:33:27.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035791: ['FBtr0076831', 'FBtr0332145'] 2021-10-25 09:33:27.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266645: ['FBtr0344940'] 2021-10-25 09:33:27.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266645 has a single transcript. 2021-10-25 09:33:27.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266646: ['FBtr0344929'] 2021-10-25 09:33:27.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266646 has a single transcript. 2021-10-25 09:33:27.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17208652, 17208713)] 2021-10-25 09:33:27.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:27.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:27.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266647: ['FBtr0346037'] 2021-10-25 09:33:27.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266647 has a single transcript. 2021-10-25 09:33:27.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7473199, 7473297), (7473199, 7473419), (7473199, 7473656), (7473889, 7473947), (7474236, 7474294), (7474505, 7476978), (7477125, 7477181), (7478783, 7478850), (7478792, 7478850), (7480323, 7480560), (7480326, 7480560), (7480896, 7480951), (7481584, 7481642), (7482464, 7482527), (7482831, 7482892), (7483428, 7483510), (7483627, 7492184), (7483627, 7495512), (7492226, 7495512)] 2021-10-25 09:33:27.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330721_exon_14') contains intron (7473199, 7473297) 2021-10-25 09:33:27.992 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330722_exon_13') contains intron (7473199, 7473297) 2021-10-25 09:33:27.993 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330724_exon_14') contains intron (7473199, 7473297) 2021-10-25 09:33:27.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330726_exon_14') contains intron (7473199, 7473297) 2021-10-25 09:33:27.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330727_exon_13') contains intron (7473199, 7473297) 2021-10-25 09:33:27.995 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7472512, 7473889, 'FBtr0330728_exon_14') contains intron (7473199, 7473297) 2021-10-25 09:33:27.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266648: ['FBtr0344950'] 2021-10-25 09:33:27.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266648 has a single transcript. 2021-10-25 09:33:27.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330721_exon_14', 'FBtr0330722_exon_13', 'FBtr0330724_exon_14', 'FBtr0330726_exon_14', 'FBtr0330727_exon_13', 'FBtr0330728_exon_14'] 2021-10-25 09:33:27.995 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266649: ['FBtr0344951'] 2021-10-25 09:33:28.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266649 has a single transcript. 2021-10-25 09:33:28.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7497837, 7497920)] 2021-10-25 09:33:28.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266650: ['FBtr0344952'] 2021-10-25 09:33:28.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266650 has a single transcript. 2021-10-25 09:33:28.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266651: ['FBtr0344953'] 2021-10-25 09:33:28.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266651 has a single transcript. 2021-10-25 09:33:28.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11971075, 11971137), (11971606, 11971724), (11972148, 11972586), (11973040, 11975355), (11973040, 11973557), (11974508, 11974590)] 2021-10-25 09:33:28.022 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11971724, 11973040, 'FBtr0088041_exon_3') contains intron (11972148, 11972586) 2021-10-25 09:33:28.022 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11971724, 11973040, 'FBtr0088042_exon_3') contains intron (11972148, 11972586) 2021-10-25 09:33:28.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088041_exon_3', 'FBtr0088042_exon_3'] 2021-10-25 09:33:28.023 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266652: ['FBtr0344954'] 2021-10-25 09:33:28.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266652 has a single transcript. 2021-10-25 09:33:28.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052564: ['FBtr0074390'] 2021-10-25 09:33:28.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052564 has a single transcript. 2021-10-25 09:33:28.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266653: ['FBtr0344957'] 2021-10-25 09:33:28.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266653 has a single transcript. 2021-10-25 09:33:28.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052568: ['FBtr0301043', 'FBtr0343362'] 2021-10-25 09:33:28.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266654: ['FBtr0344958', 'FBtr0344959'] 2021-10-25 09:33:28.062 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:28.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.064 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035792: ['FBtr0076830'] 2021-10-25 09:33:28.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035792 has a single transcript. 2021-10-25 09:33:28.077 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330333': ['FBtr0300259', 'FBtr0346765']} 2021-10-25 09:33:28.078 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0300259', 'FBtr0346765']] 2021-10-25 09:33:28.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032221: ['FBtr0113033', 'FBtr0452145'] 2021-10-25 09:33:28.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035793: ['FBtr0076791', 'FBtr0076792', 'FBtr0290025', 'FBtr0290026', 'FBtr0305073', 'FBtr0332141', 'FBtr0332142', 'FBtr0332143'] 2021-10-25 09:33:28.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16741183, 16741238), (16741429, 16741523), (16741857, 16741903)] 2021-10-25 09:33:28.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19989853, 19990294)] 2021-10-25 09:33:28.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.093 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19989705, 19990739, 'FBtr0344958_exon_1') contains intron (19989853, 19990294) 2021-10-25 09:33:28.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344958_exon_1'] 2021-10-25 09:33:28.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026575: ['FBtr0074276', 'FBtr0290069', 'FBtr0343571'] 2021-10-25 09:33:28.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039187: ['FBtr0330373', 'FBtr0273323', 'FBtr0273324'] 2021-10-25 09:33:28.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10328410, 10328471), (10328740, 10328803), (10329135, 10329195), (10329262, 10329321), (10329410, 10329474), (10329931, 10329991), (10330592, 10331079)] 2021-10-25 09:33:28.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.140 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0113033': ['FBtr0452145']} 2021-10-25 09:33:28.141 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0452145']] 2021-10-25 09:33:28.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052569: ['FBtr0290248'] 2021-10-25 09:33:28.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052569 has a single transcript. 2021-10-25 09:33:28.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032222: ['FBtr0079992'] 2021-10-25 09:33:28.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032222 has a single transcript. 2021-10-25 09:33:28.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266655: ['FBtr0344961'] 2021-10-25 09:33:28.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266655 has a single transcript. 2021-10-25 09:33:28.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052570: ['FBtr0074326'] 2021-10-25 09:33:28.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052570 has a single transcript. 2021-10-25 09:33:28.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032223: ['FBtr0079993', 'FBtr0333097', 'FBtr0333098'] 2021-10-25 09:33:28.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266656: ['FBtr0344965'] 2021-10-25 09:33:28.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266656 has a single transcript. 2021-10-25 09:33:28.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052571: ['FBtr0074325'] 2021-10-25 09:33:28.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052571 has a single transcript. 2021-10-25 09:33:28.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000662: ['FBtr0087647', 'FBtr0087648', 'FBtr0304696', 'FBtr0304697'] 2021-10-25 09:33:28.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266657: ['FBtr0344964'] 2021-10-25 09:33:28.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266657 has a single transcript. 2021-10-25 09:33:28.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052572: ['FBtr0074324'] 2021-10-25 09:33:28.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052572 has a single transcript. 2021-10-25 09:33:28.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266666: ['FBtr0079403'] 2021-10-25 09:33:28.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266666 has a single transcript. 2021-10-25 09:33:28.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16423627, 16429059), (16429407, 16430620), (16430199, 16430620), (16430764, 16430925), (16432699, 16433164), (16432711, 16433164), (16434138, 16434260), (16434872, 16435144), (16436504, 16436587)] 2021-10-25 09:33:28.186 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16435144, 16438454, 'FBtr0290069_exon_7') contains intron (16436504, 16436587) 2021-10-25 09:33:28.187 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16435144, 16438454, 'FBtr0343571_exon_7') contains intron (16436504, 16436587) 2021-10-25 09:33:28.187 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290069_exon_7', 'FBtr0343571_exon_7'] 2021-10-25 09:33:28.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052573: ['FBtr0074315', 'FBtr0302364'] 2021-10-25 09:33:28.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266667: ['FBtr0076612'] 2021-10-25 09:33:28.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266667 has a single transcript. 2021-10-25 09:33:28.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24349471, 24349525), (24349827, 24349889), (24350235, 24352052), (24350235, 24350726), (24352351, 24353183), (24353523, 24353617), (24354739, 24354792), (24354880, 24354937), (24355324, 24355380), (24355653, 24355715)] 2021-10-25 09:33:28.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266668: ['FBtr0084977', 'FBtr0084978'] 2021-10-25 09:33:28.204 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330373': ['FBtr0273324']} 2021-10-25 09:33:28.204 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0273324']] 2021-10-25 09:33:28.227 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16651530, 16651586), (16652016, 16652078)] 2021-10-25 09:33:28.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10334812, 10335780), (10335924, 10336021), (10336883, 10336944), (10337072, 10337140), (10337293, 10337367), (10337596, 10338018), (10338116, 10338231)] 2021-10-25 09:33:28.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26050115, 26050170), (26050700, 26050759), (26051532, 26051586), (26051917, 26051970), (26051917, 26051973), (26052129, 26052189)] 2021-10-25 09:33:28.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039188: ['FBtr0084629'] 2021-10-25 09:33:28.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039188 has a single transcript. 2021-10-25 09:33:28.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039189: ['FBtr0084628'] 2021-10-25 09:33:28.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039189 has a single transcript. 2021-10-25 09:33:28.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13820969, 13821035), (13821369, 13821432), (13821557, 13823791), (13821557, 13821765), (13822125, 13824283), (13822125, 13824470), (13822175, 13824283)] 2021-10-25 09:33:28.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039190: ['FBtr0084627'] 2021-10-25 09:33:28.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039190 has a single transcript. 2021-10-25 09:33:28.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7511442, 7511510), (7511628, 7511704), (7511916, 7511969), (7511916, 7511972), (7512728, 7512785), (7513392, 7513522), (7513392, 7513817), (7513621, 7513817), (7514354, 7515047), (7514354, 7514648), (7515581, 7515640), (7515777, 7515867), (7515777, 7515825), (7515777, 7515870), (7516050, 7516115), (7516050, 7516118)] 2021-10-25 09:33:28.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039192: ['FBtr0084626'] 2021-10-25 09:33:28.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052574: ['FBtr0074329'] 2021-10-25 09:33:28.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039192 has a single transcript. 2021-10-25 09:33:28.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052574 has a single transcript. 2021-10-25 09:33:28.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052576: ['FBtr0074245', 'FBtr0100556'] 2021-10-25 09:33:28.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039193: ['FBtr0303582'] 2021-10-25 09:33:28.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039193 has a single transcript. 2021-10-25 09:33:28.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026576: ['FBtr0084536', 'FBtr0084537', 'FBtr0084538'] 2021-10-25 09:33:28.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266669: ['FBtr0075231'] 2021-10-25 09:33:28.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266669 has a single transcript. 2021-10-25 09:33:28.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039194: ['FBtr0084614'] 2021-10-25 09:33:28.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039194 has a single transcript. 2021-10-25 09:33:28.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266670: ['FBtr0077519'] 2021-10-25 09:33:28.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266670 has a single transcript. 2021-10-25 09:33:28.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039195: ['FBtr0084624'] 2021-10-25 09:33:28.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039195 has a single transcript. 2021-10-25 09:33:28.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266671: ['FBtr0086709'] 2021-10-25 09:33:28.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266671 has a single transcript. 2021-10-25 09:33:28.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039196: ['FBtr0084623'] 2021-10-25 09:33:28.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039196 has a single transcript. 2021-10-25 09:33:28.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266672: ['FBtr0078677'] 2021-10-25 09:33:28.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266672 has a single transcript. 2021-10-25 09:33:28.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039197: ['FBtr0084621', 'FBtr0084622'] 2021-10-25 09:33:28.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032224: ['FBtr0079998', 'FBtr0310115'] 2021-10-25 09:33:28.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16286134, 16287157), (16287239, 16287957), (16288136, 16288224), (16288316, 16288382)] 2021-10-25 09:33:28.339 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16285952, 16287239, 'FBtr0074245_exon_4') contains intron (16286134, 16287157) 2021-10-25 09:33:28.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074245_exon_4'] 2021-10-25 09:33:28.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266673: ['FBtr0084547'] 2021-10-25 09:33:28.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266673 has a single transcript. 2021-10-25 09:33:28.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266674: ['FBtr0084034'] 2021-10-25 09:33:28.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266674 has a single transcript. 2021-10-25 09:33:28.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266675: ['FBtr0345039', 'FBtr0345040'] 2021-10-25 09:33:28.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24050980, 24051689), (24051755, 24051837)] 2021-10-25 09:33:28.367 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24051689, 24053592, 'FBtr0084536_exon_2') contains intron (24051755, 24051837) 2021-10-25 09:33:28.367 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24051680, 24053592, 'FBtr0084537_exon_1') contains intron (24051755, 24051837) 2021-10-25 09:33:28.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084536_exon_2', 'FBtr0084537_exon_1'] 2021-10-25 09:33:28.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260487: ['FBtr0309307', 'FBtr0300898'] 2021-10-25 09:33:28.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24383467, 24384146), (24383467, 24383529), (24383883, 24384146), (24384263, 24384361), (24384537, 24384614)] 2021-10-25 09:33:28.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10342915, 10342975), (10343354, 10343410), (10343604, 10343658)] 2021-10-25 09:33:28.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.388 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052579: ['FBtr0074225', 'FBtr0331754', 'FBtr0331755'] 2021-10-25 09:33:28.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17529887, 17529975)] 2021-10-25 09:33:28.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27341059, 27360321), (27359452, 27360321), (27360595, 27361054), (27361379, 27361440), (27364326, 27369137), (27369417, 27369478), (27369599, 27370636)] 2021-10-25 09:33:28.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039198: ['FBtr0334917', 'FBtr0334918'] 2021-10-25 09:33:28.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032225: ['FBtr0079999'] 2021-10-25 09:33:28.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032225 has a single transcript. 2021-10-25 09:33:28.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000667: ['FBtr0070345', 'FBtr0070343', 'FBtr0070344', 'FBtr0303048', 'FBtr0310657', 'FBtr0310658', 'FBtr0310659', 'FBtr0333801', 'FBtr0333802'] 2021-10-25 09:33:28.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032228: ['FBtr0080055'] 2021-10-25 09:33:28.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032228 has a single transcript. 2021-10-25 09:33:28.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16323697, 16323773), (16323929, 16324078), (16324209, 16324448), (16324601, 16325611), (16324601, 16324655), (16324601, 16324676)] 2021-10-25 09:33:28.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266676: ['FBtr0345041'] 2021-10-25 09:33:28.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266676 has a single transcript. 2021-10-25 09:33:28.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032229: ['FBtr0080000', 'FBtr0332189'] 2021-10-25 09:33:28.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026577: ['FBtr0346586', 'FBtr0331677'] 2021-10-25 09:33:28.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266677: ['FBtr0345042'] 2021-10-25 09:33:28.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266677 has a single transcript. 2021-10-25 09:33:28.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24386303, 24386365), (24386476, 24389639), (24386476, 24386598), (24386810, 24390037), (24389851, 24390037)] 2021-10-25 09:33:28.477 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.477 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266678: ['FBtr0345043'] 2021-10-25 09:33:28.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266678 has a single transcript. 2021-10-25 09:33:28.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266679: ['FBtr0345044'] 2021-10-25 09:33:28.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266679 has a single transcript. 2021-10-25 09:33:28.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260499: ['FBtr0114575', 'FBtr0339545'] 2021-10-25 09:33:28.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266680: ['FBtr0345045'] 2021-10-25 09:33:28.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266680 has a single transcript. 2021-10-25 09:33:28.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266681: ['FBtr0345048'] 2021-10-25 09:33:28.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266681 has a single transcript. 2021-10-25 09:33:28.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266682: ['FBtr0345049'] 2021-10-25 09:33:28.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266682 has a single transcript. 2021-10-25 09:33:28.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21221786, 21222435), (21222617, 21222677), (21223127, 21223191), (21226422, 21226629), (21228340, 21228458), (21230037, 21230090), (21230194, 21230608)] 2021-10-25 09:33:28.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10356956, 10357009), (10357435, 10357491)] 2021-10-25 09:33:28.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266683: ['FBtr0345050'] 2021-10-25 09:33:28.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266683 has a single transcript. 2021-10-25 09:33:28.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266684: ['FBtr0345051'] 2021-10-25 09:33:28.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266684 has a single transcript. 2021-10-25 09:33:28.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039199: ['FBtr0084617'] 2021-10-25 09:33:28.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039199 has a single transcript. 2021-10-25 09:33:28.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266685: ['FBtr0345052'] 2021-10-25 09:33:28.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266685 has a single transcript. 2021-10-25 09:33:28.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11443112, 11444539), (11444627, 11444683), (11444760, 11446132), (11444760, 11445367), (11445415, 11447155), (11446189, 11447155), (11447208, 11447269), (11447363, 11447526)] 2021-10-25 09:33:28.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039200: ['FBtr0084618', 'FBtr0345301'] 2021-10-25 09:33:28.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266686: ['FBtr0345053'] 2021-10-25 09:33:28.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266686 has a single transcript. 2021-10-25 09:33:28.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266687: ['FBtr0345054'] 2021-10-25 09:33:28.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266687 has a single transcript. 2021-10-25 09:33:28.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052580: ['FBtr0074205'] 2021-10-25 09:33:28.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052580 has a single transcript. 2021-10-25 09:33:28.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266688: ['FBtr0345055'] 2021-10-25 09:33:28.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266688 has a single transcript. 2021-10-25 09:33:28.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032230: ['FBtr0080002', 'FBtr0302490'] 2021-10-25 09:33:28.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052581: ['FBtr0074184', 'FBtr0113439'] 2021-10-25 09:33:28.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266689: ['FBtr0345056', 'FBtr0345057'] 2021-10-25 09:33:28.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026582: ['FBtr0071573'] 2021-10-25 09:33:28.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026582 has a single transcript. 2021-10-25 09:33:28.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24393096, 24393159), (24393098, 24393159), (24393368, 24393429)] 2021-10-25 09:33:28.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026592: ['FBtr0073157', 'FBtr0333140'] 2021-10-25 09:33:28.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035795: ['FBtr0076829'] 2021-10-25 09:33:28.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035795 has a single transcript. 2021-10-25 09:33:28.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035797: ['FBtr0290223'] 2021-10-25 09:33:28.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035797 has a single transcript. 2021-10-25 09:33:28.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260632: ['FBtr0301383', 'FBtr0301384', 'FBtr0340250', 'FBtr0081005', 'FBtr0081006', 'FBtr0081007'] 2021-10-25 09:33:28.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10364582, 10365031), (10364597, 10365031), (10365190, 10365264), (10365428, 10365489), (10365680, 10365770)] 2021-10-25 09:33:28.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035798: ['FBtr0301221', 'FBtr0301222', 'FBtr0290277', 'FBtr0331839', 'FBtr0331840'] 2021-10-25 09:33:28.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15797371, 15797436), (15797603, 15797666), (15798271, 15799053), (15798271, 15798970)] 2021-10-25 09:33:28.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16689507, 16697308), (16689507, 16689645)] 2021-10-25 09:33:28.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039201: ['FBtr0084641', 'FBtr0334333'] 2021-10-25 09:33:28.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3892989, 3893532), (3893914, 3893977), (3894114, 3894168)] 2021-10-25 09:33:28.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.653 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.655 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2025699, 2025774), (2026909, 2027183), (2026909, 2027283), (2027189, 2027283), (2027462, 2027520), (2027871, 2027934), (2028027, 2029840), (2028027, 2028664), (2028027, 2029774), (2028750, 2030214), (2029926, 2030214), (2030368, 2030442), (2030859, 2034954), (2035195, 2036406), (2035198, 2042046), (2035198, 2036406), (2035201, 2036580), (2035201, 2036406), (2035201, 2042046), (2035411, 2036406)] 2021-10-25 09:33:28.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.659 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032231: ['FBtr0080003'] 2021-10-25 09:33:28.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032231 has a single transcript. 2021-10-25 09:33:28.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052582: ['FBtr0472957', 'FBtr0472956', 'FBtr0472955'] 2021-10-25 09:33:28.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266690: ['FBtr0345126'] 2021-10-25 09:33:28.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266690 has a single transcript. 2021-10-25 09:33:28.695 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24515688, 24515746), (24516531, 24516589), (24517320, 24517375), (24517532, 24517590)] 2021-10-25 09:33:28.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032233: ['FBtr0080004', 'FBtr0332191', 'FBtr0332192'] 2021-10-25 09:33:28.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266691: ['FBtr0345061'] 2021-10-25 09:33:28.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266691 has a single transcript. 2021-10-25 09:33:28.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266692: ['FBtr0345062', 'FBtr0345063'] 2021-10-25 09:33:28.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026593: ['FBtr0072912', 'FBtr0308230', 'FBtr0308231'] 2021-10-25 09:33:28.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7562639, 7563008), (7562692, 7563008), (7563133, 7564167), (7564986, 7565048), (7565171, 7565239), (7566196, 7566769), (7567753, 7567821), (7568819, 7568873), (7568976, 7569075), (7569206, 7569273)] 2021-10-25 09:33:28.746 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7565239, 7567753, 'FBtr0301221_exon_5') contains intron (7566196, 7566769) 2021-10-25 09:33:28.747 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7562609, 7563133, 'FBtr0301222_exon_1') contains intron (7562639, 7563008) 2021-10-25 09:33:28.747 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7565239, 7567753, 'FBtr0301222_exon_4') contains intron (7566196, 7566769) 2021-10-25 09:33:28.747 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7565239, 7567753, 'FBtr0290277_exon_5') contains intron (7566196, 7566769) 2021-10-25 09:33:28.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301221_exon_5', 'FBtr0301222_exon_1', 'FBtr0301222_exon_4', 'FBtr0290277_exon_5'] 2021-10-25 09:33:28.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25843958, 25844007), (25844121, 25844171), (25844121, 25844287)] 2021-10-25 09:33:28.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039202: ['FBtr0289971'] 2021-10-25 09:33:28.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039202 has a single transcript. 2021-10-25 09:33:28.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15835623, 15836115), (15836208, 15836281), (15836397, 15836456), (15836397, 15836524), (15836674, 15836737)] 2021-10-25 09:33:28.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15836281, 15836674, 'FBtr0472955_exon_3') contains intron (15836397, 15836456) 2021-10-25 09:33:28.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0472955_exon_3'] 2021-10-25 09:33:28.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17437323, 17437418), (17438017, 17438149), (17438212, 17439189), (17439297, 17441800), (17441879, 17441939), (17442334, 17442403), (17442582, 17442651), (17443005, 17445248), (17443005, 17448277), (17443005, 17449295), (17449368, 17449875), (17449368, 17450219)] 2021-10-25 09:33:28.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17438645, 17441879, 'FBtr0340250_exon_5') contains intron (17439297, 17441800) 2021-10-25 09:33:28.761 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17438645, 17441879, 'FBtr0081007_exon_6') contains intron (17439297, 17441800) 2021-10-25 09:33:28.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340250_exon_5', 'FBtr0081007_exon_6'] 2021-10-25 09:33:28.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10376553, 10377247), (10376553, 10376765), (10376884, 10377247), (10377388, 10377796), (10377942, 10378010), (10378221, 10378287), (10378399, 10378490), (10378864, 10378922)] 2021-10-25 09:33:28.765 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10376477, 10376884, 'FBtr0080004_exon_1') contains intron (10376553, 10376765) 2021-10-25 09:33:28.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080004_exon_1'] 2021-10-25 09:33:28.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039203: ['FBtr0084643'] 2021-10-25 09:33:28.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039203 has a single transcript. 2021-10-25 09:33:28.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2190410, 2191939), (2190410, 2191141), (2191322, 2191678), (2191322, 2191939)] 2021-10-25 09:33:28.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039204: ['FBtr0084644'] 2021-10-25 09:33:28.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039204 has a single transcript. 2021-10-25 09:33:28.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039205: ['FBtr0084679', 'FBtr0334337'] 2021-10-25 09:33:28.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266693: ['FBtr0345080'] 2021-10-25 09:33:28.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266693 has a single transcript. 2021-10-25 09:33:28.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266694: ['FBtr0345081', 'FBtr0345082', 'FBtr0345083'] 2021-10-25 09:33:28.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24530196, 24530257)] 2021-10-25 09:33:28.830 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.831 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032234: ['FBtr0080005', 'FBtr0332193'] 2021-10-25 09:33:28.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052588: ['FBtr0074025'] 2021-10-25 09:33:28.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052588 has a single transcript. 2021-10-25 09:33:28.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052590: ['FBtr0073988'] 2021-10-25 09:33:28.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052590 has a single transcript. 2021-10-25 09:33:28.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052591: ['FBtr0073973', 'FBtr0343378'] 2021-10-25 09:33:28.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026597: ['FBtr0085553', 'FBtr0085554', 'FBtr0085555', 'FBtr0290030', 'FBtr0300600', 'FBtr0334702', 'FBtr0334703'] 2021-10-25 09:33:28.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039207: ['FBtr0089906', 'FBtr0306025'] 2021-10-25 09:33:28.888 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(826885, 826945), (827001, 827181), (827236, 827422), (827469, 827645), (827697, 827876), (829851, 830033)] 2021-10-25 09:33:28.889 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10380813, 10380912), (10381110, 10381162), (10381322, 10381376)] 2021-10-25 09:33:28.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:28.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24537222, 24537286), (24537983, 24538048), (24538928, 24538991), (24540817, 24540882), (24541067, 24541119), (24541251, 24541357), (24541591, 24543330), (24541591, 24543699)] 2021-10-25 09:33:28.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:28.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:28.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035799: ['FBtr0076801'] 2021-10-25 09:33:28.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035799 has a single transcript. 2021-10-25 09:33:28.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035800: ['FBtr0076824'] 2021-10-25 09:33:28.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035800 has a single transcript. 2021-10-25 09:33:28.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032235: ['FBtr0080006'] 2021-10-25 09:33:28.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032235 has a single transcript. 2021-10-25 09:33:28.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035802: ['FBtr0089850', 'FBtr0089851', 'FBtr0089849', 'FBtr0334064'] 2021-10-25 09:33:28.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032236: ['FBtr0080007', 'FBtr0332194'] 2021-10-25 09:33:28.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052594: ['FBtr0073956', 'FBtr0073957', 'FBtr0310270'] 2021-10-25 09:33:28.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039209: ['FBtr0084672', 'FBtr0084673', 'FBtr0084674', 'FBtr0084675', 'FBtr0110795', 'FBtr0110796', 'FBtr0345204'] 2021-10-25 09:33:29.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260634: ['FBtr0089623', 'FBtr0344335'] 2021-10-25 09:33:29.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10386787, 10386861)] 2021-10-25 09:33:29.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000709: ['FBtr0077192'] 2021-10-25 09:33:29.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000709 has a single transcript. 2021-10-25 09:33:29.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30023840, 30024426), (30024622, 30025465), (30025539, 30030763), (30027576, 30030763), (30031046, 30031111), (30031344, 30031422), (30032112, 30032930), (30032112, 30032673), (30032811, 30032930), (30033027, 30033084), (30033216, 30033280), (30033539, 30033598), (30033743, 30033822), (30033743, 30033804), (30034125, 30034187)] 2021-10-25 09:33:29.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266696: ['FBtr0345085', 'FBtr0345086', 'FBtr0345087', 'FBtr0345088', 'FBtr0345089', 'FBtr0345090', 'FBtr0345091', 'FBtr0345092', 'FBtr0345093', 'FBtr0345094', 'FBtr0345095', 'FBtr0345096', 'FBtr0345097', 'FBtr0345098', 'FBtr0345099', 'FBtr0345100', 'FBtr0345101', 'FBtr0345102', 'FBtr0345103', 'FBtr0345104', 'FBtr0345105', 'FBtr0345106', 'FBtr0345107', 'FBtr0345108', 'FBtr0345109', 'FBtr0345110', 'FBtr0345111', 'FBtr0345112', 'FBtr0345113', 'FBtr0345114', 'FBtr0345115'] 2021-10-25 09:33:29.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23812585, 23812699), (23813814, 23814012), (23814915, 23814968), (23815106, 23815240), (23817030, 23818226), (23818611, 23818980)] 2021-10-25 09:33:29.044 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30031111, 30032112, 'FBtr0300600_exon_3') contains intron (30031344, 30031422) 2021-10-25 09:33:29.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300600_exon_3'] 2021-10-25 09:33:29.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000711: ['FBtr0071446', 'FBtr0071447', 'FBtr0333305'] 2021-10-25 09:33:29.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7593445, 7602787), (7597403, 7602787), (7603489, 7603668), (7603962, 7616107), (7605531, 7616107), (7616231, 7616903), (7617602, 7619787), (7619871, 7620264), (7620388, 7624597), (7624934, 7625366), (7625996, 7635680), (7633612, 7635680), (7635806, 7635873), (7636463, 7636525), (7636690, 7636747), (7637480, 7637687), (7637901, 7637958), (7638075, 7638156), (7638567, 7638840)] 2021-10-25 09:33:29.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15024954, 15030585), (15030847, 15030910), (15031068, 15031177), (15031467, 15031542), (15032573, 15033605), (15033347, 15033605), (15034140, 15041615)] 2021-10-25 09:33:29.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032240: ['FBtr0100253', 'FBtr0304111'] 2021-10-25 09:33:29.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260635: ['FBtr0075499', 'FBtr0075500', 'FBtr0075501', 'FBtr0333617', 'FBtr0333618', 'FBtr0333619'] 2021-10-25 09:33:29.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10386563, 10388442), (10386563, 10406352), (10388835, 10406352), (10406700, 10406761), (10407105, 10407165), (10407300, 10407365)] 2021-10-25 09:33:29.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10403556, 10403729), (10403828, 10403890), (10403932, 10403992), (10404550, 10404610), (10404754, 10404828)] 2021-10-25 09:33:29.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24560317, 24560381), (24560507, 24560566), (24560822, 24560889), (24562942, 24582712), (24562942, 24576463), (24562942, 24571290), (24576518, 24582712), (24576518, 24577176)] 2021-10-25 09:33:29.153 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24560381, 24560822, 'FBtr0084672_exon_4') contains intron (24560507, 24560566) 2021-10-25 09:33:29.153 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24560381, 24560822, 'FBtr0084673_exon_3') contains intron (24560507, 24560566) 2021-10-25 09:33:29.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24560381, 24560822, 'FBtr0084674_exon_4') contains intron (24560507, 24560566) 2021-10-25 09:33:29.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24560381, 24560822, 'FBtr0084675_exon_3') contains intron (24560507, 24560566) 2021-10-25 09:33:29.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24560381, 24560822, 'FBtr0345204_exon_3') contains intron (24560507, 24560566) 2021-10-25 09:33:29.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084672_exon_4', 'FBtr0084673_exon_3', 'FBtr0084674_exon_4', 'FBtr0084675_exon_3', 'FBtr0345204_exon_3'] 2021-10-25 09:33:29.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052598: ['FBtr0073918'] 2021-10-25 09:33:29.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052598 has a single transcript. 2021-10-25 09:33:29.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032242: ['FBtr0080047'] 2021-10-25 09:33:29.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032242 has a single transcript. 2021-10-25 09:33:29.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052600: ['FBtr0073913', 'FBtr0343518'] 2021-10-25 09:33:29.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032243: ['FBtr0080018', 'FBtr0302038', 'FBtr0302039', 'FBtr0331642'] 2021-10-25 09:33:29.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035805: ['FBtr0076822'] 2021-10-25 09:33:29.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035805 has a single transcript. 2021-10-25 09:33:29.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035806: ['FBtr0076807'] 2021-10-25 09:33:29.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035806 has a single transcript. 2021-10-25 09:33:29.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035807: ['FBtr0076821'] 2021-10-25 09:33:29.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035807 has a single transcript. 2021-10-25 09:33:29.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000715: ['FBtr0088383'] 2021-10-25 09:33:29.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000715 has a single transcript. 2021-10-25 09:33:29.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035811: ['FBtr0076808'] 2021-10-25 09:33:29.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035811 has a single transcript. 2021-10-25 09:33:29.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035812: ['FBtr0076814', 'FBtr0346912'] 2021-10-25 09:33:29.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000719: ['FBtr0077342', 'FBtr0100538', 'FBtr0333179', 'FBtr0333180', 'FBtr0333181', 'FBtr0333182'] 2021-10-25 09:33:29.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16040065, 16042785), (16040065, 16042406), (16040065, 16050457), (16040065, 16046484), (16040065, 16040437), (16043071, 16046484)] 2021-10-25 09:33:29.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14322915, 14324737), (14322915, 14355462), (14324858, 14355462), (14355542, 14389604), (14389682, 14408205), (14408321, 14425186), (14425356, 14444316), (14444527, 14452968), (14453096, 14454060), (14454229, 14459156)] 2021-10-25 09:33:29.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7722982, 7723049), (7723225, 7723283), (7725797, 7725851), (7726023, 7726084)] 2021-10-25 09:33:29.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10414121, 10414593), (10414141, 10414593), (10414657, 10414780), (10414919, 10414983), (10415408, 10415469), (10416040, 10416103), (10416446, 10416504), (10416636, 10416690), (10416636, 10416693), (10416882, 10416945), (10417148, 10417210), (10418193, 10418256), (10418338, 10418404)] 2021-10-25 09:33:29.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052601: ['FBtr0073914'] 2021-10-25 09:33:29.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052601 has a single transcript. 2021-10-25 09:33:29.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052602: ['FBtr0073911'] 2021-10-25 09:33:29.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052602 has a single transcript. 2021-10-25 09:33:29.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052603: ['FBtr0073894'] 2021-10-25 09:33:29.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052603 has a single transcript. 2021-10-25 09:33:29.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026598: ['FBtr0084552', 'FBtr0445404', 'FBtr0445405'] 2021-10-25 09:33:29.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035813: ['FBtr0306682'] 2021-10-25 09:33:29.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035813 has a single transcript. 2021-10-25 09:33:29.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052625: ['FBtr0073839'] 2021-10-25 09:33:29.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052625 has a single transcript. 2021-10-25 09:33:29.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035815: ['FBtr0110885', 'FBtr0301205', 'FBtr0334649'] 2021-10-25 09:33:29.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052626: ['FBtr0073833', 'FBtr0309245', 'FBtr0309246', 'FBtr0340444', 'FBtr0340445', 'FBtr0301044', 'FBtr0301045', 'FBtr0301046', 'FBtr0303292'] 2021-10-25 09:33:29.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22829277, 22844758), (22829277, 22853806), (22829277, 22836187), (22844901, 22855042), (22844901, 22853806), (22854332, 22855042), (22854332, 22855154)] 2021-10-25 09:33:29.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22853806, 22855194, 'FBtr0077342_exon_1') contains intron (22854332, 22855042) 2021-10-25 09:33:29.380 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22853806, 22855194, 'FBtr0333179_exon_1') contains intron (22854332, 22855042) 2021-10-25 09:33:29.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077342_exon_1', 'FBtr0333179_exon_1'] 2021-10-25 09:33:29.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.404 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24164404, 24164464), (24164809, 24164872), (24167086, 24167283)] 2021-10-25 09:33:29.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24163965, 24164809, 'FBtr0084552_exon_1') contains intron (24164404, 24164464) 2021-10-25 09:33:29.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24163965, 24164809, 'FBtr0445405_exon_1') contains intron (24164404, 24164464) 2021-10-25 09:33:29.405 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084552_exon_1', 'FBtr0445405_exon_1'] 2021-10-25 09:33:29.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.413 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7733629, 7733690), (7733816, 7733881), (7734000, 7736108), (7736541, 7736608), (7736869, 7738334), (7736869, 7738106), (7738244, 7738334), (7738482, 7738538), (7738696, 7741967)] 2021-10-25 09:33:29.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.414 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039210: ['FBtr0084671'] 2021-10-25 09:33:29.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039210 has a single transcript. 2021-10-25 09:33:29.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032244: ['FBtr0080019'] 2021-10-25 09:33:29.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032244 has a single transcript. 2021-10-25 09:33:29.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039212: ['FBtr0084670'] 2021-10-25 09:33:29.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039212 has a single transcript. 2021-10-25 09:33:29.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032246: ['FBtr0080020', 'FBtr0304117'] 2021-10-25 09:33:29.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039213: ['FBtr0084656', 'FBtr0084657', 'FBtr0345218'] 2021-10-25 09:33:29.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10423346, 10423428), (10423680, 10423750), (10424098, 10424370), (10424483, 10424543), (10424670, 10424733), (10424930, 10424991)] 2021-10-25 09:33:29.483 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10423333, 10423680, 'FBtr0080020_exon_1') contains intron (10423346, 10423428) 2021-10-25 09:33:29.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080020_exon_1'] 2021-10-25 09:33:29.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260639: ['FBtr0077641'] 2021-10-25 09:33:29.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260639 has a single transcript. 2021-10-25 09:33:29.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260642: ['FBtr0081646', 'FBtr0081647', 'FBtr0081648', 'FBtr0081649', 'FBtr0081650', 'FBtr0081651', 'FBtr0081652', 'FBtr0081653', 'FBtr0081654', 'FBtr0081655', 'FBtr0081656'] 2021-10-25 09:33:29.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24625812, 24631782), (24630750, 24631782), (24632091, 24632156), (24633370, 24633432), (24633499, 24633557)] 2021-10-25 09:33:29.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035816: ['FBtr0076809', 'FBtr0331171', 'FBtr0334644', 'FBtr0346865'] 2021-10-25 09:33:29.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026602: ['FBtr0089050'] 2021-10-25 09:33:29.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026602 has a single transcript. 2021-10-25 09:33:29.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032247: ['FBtr0080024'] 2021-10-25 09:33:29.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032247 has a single transcript. 2021-10-25 09:33:29.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026616: ['FBtr0083179', 'FBtr0334593', 'FBtr0345238'] 2021-10-25 09:33:29.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032248: ['FBtr0080044'] 2021-10-25 09:33:29.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032248 has a single transcript. 2021-10-25 09:33:29.559 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13831100, 13831167), (13831278, 13831339), (13831634, 13831701), (13832156, 13832216), (13832673, 13832745), (13832840, 13832903), (13833022, 13834170), (13833022, 13834814), (13833031, 13834170), (13833031, 13834814), (13834206, 13834814), (13835149, 13837612), (13835149, 13835377), (13837757, 13839565), (13837757, 13837851), (13837757, 13839561), (13837757, 13845351)] 2021-10-25 09:33:29.560 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13832903, 13835149, 'FBtr0309245_exon_3') contains intron (13833022, 13834170) 2021-10-25 09:33:29.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309245_exon_3'] 2021-10-25 09:33:29.562 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032249: ['FBtr0080043'] 2021-10-25 09:33:29.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032249 has a single transcript. 2021-10-25 09:33:29.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032250: ['FBtr0080026'] 2021-10-25 09:33:29.573 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032250 has a single transcript. 2021-10-25 09:33:29.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032251: ['FBtr0273339', 'FBtr0301167'] 2021-10-25 09:33:29.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:29.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15804605, 15818915), (15811052, 15818915), (15812307, 15818915), (15819424, 15819483), (15821503, 15821562), (15822106, 15822165)] 2021-10-25 09:33:29.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.628 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076809': ['FBtr0331171', 'FBtr0346865']} 2021-10-25 09:33:29.629 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331171', 'FBtr0346865']] 2021-10-25 09:33:29.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10439619, 10439670), (10439888, 10439944), (10440112, 10440175), (10440505, 10440560)] 2021-10-25 09:33:29.630 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039214: ['FBtr0084667', 'FBtr0084668', 'FBtr0330308', 'FBtr0330309', 'FBtr0306172', 'FBtr0339135'] 2021-10-25 09:33:29.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000721: ['FBtr0089306', 'FBtr0089307', 'FBtr0100363', 'FBtr0089310', 'FBtr0089308', 'FBtr0089309', 'FBtr0089312', 'FBtr0089304', 'FBtr0301399', 'FBtr0446099'] 2021-10-25 09:33:29.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035817: ['FBtr0076810'] 2021-10-25 09:33:29.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035817 has a single transcript. 2021-10-25 09:33:29.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035823: ['FBtr0076747'] 2021-10-25 09:33:29.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035823 has a single transcript. 2021-10-25 09:33:29.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032252: ['FBtr0080029', 'FBtr0337001', 'FBtr0304134'] 2021-10-25 09:33:29.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035824: ['FBtr0076748'] 2021-10-25 09:33:29.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035824 has a single transcript. 2021-10-25 09:33:29.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035825: ['FBtr0076770'] 2021-10-25 09:33:29.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035825 has a single transcript. 2021-10-25 09:33:29.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035827: ['FBtr0076750'] 2021-10-25 09:33:29.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035827 has a single transcript. 2021-10-25 09:33:29.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035829: ['FBtr0076764', 'FBtr0076765'] 2021-10-25 09:33:29.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026619: ['FBtr0087862', 'FBtr0087863', 'FBtr0087864', 'FBtr0302455'] 2021-10-25 09:33:29.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6898538, 6908524), (6898538, 6908512), (6908738, 6908872), (6908738, 6909289), (6908911, 6909289), (6910066, 6910219), (6910471, 6970582), (6910471, 6931518), (6970670, 6998205)] 2021-10-25 09:33:29.743 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.743 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10442802, 10444751), (10444785, 10445160), (10445236, 10445508), (10446032, 10446184), (10446366, 10446522), (10446680, 10447780), (10447721, 10447780), (10447982, 10448048), (10448230, 10448291), (10449299, 10449364), (10449515, 10449578), (10449515, 10449581)] 2021-10-25 09:33:29.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2377931, 2434625), (2379443, 2402554), (2388781, 2402554), (2400616, 2402554), (2406599, 2434625), (2412303, 2434625), (2414111, 2434625), (2414111, 2415390), (2415464, 2434625), (2418335, 2434625), (2429429, 2434625), (2435132, 2439498), (2436228, 2439498), (2439415, 2439498), (2439830, 2444498), (2439830, 2442435), (2439830, 2442438), (2439830, 2443389), (2442960, 2443389), (2443838, 2443987), (2444087, 2444498), (2446101, 2459590), (2456916, 2459590), (2458275, 2459590), (2460153, 2461145), (2461268, 2463056), (2461268, 2465102), (2462984, 2463056), (2465577, 2465969), (2465577, 2484563), (2467269, 2484563), (2483376, 2484563), (2484837, 2485072), (2485228, 2495010), (2494765, 2495010), (2495152, 2495218), (2495729, 2495800), (2495958, 2496017), (2498036, 2498098), (2498346, 2498405)] 2021-10-25 09:33:29.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2465102, 2466353, 'FBtr0345086_exon_10') contains intron (2465577, 2465969) 2021-10-25 09:33:29.765 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2465102, 2466353, 'FBtr0345089_exon_10') contains intron (2465577, 2465969) 2021-10-25 09:33:29.766 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2465102, 2466353, 'FBtr0345091_exon_4') contains intron (2465577, 2465969) 2021-10-25 09:33:29.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7975687, 7975761)] 2021-10-25 09:33:29.766 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7975437, 7976154, 'FBtr0076765_exon_1') contains intron (7975687, 7975761) 2021-10-25 09:33:29.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076765_exon_1'] 2021-10-25 09:33:29.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2465102, 2466353, 'FBtr0345097_exon_4') contains intron (2465577, 2465969) 2021-10-25 09:33:29.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24637197, 24637297), (24637224, 24637297), (24637635, 24637703), (24638673, 24638740), (24639093, 24639154), (24639341, 24639419), (24639345, 24639423), (24639595, 24639658), (24639764, 24639823), (24640223, 24640449), (24640632, 24640698), (24640969, 24641030), (24641218, 24641276), (24641400, 24641461), (24642114, 24642172), (24642359, 24642412), (24645685, 24645744), (24646631, 24646692), (24647602, 24647678), (24648390, 24648507), (24649545, 24649643), (24649920, 24649993), (24649920, 24649999)] 2021-10-25 09:33:29.769 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24649643, 24650043, 'FBtr0084668_exon_1') contains intron (24649920, 24649993) 2021-10-25 09:33:29.769 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2465102, 2466353, 'FBtr0345101_exon_10') contains intron (2465577, 2465969) 2021-10-25 09:33:29.769 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24649643, 24650043, 'FBtr0330309_exon_1') contains intron (24649920, 24649993) 2021-10-25 09:33:29.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24649643, 24650043, 'FBtr0306172_exon_1') contains intron (24649920, 24649993) 2021-10-25 09:33:29.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24649643, 24650043, 'FBtr0339135_exon_1') contains intron (24649920, 24649993) 2021-10-25 09:33:29.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084668_exon_1', 'FBtr0330309_exon_1', 'FBtr0306172_exon_1', 'FBtr0339135_exon_1'] 2021-10-25 09:33:29.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345086_exon_10', 'FBtr0345089_exon_10', 'FBtr0345091_exon_4', 'FBtr0345097_exon_4', 'FBtr0345101_exon_10'] 2021-10-25 09:33:29.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.792 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084668': ['FBtr0330309']} 2021-10-25 09:33:29.792 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330309']] 2021-10-25 09:33:29.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12753353, 12753427), (12753816, 12753890), (12754127, 12754407), (12754750, 12755935), (12754750, 12754825), (12754750, 12755075)] 2021-10-25 09:33:29.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035830: ['FBtr0076753'] 2021-10-25 09:33:29.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035830 has a single transcript. 2021-10-25 09:33:29.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035831: ['FBtr0076763'] 2021-10-25 09:33:29.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035831 has a single transcript. 2021-10-25 09:33:29.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035833: ['FBtr0076738'] 2021-10-25 09:33:29.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035833 has a single transcript. 2021-10-25 09:33:29.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035838: ['FBtr0076687'] 2021-10-25 09:33:29.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035838 has a single transcript. 2021-10-25 09:33:29.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035839: ['FBtr0076736'] 2021-10-25 09:33:29.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035839 has a single transcript. 2021-10-25 09:33:29.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035842: ['FBtr0273367', 'FBtr0273368'] 2021-10-25 09:33:29.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032253: ['FBtr0080042', 'FBtr0321259'] 2021-10-25 09:33:29.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3622943, 3623005), (3623195, 3623261), (3623881, 3624223), (3624373, 3624439), (3624676, 3625996), (3626216, 3626336), (3626216, 3634238), (3627525, 3631804), (3627635, 3631974), (3627635, 3631962), (3627635, 3631522), (3634405, 3638938), (3640517, 3645855), (3640517, 3655269), (3655585, 3656721), (3655585, 3656707)] 2021-10-25 09:33:29.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3625996, 3627635, 'FBtr0089306_exon_2') contains intron (3626216, 3626336) 2021-10-25 09:33:29.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3625996, 3627635, 'FBtr0100363_exon_2') contains intron (3626216, 3626336) 2021-10-25 09:33:29.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089306_exon_2', 'FBtr0100363_exon_2'] 2021-10-25 09:33:29.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8131934, 8131996), (8133618, 8133690), (8133792, 8133849), (8133986, 8134046), (8135040, 8135891), (8135817, 8135891), (8136969, 8137030), (8137246, 8137322), (8137265, 8137322)] 2021-10-25 09:33:29.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10453915, 10453975), (10454193, 10454250), (10454861, 10454953), (10455424, 10455475), (10455846, 10455910), (10456198, 10457191)] 2021-10-25 09:33:29.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:29.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052631: ['FBtr0073799'] 2021-10-25 09:33:29.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052631 has a single transcript. 2021-10-25 09:33:29.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052633: ['FBtr0073800', 'FBtr0310431'] 2021-10-25 09:33:29.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035844: ['FBtr0076732', 'FBtr0332761'] 2021-10-25 09:33:29.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039215: ['FBtr0089915', 'FBtr0089916'] 2021-10-25 09:33:29.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032256: ['FBtr0080032', 'FBtr0337002', 'FBtr0337003', 'FBtr0304133'] 2021-10-25 09:33:29.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026620: ['FBtr0089950', 'FBtr0089951', 'FBtr0089949', 'FBtr0089953', 'FBtr0089955', 'FBtr0089952', 'FBtr0302613', 'FBtr0302614', 'FBtr0302615', 'FBtr0302616', 'FBtr0306654', 'FBtr0332445', 'FBtr0332446'] 2021-10-25 09:33:29.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13561717, 13561965)] 2021-10-25 09:33:29.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:29.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.013 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8142543, 8142611), (8142818, 8143407), (8144710, 8145005), (8145139, 8145424), (8145539, 8145845), (8145940, 8146007), (8146195, 8146375), (8146451, 8151167), (8151302, 8151756)] 2021-10-25 09:33:30.013 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8142611, 8144710, 'FBtr0076732_exon_8') contains intron (8142818, 8143407) 2021-10-25 09:33:30.014 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076732_exon_8'] 2021-10-25 09:33:30.014 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.014 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24655480, 24655571), (24657410, 24657515), (24657568, 24658320), (24657609, 24658320), (24658411, 24658498), (24658604, 24658660)] 2021-10-25 09:33:30.015 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.015 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052636: ['FBtr0347127'] 2021-10-25 09:33:30.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052636 has a single transcript. 2021-10-25 09:33:30.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052638: ['FBtr0300453'] 2021-10-25 09:33:30.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052638 has a single transcript. 2021-10-25 09:33:30.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052639: ['FBtr0073734'] 2021-10-25 09:33:30.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052639 has a single transcript. 2021-10-25 09:33:30.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052640: ['FBtr0073728'] 2021-10-25 09:33:30.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052640 has a single transcript. 2021-10-25 09:33:30.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10477183, 10477316), (10477592, 10481097), (10481284, 10481347), (10481570, 10481621), (10481570, 10481646), (10481709, 10481762), (10481983, 10482042), (10482233, 10482284), (10482574, 10482624), (10482574, 10482636), (10482786, 10482844)] 2021-10-25 09:33:30.062 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10477072, 10477592, 'FBtr0080032_exon_1') contains intron (10477183, 10477316) 2021-10-25 09:33:30.063 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10477072, 10477592, 'FBtr0337003_exon_1') contains intron (10477183, 10477316) 2021-10-25 09:33:30.063 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10477072, 10477592, 'FBtr0304133_exon_1') contains intron (10477183, 10477316) 2021-10-25 09:33:30.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080032_exon_1', 'FBtr0337003_exon_1', 'FBtr0304133_exon_1'] 2021-10-25 09:33:30.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052641: ['FBtr0073729'] 2021-10-25 09:33:30.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052641 has a single transcript. 2021-10-25 09:33:30.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039217: ['FBtr0084686', 'FBtr0084687', 'FBtr0339251'] 2021-10-25 09:33:30.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052642: ['FBtr0305598', 'FBtr0346281'] 2021-10-25 09:33:30.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035845: ['FBtr0300119', 'FBtr0330087'] 2021-10-25 09:33:30.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12959549, 12959632), (12960477, 12960552)] 2021-10-25 09:33:30.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8161357, 8161422), (8161545, 8164219), (8164459, 8165430)] 2021-10-25 09:33:30.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24713097, 24715049), (24714983, 24715049), (24715607, 24715975), (24715607, 24715717), (24717085, 24717146)] 2021-10-25 09:33:30.135 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052643: ['FBtr0073716'] 2021-10-25 09:33:30.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052643 has a single transcript. 2021-10-25 09:33:30.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035847: ['FBtr0076726', 'FBtr0076727'] 2021-10-25 09:33:30.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052644: ['FBtr0305599'] 2021-10-25 09:33:30.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052644 has a single transcript. 2021-10-25 09:33:30.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052645: ['FBtr0073725'] 2021-10-25 09:33:30.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052645 has a single transcript. 2021-10-25 09:33:30.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260643: ['FBtr0300948'] 2021-10-25 09:33:30.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260643 has a single transcript. 2021-10-25 09:33:30.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260644: ['FBtr0300949'] 2021-10-25 09:33:30.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260644 has a single transcript. 2021-10-25 09:33:30.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052647: ['FBtr0073702', 'FBtr0073703', 'FBtr0340412', 'FBtr0346126'] 2021-10-25 09:33:30.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032258: ['FBtr0080038'] 2021-10-25 09:33:30.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032258 has a single transcript. 2021-10-25 09:33:30.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260645: ['FBtr0301001'] 2021-10-25 09:33:30.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260645 has a single transcript. 2021-10-25 09:33:30.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032259: ['FBtr0100565', 'FBtr0304137'] 2021-10-25 09:33:30.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260646: ['FBtr0301002'] 2021-10-25 09:33:30.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260646 has a single transcript. 2021-10-25 09:33:30.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260648: ['FBtr0077883', 'FBtr0345430'] 2021-10-25 09:33:30.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8178874, 8178937), (8179112, 8179176), (8179428, 8179489), (8179666, 8179841), (8179989, 8180037)] 2021-10-25 09:33:30.237 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8179841, 8180514, 'FBtr0076726_exon_1') contains intron (8179989, 8180037) 2021-10-25 09:33:30.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039218: ['FBtr0084688'] 2021-10-25 09:33:30.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039218 has a single transcript. 2021-10-25 09:33:30.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076726_exon_1'] 2021-10-25 09:33:30.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039219: ['FBtr0084745'] 2021-10-25 09:33:30.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039219 has a single transcript. 2021-10-25 09:33:30.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4734853, 4735164), (4735346, 4735407), (4735557, 4735641), (4735803, 4737022), (4737127, 4737180), (4737252, 4737313), (4737375, 4737472), (4737378, 4737472), (4737738, 4741851), (4737738, 4739510), (4737738, 4739571), (4737780, 4741851), (4737780, 4739571), (4737780, 4739510), (4744182, 4744463), (4744665, 4745796), (4744665, 4748355), (4744665, 4745841), (4744665, 4748790), (4748548, 4748790)] 2021-10-25 09:33:30.249 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089950_exon_8') contains intron (4734853, 4735164) 2021-10-25 09:33:30.249 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089951_exon_8') contains intron (4734853, 4735164) 2021-10-25 09:33:30.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089949_exon_8') contains intron (4734853, 4735164) 2021-10-25 09:33:30.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089953_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089955_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.251 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0089952_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.251 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4733653, 4735346, 'FBtr0302613_exon_8') contains intron (4734853, 4735164) 2021-10-25 09:33:30.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0302614_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0302615_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4733653, 4735346, 'FBtr0302616_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.253 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0306654_exon_10') contains intron (4734853, 4735164) 2021-10-25 09:33:30.254 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4734411, 4735346, 'FBtr0332446_exon_11') contains intron (4734853, 4735164) 2021-10-25 09:33:30.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089950_exon_8', 'FBtr0089951_exon_8', 'FBtr0089949_exon_8', 'FBtr0089953_exon_10', 'FBtr0089955_exon_10', 'FBtr0089952_exon_10', 'FBtr0302613_exon_8', 'FBtr0302614_exon_10', 'FBtr0302615_exon_10', 'FBtr0302616_exon_10', 'FBtr0306654_exon_10', 'FBtr0332446_exon_11'] 2021-10-25 09:33:30.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039223: ['FBtr0084743', 'FBtr0339255'] 2021-10-25 09:33:30.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10488988, 10489051)] 2021-10-25 09:33:30.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:30.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12776798, 12776868), (12776949, 12777076), (12777225, 12783088), (12783589, 12784701), (12783589, 12784461), (12784522, 12784808), (12784522, 12784701)] 2021-10-25 09:33:30.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035848: ['FBtr0076690'] 2021-10-25 09:33:30.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035848 has a single transcript. 2021-10-25 09:33:30.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24785587, 24785786), (24785914, 24785972), (24786902, 24786991), (24786902, 24787294)] 2021-10-25 09:33:30.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035849: ['FBtr0076724', 'FBtr0076725'] 2021-10-25 09:33:30.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032260: ['FBtr0080037'] 2021-10-25 09:33:30.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032260 has a single transcript. 2021-10-25 09:33:30.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000723: ['FBtr0082052', 'FBtr0082053', 'FBtr0082054', 'FBtr0082051', 'FBtr0333295', 'FBtr0333296'] 2021-10-25 09:33:30.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032261: ['FBtr0080091', 'FBtr0337004'] 2021-10-25 09:33:30.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260653: ['FBtr0074953', 'FBtr0333862'] 2021-10-25 09:33:30.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8184427, 8184483), (8185042, 8186178), (8185042, 8185566)] 2021-10-25 09:33:30.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039224: ['FBtr0084742'] 2021-10-25 09:33:30.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039224 has a single transcript. 2021-10-25 09:33:30.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039225: ['FBtr0084697', 'FBtr0339254'] 2021-10-25 09:33:30.370 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10507355, 10507418)] 2021-10-25 09:33:30.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.372 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19702498, 19705808), (19706058, 19706224), (19706397, 19707419)] 2021-10-25 09:33:30.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035850: ['FBtr0076691', 'FBtr0076692', 'FBtr0076693', 'FBtr0346547', 'FBtr0321319', 'FBtr0321320', 'FBtr0321321'] 2021-10-25 09:33:30.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24788263, 24792769), (24793253, 24793378), (24793549, 24794323), (24794444, 24794595), (24794642, 24796122), (24796795, 24796857)] 2021-10-25 09:33:30.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052649: ['FBtr0073697'] 2021-10-25 09:33:30.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052649 has a single transcript. 2021-10-25 09:33:30.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260655: ['FBtr0074966', 'FBtr0333896'] 2021-10-25 09:33:30.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032262: ['FBtr0080135'] 2021-10-25 09:33:30.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032262 has a single transcript. 2021-10-25 09:33:30.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052650: ['FBtr0073698'] 2021-10-25 09:33:30.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052650 has a single transcript. 2021-10-25 09:33:30.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032264: ['FBtr0080093', 'FBtr0304119', 'FBtr0331672'] 2021-10-25 09:33:30.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9368392, 9368455), (9368638, 9368698), (9368827, 9368896), (9368983, 9369054), (9369268, 9369335), (9369710, 9371014), (9369710, 9372376), (9369710, 9372755), (9372577, 9372755), (9372580, 9372755), (9372933, 9372989), (9373268, 9373330), (9373667, 9373778), (9373875, 9374644), (9373875, 9390885), (9391073, 9392740), (9392972, 9394240)] 2021-10-25 09:33:30.445 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052651: ['FBtr0073672'] 2021-10-25 09:33:30.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052651 has a single transcript. 2021-10-25 09:33:30.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052652: ['FBtr0347270'] 2021-10-25 09:33:30.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052652 has a single transcript. 2021-10-25 09:33:30.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039226: ['FBtr0331698', 'FBtr0331699', 'FBtr0345210'] 2021-10-25 09:33:30.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19614393, 19614523), (19614949, 19615009), (19615922, 19616016), (19616479, 19616533), (19616782, 19616839), (19617764, 19617823), (19617985, 19618279)] 2021-10-25 09:33:30.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052654: ['FBtr0113445', 'FBtr0113444', 'FBtr0340104', 'FBtr0340105', 'FBtr0340106', 'FBtr0310304'] 2021-10-25 09:33:30.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10527856, 10529561), (10529749, 10530077), (10530255, 10530313), (10530669, 10530855), (10530675, 10530855)] 2021-10-25 09:33:30.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24798581, 24799126), (24799307, 24799363)] 2021-10-25 09:33:30.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260657: ['FBtr0301095', 'FBtr0301096', 'FBtr0301097', 'FBtr0301098', 'FBtr0344807', 'FBtr0333583', 'FBtr0333584', 'FBtr0333585', 'FBtr0304988'] 2021-10-25 09:33:30.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8187193, 8187478), (8187218, 8187478), (8187402, 8187478), (8187576, 8187812), (8188580, 8189286), (8188580, 8189301), (8189445, 8189841), (8189969, 8190050), (8189969, 8190071)] 2021-10-25 09:33:30.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8189841, 8190714, 'FBtr0076691_exon_5') contains intron (8189969, 8190050) 2021-10-25 09:33:30.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8186994, 8187576, 'FBtr0076692_exon_1') contains intron (8187193, 8187478) 2021-10-25 09:33:30.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8189841, 8190714, 'FBtr0076692_exon_4') contains intron (8189969, 8190050) 2021-10-25 09:33:30.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8189841, 8191118, 'FBtr0076693_exon_5') contains intron (8189969, 8190050) 2021-10-25 09:33:30.554 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8189841, 8190714, 'FBtr0346547_exon_5') contains intron (8189969, 8190050) 2021-10-25 09:33:30.554 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8189841, 8190714, 'FBtr0321321_exon_5') contains intron (8189969, 8190050) 2021-10-25 09:33:30.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076691_exon_5', 'FBtr0076692_exon_1', 'FBtr0076692_exon_4', 'FBtr0076693_exon_5', 'FBtr0346547_exon_5', 'FBtr0321321_exon_5'] 2021-10-25 09:33:30.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032265: ['FBtr0080094'] 2021-10-25 09:33:30.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032265 has a single transcript. 2021-10-25 09:33:30.616 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12596234, 12597345), (12596737, 12597345), (12596969, 12597345), (12600441, 12601582), (12600441, 12603009), (12601897, 12603009), (12603466, 12603528), (12604259, 12604319), (12604584, 12604647), (12604797, 12604860), (12604797, 12604863), (12605388, 12607697), (12605388, 12605802), (12606153, 12607697), (12607879, 12607977), (12607879, 12607998), (12608528, 12608623), (12608865, 12608934), (12608865, 12608940)] 2021-10-25 09:33:30.616 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12605802, 12607707, 'FBtr0113444_exon_8') contains intron (12606153, 12607697) 2021-10-25 09:33:30.617 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12605802, 12607707, 'FBtr0340105_exon_9') contains intron (12606153, 12607697) 2021-10-25 09:33:30.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113444_exon_8', 'FBtr0340105_exon_9'] 2021-10-25 09:33:30.618 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032266: ['FBtr0080095'] 2021-10-25 09:33:30.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032266 has a single transcript. 2021-10-25 09:33:30.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039227: ['FBtr0084740'] 2021-10-25 09:33:30.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039227 has a single transcript. 2021-10-25 09:33:30.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032268: ['FBtr0080098'] 2021-10-25 09:33:30.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032268 has a single transcript. 2021-10-25 09:33:30.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039228: ['FBtr0084698'] 2021-10-25 09:33:30.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039228 has a single transcript. 2021-10-25 09:33:30.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032269: ['FBtr0080132', 'FBtr0304115'] 2021-10-25 09:33:30.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039229: ['FBtr0084700', 'FBtr0331696', 'FBtr0392911', 'FBtr0392912'] 2021-10-25 09:33:30.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10576692, 10576755), (10576695, 10576755)] 2021-10-25 09:33:30.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000808: ['FBtr0332308', 'FBtr0332309', 'FBtr0332310', 'FBtr0347416'] 2021-10-25 09:33:30.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24817736, 24817861), (24818350, 24818410), (24818438, 24818585), (24818700, 24818802), (24818849, 24821096), (24818849, 24819728), (24820767, 24821096), (24821246, 24821299), (24821725, 24821793)] 2021-10-25 09:33:30.723 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24818802, 24821246, 'FBtr0392911_exon_5') contains intron (24818849, 24821096) 2021-10-25 09:33:30.724 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24818802, 24820767, 'FBtr0392912_exon_5') contains intron (24818849, 24819728) 2021-10-25 09:33:30.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0392911_exon_5', 'FBtr0392912_exon_5'] 2021-10-25 09:33:30.724 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032271: ['FBtr0080131', 'FBtr0331373'] 2021-10-25 09:33:30.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4556186, 4563796), (4558052, 4563796), (4563896, 4564537), (4563896, 4578759), (4563896, 4568624), (4563896, 4577916), (4564549, 4578759), (4564549, 4568624), (4564549, 4577916), (4568948, 4578759), (4568948, 4577916), (4575758, 4577916), (4575758, 4578759), (4577952, 4578759), (4578869, 4579446), (4579519, 4580076), (4580159, 4586579), (4586783, 4588068), (4588124, 4589786), (4589967, 4590031)] 2021-10-25 09:33:30.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10630074, 10630132), (10630804, 10630869), (10631052, 10638225)] 2021-10-25 09:33:30.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11985359, 11985419), (11986296, 11986418), (11986970, 11987049), (11986970, 11987031), (11987206, 11987270), (11987421, 11987473), (11987430, 11987473)] 2021-10-25 09:33:30.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026630: ['FBtr0075019', 'FBtr0075020', 'FBtr0075021'] 2021-10-25 09:33:30.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035851: ['FBtr0076694'] 2021-10-25 09:33:30.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035851 has a single transcript. 2021-10-25 09:33:30.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035852: ['FBtr0076723'] 2021-10-25 09:33:30.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035852 has a single transcript. 2021-10-25 09:33:30.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035853: ['FBtr0076722', 'FBtr0332138', 'FBtr0332139'] 2021-10-25 09:33:30.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052655: ['FBtr0073633'] 2021-10-25 09:33:30.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052655 has a single transcript. 2021-10-25 09:33:30.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032276: ['FBtr0080103'] 2021-10-25 09:33:30.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032276 has a single transcript. 2021-10-25 09:33:30.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032280: ['FBtr0080106', 'FBtr0345612'] 2021-10-25 09:33:30.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052656: ['FBtr0342741'] 2021-10-25 09:33:30.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052656 has a single transcript. 2021-10-25 09:33:30.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052657: ['FBtr0073625'] 2021-10-25 09:33:30.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052657 has a single transcript. 2021-10-25 09:33:30.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19258364, 19258537), (19259568, 19260114), (19260230, 19260645), (19260230, 19260548), (19260230, 19260532)] 2021-10-25 09:33:30.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052660: ['FBtr0343098', 'FBtr0331750'] 2021-10-25 09:33:30.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039232: ['FBtr0084701', 'FBtr0084702', 'FBtr0308072'] 2021-10-25 09:33:30.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:30.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8196883, 8197141), (8197443, 8197521), (8197702, 8197778), (8197705, 8197778)] 2021-10-25 09:33:30.892 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11920186, 11920243), (11920337, 11920409)] 2021-10-25 09:33:30.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000810: ['FBtr0070396'] 2021-10-25 09:33:30.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000810 has a single transcript. 2021-10-25 09:33:30.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000826: ['FBtr0070234'] 2021-10-25 09:33:30.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000826 has a single transcript. 2021-10-25 09:33:30.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032281: ['FBtr0080107', 'FBtr0336847', 'FBtr0336848'] 2021-10-25 09:33:30.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000927: ['FBtr0070485'] 2021-10-25 09:33:30.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000927 has a single transcript. 2021-10-25 09:33:30.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24834209, 24834312), (24834381, 24838050), (24835694, 24838050), (24837217, 24838050), (24838197, 24839312), (24839489, 24839611)] 2021-10-25 09:33:30.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:30.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:30.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000928: ['FBtr0070484'] 2021-10-25 09:33:30.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026634: ['FBtr0083114'] 2021-10-25 09:33:30.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0000928 has a single transcript. 2021-10-25 09:33:30.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026634 has a single transcript. 2021-10-25 09:33:30.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026666: ['FBtr0074084', 'FBtr0332613'] 2021-10-25 09:33:30.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000964: ['FBtr0329891', 'FBtr0301669'] 2021-10-25 09:33:30.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052666: ['FBtr0340295', 'FBtr0301020', 'FBtr0301021'] 2021-10-25 09:33:30.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035854: ['FBtr0076695', 'FBtr0332137'] 2021-10-25 09:33:31.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15734452, 15734552), (15734606, 15735098), (15735174, 15735246), (15735174, 15735243), (15735321, 15735388)] 2021-10-25 09:33:31.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.026 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329891': ['FBtr0301669']} 2021-10-25 09:33:31.026 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0301669']] 2021-10-25 09:33:31.033 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8198483, 8198541), (8198483, 8198552)] 2021-10-25 09:33:31.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0000996: ['FBtr0087387', 'FBtr0339999'] 2021-10-25 09:33:31.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11493385, 11493707), (11493999, 11550476), (11550689, 11550761), (11550937, 11551028), (11551347, 11551771)] 2021-10-25 09:33:31.043 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11493134, 11493999, 'FBtr0301021_exon_1') contains intron (11493385, 11493707) 2021-10-25 09:33:31.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301021_exon_1'] 2021-10-25 09:33:31.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039233: ['FBtr0084704'] 2021-10-25 09:33:31.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039233 has a single transcript. 2021-10-25 09:33:31.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039234: ['FBtr0084705', 'FBtr0301865', 'FBtr0306087', 'FBtr0334570'] 2021-10-25 09:33:31.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15378421, 15379556), (15380221, 15380318)] 2021-10-25 09:33:31.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026679: ['FBtr0071234'] 2021-10-25 09:33:31.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026679 has a single transcript. 2021-10-25 09:33:31.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035855: ['FBtr0076721'] 2021-10-25 09:33:31.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035855 has a single transcript. 2021-10-25 09:33:31.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026702: ['FBtr0070782'] 2021-10-25 09:33:31.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026702 has a single transcript. 2021-10-25 09:33:31.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035856: ['FBtr0076697'] 2021-10-25 09:33:31.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035856 has a single transcript. 2021-10-25 09:33:31.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266697: ['FBtr0345153'] 2021-10-25 09:33:31.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266697 has a single transcript. 2021-10-25 09:33:31.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026713: ['FBtr0073900', 'FBtr0073901'] 2021-10-25 09:33:31.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035857: ['FBtr0076698'] 2021-10-25 09:33:31.103 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035857 has a single transcript. 2021-10-25 09:33:31.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032282: ['FBtr0080130', 'FBtr0336851'] 2021-10-25 09:33:31.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266698: ['FBtr0345154'] 2021-10-25 09:33:31.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266698 has a single transcript. 2021-10-25 09:33:31.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266699: ['FBtr0345123'] 2021-10-25 09:33:31.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266699 has a single transcript. 2021-10-25 09:33:31.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035858: ['FBtr0076719', 'FBtr0333624'] 2021-10-25 09:33:31.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266700: ['FBtr0345124'] 2021-10-25 09:33:31.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266700 has a single transcript. 2021-10-25 09:33:31.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266701: ['FBtr0345125'] 2021-10-25 09:33:31.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266701 has a single transcript. 2021-10-25 09:33:31.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260658: ['FBtr0301099', 'FBtr0301100', 'FBtr0332388', 'FBtr0332389'] 2021-10-25 09:33:31.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001075: ['FBtr0077478'] 2021-10-25 09:33:31.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001075 has a single transcript. 2021-10-25 09:33:31.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14203284, 14203440), (14203634, 14222906), (14212597, 14222906), (14223961, 14224024)] 2021-10-25 09:33:31.145 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266702: ['FBtr0345151', 'FBtr0345152'] 2021-10-25 09:33:31.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001077: ['FBtr0081625'] 2021-10-25 09:33:31.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001077 has a single transcript. 2021-10-25 09:33:31.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052667: ['FBtr0073474'] 2021-10-25 09:33:31.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052667 has a single transcript. 2021-10-25 09:33:31.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052668: ['FBtr0073469'] 2021-10-25 09:33:31.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052668 has a single transcript. 2021-10-25 09:33:31.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001078: ['FBtr0075086', 'FBtr0075087', 'FBtr0304627', 'FBtr0347045'] 2021-10-25 09:33:31.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8218843, 8218908)] 2021-10-25 09:33:31.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.167 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24851712, 24851837), (24851933, 24851985), (24852675, 24852737), (24853539, 24853602), (24853814, 24853875), (24854086, 24854224), (24854086, 24854361), (24854302, 24854361)] 2021-10-25 09:33:31.168 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24854224, 24854869, 'FBtr0301865_exon_7') contains intron (24854302, 24854361) 2021-10-25 09:33:31.169 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24853875, 24854569, 'FBtr0306087_exon_6') contains intron (24854086, 24854224) 2021-10-25 09:33:31.169 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301865_exon_7', 'FBtr0306087_exon_6'] 2021-10-25 09:33:31.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052669: ['FBtr0073412'] 2021-10-25 09:33:31.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052669 has a single transcript. 2021-10-25 09:33:31.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052670: ['FBtr0073401'] 2021-10-25 09:33:31.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052670 has a single transcript. 2021-10-25 09:33:31.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5835911, 5835990), (5835938, 5835990)] 2021-10-25 09:33:31.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052671: ['FBtr0073402'] 2021-10-25 09:33:31.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052671 has a single transcript. 2021-10-25 09:33:31.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032283: ['FBtr0080129', 'FBtr0336850'] 2021-10-25 09:33:31.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026718: ['FBtr0079703', 'FBtr0079704', 'FBtr0340242', 'FBtr0302160'] 2021-10-25 09:33:31.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052672: ['FBtr0071498', 'FBtr0346375', 'FBtr0346376'] 2021-10-25 09:33:31.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035859: ['FBtr0076700'] 2021-10-25 09:33:31.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035859 has a single transcript. 2021-10-25 09:33:31.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035861: ['FBtr0076718'] 2021-10-25 09:33:31.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035861 has a single transcript. 2021-10-25 09:33:31.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3896681, 3896841), (3897034, 3897555), (3897647, 3901107), (3901262, 3901785), (3901860, 3901930), (3902052, 3904028), (3904596, 3905736), (3905897, 3906204), (3905900, 3906204), (3907097, 3910438), (3910768, 3910825), (3911237, 3911303), (3911240, 3911303), (3911516, 3911646), (3911879, 3929566)] 2021-10-25 09:33:31.242 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3910438, 3911240, 'FBtr0301099_exon_4') contains intron (3910768, 3910825) 2021-10-25 09:33:31.243 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3910438, 3911240, 'FBtr0301100_exon_4') contains intron (3910768, 3910825) 2021-10-25 09:33:31.243 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3910438, 3911237, 'FBtr0332388_exon_4') contains intron (3910768, 3910825) 2021-10-25 09:33:31.244 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301099_exon_4', 'FBtr0301100_exon_4', 'FBtr0332388_exon_4'] 2021-10-25 09:33:31.244 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035865: ['FBtr0076716', 'FBtr0332135'] 2021-10-25 09:33:31.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266703: ['FBtr0345155'] 2021-10-25 09:33:31.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266703 has a single transcript. 2021-10-25 09:33:31.256 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18752895, 18753017), (18753118, 18753184), (18753443, 18754313), (18754512, 18754576), (18754633, 18754983), (18754633, 18755133), (18755504, 18755655), (18755873, 18763328), (18763862, 18797536), (18798855, 18800107)] 2021-10-25 09:33:31.257 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.257 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266705: ['FBtr0345150'] 2021-10-25 09:33:31.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266705 has a single transcript. 2021-10-25 09:33:31.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266706: ['FBtr0345157'] 2021-10-25 09:33:31.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266706 has a single transcript. 2021-10-25 09:33:31.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10765535, 10765604), (10765802, 10766329), (10765802, 10767152), (10765802, 10767980)] 2021-10-25 09:33:31.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266707: ['FBtr0345172', 'FBtr0346738'] 2021-10-25 09:33:31.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8290857, 8290913), (8291325, 8291393), (8291766, 8295022), (8291766, 8295051)] 2021-10-25 09:33:31.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032284: ['FBtr0080128'] 2021-10-25 09:33:31.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032284 has a single transcript. 2021-10-25 09:33:31.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8450728, 8450793), (8451004, 8463626), (8451004, 8451453), (8451901, 8463626)] 2021-10-25 09:33:31.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032285: ['FBtr0080127'] 2021-10-25 09:33:31.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032285 has a single transcript. 2021-10-25 09:33:31.318 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032286: ['FBtr0080125', 'FBtr0345617'] 2021-10-25 09:33:31.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039235: ['FBtr0084732', 'FBtr0308616'] 2021-10-25 09:33:31.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035866: ['FBtr0076715'] 2021-10-25 09:33:31.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035866 has a single transcript. 2021-10-25 09:33:31.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035867: ['FBtr0076706'] 2021-10-25 09:33:31.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035867 has a single transcript. 2021-10-25 09:33:31.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24856567, 24856616), (24856696, 24856748), (24856899, 24856954), (24857311, 24857371), (24857322, 24857371)] 2021-10-25 09:33:31.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035868: ['FBtr0076714'] 2021-10-25 09:33:31.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035868 has a single transcript. 2021-10-25 09:33:31.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052673: ['FBtr0071505'] 2021-10-25 09:33:31.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052673 has a single transcript. 2021-10-25 09:33:31.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266708: ['FBtr0087320'] 2021-10-25 09:33:31.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266708 has a single transcript. 2021-10-25 09:33:31.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035870: ['FBtr0300280'] 2021-10-25 09:33:31.381 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035870 has a single transcript. 2021-10-25 09:33:31.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266709: ['FBtr0075894'] 2021-10-25 09:33:31.384 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266709 has a single transcript. 2021-10-25 09:33:31.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052675: ['FBtr0071499', 'FBtr0071500', 'FBtr0071501', 'FBtr0300569', 'FBtr0346377', 'FBtr0334457'] 2021-10-25 09:33:31.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035871: ['FBtr0076711', 'FBtr0076712'] 2021-10-25 09:33:31.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266710: ['FBtr0073941'] 2021-10-25 09:33:31.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266710 has a single transcript. 2021-10-25 09:33:31.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266711: ['FBtr0086540', 'FBtr0086541'] 2021-10-25 09:33:31.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001079: ['FBtr0074602'] 2021-10-25 09:33:31.409 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001079 has a single transcript. 2021-10-25 09:33:31.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260659: ['FBtr0301101', 'FBtr0301102', 'FBtr0301103', 'FBtr0301104', 'FBtr0302324', 'FBtr0302325'] 2021-10-25 09:33:31.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032287: ['FBtr0080108'] 2021-10-25 09:33:31.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032287 has a single transcript. 2021-10-25 09:33:31.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001083: ['FBtr0073580', 'FBtr0112806', 'FBtr0342733'] 2021-10-25 09:33:31.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032289: ['FBtr0273319', 'FBtr0303568'] 2021-10-25 09:33:31.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039237: ['FBtr0084730'] 2021-10-25 09:33:31.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039237 has a single transcript. 2021-10-25 09:33:31.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026721: ['FBtr0086975'] 2021-10-25 09:33:31.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026721 has a single transcript. 2021-10-25 09:33:31.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8307380, 8307592), (8307380, 8307793), (8307732, 8307793), (8307964, 8308091), (8308545, 8308695)] 2021-10-25 09:33:31.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039238: ['FBtr0084707'] 2021-10-25 09:33:31.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039238 has a single transcript. 2021-10-25 09:33:31.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19445379, 19445927), (19446139, 19446217)] 2021-10-25 09:33:31.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19445927, 19446286, 'FBtr0086541_exon_1') contains intron (19446139, 19446217) 2021-10-25 09:33:31.443 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086541_exon_1'] 2021-10-25 09:33:31.443 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026722: ['FBtr0088850'] 2021-10-25 09:33:31.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026722 has a single transcript. 2021-10-25 09:33:31.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039239: ['FBtr0084729'] 2021-10-25 09:33:31.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039239 has a single transcript. 2021-10-25 09:33:31.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026737: ['FBtr0083113', 'FBtr0112926'] 2021-10-25 09:33:31.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039240: ['FBtr0334574', 'FBtr0334575', 'FBtr0334576', 'FBtr0334577'] 2021-10-25 09:33:31.467 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10724346, 10724416), (10724546, 10727604), (10726144, 10726301), (10726443, 10727604), (10727753, 10727833), (10728268, 10728351), (10728556, 10728612)] 2021-10-25 09:33:31.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15363097, 15363151), (15363315, 15363376)] 2021-10-25 09:33:31.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035872: ['FBtr0076710', 'FBtr0304628'] 2021-10-25 09:33:31.494 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15362795, 15363315, 'FBtr0083113_exon_2') contains intron (15363097, 15363151) 2021-10-25 09:33:31.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083113_exon_2'] 2021-10-25 09:33:31.495 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.495 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11993630, 11993791), (11994316, 11994376), (11994730, 11994814), (11994927, 11994993), (11995120, 11995184), (11995364, 11995462), (11995871, 11995935), (11996231, 11996391), (11996568, 11996640), (11996790, 11996855), (11997008, 11997087), (11997562, 11998237), (11998500, 12001927), (12002519, 12003746)] 2021-10-25 09:33:31.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266717: ['FBtr0082239', 'FBtr0331681', 'FBtr0331682', 'FBtr0331683', 'FBtr0331684'] 2021-10-25 09:33:31.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10760992, 10761202), (10761509, 10761577), (10761859, 10761914), (10762202, 10764169), (10762434, 10763150), (10762434, 10764169), (10762434, 10764084)] 2021-10-25 09:33:31.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032290: ['FBtr0080110'] 2021-10-25 09:33:31.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032290 has a single transcript. 2021-10-25 09:33:31.533 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8311226, 8311646), (8311715, 8311773), (8312073, 8312283), (8312750, 8313956), (8312750, 8313010), (8313151, 8313956), (8314676, 8315071)] 2021-10-25 09:33:31.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.534 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15196637, 15198864), (15197006, 15198864), (15197297, 15198864), (15199150, 15199213), (15199504, 15199569), (15199710, 15202023), (15199710, 15200685), (15201225, 15202023), (15202203, 15202265)] 2021-10-25 09:33:31.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032291: ['FBtr0080111'] 2021-10-25 09:33:31.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032291 has a single transcript. 2021-10-25 09:33:31.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24872153, 24872218), (24872411, 24872653), (24872876, 24872937), (24873249, 24873358), (24873962, 24874102), (24874659, 24874713), (24874933, 24874992), (24875525, 24875705), (24875999, 24876246)] 2021-10-25 09:33:31.547 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24874992, 24876654, 'FBtr0334574_exon_1') contains intron (24875525, 24875705) 2021-10-25 09:33:31.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032292: ['FBtr0080122'] 2021-10-25 09:33:31.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032292 has a single transcript. 2021-10-25 09:33:31.547 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24875705, 24876654, 'FBtr0334576_exon_1') contains intron (24875999, 24876246) 2021-10-25 09:33:31.548 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24874992, 24875999, 'FBtr0334577_exon_2') contains intron (24875525, 24875705) 2021-10-25 09:33:31.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334574_exon_1', 'FBtr0334576_exon_1', 'FBtr0334577_exon_2'] 2021-10-25 09:33:31.548 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032293: ['FBtr0080112'] 2021-10-25 09:33:31.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032293 has a single transcript. 2021-10-25 09:33:31.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026738: ['FBtr0075605'] 2021-10-25 09:33:31.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026738 has a single transcript. 2021-10-25 09:33:31.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032294: ['FBtr0080120'] 2021-10-25 09:33:31.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032294 has a single transcript. 2021-10-25 09:33:31.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026741: ['FBtr0087852'] 2021-10-25 09:33:31.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026741 has a single transcript. 2021-10-25 09:33:31.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026749: ['FBtr0073789', 'FBtr0100168'] 2021-10-25 09:33:31.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032295: ['FBtr0080113'] 2021-10-25 09:33:31.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032295 has a single transcript. 2021-10-25 09:33:31.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032296: ['FBtr0080119'] 2021-10-25 09:33:31.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032296 has a single transcript. 2021-10-25 09:33:31.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035873: ['FBtr0076708'] 2021-10-25 09:33:31.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035873 has a single transcript. 2021-10-25 09:33:31.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032297: ['FBtr0080117', 'FBtr0080118', 'FBtr0340246'] 2021-10-25 09:33:31.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035875: ['FBtr0076601'] 2021-10-25 09:33:31.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035875 has a single transcript. 2021-10-25 09:33:31.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035876: ['FBtr0076602'] 2021-10-25 09:33:31.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035876 has a single transcript. 2021-10-25 09:33:31.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001084: ['FBtr0079712', 'FBtr0331992'] 2021-10-25 09:33:31.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035877: ['FBtr0076604'] 2021-10-25 09:33:31.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035877 has a single transcript. 2021-10-25 09:33:31.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13386431, 13386588), (13386748, 13386814), (13387040, 13387185)] 2021-10-25 09:33:31.619 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13385913, 13386748, 'FBtr0100168_exon_3') contains intron (13386431, 13386588) 2021-10-25 09:33:31.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100168_exon_3'] 2021-10-25 09:33:31.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035878: ['FBtr0076677', 'FBtr0345596'] 2021-10-25 09:33:31.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10313138, 10313209), (10313638, 10313712), (10314181, 10314238), (10315070, 10315124), (10315739, 10315795), (10316041, 10316201), (10316074, 10316201), (10317548, 10317607), (10318071, 10318138), (10318674, 10318731), (10318916, 10318973), (10319204, 10319261), (10319379, 10319436), (10319660, 10319719), (10319978, 10320045), (10320830, 10321464), (10320830, 10321154), (10321226, 10321464), (10321582, 10321661), (10322147, 10322207), (10322380, 10322446), (10322383, 10322446), (10322715, 10322770), (10324196, 10324285), (10324409, 10324465), (10324698, 10324757), (10325179, 10325241), (10325656, 10326260), (10325656, 10325731), (10326031, 10326260), (10326482, 10326542), (10326763, 10326828), (10327663, 10327728), (10328478, 10328570), (10329633, 10329690), (10330001, 10330967)] 2021-10-25 09:33:31.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8401771, 8401830), (8402945, 8403003)] 2021-10-25 09:33:31.654 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.654 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10745571, 10745634), (10745709, 10745781), (10746078, 10753316), (10746078, 10755903), (10754014, 10755903)] 2021-10-25 09:33:31.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026751: ['FBtr0070763'] 2021-10-25 09:33:31.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026751 has a single transcript. 2021-10-25 09:33:31.677 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:31.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026754: ['FBtr0087076'] 2021-10-25 09:33:31.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026754 has a single transcript. 2021-10-25 09:33:31.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026755: ['FBtr0079242'] 2021-10-25 09:33:31.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026755 has a single transcript. 2021-10-25 09:33:31.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026756: ['FBtr0081372'] 2021-10-25 09:33:31.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026756 has a single transcript. 2021-10-25 09:33:31.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039241: ['FBtr0084710', 'FBtr0303476'] 2021-10-25 09:33:31.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026760: ['FBtr0080502', 'FBtr0346423'] 2021-10-25 09:33:31.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001085: ['FBtr0075743', 'FBtr0330102'] 2021-10-25 09:33:31.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035879: ['FBtr0076605', 'FBtr0113153'] 2021-10-25 09:33:31.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24877134, 24879056), (24879119, 24879176), (24880249, 24880312), (24880746, 24880805), (24880932, 24880993)] 2021-10-25 09:33:31.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13436794, 13437922)] 2021-10-25 09:33:31.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032298: ['FBtr0080191', 'FBtr0333491'] 2021-10-25 09:33:31.760 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14275726, 14304896), (14305016, 14311860), (14312055, 14317111), (14317337, 14366747)] 2021-10-25 09:33:31.761 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052676: ['FBtr0071503', 'FBtr0333017'] 2021-10-25 09:33:31.770 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075743': ['FBtr0330102']} 2021-10-25 09:33:31.770 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330102']] 2021-10-25 09:33:31.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8347476, 8347774), (8348053, 8348255), (8348439, 8348501), (8348689, 8348748), (8349845, 8349899), (8350088, 8350147), (8350867, 8350926), (8351379, 8351766)] 2021-10-25 09:33:31.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001086: ['FBtr0080833'] 2021-10-25 09:33:31.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001086 has a single transcript. 2021-10-25 09:33:31.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001087: ['FBtr0073842', 'FBtr0331709', 'FBtr0331710'] 2021-10-25 09:33:31.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039244: ['FBtr0084712'] 2021-10-25 09:33:31.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039244 has a single transcript. 2021-10-25 09:33:31.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260660: ['FBtr0309957', 'FBtr0301105', 'FBtr0301106', 'FBtr0301107', 'FBtr0301108', 'FBtr0301109', 'FBtr0301110', 'FBtr0301111', 'FBtr0301113', 'FBtr0301114', 'FBtr0301958', 'FBtr0308094', 'FBtr0306638', 'FBtr0339903', 'FBtr0339904', 'FBtr0339905'] 2021-10-25 09:33:31.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039246: ['FBtr0084713'] 2021-10-25 09:33:31.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039246 has a single transcript. 2021-10-25 09:33:31.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026761: ['FBtr0086149', 'FBtr0336666'] 2021-10-25 09:33:31.803 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10768576, 10768643), (10768890, 10768947), (10768890, 10768953), (10769614, 10769674)] 2021-10-25 09:33:31.804 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.805 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10715139, 10715199), (10717392, 10726918), (10727006, 10743802)] 2021-10-25 09:33:31.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039249: ['FBtr0084715', 'FBtr0306089', 'FBtr0337009', 'FBtr0337010'] 2021-10-25 09:33:31.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035880: ['FBtr0076676', 'FBtr0076675', 'FBtr0076674', 'FBtr0113154'] 2021-10-25 09:33:31.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6633948, 6634010), (6635778, 6635854)] 2021-10-25 09:33:31.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266719: ['FBtr0303025', 'FBtr0303026', 'FBtr0334505'] 2021-10-25 09:33:31.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13728614, 13728684), (13728817, 13728879), (13728817, 13728882), (13729023, 13729083), (13729693, 13729759), (13730436, 13730495), (13730644, 13732625), (13730644, 13731548), (13731622, 13733084), (13732699, 13733084), (13733224, 13733311), (13733441, 13733495), (13733636, 13733706), (13733835, 13734642), (13734738, 13735941), (13734738, 13735530)] 2021-10-25 09:33:31.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052677: ['FBtr0071493', 'FBtr0343041', 'FBtr0343042'] 2021-10-25 09:33:31.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032299: ['FBtr0080136', 'FBtr0290229'] 2021-10-25 09:33:31.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24918264, 24918621), (24918755, 24918816), (24919583, 24919923), (24920047, 24920358), (24920047, 24920316), (24920633, 24920731), (24921540, 24921601), (24921838, 24921897), (24922029, 24922084)] 2021-10-25 09:33:31.900 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24919923, 24920633, 'FBtr0306089_exon_4') contains intron (24920047, 24920358) 2021-10-25 09:33:31.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306089_exon_4'] 2021-10-25 09:33:31.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026777: ['FBtr0089121', 'FBtr0089122', 'FBtr0333679'] 2021-10-25 09:33:31.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10770896, 10770957)] 2021-10-25 09:33:31.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25056498, 25057624), (25057182, 25057624), (25057904, 25060208), (25059557, 25060208), (25060549, 25060612), (25060660, 25060959), (25061119, 25061183), (25062004, 25062070), (25062285, 25062342), (25062620, 25062677), (25062768, 25062832), (25062906, 25062965), (25063331, 25063389), (25063650, 25063707), (25063877, 25063934), (25064116, 25064177)] 2021-10-25 09:33:31.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8353412, 8353478), (8353426, 8353478), (8354183, 8354241), (8354610, 8355143), (8355548, 8355611), (8355942, 8356004)] 2021-10-25 09:33:31.922 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8352374, 8354183, 'FBtr0076676_exon_5') contains intron (8353412, 8353478) 2021-10-25 09:33:31.922 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8355143, 8355942, 'FBtr0113154_exon_2') contains intron (8355548, 8355611) 2021-10-25 09:33:31.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076676_exon_5', 'FBtr0113154_exon_2'] 2021-10-25 09:33:31.923 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10627889, 10631388), (10629415, 10631388), (10631808, 10677708), (10677755, 10699256), (10701121, 10702453), (10701121, 10701803), (10702001, 10702453), (10702833, 10702898), (10703462, 10703563), (10703462, 10703572), (10704095, 10704153), (10704675, 10704756), (10705998, 10706951), (10706013, 10706951), (10707082, 10707816), (10707082, 10708066), (10707822, 10708066), (10708834, 10708895), (10709036, 10709087)] 2021-10-25 09:33:31.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032303: ['FBtr0080139'] 2021-10-25 09:33:31.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032303 has a single transcript. 2021-10-25 09:33:31.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(308289, 308430), (308289, 308412), (309079, 309538), (309633, 309693), (310017, 310078)] 2021-10-25 09:33:31.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:31.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:31.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032304: ['FBtr0080140'] 2021-10-25 09:33:31.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032304 has a single transcript. 2021-10-25 09:33:31.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032305: ['FBtr0080187', 'FBtr0301710'] 2021-10-25 09:33:32.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266720: ['FBtr0082163'] 2021-10-25 09:33:32.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266720 has a single transcript. 2021-10-25 09:33:32.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266721: ['FBtr0082195'] 2021-10-25 09:33:32.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266721 has a single transcript. 2021-10-25 09:33:32.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10839469, 10839532), (10839740, 10839800), (10840005, 10840060), (10840796, 10840866), (10842273, 10842384), (10842273, 10842380)] 2021-10-25 09:33:32.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039250: ['FBtr0084716'] 2021-10-25 09:33:32.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039250 has a single transcript. 2021-10-25 09:33:32.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266722: ['FBtr0083116'] 2021-10-25 09:33:32.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266722 has a single transcript. 2021-10-25 09:33:32.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052679: ['FBtr0071469'] 2021-10-25 09:33:32.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052679 has a single transcript. 2021-10-25 09:33:32.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039251: ['FBtr0084718', 'FBtr0337011'] 2021-10-25 09:33:32.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266723: ['FBtr0087470'] 2021-10-25 09:33:32.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266723 has a single transcript. 2021-10-25 09:33:32.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052681: ['FBtr0071466'] 2021-10-25 09:33:32.049 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052681 has a single transcript. 2021-10-25 09:33:32.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266724: ['FBtr0075491'] 2021-10-25 09:33:32.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266724 has a single transcript. 2021-10-25 09:33:32.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266725: ['FBtr0345198'] 2021-10-25 09:33:32.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026778: ['FBtr0077747'] 2021-10-25 09:33:32.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026778 has a single transcript. 2021-10-25 09:33:32.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266725 has a single transcript. 2021-10-25 09:33:32.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035886: ['FBtr0076608'] 2021-10-25 09:33:32.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035886 has a single transcript. 2021-10-25 09:33:32.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052683: ['FBtr0071463', 'FBtr0343034'] 2021-10-25 09:33:32.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026787: ['FBtr0301452'] 2021-10-25 09:33:32.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026787 has a single transcript. 2021-10-25 09:33:32.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035887: ['FBtr0076666'] 2021-10-25 09:33:32.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266726: ['FBtr0345199'] 2021-10-25 09:33:32.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035887 has a single transcript. 2021-10-25 09:33:32.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266726 has a single transcript. 2021-10-25 09:33:32.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266727: ['FBtr0345200'] 2021-10-25 09:33:32.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266727 has a single transcript. 2021-10-25 09:33:32.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026869: ['FBtr0089106', 'FBtr0333706', 'FBtr0345197'] 2021-10-25 09:33:32.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:32.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035888: ['FBtr0307378', 'FBtr0307376', 'FBtr0307377', 'FBtr0332983'] 2021-10-25 09:33:32.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266728: ['FBtr0345201'] 2021-10-25 09:33:32.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266728 has a single transcript. 2021-10-25 09:33:32.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032311: ['FBtr0080144'] 2021-10-25 09:33:32.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032311 has a single transcript. 2021-10-25 09:33:32.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001089: ['FBtr0079230', 'FBtr0332603'] 2021-10-25 09:33:32.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266729: ['FBtr0345225'] 2021-10-25 09:33:32.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266729 has a single transcript. 2021-10-25 09:33:32.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032312: ['FBtr0080178', 'FBtr0305259', 'FBtr0340560'] 2021-10-25 09:33:32.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10413831, 10420830), (10421067, 10421132), (10421530, 10424806), (10424954, 10427097), (10427218, 10427319), (10427517, 10452156), (10452492, 10454635)] 2021-10-25 09:33:32.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266730: ['FBtr0345304'] 2021-10-25 09:33:32.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266730 has a single transcript. 2021-10-25 09:33:32.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266731: ['FBtr0345221'] 2021-10-25 09:33:32.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266731 has a single transcript. 2021-10-25 09:33:32.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6998978, 6999634), (6998978, 6999639), (6999003, 6999634), (6999003, 6999639), (6999835, 7012170), (7012289, 7012738), (7012898, 7035758), (7013277, 7033868), (7015276, 7019625), (7019898, 7034502), (7019898, 7034971), (7019898, 7050564), (7033964, 7034502), (7033964, 7034971), (7034538, 7034634), (7034703, 7035213), (7034703, 7034971), (7035038, 7035169), (7035315, 7035743), (7035881, 7038004), (7038151, 7040545), (7038151, 7041017), (7040575, 7041017), (7041131, 7043465), (7043720, 7044925), (7045003, 7045108), (7045355, 7046333), (7045355, 7045533), (7045611, 7046333), (7046488, 7046585), (7046678, 7048841), (7048702, 7048841), (7048964, 7049549), (7048964, 7050564), (7048964, 7050172), (7049576, 7050564), (7049576, 7050172), (7050187, 7050564), (7050695, 7051241), (7051421, 7051485), (7051722, 7051976)] 2021-10-25 09:33:32.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266732: ['FBtr0345305'] 2021-10-25 09:33:32.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266732 has a single transcript. 2021-10-25 09:33:32.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6004854, 6005005), (6005153, 6005212), (6005552, 6005685), (6005836, 6005903), (6006061, 6006566), (6006067, 6006566)] 2021-10-25 09:33:32.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266733: ['FBtr0345234'] 2021-10-25 09:33:32.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266733 has a single transcript. 2021-10-25 09:33:32.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039252: ['FBtr0084748'] 2021-10-25 09:33:32.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039252 has a single transcript. 2021-10-25 09:33:32.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(548143, 549258), (549621, 549713), (549873, 550753), (551380, 551990), (553741, 557442)] 2021-10-25 09:33:32.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266734: ['FBtr0345232', 'FBtr0345233'] 2021-10-25 09:33:32.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039254: ['FBtr0084749', 'FBtr0084750', 'FBtr0337012'] 2021-10-25 09:33:32.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10888217, 10888275), (10888822, 10888896)] 2021-10-25 09:33:32.156 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10888268, 10888927, 'FBtr0080178_exon_1') contains intron (10888822, 10888896) 2021-10-25 09:33:32.156 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10888275, 10888927, 'FBtr0305259_exon_1') contains intron (10888822, 10888896) 2021-10-25 09:33:32.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080178_exon_1', 'FBtr0305259_exon_1'] 2021-10-25 09:33:32.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052685: ['FBtr0071489', 'FBtr0308582', 'FBtr0308583', 'FBtr0308584'] 2021-10-25 09:33:32.180 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8396185, 8398986), (8398364, 8398986), (8399046, 8399658), (8399943, 8400081), (8399943, 8400126), (8400689, 8400748)] 2021-10-25 09:33:32.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.196 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:32.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001090: ['FBtr0074656', 'FBtr0074657', 'FBtr0074658', 'FBtr0074659'] 2021-10-25 09:33:32.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24945453, 24945525), (24945932, 24945983), (24946085, 24946143), (24946295, 24946475), (24946295, 24946883), (24947154, 24947262)] 2021-10-25 09:33:32.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266735: ['FBtr0345235'] 2021-10-25 09:33:32.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266735 has a single transcript. 2021-10-25 09:33:32.250 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10072388, 10072569), (10072685, 10072748), (10072800, 10073300), (10073411, 10073876), (10073411, 10078485), (10074065, 10074137), (10074326, 10074393), (10074895, 10074975), (10075070, 10075143), (10075073, 10075143), (10075627, 10078485), (10077368, 10078485), (10081871, 10081932)] 2021-10-25 09:33:32.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.251 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032313: ['FBtr0080177', 'FBtr0340558'] 2021-10-25 09:33:32.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026872: ['FBtr0070253', 'FBtr0339576', 'FBtr0339577', 'FBtr0300352', 'FBtr0345508'] 2021-10-25 09:33:32.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266736: ['FBtr0345236'] 2021-10-25 09:33:32.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266736 has a single transcript. 2021-10-25 09:33:32.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266737: ['FBtr0345237'] 2021-10-25 09:33:32.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266737 has a single transcript. 2021-10-25 09:33:32.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266738: ['FBtr0345239'] 2021-10-25 09:33:32.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266738 has a single transcript. 2021-10-25 09:33:32.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266739: ['FBtr0345240'] 2021-10-25 09:33:32.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266739 has a single transcript. 2021-10-25 09:33:32.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18796294, 18796502), (18796294, 18797330), (18797469, 18797654)] 2021-10-25 09:33:32.289 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18797330, 18797687, 'FBtr0074656_exon_1') contains intron (18797469, 18797654) 2021-10-25 09:33:32.289 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18794519, 18796614, 'FBtr0074658_exon_1') contains intron (18796294, 18796502) 2021-10-25 09:33:32.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074656_exon_1', 'FBtr0074658_exon_1'] 2021-10-25 09:33:32.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10901204, 10901260)] 2021-10-25 09:33:32.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266740: ['FBtr0345241'] 2021-10-25 09:33:32.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266740 has a single transcript. 2021-10-25 09:33:32.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.296 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266741: ['FBtr0345242'] 2021-10-25 09:33:32.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266741 has a single transcript. 2021-10-25 09:33:32.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266742: ['FBtr0345243', 'FBtr0345244'] 2021-10-25 09:33:32.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039257: ['FBtr0305667', 'FBtr0305668'] 2021-10-25 09:33:32.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035889: ['FBtr0076664', 'FBtr0076665', 'FBtr0346628'] 2021-10-25 09:33:32.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:32.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032314: ['FBtr0301184'] 2021-10-25 09:33:32.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032314 has a single transcript. 2021-10-25 09:33:32.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1466929, 1467802), (1466933, 1467802), (1467617, 1467802), (1467617, 1467696), (1467964, 1468051), (1468185, 1468250), (1468382, 1468446)] 2021-10-25 09:33:32.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24984457, 24985758), (24985983, 25001392), (25001499, 25011881), (25011920, 25012821), (25013019, 25013085), (25013340, 25013403), (25021174, 25021256)] 2021-10-25 09:33:32.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032315: ['FBtr0080175', 'FBtr0340557'] 2021-10-25 09:33:32.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052686: ['FBtr0071467', 'FBtr0071468'] 2021-10-25 09:33:32.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8404050, 8404102), (8404510, 8405213)] 2021-10-25 09:33:32.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8404102, 8405277, 'FBtr0346628_exon_1') contains intron (8404510, 8405213) 2021-10-25 09:33:32.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346628_exon_1'] 2021-10-25 09:33:32.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:32.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266743: ['FBtr0345245'] 2021-10-25 09:33:32.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266743 has a single transcript. 2021-10-25 09:33:32.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266744: ['FBtr0345246', 'FBtr0345247'] 2021-10-25 09:33:32.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10374277, 10374341)] 2021-10-25 09:33:32.434 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10371716, 10375316, 'FBtr0071468_exon_1') contains intron (10374277, 10374341) 2021-10-25 09:33:32.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071468_exon_1'] 2021-10-25 09:33:32.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039258: ['FBtr0084755'] 2021-10-25 09:33:32.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039258 has a single transcript. 2021-10-25 09:33:32.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001091: ['FBtr0088903', 'FBtr0100479'] 2021-10-25 09:33:32.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039259: ['FBtr0084797'] 2021-10-25 09:33:32.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039259 has a single transcript. 2021-10-25 09:33:32.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039260: ['FBtr0084796'] 2021-10-25 09:33:32.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039260 has a single transcript. 2021-10-25 09:33:32.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24229975, 24230542), (24230609, 24230668), (24230612, 24230668), (24230958, 24231023)] 2021-10-25 09:33:32.477 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.478 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032318: ['FBtr0080145', 'FBtr0306114', 'FBtr0306115'] 2021-10-25 09:33:32.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039261: ['FBtr0084794', 'FBtr0084795', 'FBtr0113281', 'FBtr0334507'] 2021-10-25 09:33:32.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052687: ['FBtr0071458', 'FBtr0336901'] 2021-10-25 09:33:32.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:32.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035890: ['FBtr0076610', 'FBtr0076611'] 2021-10-25 09:33:32.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266745: ['FBtr0345248'] 2021-10-25 09:33:32.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266745 has a single transcript. 2021-10-25 09:33:32.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266747: ['FBtr0345281', 'FBtr0345282'] 2021-10-25 09:33:32.559 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10483240, 10483341), (10483558, 10485710), (10486733, 10486855)] 2021-10-25 09:33:32.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.560 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10936713, 10937076), (10937191, 10937305), (10937234, 10937305), (10937456, 10937514)] 2021-10-25 09:33:32.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001092: ['FBtr0074112', 'FBtr0332618'] 2021-10-25 09:33:32.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026873: ['FBtr0070308', 'FBtr0114454'] 2021-10-25 09:33:32.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8405481, 8405536)] 2021-10-25 09:33:32.572 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8405474, 8407354, 'FBtr0076610_exon_1') contains intron (8405481, 8405536) 2021-10-25 09:33:32.572 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076610_exon_1'] 2021-10-25 09:33:32.572 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25034623, 25034687), (25035600, 25035666), (25036331, 25036392), (25036536, 25036622), (25036717, 25038210), (25038318, 25038420), (25038516, 25038652), (25038674, 25038845), (25038879, 25038943)] 2021-10-25 09:33:32.580 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25038420, 25038674, 'FBtr0084795_exon_3') contains intron (25038516, 25038652) 2021-10-25 09:33:32.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084795_exon_3'] 2021-10-25 09:33:32.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2744698, 2744757)] 2021-10-25 09:33:32.598 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2744304, 2744800, 'FBtr0345281_exon_1') contains intron (2744698, 2744757) 2021-10-25 09:33:32.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345281_exon_1'] 2021-10-25 09:33:32.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.604 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15868243, 15868317)] 2021-10-25 09:33:32.605 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1866138, 1866185), (1866138, 1866208), (1866495, 1866562)] 2021-10-25 09:33:32.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052690: ['FBtr0303456'] 2021-10-25 09:33:32.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052690 has a single transcript. 2021-10-25 09:33:32.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052693: ['FBtr0071420'] 2021-10-25 09:33:32.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052693 has a single transcript. 2021-10-25 09:33:32.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035896: ['FBtr0076659', 'FBtr0345602'] 2021-10-25 09:33:32.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052694: ['FBtr0071410', 'FBtr0071411', 'FBtr0071412', 'FBtr0340479', 'FBtr0307380', 'FBtr0307381', 'FBtr0307382'] 2021-10-25 09:33:32.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026874: ['FBtr0290198'] 2021-10-25 09:33:32.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026874 has a single transcript. 2021-10-25 09:33:32.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032321: ['FBtr0080146', 'FBtr0340549'] 2021-10-25 09:33:32.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266748: ['FBtr0345307'] 2021-10-25 09:33:32.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266748 has a single transcript. 2021-10-25 09:33:32.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001098: ['FBtr0089497', 'FBtr0089498', 'FBtr0089496', 'FBtr0335205'] 2021-10-25 09:33:32.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026876: ['FBtr0070245'] 2021-10-25 09:33:32.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026876 has a single transcript. 2021-10-25 09:33:32.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266749: ['FBtr0345308', 'FBtr0345309'] 2021-10-25 09:33:32.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026878: ['FBtr0070342', 'FBtr0310443'] 2021-10-25 09:33:32.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8444552, 8449148)] 2021-10-25 09:33:32.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.680 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.709 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10970687, 10970747), (10970880, 10970956), (10971257, 10971316)] 2021-10-25 09:33:32.709 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17638809, 17639027), (17638944, 17639027), (17639115, 17639339), (17639493, 17639565)] 2021-10-25 09:33:32.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2043413, 2043605)] 2021-10-25 09:33:32.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039264: ['FBtr0113282'] 2021-10-25 09:33:32.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039264 has a single transcript. 2021-10-25 09:33:32.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039265: ['FBtr0084760', 'FBtr0084761', 'FBtr0334503'] 2021-10-25 09:33:32.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035900: ['FBtr0076656'] 2021-10-25 09:33:32.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035900 has a single transcript. 2021-10-25 09:33:32.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035901: ['FBtr0076620'] 2021-10-25 09:33:32.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035901 has a single transcript. 2021-10-25 09:33:32.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035902: ['FBtr0076655'] 2021-10-25 09:33:32.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035902 has a single transcript. 2021-10-25 09:33:32.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23936645, 23936980), (23936645, 23937422), (23937019, 23937422), (23937627, 23937731), (23938051, 23938120), (23938555, 23942593), (23938555, 23938622)] 2021-10-25 09:33:32.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035903: ['FBtr0076621', 'FBtr0333054', 'FBtr0333055'] 2021-10-25 09:33:32.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032322: ['FBtr0080147', 'FBtr0329948'] 2021-10-25 09:33:32.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0026879: ['FBtr0070159'] 2021-10-25 09:33:32.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0026879 has a single transcript. 2021-10-25 09:33:32.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266750: ['FBtr0347220', 'FBtr0345310'] 2021-10-25 09:33:32.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027052: ['FBtr0080027'] 2021-10-25 09:33:32.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027052 has a single transcript. 2021-10-25 09:33:32.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027053: ['FBtr0083292', 'FBtr0334535'] 2021-10-25 09:33:32.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9989872, 9992977), (9989960, 9992977), (9993189, 9999192), (9999300, 10000351), (9999300, 10004391), (9999300, 9999543), (9999300, 10001853), (10000676, 10001100), (10002166, 10002532), (10004759, 10005153), (10004759, 10005168), (10005289, 10005374), (10005602, 10005672)] 2021-10-25 09:33:32.811 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10000351, 10003006, 'FBtr0071410_exon_4') contains intron (10000676, 10001100) 2021-10-25 09:33:32.812 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10001100, 10003006, 'FBtr0340479_exon_5') contains intron (10002166, 10002532) 2021-10-25 09:33:32.812 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10001100, 10003006, 'FBtr0307382_exon_5') contains intron (10002166, 10002532) 2021-10-25 09:33:32.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071410_exon_4', 'FBtr0340479_exon_5', 'FBtr0307382_exon_5'] 2021-10-25 09:33:32.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25047918, 25048024), (25048349, 25048441), (25048603, 25048664), (25048790, 25049271), (25048790, 25048878), (25048908, 25049271)] 2021-10-25 09:33:32.840 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25047705, 25048349, 'FBtr0084761_exon_1') contains intron (25047918, 25048024) 2021-10-25 09:33:32.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084761_exon_1'] 2021-10-25 09:33:32.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17652968, 17653286)] 2021-10-25 09:33:32.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.857 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10972348, 10972464)] 2021-10-25 09:33:32.858 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.858 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8513073, 8515070), (8515165, 8515383), (8516450, 8516512), (8517066, 8517199), (8517258, 8517315), (8517417, 8517471)] 2021-10-25 09:33:32.882 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8517315, 8518614, 'FBtr0333055_exon_6') contains intron (8517417, 8517471) 2021-10-25 09:33:32.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333055_exon_6'] 2021-10-25 09:33:32.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260713: ['FBtr0301214'] 2021-10-25 09:33:32.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260713 has a single transcript. 2021-10-25 09:33:32.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260718: ['FBtr0301174', 'FBtr0331679'] 2021-10-25 09:33:32.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16470439, 16470492), (16471063, 16471128), (16471069, 16471128)] 2021-10-25 09:33:32.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.931 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266751: ['FBtr0345327'] 2021-10-25 09:33:32.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266751 has a single transcript. 2021-10-25 09:33:32.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266752: ['FBtr0345328'] 2021-10-25 09:33:32.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266752 has a single transcript. 2021-10-25 09:33:32.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266753: ['FBtr0345329', 'FBtr0345330'] 2021-10-25 09:33:32.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21577545, 21577605), (21577549, 21577605)] 2021-10-25 09:33:32.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:32.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:32.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032329: ['FBtr0080162'] 2021-10-25 09:33:32.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032329 has a single transcript. 2021-10-25 09:33:33.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032330: ['FBtr0080161', 'FBtr0331197', 'FBtr0343624', 'FBtr0347160'] 2021-10-25 09:33:33.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039266: ['FBtr0084762', 'FBtr0084763', 'FBtr0113283', 'FBtr0334504'] 2021-10-25 09:33:33.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027054: ['FBtr0088859', 'FBtr0301230'] 2021-10-25 09:33:33.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26519651, 26520191), (26519756, 26520191)] 2021-10-25 09:33:33.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260719: ['FBtr0301172'] 2021-10-25 09:33:33.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260719 has a single transcript. 2021-10-25 09:33:33.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260720: ['FBtr0301177'] 2021-10-25 09:33:33.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260720 has a single transcript. 2021-10-25 09:33:33.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001099: ['FBtr0091757', 'FBtr0346516', 'FBtr0334082'] 2021-10-25 09:33:33.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035904: ['FBtr0076622'] 2021-10-25 09:33:33.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035904 has a single transcript. 2021-10-25 09:33:33.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260721: ['FBtr0301175'] 2021-10-25 09:33:33.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260721 has a single transcript. 2021-10-25 09:33:33.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035906: ['FBtr0076653', 'FBtr0076654'] 2021-10-25 09:33:33.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260722: ['FBtr0301176', 'FBtr0301248', 'FBtr0301249', 'FBtr0301250'] 2021-10-25 09:33:33.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7972250, 7972337), (7972421, 7972497), (7973188, 7973247)] 2021-10-25 09:33:33.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266756: ['FBtr0334285', 'FBtr0334286', 'FBtr0334287', 'FBtr0334288', 'FBtr0334289', 'FBtr0334290', 'FBtr0334291', 'FBtr0334292', 'FBtr0334293'] 2021-10-25 09:33:33.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8521672, 8521731), (8522318, 8523400), (8523221, 8523400)] 2021-10-25 09:33:33.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.182 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11014652, 11028994), (11028939, 11028994), (11029687, 11029942), (11030423, 11030664), (11031135, 11035515), (11036269, 11055322), (11055479, 11066544), (11055479, 11056411)] 2021-10-25 09:33:33.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15509881, 15509936), (15510231, 15510604)] 2021-10-25 09:33:33.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25049946, 25051180), (25050368, 25051180), (25050617, 25051180), (25051556, 25052482)] 2021-10-25 09:33:33.235 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25050242, 25051556, 'FBtr0084763_exon_1') contains intron (25050368, 25051180) 2021-10-25 09:33:33.236 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084763_exon_1'] 2021-10-25 09:33:33.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027055: ['FBtr0078269'] 2021-10-25 09:33:33.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027055 has a single transcript. 2021-10-25 09:33:33.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027057: ['FBtr0075074'] 2021-10-25 09:33:33.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027057 has a single transcript. 2021-10-25 09:33:33.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027066: ['FBtr0086127', 'FBtr0086129', 'FBtr0086130', 'FBtr0086131', 'FBtr0300285', 'FBtr0332939'] 2021-10-25 09:33:33.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9549810, 9551315), (9549810, 9551765), (9549810, 9551570), (9549810, 9551700)] 2021-10-25 09:33:33.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035907: ['FBtr0076652'] 2021-10-25 09:33:33.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035907 has a single transcript. 2021-10-25 09:33:33.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035909: ['FBtr0301629', 'FBtr0076626'] 2021-10-25 09:33:33.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8535186, 8535373), (8536092, 8536167), (8536643, 8536890), (8537016, 8537081)] 2021-10-25 09:33:33.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052695: ['FBtr0071398', 'FBtr0343033', 'FBtr0346169'] 2021-10-25 09:33:33.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001104: ['FBtr0076934'] 2021-10-25 09:33:33.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001104 has a single transcript. 2021-10-25 09:33:33.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001105: ['FBtr0074107', 'FBtr0074108', 'FBtr0074110', 'FBtr0074111', 'FBtr0331597', 'FBtr0346794'] 2021-10-25 09:33:33.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032331: ['FBtr0113035'] 2021-10-25 09:33:33.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032331 has a single transcript. 2021-10-25 09:33:33.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035911: ['FBtr0076651'] 2021-10-25 09:33:33.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035911 has a single transcript. 2021-10-25 09:33:33.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032335: ['FBtr0080193'] 2021-10-25 09:33:33.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032335 has a single transcript. 2021-10-25 09:33:33.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035914: ['FBtr0076636', 'FBtr0076637', 'FBtr0300194', 'FBtr0330165'] 2021-10-25 09:33:33.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032336: ['FBtr0080234', 'FBtr0301761'] 2021-10-25 09:33:33.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9873670, 9873733)] 2021-10-25 09:33:33.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.463 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6749389, 6752631), (6749584, 6752631), (6751713, 6752631), (6752231, 6752631), (6752784, 6752842), (6752988, 6754179), (6752988, 6753226), (6753503, 6754701), (6754438, 6754704), (6754438, 6754701), (6754844, 6754898), (6754981, 6755044), (6755117, 6755184)] 2021-10-25 09:33:33.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14807331, 14807389), (14807598, 14807659), (14807934, 14808042), (14808297, 14808362), (14808557, 14808626), (14808811, 14823862), (14808811, 14809590), (14808811, 14814248), (14808811, 14809266), (14810286, 14811501), (14821283, 14823862), (14823986, 14824071), (14824202, 14825036), (14824307, 14825036), (14825175, 14825236), (14827284, 14827528), (14827656, 14830361), (14827656, 14853472), (14830694, 14853472), (14830694, 14859308), (14860067, 14873163), (14860067, 14875227)] 2021-10-25 09:33:33.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.469 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039269: ['FBtr0084787', 'FBtr0301664'] 2021-10-25 09:33:33.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260741: ['FBtr0082511'] 2021-10-25 09:33:33.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260741 has a single transcript. 2021-10-25 09:33:33.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260742: ['FBtr0082510', 'FBtr0113223', 'FBtr0334155', 'FBtr0334156'] 2021-10-25 09:33:33.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11076861, 11076926), (11076864, 11076926), (11077066, 11077122), (11077238, 11081153)] 2021-10-25 09:33:33.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25064796, 25064860), (25064994, 25065147), (25065414, 25065477)] 2021-10-25 09:33:33.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.651 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25064860, 25065414, 'FBtr0301664_exon_2') contains intron (25064994, 25065147) 2021-10-25 09:33:33.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301664_exon_2'] 2021-10-25 09:33:33.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052698: ['FBtr0071386', 'FBtr0336923', 'FBtr0307489', 'FBtr0346170'] 2021-10-25 09:33:33.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8604858, 8607058), (8604914, 8608502), (8604914, 8609733), (8607422, 8609733), (8608698, 8609733), (8610356, 8613657), (8613819, 8614601), (8614809, 8614867), (8615063, 8615218)] 2021-10-25 09:33:33.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032337: ['FBtr0114455', 'FBtr0343623'] 2021-10-25 09:33:33.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039270: ['FBtr0084765'] 2021-10-25 09:33:33.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039270 has a single transcript. 2021-10-25 09:33:33.729 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076636': ['FBtr0330165']} 2021-10-25 09:33:33.729 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330165']] 2021-10-25 09:33:33.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039271: ['FBtr0304718'] 2021-10-25 09:33:33.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039271 has a single transcript. 2021-10-25 09:33:33.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039272: ['FBtr0084767', 'FBtr0084768', 'FBtr0113284', 'FBtr0302406', 'FBtr0309271', 'FBtr0302404', 'FBtr0302405'] 2021-10-25 09:33:33.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15860250, 15860744), (15860250, 15860988), (15860250, 15861376), (15860322, 15861223), (15860322, 15861139), (15861153, 15861235), (15861486, 15861565), (15861492, 15861565)] 2021-10-25 09:33:33.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15860988, 15861492, 'FBtr0074107_exon_2') contains intron (15861153, 15861235) 2021-10-25 09:33:33.758 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15861139, 15861492, 'FBtr0074111_exon_2') contains intron (15861153, 15861235) 2021-10-25 09:33:33.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11965486, 11965544), (11966286, 11966487), (11966286, 11966454), (11966739, 11966796), (11967125, 11967187)] 2021-10-25 09:33:33.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15860705, 15861492, 'FBtr0346794_exon_1') contains intron (15861153, 15861235) 2021-10-25 09:33:33.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11965544, 11966739, 'FBtr0113223_exon_3') contains intron (11966286, 11966487) 2021-10-25 09:33:33.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074107_exon_2', 'FBtr0074111_exon_2', 'FBtr0346794_exon_1'] 2021-10-25 09:33:33.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113223_exon_3'] 2021-10-25 09:33:33.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11083924, 11084019), (11083945, 11084019), (11084105, 11084166), (11084347, 11084810)] 2021-10-25 09:33:33.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035915: ['FBtr0076638'] 2021-10-25 09:33:33.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035915 has a single transcript. 2021-10-25 09:33:33.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035916: ['FBtr0076648'] 2021-10-25 09:33:33.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035916 has a single transcript. 2021-10-25 09:33:33.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9783399, 9811787), (9788629, 9811787), (9788732, 9811787), (9795061, 9811787), (9812156, 9832491), (9832542, 9836313), (9836450, 9836593), (9836806, 9845700), (9845796, 9845958), (9846180, 9848531), (9848715, 9848900)] 2021-10-25 09:33:33.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035917: ['FBtr0089568', 'FBtr0089567', 'FBtr0089561', 'FBtr0089562', 'FBtr0089563', 'FBtr0089564', 'FBtr0089565', 'FBtr0089566', 'FBtr0301154', 'FBtr0301156', 'FBtr0301157', 'FBtr0301158'] 2021-10-25 09:33:33.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032338: ['FBtr0307171', 'FBtr0343621', 'FBtr0304586'] 2021-10-25 09:33:33.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027070: ['FBtr0081107', 'FBtr0081108', 'FBtr0081105', 'FBtr0081106'] 2021-10-25 09:33:33.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260743: ['FBtr0082484', 'FBtr0334153'] 2021-10-25 09:33:33.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25071164, 25071496), (25071164, 25071470), (25071189, 25071496), (25071189, 25071470), (25071215, 25071470), (25071428, 25071496), (25071676, 25071738), (25072125, 25072186), (25072263, 25072319)] 2021-10-25 09:33:33.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11087152, 11088357)] 2021-10-25 09:33:33.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.973 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0302406': ['FBtr0309271']} 2021-10-25 09:33:33.973 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0309271']] 2021-10-25 09:33:33.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18826823, 18826916), (18826823, 18826901), (18826823, 18826997), (18826823, 18826904), (18827259, 18827509), (18827886, 18827945)] 2021-10-25 09:33:33.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:33.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11967887, 11969216), (11969276, 11970094), (11970229, 11970287), (11970773, 11970833), (11970974, 11971030)] 2021-10-25 09:33:33.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:33.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052699: ['FBtr0110850'] 2021-10-25 09:33:34.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052699 has a single transcript. 2021-10-25 09:33:34.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001108: ['FBtr0075756'] 2021-10-25 09:33:34.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001108 has a single transcript. 2021-10-25 09:33:34.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052702: ['FBtr0273437'] 2021-10-25 09:33:34.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052702 has a single transcript. 2021-10-25 09:33:34.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001112: ['FBtr0081596', 'FBtr0472596'] 2021-10-25 09:33:34.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266757: ['FBtr0273285', 'FBtr0273286', 'FBtr0273287', 'FBtr0273288', 'FBtr0273289', 'FBtr0273290', 'FBtr0273291'] 2021-10-25 09:33:34.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052703: ['FBtr0071329', 'FBtr0302965', 'FBtr0302966'] 2021-10-25 09:33:34.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260744: ['FBtr0082508', 'FBtr0347147'] 2021-10-25 09:33:34.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032339: ['FBtr0080196', 'FBtr0343622'] 2021-10-25 09:33:34.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7254324, 7257123), (7257244, 7257316), (7257493, 7265364)] 2021-10-25 09:33:34.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.079 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081596': ['FBtr0472596']} 2021-10-25 09:33:34.079 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0472596']] 2021-10-25 09:33:34.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11974012, 11974073), (11974227, 11974309), (11974457, 11974545)] 2021-10-25 09:33:34.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001114: ['FBtr0079727', 'FBtr0307091'] 2021-10-25 09:33:34.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9263012, 9263710), (9263575, 9263710), (9264162, 9264231), (9264328, 9264401), (9264542, 9264622), (9264829, 9264892), (9265083, 9265181), (9265465, 9266918), (9267030, 9267179), (9267111, 9267179)] 2021-10-25 09:33:34.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.095 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11091878, 11091941), (11092152, 11092208), (11092492, 11092552), (11092726, 11092781), (11094635, 11094762)] 2021-10-25 09:33:34.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027073: ['FBtr0071625'] 2021-10-25 09:33:34.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027073 has a single transcript. 2021-10-25 09:33:34.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027074: ['FBtr0300818'] 2021-10-25 09:33:34.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027074 has a single transcript. 2021-10-25 09:33:34.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8672783, 8673124), (8674369, 8674762)] 2021-10-25 09:33:34.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.135 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027079: ['FBtr0087734', 'FBtr0087735', 'FBtr0333148'] 2021-10-25 09:33:34.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8624683, 8626960), (8626510, 8626960), (8627109, 8627426), (8627730, 8634582), (8630376, 8630516), (8630635, 8634582), (8634783, 8635001), (8635081, 8635680), (8635081, 8636468), (8635081, 8637438), (8635081, 8638156), (8635752, 8637438), (8635752, 8638156), (8637598, 8638156), (8638195, 8638266)] 2021-10-25 09:33:34.146 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8630242, 8630635, 'FBtr0089567_exon_1') contains intron (8630376, 8630516) 2021-10-25 09:33:34.148 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089567_exon_1'] 2021-10-25 09:33:34.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260745: ['FBtr0082489', 'FBtr0082490', 'FBtr0082491', 'FBtr0082492', 'FBtr0082493', 'FBtr0082494', 'FBtr0082495', 'FBtr0082496', 'FBtr0082497', 'FBtr0082498', 'FBtr0082499', 'FBtr0082500', 'FBtr0082501', 'FBtr0082502', 'FBtr0082503', 'FBtr0306696'] 2021-10-25 09:33:34.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032341: ['FBtr0080230', 'FBtr0306139'] 2021-10-25 09:33:34.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039273: ['FBtr0113285'] 2021-10-25 09:33:34.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039273 has a single transcript. 2021-10-25 09:33:34.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039274: ['FBtr0084769'] 2021-10-25 09:33:34.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039274 has a single transcript. 2021-10-25 09:33:34.196 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8906142, 8906258), (8906191, 8906258), (8906194, 8906258), (8906359, 8906417), (8906708, 8906818), (8906939, 8907064), (8907246, 8907523), (8907660, 8907721), (8908924, 8908987), (8908934, 8908987), (8909159, 8909212), (8910464, 8910523), (8910471, 8910523), (8910859, 8911021), (8910972, 8911021), (8911199, 8911264), (8911215, 8911285), (8911220, 8911285), (8911388, 8911446), (8911404, 8911446), (8911805, 8911877), (8912206, 8912309)] 2021-10-25 09:33:34.196 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8911021, 8911404, 'FBtr0273286_exon_4') contains intron (8911199, 8911264) 2021-10-25 09:33:34.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8911021, 8911388, 'FBtr0273287_exon_3') contains intron (8911199, 8911264) 2021-10-25 09:33:34.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001120: ['FBtr0075697'] 2021-10-25 09:33:34.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8906417, 8906939, 'FBtr0273288_exon_10') contains intron (8906708, 8906818) 2021-10-25 09:33:34.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001120 has a single transcript. 2021-10-25 09:33:34.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8907721, 8909159, 'FBtr0273288_exon_7') contains intron (8908924, 8908987) 2021-10-25 09:33:34.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8910523, 8911215, 'FBtr0273288_exon_5') contains intron (8910859, 8911021) 2021-10-25 09:33:34.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8911021, 8911388, 'FBtr0273290_exon_3') contains intron (8911199, 8911264) 2021-10-25 09:33:34.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8911021, 8911388, 'FBtr0273291_exon_3') contains intron (8911199, 8911264) 2021-10-25 09:33:34.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273286_exon_4', 'FBtr0273287_exon_3', 'FBtr0273288_exon_10', 'FBtr0273288_exon_7', 'FBtr0273288_exon_5', 'FBtr0273290_exon_3', 'FBtr0273291_exon_3'] 2021-10-25 09:33:34.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039277: ['FBtr0113286'] 2021-10-25 09:33:34.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039277 has a single transcript. 2021-10-25 09:33:34.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052704: ['FBtr0071333'] 2021-10-25 09:33:34.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052704 has a single transcript. 2021-10-25 09:33:34.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13198919, 13198960), (13198919, 13198973), (13199184, 13199335), (13199503, 13199561), (13200824, 13200888), (13200824, 13200997), (13200906, 13200997), (13202027, 13202091)] 2021-10-25 09:33:34.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039280: ['FBtr0084782'] 2021-10-25 09:33:34.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039280 has a single transcript. 2021-10-25 09:33:34.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001122: ['FBtr0088264', 'FBtr0088265', 'FBtr0088266', 'FBtr0088267', 'FBtr0088268', 'FBtr0088269', 'FBtr0088270', 'FBtr0088271', 'FBtr0088272', 'FBtr0333064'] 2021-10-25 09:33:34.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052706: ['FBtr0071287'] 2021-10-25 09:33:34.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052706 has a single transcript. 2021-10-25 09:33:34.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11103169, 11103843), (11103169, 11103322), (11103409, 11103843), (11104280, 11104351), (11105136, 11105204), (11105524, 11105606), (11106011, 11106066)] 2021-10-25 09:33:34.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039282: ['FBtr0301670', 'FBtr0302168', 'FBtr0302169', 'FBtr0302170', 'FBtr0302171', 'FBtr0302172', 'FBtr0345299'] 2021-10-25 09:33:34.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052707: ['FBtr0071285', 'FBtr0309872'] 2021-10-25 09:33:34.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9083165, 9083240), (9083483, 9083541), (9083941, 9083998), (9084169, 9084236), (9084175, 9084236), (9084399, 9084468)] 2021-10-25 09:33:34.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032343: ['FBtr0080229'] 2021-10-25 09:33:34.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032343 has a single transcript. 2021-10-25 09:33:34.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032345: ['FBtr0080227'] 2021-10-25 09:33:34.295 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032345 has a single transcript. 2021-10-25 09:33:34.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032346: ['FBtr0080226'] 2021-10-25 09:33:34.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032346 has a single transcript. 2021-10-25 09:33:34.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032348: ['FBtr0080200'] 2021-10-25 09:33:34.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032348 has a single transcript. 2021-10-25 09:33:34.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032350: ['FBtr0080222'] 2021-10-25 09:33:34.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032350 has a single transcript. 2021-10-25 09:33:34.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027080: ['FBtr0075410'] 2021-10-25 09:33:34.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027080 has a single transcript. 2021-10-25 09:33:34.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052708: ['FBtr0071286'] 2021-10-25 09:33:34.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052708 has a single transcript. 2021-10-25 09:33:34.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032354: ['FBtr0080202', 'FBtr0343614'] 2021-10-25 09:33:34.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052712: ['FBtr0300386'] 2021-10-25 09:33:34.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052712 has a single transcript. 2021-10-25 09:33:34.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027081: ['FBtr0080331', 'FBtr0080332', 'FBtr0080333', 'FBtr0346436'] 2021-10-25 09:33:34.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052713: ['FBtr0071243', 'FBtr0343355'] 2021-10-25 09:33:34.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25131351, 25132340), (25131362, 25132340), (25131362, 25132320), (25131446, 25132340), (25131459, 25132340), (25131809, 25132340), (25132062, 25132340), (25132501, 25132591), (25132953, 25133015), (25133767, 25133829), (25133996, 25134051), (25134398, 25134462), (25134624, 25134691), (25134880, 25134946), (25135076, 25135149), (25135248, 25135307), (25135458, 25135525)] 2021-10-25 09:33:34.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:34.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.388 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:34.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12103834, 12104491), (12104056, 12104491), (12104382, 12104491), (12104552, 12104687), (12105121, 12105175)] 2021-10-25 09:33:34.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10438106, 10439374), (10438296, 10439374), (10438351, 10439374), (10438492, 10439374), (10438737, 10439374), (10439445, 10445383), (10439631, 10448198), (10444462, 10445246), (10445624, 10448198), (10448383, 10448471), (10448632, 10460902), (10459360, 10460902), (10461031, 10461095), (10461225, 10461289), (10461443, 10461512)] 2021-10-25 09:33:34.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032358: ['FBtr0080212'] 2021-10-25 09:33:34.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032358 has a single transcript. 2021-10-25 09:33:34.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052718: ['FBtr0332490', 'FBtr0332491', 'FBtr0300461'] 2021-10-25 09:33:34.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032360: ['FBtr0080251', 'FBtr0345463', 'FBtr0345464'] 2021-10-25 09:33:34.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266758: ['FBtr0084647', 'FBtr0084648', 'FBtr0306024', 'FBtr0334336'] 2021-10-25 09:33:34.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11985487, 11985548), (11986231, 11986303), (11986772, 11986834), (11987120, 11987184), (11987376, 11988657), (11988799, 11989209), (11989325, 11992741), (11989325, 11992071), (11989328, 11992071), (11989328, 11989842), (11989328, 11992741), (11989523, 11992071), (11989523, 11992741), (11992143, 11992741), (11992852, 11993131), (11992852, 11993248), (11992874, 11993248)] 2021-10-25 09:33:34.518 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11992741, 11993315, 'FBtr0082492_exon_1') contains intron (11992852, 11993131) 2021-10-25 09:33:34.519 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11992741, 11993315, 'FBtr0082494_exon_1') contains intron (11992852, 11993131) 2021-10-25 09:33:34.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7778353, 7778433), (7778353, 7778436), (7778365, 7778433), (7778571, 7778634), (7779060, 7779118)] 2021-10-25 09:33:34.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11342528, 11342582), (11342779, 11342836), (11343045, 11343099)] 2021-10-25 09:33:34.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082492_exon_1', 'FBtr0082494_exon_1'] 2021-10-25 09:33:34.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.568 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24545069, 24551328), (24549139, 24549684), (24549764, 24551328), (24551812, 24551873), (24552425, 24552485), (24552656, 24553994), (24552656, 24552897), (24552656, 24553233), (24552983, 24554355), (24553331, 24554355), (24554080, 24554355), (24554404, 24554464), (24554641, 24554701), (24555133, 24555458), (24555133, 24555467), (24555962, 24556235)] 2021-10-25 09:33:34.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.569 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027082: ['FBtr0072948', 'FBtr0333447'] 2021-10-25 09:33:34.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032361: ['FBtr0080248'] 2021-10-25 09:33:34.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032361 has a single transcript. 2021-10-25 09:33:34.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035918: ['FBtr0076647'] 2021-10-25 09:33:34.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035918 has a single transcript. 2021-10-25 09:33:34.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2650960, 2651018), (2651280, 2651333), (2651280, 2651341), (2651593, 2651655)] 2021-10-25 09:33:34.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052719: ['FBtr0071083'] 2021-10-25 09:33:34.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052719 has a single transcript. 2021-10-25 09:33:34.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032362: ['FBtr0305261'] 2021-10-25 09:33:34.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032362 has a single transcript. 2021-10-25 09:33:34.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052720: ['FBtr0304870'] 2021-10-25 09:33:34.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052720 has a single transcript. 2021-10-25 09:33:34.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035921: ['FBtr0273348', 'FBtr0273349'] 2021-10-25 09:33:34.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052726: ['FBtr0071059', 'FBtr0343326'] 2021-10-25 09:33:34.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032363: ['FBtr0080246', 'FBtr0080247', 'FBtr0336630', 'FBtr0336631'] 2021-10-25 09:33:34.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039283: ['FBtr0084780'] 2021-10-25 09:33:34.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039283 has a single transcript. 2021-10-25 09:33:34.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039286: ['FBtr0084803', 'FBtr0330288', 'FBtr0330289'] 2021-10-25 09:33:34.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027083: ['FBtr0082895', 'FBtr0337021', 'FBtr0347148'] 2021-10-25 09:33:34.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7425612, 7425678)] 2021-10-25 09:33:34.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8645084, 8645167), (8645288, 8645748), (8645889, 8646115)] 2021-10-25 09:33:34.669 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8645748, 8646822, 'FBtr0273348_exon_1') contains intron (8645889, 8646115) 2021-10-25 09:33:34.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273348_exon_1'] 2021-10-25 09:33:34.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11509403, 11509466), (11509683, 11509734), (11509964, 11510023), (11510262, 11510320), (11510540, 11510595), (11510850, 11511178), (11510850, 11511055), (11511544, 11511608), (11515670, 11515725), (11515673, 11515725), (11515817, 11516508), (11516657, 11516722), (11516801, 11516865)] 2021-10-25 09:33:34.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266762: ['FBtr0345338'] 2021-10-25 09:33:34.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266762 has a single transcript. 2021-10-25 09:33:34.711 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11516508, 11517081, 'FBtr0080246_exon_1') contains intron (11516657, 11516722) 2021-10-25 09:33:34.711 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11516722, 11517081, 'FBtr0336630_exon_1') contains intron (11516801, 11516865) 2021-10-25 09:33:34.711 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11516508, 11517081, 'FBtr0336631_exon_1') contains intron (11516657, 11516722) 2021-10-25 09:33:34.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080246_exon_1', 'FBtr0336630_exon_1', 'FBtr0336631_exon_1'] 2021-10-25 09:33:34.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052732: ['FBtr0071039'] 2021-10-25 09:33:34.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266763: ['FBtr0345362'] 2021-10-25 09:33:34.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266763 has a single transcript. 2021-10-25 09:33:34.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052732 has a single transcript. 2021-10-25 09:33:34.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035922: ['FBtr0076568', 'FBtr0273328'] 2021-10-25 09:33:34.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25185429, 25189885)] 2021-10-25 09:33:34.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266764: ['FBtr0345372'] 2021-10-25 09:33:34.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266764 has a single transcript. 2021-10-25 09:33:34.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14252011, 14252630), (14252828, 14258630), (14258895, 14258962), (14259385, 14259466), (14259747, 14259813)] 2021-10-25 09:33:34.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052733: ['FBtr0071001'] 2021-10-25 09:33:34.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052733 has a single transcript. 2021-10-25 09:33:34.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084803': ['FBtr0330288']} 2021-10-25 09:33:34.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330288']] 2021-10-25 09:33:34.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266766: ['FBtr0345374'] 2021-10-25 09:33:34.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266766 has a single transcript. 2021-10-25 09:33:34.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052736: ['FBtr0071007', 'FBtr0071008'] 2021-10-25 09:33:34.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266768: ['FBtr0345393'] 2021-10-25 09:33:34.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266768 has a single transcript. 2021-10-25 09:33:34.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266769: ['FBtr0345394'] 2021-10-25 09:33:34.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266769 has a single transcript. 2021-10-25 09:33:34.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266771: ['FBtr0445724'] 2021-10-25 09:33:34.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266771 has a single transcript. 2021-10-25 09:33:34.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266772: ['FBtr0345397'] 2021-10-25 09:33:34.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266772 has a single transcript. 2021-10-25 09:33:34.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8647254, 8649528), (8649638, 8649706), (8650459, 8650541)] 2021-10-25 09:33:34.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266773: ['FBtr0345398'] 2021-10-25 09:33:34.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266773 has a single transcript. 2021-10-25 09:33:34.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266774: ['FBtr0345399'] 2021-10-25 09:33:34.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266774 has a single transcript. 2021-10-25 09:33:34.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039288: ['FBtr0084804'] 2021-10-25 09:33:34.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039288 has a single transcript. 2021-10-25 09:33:34.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266775: ['FBtr0345400'] 2021-10-25 09:33:34.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266775 has a single transcript. 2021-10-25 09:33:34.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266776: ['FBtr0345401'] 2021-10-25 09:33:34.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266776 has a single transcript. 2021-10-25 09:33:34.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039290: ['FBtr0084805', 'FBtr0339256', 'FBtr0339257'] 2021-10-25 09:33:34.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266777: ['FBtr0345402'] 2021-10-25 09:33:34.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266777 has a single transcript. 2021-10-25 09:33:34.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7011408, 7011493), (7011756, 7011817)] 2021-10-25 09:33:34.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266778: ['FBtr0345403'] 2021-10-25 09:33:34.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266778 has a single transcript. 2021-10-25 09:33:34.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266780: ['FBtr0345405'] 2021-10-25 09:33:34.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266780 has a single transcript. 2021-10-25 09:33:34.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266781: ['FBtr0345407'] 2021-10-25 09:33:34.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266781 has a single transcript. 2021-10-25 09:33:34.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266782: ['FBtr0345406'] 2021-10-25 09:33:34.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266782 has a single transcript. 2021-10-25 09:33:34.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266783: ['FBtr0345408', 'FBtr0345409'] 2021-10-25 09:33:34.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035923: ['FBtr0076570', 'FBtr0333887'] 2021-10-25 09:33:34.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027084: ['FBtr0071366', 'FBtr0071367', 'FBtr0303560'] 2021-10-25 09:33:34.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001123: ['FBtr0072142', 'FBtr0072143', 'FBtr0072144', 'FBtr0301411', 'FBtr0343279'] 2021-10-25 09:33:34.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052740: ['FBtr0070979'] 2021-10-25 09:33:34.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052740 has a single transcript. 2021-10-25 09:33:34.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032364: ['FBtr0080239'] 2021-10-25 09:33:34.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032364 has a single transcript. 2021-10-25 09:33:34.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052745: ['FBtr0070932'] 2021-10-25 09:33:34.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052745 has a single transcript. 2021-10-25 09:33:34.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25200050, 25210298), (25209185, 25210298), (25209610, 25210298), (25210640, 25210700), (25210812, 25210870), (25211010, 25211256), (25212478, 25212535)] 2021-10-25 09:33:34.868 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032365: ['FBtr0100456', 'FBtr0321292'] 2021-10-25 09:33:34.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052748: ['FBtr0070911'] 2021-10-25 09:33:34.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052748 has a single transcript. 2021-10-25 09:33:34.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052750: ['FBtr0070881'] 2021-10-25 09:33:34.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052750 has a single transcript. 2021-10-25 09:33:34.887 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:34.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.887 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8721609, 8721660), (8724133, 8724191), (8724441, 8724491), (8724803, 8724866), (8725060, 8725125)] 2021-10-25 09:33:34.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.889 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052751: ['FBtr0070880', 'FBtr0340669'] 2021-10-25 09:33:34.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11520358, 11520456)] 2021-10-25 09:33:34.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9606553, 9606619), (9607567, 9607628), (9608292, 9608421), (9608292, 9608718), (9608655, 9608718)] 2021-10-25 09:33:34.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9608421, 9608841, 'FBtr0071367_exon_1') contains intron (9608655, 9608718) 2021-10-25 09:33:34.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071367_exon_1'] 2021-10-25 09:33:34.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6196877, 6196930), (6197627, 6197859), (6197651, 6197859), (6198490, 6198546)] 2021-10-25 09:33:34.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266784: ['FBtr0345410'] 2021-10-25 09:33:34.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266784 has a single transcript. 2021-10-25 09:33:34.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035924: ['FBtr0076576'] 2021-10-25 09:33:34.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035924 has a single transcript. 2021-10-25 09:33:34.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266785: ['FBtr0345411'] 2021-10-25 09:33:34.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266785 has a single transcript. 2021-10-25 09:33:34.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035926: ['FBtr0076591'] 2021-10-25 09:33:34.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035926 has a single transcript. 2021-10-25 09:33:34.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266786: ['FBtr0345412'] 2021-10-25 09:33:34.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266786 has a single transcript. 2021-10-25 09:33:34.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035928: ['FBtr0076590'] 2021-10-25 09:33:34.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035928 has a single transcript. 2021-10-25 09:33:34.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266787: ['FBtr0345420'] 2021-10-25 09:33:34.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266787 has a single transcript. 2021-10-25 09:33:34.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032366: ['FBtr0080245'] 2021-10-25 09:33:34.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032366 has a single transcript. 2021-10-25 09:33:34.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23942601, 23944229), (23942814, 23944229), (23944740, 23944806), (23944903, 23944959), (23945080, 23945695), (23945824, 23945897), (23946077, 23946136), (23946261, 23946446), (23946261, 23946437), (23946520, 23946600)] 2021-10-25 09:33:34.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:34.962 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:34.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035929: ['FBtr0076589'] 2021-10-25 09:33:34.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035929 has a single transcript. 2021-10-25 09:33:34.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039291: ['FBtr0084873'] 2021-10-25 09:33:34.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039291 has a single transcript. 2021-10-25 09:33:34.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266788: ['FBtr0345413'] 2021-10-25 09:33:34.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266788 has a single transcript. 2021-10-25 09:33:34.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032368: ['FBtr0340563'] 2021-10-25 09:33:34.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032368 has a single transcript. 2021-10-25 09:33:34.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035931: ['FBtr0076587'] 2021-10-25 09:33:34.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035931 has a single transcript. 2021-10-25 09:33:34.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266789: ['FBtr0345414'] 2021-10-25 09:33:34.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039293: ['FBtr0084808'] 2021-10-25 09:33:34.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039293 has a single transcript. 2021-10-25 09:33:34.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266789 has a single transcript. 2021-10-25 09:33:34.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032369: ['FBtr0080267', 'FBtr0340571', 'FBtr0340572'] 2021-10-25 09:33:34.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035932: ['FBtr0303232'] 2021-10-25 09:33:34.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035932 has a single transcript. 2021-10-25 09:33:34.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039294: ['FBtr0302299', 'FBtr0301090', 'FBtr0339260'] 2021-10-25 09:33:34.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035933: ['FBtr0076582'] 2021-10-25 09:33:34.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035933 has a single transcript. 2021-10-25 09:33:34.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266790: ['FBtr0345415'] 2021-10-25 09:33:34.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266790 has a single transcript. 2021-10-25 09:33:34.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052755: ['FBtr0070862'] 2021-10-25 09:33:34.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052755 has a single transcript. 2021-10-25 09:33:34.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266791: ['FBtr0345421'] 2021-10-25 09:33:34.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266791 has a single transcript. 2021-10-25 09:33:35.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035934: ['FBtr0331823', 'FBtr0331824', 'FBtr0331825', 'FBtr0331826', 'FBtr0331827'] 2021-10-25 09:33:35.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266795: ['FBtr0345451'] 2021-10-25 09:33:35.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266795 has a single transcript. 2021-10-25 09:33:35.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027085: ['FBtr0073348'] 2021-10-25 09:33:35.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027085 has a single transcript. 2021-10-25 09:33:35.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052756: ['FBtr0070860', 'FBtr0343295'] 2021-10-25 09:33:35.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266796: ['FBtr0345452'] 2021-10-25 09:33:35.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266796 has a single transcript. 2021-10-25 09:33:35.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027086: ['FBtr0078498', 'FBtr0078499', 'FBtr0078500'] 2021-10-25 09:33:35.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266797: ['FBtr0345453'] 2021-10-25 09:33:35.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266797 has a single transcript. 2021-10-25 09:33:35.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266798: ['FBtr0345454'] 2021-10-25 09:33:35.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266798 has a single transcript. 2021-10-25 09:33:35.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11645341, 11645395), (11645545, 11645600), (11645861, 11645919), (11646445, 11646557), (11646450, 11646557), (11646889, 11646946), (11647389, 11647449)] 2021-10-25 09:33:35.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266799: ['FBtr0345455'] 2021-10-25 09:33:35.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266799 has a single transcript. 2021-10-25 09:33:35.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25224606, 25224787), (25224618, 25224787), (25225514, 25225579), (25225517, 25225579), (25226623, 25227844), (25228146, 25230632), (25230960, 25232160), (25230960, 25232182)] 2021-10-25 09:33:35.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266800: ['FBtr0345456'] 2021-10-25 09:33:35.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266800 has a single transcript. 2021-10-25 09:33:35.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5945919, 5945980), (5946166, 5946232), (5946371, 5946458), (5946693, 5946754)] 2021-10-25 09:33:35.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266801: ['FBtr0346728', 'FBtr0346729', 'FBtr0345457', 'FBtr0345458', 'FBtr0345459', 'FBtr0345460'] 2021-10-25 09:33:35.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22288715, 22288794), (22288740, 22288794), (22288939, 22289003), (22290255, 22290312), (22291163, 22291228), (22291721, 22291782)] 2021-10-25 09:33:35.081 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22288664, 22288939, 'FBtr0078498_exon_1') contains intron (22288715, 22288794) 2021-10-25 09:33:35.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078498_exon_1'] 2021-10-25 09:33:35.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8894983, 8895046), (8895319, 8895377), (8895540, 8895594), (8896072, 8896126), (8896347, 8896851), (8896347, 8896524), (8896347, 8897060), (8896632, 8897060), (8896962, 8897060), (8897375, 8897441), (8898022, 8898082), (8898311, 8898731), (8898920, 8899760), (8899868, 8900237), (8900433, 8900505), (8900596, 8900651), (8900808, 8902948), (8900808, 8901456), (8903104, 8903545), (8903756, 8904686)] 2021-10-25 09:33:35.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052758: ['FBtr0070843', 'FBtr0340670', 'FBtr0339525'] 2021-10-25 09:33:35.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039296: ['FBtr0084870'] 2021-10-25 09:33:35.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032370: ['FBtr0080266'] 2021-10-25 09:33:35.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032370 has a single transcript. 2021-10-25 09:33:35.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039296 has a single transcript. 2021-10-25 09:33:35.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001124: ['FBtr0087231', 'FBtr0087232'] 2021-10-25 09:33:35.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032371: ['FBtr0080253', 'FBtr0340565'] 2021-10-25 09:33:35.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039297: ['FBtr0084809'] 2021-10-25 09:33:35.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039297 has a single transcript. 2021-10-25 09:33:35.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260746: ['FBtr0082487'] 2021-10-25 09:33:35.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260746 has a single transcript. 2021-10-25 09:33:35.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039298: ['FBtr0084810', 'FBtr0339258'] 2021-10-25 09:33:35.174 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5721696, 5721961), (5722140, 5722207), (5723043, 5723113), (5723196, 5723259), (5723362, 5737098), (5723362, 5723498), (5723362, 5723459)] 2021-10-25 09:33:35.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027087: ['FBtr0074593', 'FBtr0333804', 'FBtr0333805', 'FBtr0333806'] 2021-10-25 09:33:35.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260747: ['FBtr0074387', 'FBtr0343291'] 2021-10-25 09:33:35.187 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16138438, 16138766), (16138884, 16140329), (16140437, 16140499), (16140573, 16140633)] 2021-10-25 09:33:35.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.189 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11652569, 11652629), (11652569, 11652620)] 2021-10-25 09:33:35.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25240250, 25240365), (25240606, 25240673), (25240813, 25240867)] 2021-10-25 09:33:35.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8366446, 8388583), (8368631, 8388583), (8379382, 8388583), (8388800, 8389976), (8390010, 8391286), (8391400, 8392001), (8392175, 8393330), (8393489, 8394894), (8395058, 8397453), (8397574, 8397650), (8397762, 8397965), (8398114, 8398561), (8398756, 8399045), (8399189, 8399310), (8399551, 8402747), (8402875, 8443392), (8444687, 8477418)] 2021-10-25 09:33:35.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17149183, 17149833), (17149476, 17149833)] 2021-10-25 09:33:35.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.237 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0346728': ['FBtr0345459'], 'FBtr0346729': ['FBtr0345460']} 2021-10-25 09:33:35.237 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0345459'], ['FBtr0345460']] 2021-10-25 09:33:35.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001125: ['FBtr0077867', 'FBtr0077868'] 2021-10-25 09:33:35.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18515682, 18517810), (18515682, 18517613), (18515682, 18517467), (18516294, 18517467), (18517739, 18517810), (18518026, 18518824), (18519253, 18519314), (18519935, 18519988)] 2021-10-25 09:33:35.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032372: ['FBtr0080254'] 2021-10-25 09:33:35.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032372 has a single transcript. 2021-10-25 09:33:35.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039299: ['FBtr0339259'] 2021-10-25 09:33:35.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039299 has a single transcript. 2021-10-25 09:33:35.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032373: ['FBtr0080255', 'FBtr0335471'] 2021-10-25 09:33:35.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039300: ['FBtr0084868', 'FBtr0304693'] 2021-10-25 09:33:35.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1985401, 1985470), (1985719, 1985781), (1985883, 1985945), (1986105, 1987584), (1986105, 1986796)] 2021-10-25 09:33:35.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052761: ['FBtr0070818'] 2021-10-25 09:33:35.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052761 has a single transcript. 2021-10-25 09:33:35.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035936: ['FBtr0076506', 'FBtr0076507', 'FBtr0076508'] 2021-10-25 09:33:35.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260748: ['FBtr0302375', 'FBtr0302376', 'FBtr0302377', 'FBtr0074386', 'FBtr0343201', 'FBtr0346797'] 2021-10-25 09:33:35.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052762: ['FBtr0070791', 'FBtr0345787'] 2021-10-25 09:33:35.319 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11739036, 11741529), (11743729, 11743833), (11744005, 11744067)] 2021-10-25 09:33:35.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.320 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25246381, 25246447), (25246667, 25247432)] 2021-10-25 09:33:35.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001128: ['FBtr0079146', 'FBtr0079147', 'FBtr0079148', 'FBtr0333228', 'FBtr0333229', 'FBtr0333230'] 2021-10-25 09:33:35.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5500520, 5500617), (5501061, 5501132)] 2021-10-25 09:33:35.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.371 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8912596, 8912968), (8912745, 8912968), (8912771, 8912968), (8913052, 8926073), (8926192, 8926695), (8926794, 8928015), (8928144, 8930379), (8930739, 8930799)] 2021-10-25 09:33:35.372 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.372 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032374: ['FBtr0300370', 'FBtr0335472'] 2021-10-25 09:33:35.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266802: ['FBtr0345473'] 2021-10-25 09:33:35.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266802 has a single transcript. 2021-10-25 09:33:35.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039301: ['FBtr0084812', 'FBtr0332158'] 2021-10-25 09:33:35.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266803: ['FBtr0345475'] 2021-10-25 09:33:35.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266803 has a single transcript. 2021-10-25 09:33:35.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266804: ['FBtr0345477'] 2021-10-25 09:33:35.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266804 has a single transcript. 2021-10-25 09:33:35.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266805: ['FBtr0345478'] 2021-10-25 09:33:35.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266805 has a single transcript. 2021-10-25 09:33:35.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027088: ['FBtr0075632', 'FBtr0075633', 'FBtr0333934'] 2021-10-25 09:33:35.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11788590, 11788652), (11788768, 11788833), (11788777, 11788833)] 2021-10-25 09:33:35.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266806: ['FBtr0345497'] 2021-10-25 09:33:35.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266806 has a single transcript. 2021-10-25 09:33:35.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052767: ['FBtr0300994', 'FBtr0300995', 'FBtr0302118', 'FBtr0302119', 'FBtr0331757', 'FBtr0331758'] 2021-10-25 09:33:35.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266807: ['FBtr0345501'] 2021-10-25 09:33:35.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266807 has a single transcript. 2021-10-25 09:33:35.445 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25247777, 25247958), (25248106, 25248172), (25248581, 25248638)] 2021-10-25 09:33:35.446 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.446 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266808: ['FBtr0345480', 'FBtr0345792', 'FBtr0345793'] 2021-10-25 09:33:35.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17108058, 17124902), (17125017, 17126000), (17125539, 17126000), (17125944, 17126000), (17126085, 17126301), (17127901, 17127998), (17128174, 17128237), (17128917, 17129149), (17129285, 17130963), (17130570, 17130963), (17130678, 17130963), (17131159, 17134224), (17133787, 17134224), (17134670, 17134744), (17134877, 17134944)] 2021-10-25 09:33:35.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035941: ['FBtr0076512'] 2021-10-25 09:33:35.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035941 has a single transcript. 2021-10-25 09:33:35.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035942: ['FBtr0076560', 'FBtr0346542'] 2021-10-25 09:33:35.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032375: ['FBtr0300384', 'FBtr0300385'] 2021-10-25 09:33:35.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15095185, 15095254), (15095185, 15095273)] 2021-10-25 09:33:35.503 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15095141, 15097686, 'FBtr0075633_exon_1') contains intron (15095185, 15095254) 2021-10-25 09:33:35.503 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075633_exon_1'] 2021-10-25 09:33:35.503 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039302: ['FBtr0084813', 'FBtr0304692'] 2021-10-25 09:33:35.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:35.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5944153, 5944267), (5944445, 5946043), (5946250, 5946315), (5946688, 5947017), (5947171, 5947239), (5947332, 5948406), (5947332, 5947856)] 2021-10-25 09:33:35.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5947239, 5947872, 'FBtr0079148_exon_6') contains intron (5947332, 5947856) 2021-10-25 09:33:35.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079148_exon_6'] 2021-10-25 09:33:35.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8961456, 8961516), (8962146, 8962205), (8962655, 8962710), (8964464, 8964532)] 2021-10-25 09:33:35.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25249702, 25250222), (25253235, 25253291), (25256293, 25256354), (25256855, 25256924), (25257057, 25257121), (25258129, 25258200)] 2021-10-25 09:33:35.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11790005, 11790058), (11790115, 11790175), (11790214, 11790369), (11790214, 11790271), (11790310, 11790369), (11790426, 11790482)] 2021-10-25 09:33:35.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25256354, 25257057, 'FBtr0304692_exon_4') contains intron (25256855, 25256924) 2021-10-25 09:33:35.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304692_exon_4'] 2021-10-25 09:33:35.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5078026, 5078117), (5078026, 5078120), (5081115, 5081180), (5081257, 5081485), (5082239, 5082416), (5082239, 5083000), (5082239, 5084572), (5082239, 5082521), (5082239, 5082881), (5082239, 5082890)] 2021-10-25 09:33:35.586 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035943: ['FBtr0076559'] 2021-10-25 09:33:35.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035943 has a single transcript. 2021-10-25 09:33:35.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027090: ['FBtr0084866'] 2021-10-25 09:33:35.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027090 has a single transcript. 2021-10-25 09:33:35.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032376: ['FBtr0080265'] 2021-10-25 09:33:35.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032376 has a single transcript. 2021-10-25 09:33:35.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032377: ['FBtr0080264'] 2021-10-25 09:33:35.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032377 has a single transcript. 2021-10-25 09:33:35.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027091: ['FBtr0087234'] 2021-10-25 09:33:35.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027091 has a single transcript. 2021-10-25 09:33:35.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035944: ['FBtr0076513', 'FBtr0076514', 'FBtr0301139', 'FBtr0301140'] 2021-10-25 09:33:35.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039303: ['FBtr0084814', 'FBtr0347395'] 2021-10-25 09:33:35.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032378: ['FBtr0080259', 'FBtr0333425'] 2021-10-25 09:33:35.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027093: ['FBtr0074178'] 2021-10-25 09:33:35.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027093 has a single transcript. 2021-10-25 09:33:35.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266809: ['FBtr0345484'] 2021-10-25 09:33:35.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266809 has a single transcript. 2021-10-25 09:33:35.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027094: ['FBtr0079722', 'FBtr0079721'] 2021-10-25 09:33:35.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266810: ['FBtr0345516'] 2021-10-25 09:33:35.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266810 has a single transcript. 2021-10-25 09:33:35.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266811: ['FBtr0345520'] 2021-10-25 09:33:35.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266811 has a single transcript. 2021-10-25 09:33:35.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266812: ['FBtr0345523'] 2021-10-25 09:33:35.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266812 has a single transcript. 2021-10-25 09:33:35.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25259432, 25259493)] 2021-10-25 09:33:35.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.653 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266813: ['FBtr0345524'] 2021-10-25 09:33:35.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266813 has a single transcript. 2021-10-25 09:33:35.660 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084814': ['FBtr0347395']} 2021-10-25 09:33:35.661 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0347395']] 2021-10-25 09:33:35.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11811499, 11811593), (11812682, 11813724)] 2021-10-25 09:33:35.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266814: ['FBtr0345530'] 2021-10-25 09:33:35.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266814 has a single transcript. 2021-10-25 09:33:35.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8380324, 8380447), (8381452, 8381679)] 2021-10-25 09:33:35.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039304: ['FBtr0084867'] 2021-10-25 09:33:35.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039304 has a single transcript. 2021-10-25 09:33:35.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039305: ['FBtr0084815'] 2021-10-25 09:33:35.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266815: ['FBtr0345531'] 2021-10-25 09:33:35.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039305 has a single transcript. 2021-10-25 09:33:35.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266815 has a single transcript. 2021-10-25 09:33:35.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266816: ['FBtr0345533'] 2021-10-25 09:33:35.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266816 has a single transcript. 2021-10-25 09:33:35.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039306: ['FBtr0084816'] 2021-10-25 09:33:35.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039306 has a single transcript. 2021-10-25 09:33:35.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266817: ['FBtr0345538'] 2021-10-25 09:33:35.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8966983, 8967127), (8966992, 8967127), (8967210, 8967281), (8967516, 8967580), (8967516, 8967565)] 2021-10-25 09:33:35.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266817 has a single transcript. 2021-10-25 09:33:35.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039307: ['FBtr0084817'] 2021-10-25 09:33:35.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039307 has a single transcript. 2021-10-25 09:33:35.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039308: ['FBtr0100614', 'FBtr0344492'] 2021-10-25 09:33:35.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260749: ['FBtr0080075', 'FBtr0080076', 'FBtr0080077', 'FBtr0303903', 'FBtr0333410'] 2021-10-25 09:33:35.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266818: ['FBtr0345539'] 2021-10-25 09:33:35.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266818 has a single transcript. 2021-10-25 09:33:35.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266819: ['FBtr0345573', 'FBtr0345574'] 2021-10-25 09:33:35.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032381: ['FBtr0080275'] 2021-10-25 09:33:35.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032381 has a single transcript. 2021-10-25 09:33:35.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027095: ['FBtr0083283'] 2021-10-25 09:33:35.731 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027095 has a single transcript. 2021-10-25 09:33:35.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032382: ['FBtr0080276', 'FBtr0303220', 'FBtr0303221'] 2021-10-25 09:33:35.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25271287, 25271345), (25272931, 25272988)] 2021-10-25 09:33:35.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027101: ['FBtr0100402', 'FBtr0100404', 'FBtr0100406'] 2021-10-25 09:33:35.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001133: ['FBtr0071548'] 2021-10-25 09:33:35.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001133 has a single transcript. 2021-10-25 09:33:35.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001134: ['FBtr0075139'] 2021-10-25 09:33:35.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001134 has a single transcript. 2021-10-25 09:33:35.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:35.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001137: ['FBtr0079708'] 2021-10-25 09:33:35.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001137 has a single transcript. 2021-10-25 09:33:35.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001138: ['FBtr0081808', 'FBtr0300040', 'FBtr0330188'] 2021-10-25 09:33:35.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039309: ['FBtr0472597', 'FBtr0472598'] 2021-10-25 09:33:35.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10272906, 10272995), (10273122, 10273196), (10273406, 10273462), (10273882, 10273965), (10274090, 10274164), (10274105, 10274164), (10274868, 10274933), (10275066, 10275126), (10275384, 10275448), (10275387, 10275448), (10275629, 10275696), (10275922, 10275983), (10276112, 10276391), (10276567, 10277813), (10276567, 10277394), (10276567, 10277406), (10276567, 10276811), (10277925, 10278249), (10278596, 10278648)] 2021-10-25 09:33:35.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11850048, 11850389), (11851551, 11851617), (11851768, 11851826), (11852022, 11852080), (11852221, 11852377)] 2021-10-25 09:33:35.833 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.833 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1226444, 1226504), (1226846, 1226898), (1227499, 1228652), (1229515, 1229579), (1230118, 1230305), (1230118, 1230446), (1230420, 1230497)] 2021-10-25 09:33:35.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266820: ['FBtr0345546'] 2021-10-25 09:33:35.836 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266820 has a single transcript. 2021-10-25 09:33:35.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266821: ['FBtr0345547', 'FBtr0345548'] 2021-10-25 09:33:35.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052772: ['FBtr0300997', 'FBtr0342951', 'FBtr0342952', 'FBtr0343533'] 2021-10-25 09:33:35.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25271287, 25271345), (25272931, 25272988)] 2021-10-25 09:33:35.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035945: ['FBtr0076515', 'FBtr0076516', 'FBtr0301141'] 2021-10-25 09:33:35.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8148964, 8149269), (8149457, 8149546), (8149733, 8153257), (8153401, 8160962), (8161108, 8166731), (8161108, 8167370), (8167530, 8167830), (8168117, 8179354), (8179850, 8181198)] 2021-10-25 09:33:35.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:35.889 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.893 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0300040': ['FBtr0330188']} 2021-10-25 09:33:35.893 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330188']] 2021-10-25 09:33:35.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039310: ['FBtr0084821'] 2021-10-25 09:33:35.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039310 has a single transcript. 2021-10-25 09:33:35.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032385: ['FBtr0080282', 'FBtr0342579'] 2021-10-25 09:33:35.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039311: ['FBtr0114505'] 2021-10-25 09:33:35.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039311 has a single transcript. 2021-10-25 09:33:35.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4909319, 4909451), (4909797, 4910851), (4911178, 4912742), (4912511, 4912742), (4912875, 4912944), (4913129, 4913203), (4913783, 4913845)] 2021-10-25 09:33:35.937 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4909101, 4909797, 'FBtr0300997_exon_1') contains intron (4909319, 4909451) 2021-10-25 09:33:35.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300997_exon_1'] 2021-10-25 09:33:35.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027106: ['FBtr0071035'] 2021-10-25 09:33:35.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027106 has a single transcript. 2021-10-25 09:33:35.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8969073, 8969176), (8969427, 8969497), (8969885, 8969947), (8970423, 8970482), (8970895, 8970948), (8971046, 8971102)] 2021-10-25 09:33:35.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039312: ['FBtr0084864'] 2021-10-25 09:33:35.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039312 has a single transcript. 2021-10-25 09:33:35.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266822: ['FBtr0345549'] 2021-10-25 09:33:35.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266822 has a single transcript. 2021-10-25 09:33:35.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039313: ['FBtr0089644', 'FBtr0089645'] 2021-10-25 09:33:35.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027107: ['FBtr0077339'] 2021-10-25 09:33:35.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027107 has a single transcript. 2021-10-25 09:33:35.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266823: ['FBtr0345550'] 2021-10-25 09:33:35.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266823 has a single transcript. 2021-10-25 09:33:35.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266824: ['FBtr0345551'] 2021-10-25 09:33:35.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027108: ['FBtr0071005', 'FBtr0071006', 'FBtr0301860', 'FBtr0332314'] 2021-10-25 09:33:35.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266824 has a single transcript. 2021-10-25 09:33:35.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11948034, 11948104)] 2021-10-25 09:33:35.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:35.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:35.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001139: ['FBtr0084962', 'FBtr0084963', 'FBtr0084964', 'FBtr0084965', 'FBtr0084966', 'FBtr0302951', 'FBtr0302952', 'FBtr0305047', 'FBtr0337057', 'FBtr0339900'] 2021-10-25 09:33:35.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266825: ['FBtr0345552'] 2021-10-25 09:33:35.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266825 has a single transcript. 2021-10-25 09:33:35.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266826: ['FBtr0345553'] 2021-10-25 09:33:35.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266826 has a single transcript. 2021-10-25 09:33:35.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266827: ['FBtr0345554', 'FBtr0345555'] 2021-10-25 09:33:36.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25281644, 25281687), (25282825, 25282892)] 2021-10-25 09:33:36.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032387: ['FBtr0310149'] 2021-10-25 09:33:36.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032387 has a single transcript. 2021-10-25 09:33:36.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260750: ['FBtr0079986'] 2021-10-25 09:33:36.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260750 has a single transcript. 2021-10-25 09:33:36.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032388: ['FBtr0089572', 'FBtr0089573', 'FBtr0301171'] 2021-10-25 09:33:36.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:36.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260753: ['FBtr0340084', 'FBtr0340085', 'FBtr0070436', 'FBtr0308565'] 2021-10-25 09:33:36.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035947: ['FBtr0076517'] 2021-10-25 09:33:36.049 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035947 has a single transcript. 2021-10-25 09:33:36.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035948: ['FBtr0076556'] 2021-10-25 09:33:36.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035948 has a single transcript. 2021-10-25 09:33:36.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6998743, 6998957), (7000263, 7002771)] 2021-10-25 09:33:36.060 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6998671, 7000263, 'FBtr0071005_exon_1') contains intron (6998743, 6998957) 2021-10-25 09:33:36.061 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6998671, 7000503, 'FBtr0301860_exon_1') contains intron (6998743, 6998957) 2021-10-25 09:33:36.061 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6998957, 7004151, 'FBtr0332314_exon_2') contains intron (7000263, 7002771) 2021-10-25 09:33:36.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071005_exon_1', 'FBtr0301860_exon_1', 'FBtr0332314_exon_2'] 2021-10-25 09:33:36.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035949: ['FBtr0076518', 'FBtr0303233'] 2021-10-25 09:33:36.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039315: ['FBtr0273361'] 2021-10-25 09:33:36.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039315 has a single transcript. 2021-10-25 09:33:36.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039316: ['FBtr0084827'] 2021-10-25 09:33:36.077 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039316 has a single transcript. 2021-10-25 09:33:36.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039319: ['FBtr0084828'] 2021-10-25 09:33:36.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039319 has a single transcript. 2021-10-25 09:33:36.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052773: ['FBtr0344479', 'FBtr0344480'] 2021-10-25 09:33:36.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039321: ['FBtr0084857', 'FBtr0084858', 'FBtr0305953'] 2021-10-25 09:33:36.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11984662, 11984724), (11984950, 11985006), (11985771, 11985832), (11986380, 11986437), (11987387, 11987695), (11987387, 11987494), (11987387, 11987471), (11987494, 11987695), (11987512, 11987695)] 2021-10-25 09:33:36.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.112 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8981888, 8982713)] 2021-10-25 09:33:36.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266828: ['FBtr0345556'] 2021-10-25 09:33:36.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266828 has a single transcript. 2021-10-25 09:33:36.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266829: ['FBtr0345557'] 2021-10-25 09:33:36.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266829 has a single transcript. 2021-10-25 09:33:36.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266830: ['FBtr0345558'] 2021-10-25 09:33:36.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266830 has a single transcript. 2021-10-25 09:33:36.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2552274, 2554263), (2554417, 2572973), (2572846, 2572973), (2573430, 2573499), (2573610, 2574471), (2574623, 2574862), (2575120, 2575191), (2575488, 2575554), (2575818, 2575893), (2576054, 2576116), (2576384, 2577592)] 2021-10-25 09:33:36.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4388251, 4393324), (4393604, 4459954), (4393604, 4393760), (4460105, 4562604), (4562650, 4610850)] 2021-10-25 09:33:36.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266831: ['FBtr0345559'] 2021-10-25 09:33:36.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266831 has a single transcript. 2021-10-25 09:33:36.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266832: ['FBtr0345562'] 2021-10-25 09:33:36.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266832 has a single transcript. 2021-10-25 09:33:36.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266833: ['FBtr0345561'] 2021-10-25 09:33:36.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266833 has a single transcript. 2021-10-25 09:33:36.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25306701, 25306761), (25307628, 25307688), (25307909, 25308310), (25307909, 25308180), (25307909, 25308314)] 2021-10-25 09:33:36.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266834: ['FBtr0345560'] 2021-10-25 09:33:36.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266834 has a single transcript. 2021-10-25 09:33:36.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035951: ['FBtr0076519', 'FBtr0333907'] 2021-10-25 09:33:36.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266835: ['FBtr0345563'] 2021-10-25 09:33:36.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266835 has a single transcript. 2021-10-25 09:33:36.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266836: ['FBtr0345564'] 2021-10-25 09:33:36.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266836 has a single transcript. 2021-10-25 09:33:36.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266837: ['FBtr0345565'] 2021-10-25 09:33:36.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266837 has a single transcript. 2021-10-25 09:33:36.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052774: ['FBtr0307050', 'FBtr0343573'] 2021-10-25 09:33:36.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266838: ['FBtr0345566'] 2021-10-25 09:33:36.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266838 has a single transcript. 2021-10-25 09:33:36.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26041901, 26042994), (26042184, 26042994), (26042264, 26042994), (26042812, 26042994), (26042903, 26042994), (26043379, 26043514), (26043609, 26044309), (26044373, 26044443), (26044626, 26045003), (26044626, 26045468), (26044626, 26045474), (26045036, 26045468), (26045036, 26045474), (26045663, 26045728), (26045827, 26046535), (26045827, 26046732), (26046592, 26046732), (26046909, 26046973), (26047245, 26047495), (26048169, 26048235), (26048435, 26048497)] 2021-10-25 09:33:36.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027109: ['FBtr0083328', 'FBtr0331685', 'FBtr0331686'] 2021-10-25 09:33:36.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8986958, 8987026), (8987225, 8987284), (8987394, 8987731), (8988043, 8988098), (8988323, 8988385)] 2021-10-25 09:33:36.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266839: ['FBtr0345567'] 2021-10-25 09:33:36.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266839 has a single transcript. 2021-10-25 09:33:36.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266840: ['FBtr0345568'] 2021-10-25 09:33:36.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266840 has a single transcript. 2021-10-25 09:33:36.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032390: ['FBtr0080285', 'FBtr0342580'] 2021-10-25 09:33:36.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266841: ['FBtr0345569'] 2021-10-25 09:33:36.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266841 has a single transcript. 2021-10-25 09:33:36.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266842: ['FBtr0345570'] 2021-10-25 09:33:36.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266842 has a single transcript. 2021-10-25 09:33:36.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4245659, 4245717)] 2021-10-25 09:33:36.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.245 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266843: ['FBtr0345571'] 2021-10-25 09:33:36.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266843 has a single transcript. 2021-10-25 09:33:36.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266844: ['FBtr0345572'] 2021-10-25 09:33:36.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266844 has a single transcript. 2021-10-25 09:33:36.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039323: ['FBtr0289942'] 2021-10-25 09:33:36.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039323 has a single transcript. 2021-10-25 09:33:36.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266845: ['FBtr0345576'] 2021-10-25 09:33:36.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266845 has a single transcript. 2021-10-25 09:33:36.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039324: ['FBtr0084853'] 2021-10-25 09:33:36.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039324 has a single transcript. 2021-10-25 09:33:36.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035952: ['FBtr0076552'] 2021-10-25 09:33:36.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035952 has a single transcript. 2021-10-25 09:33:36.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11990255, 11990312)] 2021-10-25 09:33:36.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266846: ['FBtr0345579'] 2021-10-25 09:33:36.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039325: ['FBtr0084852'] 2021-10-25 09:33:36.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266846 has a single transcript. 2021-10-25 09:33:36.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039325 has a single transcript. 2021-10-25 09:33:36.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035953: ['FBtr0076520', 'FBtr0333908'] 2021-10-25 09:33:36.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039326: ['FBtr0084851'] 2021-10-25 09:33:36.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266847: ['FBtr0345583'] 2021-10-25 09:33:36.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039326 has a single transcript. 2021-10-25 09:33:36.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266847 has a single transcript. 2021-10-25 09:33:36.283 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16609239, 16610774), (16609828, 16610764), (16609828, 16610774), (16611054, 16611107)] 2021-10-25 09:33:36.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260755: ['FBtr0301252'] 2021-10-25 09:33:36.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260755 has a single transcript. 2021-10-25 09:33:36.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039328: ['FBtr0084849'] 2021-10-25 09:33:36.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039328 has a single transcript. 2021-10-25 09:33:36.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260756: ['FBtr0301253'] 2021-10-25 09:33:36.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260756 has a single transcript. 2021-10-25 09:33:36.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039329: ['FBtr0084848', 'FBtr0300687'] 2021-10-25 09:33:36.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266848: ['FBtr0077368', 'FBtr0305147', 'FBtr0309240', 'FBtr0339498'] 2021-10-25 09:33:36.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260758: ['FBtr0301255'] 2021-10-25 09:33:36.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260758 has a single transcript. 2021-10-25 09:33:36.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052783: ['FBtr0344826'] 2021-10-25 09:33:36.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052783 has a single transcript. 2021-10-25 09:33:36.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260759: ['FBtr0301256'] 2021-10-25 09:33:36.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260759 has a single transcript. 2021-10-25 09:33:36.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052785: ['FBtr0070603'] 2021-10-25 09:33:36.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052785 has a single transcript. 2021-10-25 09:33:36.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8998609, 8998662), (8999152, 8999215), (8999596, 8999652), (9000278, 9000338), (9000457, 9000605), (9000457, 9000602), (9001783, 9001844)] 2021-10-25 09:33:36.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.321 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260760: ['FBtr0301257'] 2021-10-25 09:33:36.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260760 has a single transcript. 2021-10-25 09:33:36.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052786: ['FBtr0344825'] 2021-10-25 09:33:36.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052786 has a single transcript. 2021-10-25 09:33:36.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032391: ['FBtr0080286', 'FBtr0342581'] 2021-10-25 09:33:36.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052791: ['FBtr0070588', 'FBtr0333794', 'FBtr0333795'] 2021-10-25 09:33:36.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260761: ['FBtr0301258', 'FBtr0301259', 'FBtr0301260'] 2021-10-25 09:33:36.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25332308, 25332373), (25332922, 25333123), (25333973, 25334146), (25334392, 25334447), (25334950, 25335027)] 2021-10-25 09:33:36.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11991271, 11991329), (11991519, 11991574)] 2021-10-25 09:33:36.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035954: ['FBtr0076521'] 2021-10-25 09:33:36.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035954 has a single transcript. 2021-10-25 09:33:36.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027111: ['FBtr0072504', 'FBtr0072505', 'FBtr0310416'] 2021-10-25 09:33:36.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035955: ['FBtr0076548', 'FBtr0333909'] 2021-10-25 09:33:36.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3513652, 3514001), (3514172, 3514867), (3514987, 3519824), (3519953, 3520041), (3520133, 3522211), (3522312, 3523633), (3523819, 3523921), (3524031, 3530314), (3524031, 3541867), (3542052, 3568303), (3569275, 3571491)] 2021-10-25 09:33:36.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22453428, 22453490), (22453672, 22453730), (22454190, 22454393), (22454586, 22454661), (22455059, 22455273), (22455087, 22455273), (22455204, 22455273)] 2021-10-25 09:33:36.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22454661, 22455422, 'FBtr0077368_exon_1') contains intron (22455059, 22455273) 2021-10-25 09:33:36.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077368_exon_1'] 2021-10-25 09:33:36.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039331: ['FBtr0273265'] 2021-10-25 09:33:36.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039331 has a single transcript. 2021-10-25 09:33:36.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23599694, 23599756), (23599820, 23599879), (23599956, 23600046), (23600255, 23600313), (23600380, 23600438), (23600549, 23600604)] 2021-10-25 09:33:36.401 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23599756, 23599956, 'FBtr0301259_exon_5') contains intron (23599820, 23599879) 2021-10-25 09:33:36.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23599525, 23599820, 'FBtr0301260_exon_6') contains intron (23599694, 23599756) 2021-10-25 09:33:36.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301259_exon_5', 'FBtr0301260_exon_6'] 2021-10-25 09:33:36.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039332: ['FBtr0084846'] 2021-10-25 09:33:36.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039332 has a single transcript. 2021-10-25 09:33:36.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039335: ['FBtr0084835'] 2021-10-25 09:33:36.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039335 has a single transcript. 2021-10-25 09:33:36.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039336: ['FBtr0084839'] 2021-10-25 09:33:36.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039336 has a single transcript. 2021-10-25 09:33:36.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9008981, 9009031), (9009511, 9009581), (9009529, 9009581)] 2021-10-25 09:33:36.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039337: ['FBtr0084836'] 2021-10-25 09:33:36.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039337 has a single transcript. 2021-10-25 09:33:36.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032393: ['FBtr0080290'] 2021-10-25 09:33:36.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032393 has a single transcript. 2021-10-25 09:33:36.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039338: ['FBtr0084837', 'FBtr0084838', 'FBtr0344718', 'FBtr0344719'] 2021-10-25 09:33:36.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032394: ['FBtr0080313'] 2021-10-25 09:33:36.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032394 has a single transcript. 2021-10-25 09:33:36.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032395: ['FBtr0080312'] 2021-10-25 09:33:36.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032395 has a single transcript. 2021-10-25 09:33:36.458 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(267391, 268219), (267853, 268219), (267869, 268219), (268459, 268562), (268700, 268780), (268960, 269096)] 2021-10-25 09:33:36.459 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.459 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032397: ['FBtr0080309', 'FBtr0080310', 'FBtr0080311'] 2021-10-25 09:33:36.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035956: ['FBtr0076547'] 2021-10-25 09:33:36.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035956 has a single transcript. 2021-10-25 09:33:36.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035957: ['FBtr0076523'] 2021-10-25 09:33:36.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035957 has a single transcript. 2021-10-25 09:33:36.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052792: ['FBtr0307179', 'FBtr0307180'] 2021-10-25 09:33:36.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260762: ['FBtr0301262', 'FBtr0301263'] 2021-10-25 09:33:36.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035959: ['FBtr0076542', 'FBtr0331549', 'FBtr0345351'] 2021-10-25 09:33:36.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12037064, 12037154), (12038170, 12038292), (12038170, 12038371)] 2021-10-25 09:33:36.525 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12037154, 12038310, 'FBtr0080310_exon_1') contains intron (12038170, 12038292) 2021-10-25 09:33:36.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080310_exon_1'] 2021-10-25 09:33:36.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.534 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25479349, 25479405), (25480287, 25480385), (25482383, 25482703)] 2021-10-25 09:33:36.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.544 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23599694, 23599756), (23599820, 23599879), (23599956, 23600046), (23600255, 23600313), (23600380, 23600438), (23600549, 23600604)] 2021-10-25 09:33:36.545 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23599879, 23600056, 'FBtr0301263_exon_1') contains intron (23599956, 23600046) 2021-10-25 09:33:36.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266849: ['FBtr0345624'] 2021-10-25 09:33:36.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301263_exon_1'] 2021-10-25 09:33:36.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3557838, 3559143), (3559277, 3569812), (3569694, 3569754), (3570058, 3570231), (3570380, 3570665), (3571474, 3571543)] 2021-10-25 09:33:36.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266849 has a single transcript. 2021-10-25 09:33:36.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.549 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084837': ['FBtr0344718'], 'FBtr0084838': ['FBtr0344719']} 2021-10-25 09:33:36.549 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344718'], ['FBtr0344719']] 2021-10-25 09:33:36.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266850: ['FBtr0345625'] 2021-10-25 09:33:36.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266850 has a single transcript. 2021-10-25 09:33:36.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027259: ['FBtr0073541', 'FBtr0433505'] 2021-10-25 09:33:36.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266851: ['FBtr0345626'] 2021-10-25 09:33:36.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266851 has a single transcript. 2021-10-25 09:33:36.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266852: ['FBtr0345643'] 2021-10-25 09:33:36.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266852 has a single transcript. 2021-10-25 09:33:36.574 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9070644, 9070704), (9070647, 9070704), (9071521, 9071582), (9071687, 9071745), (9071901, 9072487)] 2021-10-25 09:33:36.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.576 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266853: ['FBtr0345645'] 2021-10-25 09:33:36.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266853 has a single transcript. 2021-10-25 09:33:36.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266854: ['FBtr0345654'] 2021-10-25 09:33:36.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266854 has a single transcript. 2021-10-25 09:33:36.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266855: ['FBtr0345655'] 2021-10-25 09:33:36.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266855 has a single transcript. 2021-10-25 09:33:36.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039339: ['FBtr0084877', 'FBtr0343172'] 2021-10-25 09:33:36.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11572132, 11572190)] 2021-10-25 09:33:36.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260763: ['FBtr0301265'] 2021-10-25 09:33:36.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266856: ['FBtr0345657'] 2021-10-25 09:33:36.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260763 has a single transcript. 2021-10-25 09:33:36.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266856 has a single transcript. 2021-10-25 09:33:36.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052793: ['FBtr0070550'] 2021-10-25 09:33:36.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052793 has a single transcript. 2021-10-25 09:33:36.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266857: ['FBtr0345658'] 2021-10-25 09:33:36.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266857 has a single transcript. 2021-10-25 09:33:36.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260764: ['FBtr0301266'] 2021-10-25 09:33:36.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260764 has a single transcript. 2021-10-25 09:33:36.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052797: ['FBtr0070461'] 2021-10-25 09:33:36.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052797 has a single transcript. 2021-10-25 09:33:36.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001142: ['FBtr0078115', 'FBtr0078114', 'FBtr0300568'] 2021-10-25 09:33:36.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260766: ['FBtr0301268'] 2021-10-25 09:33:36.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260766 has a single transcript. 2021-10-25 09:33:36.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266858: ['FBtr0345659', 'FBtr0345660'] 2021-10-25 09:33:36.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260767: ['FBtr0301269', 'FBtr0345499'] 2021-10-25 09:33:36.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052801: ['FBtr0070355'] 2021-10-25 09:33:36.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032398: ['FBtr0080308'] 2021-10-25 09:33:36.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052801 has a single transcript. 2021-10-25 09:33:36.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032398 has a single transcript. 2021-10-25 09:33:36.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052803: ['FBtr0332581', 'FBtr0332582', 'FBtr0070356'] 2021-10-25 09:33:36.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032399: ['FBtr0080307', 'FBtr0342595', 'FBtr0342596'] 2021-10-25 09:33:36.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25483280, 25483335), (25483797, 25483851), (25484302, 25484360), (25484801, 25484860)] 2021-10-25 09:33:36.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22658275, 22658922), (22659977, 22660035), (22660861, 22661068)] 2021-10-25 09:33:36.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:36.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035960: ['FBtr0076524'] 2021-10-25 09:33:36.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035960 has a single transcript. 2021-10-25 09:33:36.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035964: ['FBtr0100532', 'FBtr0076531', 'FBtr0100531'] 2021-10-25 09:33:36.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027279: ['FBtr0299522', 'FBtr0299523', 'FBtr0299524', 'FBtr0299525', 'FBtr0299526', 'FBtr0343579', 'FBtr0343580', 'FBtr0343581', 'FBtr0343582', 'FBtr0343583'] 2021-10-25 09:33:36.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(132255, 132475)] 2021-10-25 09:33:36.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (132076, 134472, 'FBtr0078115_exon_1') contains intron (132255, 132475) 2021-10-25 09:33:36.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078115_exon_1'] 2021-10-25 09:33:36.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039341: ['FBtr0084878'] 2021-10-25 09:33:36.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039341 has a single transcript. 2021-10-25 09:33:36.712 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1901013, 1901082), (1901013, 1901064), (1901277, 1901436), (1901614, 1901712), (1901614, 1901799)] 2021-10-25 09:33:36.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12041438, 12041513), (12042234, 12042326), (12043581, 12044099)] 2021-10-25 09:33:36.715 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12042326, 12045200, 'FBtr0080307_exon_1') contains intron (12043581, 12044099) 2021-10-25 09:33:36.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080307_exon_1'] 2021-10-25 09:33:36.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039342: ['FBtr0084879'] 2021-10-25 09:33:36.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039342 has a single transcript. 2021-10-25 09:33:36.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260768: ['FBtr0344753', 'FBtr0301270'] 2021-10-25 09:33:36.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266859: ['FBtr0345668'] 2021-10-25 09:33:36.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266859 has a single transcript. 2021-10-25 09:33:36.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039343: ['FBtr0084880'] 2021-10-25 09:33:36.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039343 has a single transcript. 2021-10-25 09:33:36.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266860: ['FBtr0345669'] 2021-10-25 09:33:36.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266860 has a single transcript. 2021-10-25 09:33:36.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039344: ['FBtr0084896'] 2021-10-25 09:33:36.738 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039344 has a single transcript. 2021-10-25 09:33:36.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266861: ['FBtr0345670'] 2021-10-25 09:33:36.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266861 has a single transcript. 2021-10-25 09:33:36.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039346: ['FBtr0084883'] 2021-10-25 09:33:36.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039346 has a single transcript. 2021-10-25 09:33:36.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039347: ['FBtr0084884', 'FBtr0084885', 'FBtr0304805', 'FBtr0392910'] 2021-10-25 09:33:36.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266862: ['FBtr0345671'] 2021-10-25 09:33:36.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266862 has a single transcript. 2021-10-25 09:33:36.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9134890, 9134986)] 2021-10-25 09:33:36.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22662036, 22662719), (22662036, 22662344), (22662662, 22662719), (22662863, 22662933)] 2021-10-25 09:33:36.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266863: ['FBtr0345681'] 2021-10-25 09:33:36.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266863 has a single transcript. 2021-10-25 09:33:36.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266864: ['FBtr0345698'] 2021-10-25 09:33:36.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266864 has a single transcript. 2021-10-25 09:33:36.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266865: ['FBtr0345699'] 2021-10-25 09:33:36.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266865 has a single transcript. 2021-10-25 09:33:36.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266866: ['FBtr0345700'] 2021-10-25 09:33:36.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266866 has a single transcript. 2021-10-25 09:33:36.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001145: ['FBtr0073494', 'FBtr0073495', 'FBtr0073496', 'FBtr0343561', 'FBtr0343562', 'FBtr0343563'] 2021-10-25 09:33:36.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266867: ['FBtr0345701'] 2021-10-25 09:33:36.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266867 has a single transcript. 2021-10-25 09:33:36.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032400: ['FBtr0080306'] 2021-10-25 09:33:36.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032400 has a single transcript. 2021-10-25 09:33:36.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052806: ['FBtr0070301'] 2021-10-25 09:33:36.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052806 has a single transcript. 2021-10-25 09:33:36.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266868: ['FBtr0345702'] 2021-10-25 09:33:36.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266868 has a single transcript. 2021-10-25 09:33:36.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032401: ['FBtr0080305', 'FBtr0342594'] 2021-10-25 09:33:36.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052808: ['FBtr0070295'] 2021-10-25 09:33:36.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052808 has a single transcript. 2021-10-25 09:33:36.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266869: ['FBtr0345722', 'FBtr0345723'] 2021-10-25 09:33:36.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260770: ['FBtr0301273', 'FBtr0301274'] 2021-10-25 09:33:36.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052811: ['FBtr0302877'] 2021-10-25 09:33:36.836 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052811 has a single transcript. 2021-10-25 09:33:36.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25619981, 25620045), (25619981, 25620048)] 2021-10-25 09:33:36.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25618413, 25620679, 'FBtr0084884_exon_1') contains intron (25619981, 25620045) 2021-10-25 09:33:36.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25618413, 25621838, 'FBtr0392910_exon_1') contains intron (25619981, 25620045) 2021-10-25 09:33:36.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084884_exon_1', 'FBtr0392910_exon_1'] 2021-10-25 09:33:36.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052813: ['FBtr0070219', 'FBtr0070222', 'FBtr0342735', 'FBtr0342736', 'FBtr0342737', 'FBtr0330317', 'FBtr0330318', 'FBtr0330319', 'FBtr0330320'] 2021-10-25 09:33:36.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12048292, 12048348)] 2021-10-25 09:33:36.868 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24158530, 24158591), (24158920, 24158973), (24159085, 24159144), (24159085, 24159148)] 2021-10-25 09:33:36.872 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035965: ['FBtr0076537'] 2021-10-25 09:33:36.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035965 has a single transcript. 2021-10-25 09:33:36.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13242014, 13244342), (13242014, 13244584)] 2021-10-25 09:33:36.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035968: ['FBtr0076503', 'FBtr0332124', 'FBtr0332125', 'FBtr0332126'] 2021-10-25 09:33:36.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22487789, 22493480), (22492421, 22493480), (22493913, 22494032), (22494275, 22495478), (22494275, 22495490), (22495977, 22496041), (22496313, 22496367), (22496313, 22496376), (22496313, 22496379), (22496548, 22496663), (22496861, 22497226), (22498247, 22498306), (22498619, 22502194), (22498619, 22503368), (22498619, 22500994), (22498619, 22500997), (22498619, 22502635), (22498619, 22498732), (22501521, 22501671), (22502305, 22502635), (22502869, 22503368), (22503740, 22504228), (22503740, 22505033), (22505106, 22505156), (22505376, 22505604), (22506181, 22507107)] 2021-10-25 09:33:36.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032402: ['FBtr0080294', 'FBtr0080295'] 2021-10-25 09:33:36.926 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22502194, 22502869, 'FBtr0299525_exon_10') contains intron (22502305, 22502635) 2021-10-25 09:33:36.926 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22500997, 22502869, 'FBtr0299526_exon_10') contains intron (22501521, 22501671) 2021-10-25 09:33:36.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299525_exon_10', 'FBtr0299526_exon_10'] 2021-10-25 09:33:36.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260771: ['FBtr0301275'] 2021-10-25 09:33:36.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260771 has a single transcript. 2021-10-25 09:33:36.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266870: ['FBtr0345724'] 2021-10-25 09:33:36.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266870 has a single transcript. 2021-10-25 09:33:36.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266871: ['FBtr0345726'] 2021-10-25 09:33:36.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266871 has a single transcript. 2021-10-25 09:33:36.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260775: ['FBtr0301271', 'FBtr0301272'] 2021-10-25 09:33:36.950 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11423072, 11424269), (11423072, 11424281), (11424103, 11424264), (11424103, 11424269), (11424103, 11424281), (11424454, 11428528), (11428869, 11428981), (11429173, 11429238)] 2021-10-25 09:33:36.951 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11423956, 11424454, 'FBtr0343563_exon_1') contains intron (11424103, 11424264) 2021-10-25 09:33:36.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343563_exon_1'] 2021-10-25 09:33:36.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266872: ['FBtr0345725'] 2021-10-25 09:33:36.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266872 has a single transcript. 2021-10-25 09:33:36.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266873: ['FBtr0345727'] 2021-10-25 09:33:36.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266873 has a single transcript. 2021-10-25 09:33:36.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266874: ['FBtr0345728'] 2021-10-25 09:33:36.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266874 has a single transcript. 2021-10-25 09:33:36.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9203537, 9203597), (9203772, 9204097), (9205519, 9207972), (9205519, 9207824), (9205519, 9206305), (9207880, 9207972)] 2021-10-25 09:33:36.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12051032, 12051107), (12051381, 12051452)] 2021-10-25 09:33:36.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266875: ['FBtr0345729'] 2021-10-25 09:33:36.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266875 has a single transcript. 2021-10-25 09:33:36.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266876: ['FBtr0345731'] 2021-10-25 09:33:36.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266876 has a single transcript. 2021-10-25 09:33:36.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24158530, 24158591), (24158920, 24158973), (24159085, 24159144)] 2021-10-25 09:33:36.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266877: ['FBtr0345730'] 2021-10-25 09:33:36.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:36.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:36.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266877 has a single transcript. 2021-10-25 09:33:37.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039348: ['FBtr0084892', 'FBtr0084893', 'FBtr0300730'] 2021-10-25 09:33:37.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266878: ['FBtr0345732'] 2021-10-25 09:33:37.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266878 has a single transcript. 2021-10-25 09:33:37.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266879: ['FBtr0345733'] 2021-10-25 09:33:37.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266879 has a single transcript. 2021-10-25 09:33:37.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266880: ['FBtr0345735'] 2021-10-25 09:33:37.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266880 has a single transcript. 2021-10-25 09:33:37.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266881: ['FBtr0345736'] 2021-10-25 09:33:37.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266881 has a single transcript. 2021-10-25 09:33:37.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032404: ['FBtr0080296', 'FBtr0113037', 'FBtr0346426'] 2021-10-25 09:33:37.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266882: ['FBtr0345737'] 2021-10-25 09:33:37.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266882 has a single transcript. 2021-10-25 09:33:37.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266883: ['FBtr0345740'] 2021-10-25 09:33:37.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266883 has a single transcript. 2021-10-25 09:33:37.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1381126, 1385903), (1384625, 1385903), (1386362, 1386522), (1386362, 1389600), (1386916, 1389600), (1388796, 1388896), (1388796, 1389600), (1389080, 1389600), (1390057, 1390248), (1390057, 1390275)] 2021-10-25 09:33:37.055 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1388567, 1390057, 'FBtr0330320_exon_1') contains intron (1388796, 1388896) 2021-10-25 09:33:37.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330320_exon_1'] 2021-10-25 09:33:37.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260776: ['FBtr0301333', 'FBtr0332689'] 2021-10-25 09:33:37.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266884: ['FBtr0445831'] 2021-10-25 09:33:37.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266884 has a single transcript. 2021-10-25 09:33:37.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266885: ['FBtr0345742'] 2021-10-25 09:33:37.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266885 has a single transcript. 2021-10-25 09:33:37.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266886: ['FBtr0345743'] 2021-10-25 09:33:37.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266886 has a single transcript. 2021-10-25 09:33:37.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25611449, 25611521), (25611937, 25621879), (25622040, 25622102), (25622301, 25622361), (25622890, 25622951), (25623109, 25623171), (25623405, 25624588), (25623405, 25623477)] 2021-10-25 09:33:37.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266887: ['FBtr0345739'] 2021-10-25 09:33:37.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266887 has a single transcript. 2021-10-25 09:33:37.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266888: ['FBtr0345744'] 2021-10-25 09:33:37.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266888 has a single transcript. 2021-10-25 09:33:37.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12056432, 12056498), (12057147, 12057214)] 2021-10-25 09:33:37.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15718047, 15718097), (15718242, 15718303), (15718435, 15718494), (15718650, 15718702), (15718934, 15718993), (15718937, 15718993)] 2021-10-25 09:33:37.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266889: ['FBtr0345790'] 2021-10-25 09:33:37.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266889 has a single transcript. 2021-10-25 09:33:37.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266891: ['FBtr0345756'] 2021-10-25 09:33:37.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266891 has a single transcript. 2021-10-25 09:33:37.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035969: ['FBtr0076429'] 2021-10-25 09:33:37.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035969 has a single transcript. 2021-10-25 09:33:37.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266892: ['FBtr0345759'] 2021-10-25 09:33:37.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266892 has a single transcript. 2021-10-25 09:33:37.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266893: ['FBtr0345760'] 2021-10-25 09:33:37.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035970: ['FBtr0076502'] 2021-10-25 09:33:37.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266893 has a single transcript. 2021-10-25 09:33:37.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035970 has a single transcript. 2021-10-25 09:33:37.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266894: ['FBtr0345762'] 2021-10-25 09:33:37.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266894 has a single transcript. 2021-10-25 09:33:37.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035971: ['FBtr0076430'] 2021-10-25 09:33:37.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035971 has a single transcript. 2021-10-25 09:33:37.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266895: ['FBtr0345761'] 2021-10-25 09:33:37.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266895 has a single transcript. 2021-10-25 09:33:37.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266896: ['FBtr0345763'] 2021-10-25 09:33:37.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266896 has a single transcript. 2021-10-25 09:33:37.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260777: ['FBtr0331799'] 2021-10-25 09:33:37.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260777 has a single transcript. 2021-10-25 09:33:37.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035975: ['FBtr0076432', 'FBtr0076433', 'FBtr0076434', 'FBtr0076435', 'FBtr0333882'] 2021-10-25 09:33:37.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266897: ['FBtr0345764'] 2021-10-25 09:33:37.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266897 has a single transcript. 2021-10-25 09:33:37.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260779: ['FBtr0083718'] 2021-10-25 09:33:37.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260779 has a single transcript. 2021-10-25 09:33:37.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266898: ['FBtr0345765'] 2021-10-25 09:33:37.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266898 has a single transcript. 2021-10-25 09:33:37.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260780: ['FBtr0073573', 'FBtr0342742', 'FBtr0342743'] 2021-10-25 09:33:37.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266899: ['FBtr0345768'] 2021-10-25 09:33:37.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266899 has a single transcript. 2021-10-25 09:33:37.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039349: ['FBtr0084891', 'FBtr0100569', 'FBtr0100570', 'FBtr0100571', 'FBtr0300728'] 2021-10-25 09:33:37.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001147: ['FBtr0072461'] 2021-10-25 09:33:37.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001147 has a single transcript. 2021-10-25 09:33:37.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266900: ['FBtr0345767'] 2021-10-25 09:33:37.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266900 has a single transcript. 2021-10-25 09:33:37.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032405: ['FBtr0305265', 'FBtr0302029', 'FBtr0342607'] 2021-10-25 09:33:37.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266901: ['FBtr0345766', 'FBtr0346909'] 2021-10-25 09:33:37.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001148: ['FBtr0072444'] 2021-10-25 09:33:37.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001148 has a single transcript. 2021-10-25 09:33:37.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001149: ['FBtr0082607', 'FBtr0100410'] 2021-10-25 09:33:37.242 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:37.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11894190, 11894262), (11894551, 11894744), (11895819, 11895876), (11895819, 11895879), (11897363, 11897431), (11897900, 11897953), (11898167, 11898223), (11898367, 11898655), (11898965, 11899029)] 2021-10-25 09:33:37.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11894262, 11895819, 'FBtr0342743_exon_2') contains intron (11894551, 11894744) 2021-10-25 09:33:37.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342743_exon_2'] 2021-10-25 09:33:37.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12063870, 12063928), (12064289, 12064349), (12064504, 12064565), (12064719, 12065269), (12065393, 12066668), (12065393, 12066442), (12066513, 12066668)] 2021-10-25 09:33:37.254 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12065269, 12066775, 'FBtr0302029_exon_1') contains intron (12065393, 12066668) 2021-10-25 09:33:37.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302029_exon_1'] 2021-10-25 09:33:37.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12368575, 12369202), (12368593, 12369202)] 2021-10-25 09:33:37.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9334435, 9334609), (9334927, 9336711), (9335757, 9336711), (9336383, 9336711), (9336933, 9336985), (9336933, 9336997), (9337221, 9337453), (9337660, 9337725)] 2021-10-25 09:33:37.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266902: ['FBtr0345769'] 2021-10-25 09:33:37.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266902 has a single transcript. 2021-10-25 09:33:37.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25626167, 25626343), (25626645, 25626742), (25626645, 25626731), (25626648, 25626731), (25626663, 25626742), (25626663, 25626731)] 2021-10-25 09:33:37.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266903: ['FBtr0345770', 'FBtr0445833'] 2021-10-25 09:33:37.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001150: ['FBtr0070460'] 2021-10-25 09:33:37.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001150 has a single transcript. 2021-10-25 09:33:37.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001168: ['FBtr0076569', 'FBtr0100153'] 2021-10-25 09:33:37.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027280: ['FBtr0071129', 'FBtr0071130'] 2021-10-25 09:33:37.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032406: ['FBtr0080297'] 2021-10-25 09:33:37.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032406 has a single transcript. 2021-10-25 09:33:37.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260789: ['FBtr0071332', 'FBtr0343367'] 2021-10-25 09:33:37.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4362988, 4363528), (4364235, 4371013)] 2021-10-25 09:33:37.358 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4361688, 4364235, 'FBtr0445833_exon_2') contains intron (4362988, 4363528) 2021-10-25 09:33:37.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445833_exon_2'] 2021-10-25 09:33:37.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032407: ['FBtr0080326', 'FBtr0342602'] 2021-10-25 09:33:37.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8676348, 8677371), (8677467, 8677604)] 2021-10-25 09:33:37.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.374 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7941998, 7942057), (7942444, 7942508), (7943227, 7943683), (7943227, 7945895), (7943848, 7943918), (7946219, 7946406)] 2021-10-25 09:33:37.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9237414, 9237488), (9238191, 9238253), (9242220, 9242324), (9242625, 9242694), (9242869, 9242932), (9243100, 9243158)] 2021-10-25 09:33:37.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052814: ['FBtr0336688'] 2021-10-25 09:33:37.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052814 has a single transcript. 2021-10-25 09:33:37.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12092126, 12093687), (12093910, 12093993), (12094111, 12094177), (12094481, 12094547), (12094711, 12094768)] 2021-10-25 09:33:37.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052815: ['FBtr0307181', 'FBtr0345512'] 2021-10-25 09:33:37.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266904: ['FBtr0345771'] 2021-10-25 09:33:37.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266904 has a single transcript. 2021-10-25 09:33:37.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266905: ['FBtr0345772'] 2021-10-25 09:33:37.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266905 has a single transcript. 2021-10-25 09:33:37.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027287: ['FBtr0074042', 'FBtr0074043', 'FBtr0343525'] 2021-10-25 09:33:37.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001169: ['FBtr0083914', 'FBtr0083915', 'FBtr0083916', 'FBtr0083917'] 2021-10-25 09:33:37.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266906: ['FBtr0345775'] 2021-10-25 09:33:37.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266906 has a single transcript. 2021-10-25 09:33:37.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266907: ['FBtr0345774'] 2021-10-25 09:33:37.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266907 has a single transcript. 2021-10-25 09:33:37.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266908: ['FBtr0345776'] 2021-10-25 09:33:37.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266908 has a single transcript. 2021-10-25 09:33:37.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266909: ['FBtr0345777'] 2021-10-25 09:33:37.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266909 has a single transcript. 2021-10-25 09:33:37.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260793: ['FBtr0301436', 'FBtr0330143', 'FBtr0344729', 'FBtr0344730'] 2021-10-25 09:33:37.467 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(933330, 933424), (934474, 934540), (934681, 937940)] 2021-10-25 09:33:37.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035976: ['FBtr0472540', 'FBtr0472541', 'FBtr0089490', 'FBtr0089492', 'FBtr0089491', 'FBtr0300290', 'FBtr0300291', 'FBtr0301773', 'FBtr0308349', 'FBtr0346814'] 2021-10-25 09:33:37.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266910: ['FBtr0345778'] 2021-10-25 09:33:37.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266910 has a single transcript. 2021-10-25 09:33:37.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032408: ['FBtr0080364'] 2021-10-25 09:33:37.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032408 has a single transcript. 2021-10-25 09:33:37.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266911: ['FBtr0345780'] 2021-10-25 09:33:37.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266911 has a single transcript. 2021-10-25 09:33:37.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032409: ['FBtr0080330'] 2021-10-25 09:33:37.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032409 has a single transcript. 2021-10-25 09:33:37.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266912: ['FBtr0345781'] 2021-10-25 09:33:37.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266912 has a single transcript. 2021-10-25 09:33:37.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032414: ['FBtr0080336'] 2021-10-25 09:33:37.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032414 has a single transcript. 2021-10-25 09:33:37.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266913: ['FBtr0345784'] 2021-10-25 09:33:37.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266913 has a single transcript. 2021-10-25 09:33:37.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032415: ['FBtr0080360', 'FBtr0342604'] 2021-10-25 09:33:37.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15487475, 15487540), (15487633, 15503582), (15490195, 15503582), (15499462, 15503582), (15506461, 15507161), (15507325, 15507389), (15507593, 15509717), (15509993, 15510054)] 2021-10-25 09:33:37.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266914: ['FBtr0345783'] 2021-10-25 09:33:37.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266914 has a single transcript. 2021-10-25 09:33:37.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266915: ['FBtr0345773'] 2021-10-25 09:33:37.573 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266915 has a single transcript. 2021-10-25 09:33:37.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039350: ['FBtr0084886', 'FBtr0084887', 'FBtr0084888', 'FBtr0084889', 'FBtr0113287', 'FBtr0113288', 'FBtr0336450', 'FBtr0445401'] 2021-10-25 09:33:37.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266916: ['FBtr0089973', 'FBtr0339328'] 2021-10-25 09:33:37.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052816: ['FBtr0070101', 'FBtr0070102', 'FBtr0273442', 'FBtr0273443', 'FBtr0344150', 'FBtr0344151'] 2021-10-25 09:33:37.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20622127, 20622583), (20622498, 20622583), (20623298, 20623370), (20623544, 20624130), (20624891, 20625041), (20626593, 20626759)] 2021-10-25 09:33:37.591 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20621937, 20623298, 'FBtr0083917_exon_1') contains intron (20622127, 20622583) 2021-10-25 09:33:37.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083917_exon_1'] 2021-10-25 09:33:37.592 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.610 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12130817, 12130885), (12131055, 12131291), (12131065, 12131291), (12131435, 12133093)] 2021-10-25 09:33:37.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.625 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13128567, 13131366), (13133093, 13154367), (13154749, 13155508)] 2021-10-25 09:33:37.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8564256, 8564328), (8564836, 8564897), (8566232, 8566331), (8566232, 8566295), (8567730, 8567799), (8568438, 8568509), (8568652, 8568718), (8568827, 8568887)] 2021-10-25 09:33:37.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.640 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0301436': ['FBtr0330143']} 2021-10-25 09:33:37.640 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330143']] 2021-10-25 09:33:37.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027291: ['FBtr0074780', 'FBtr0336668', 'FBtr0307904'] 2021-10-25 09:33:37.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032416: ['FBtr0080337'] 2021-10-25 09:33:37.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032416 has a single transcript. 2021-10-25 09:33:37.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032419: ['FBtr0080341'] 2021-10-25 09:33:37.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032419 has a single transcript. 2021-10-25 09:33:37.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266917: ['FBtr0083374'] 2021-10-25 09:33:37.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266917 has a single transcript. 2021-10-25 09:33:37.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032420: ['FBtr0080358'] 2021-10-25 09:33:37.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032420 has a single transcript. 2021-10-25 09:33:37.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266918: ['FBtr0073004'] 2021-10-25 09:33:37.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266918 has a single transcript. 2021-10-25 09:33:37.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266925: ['FBtr0345795'] 2021-10-25 09:33:37.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266925 has a single transcript. 2021-10-25 09:33:37.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032421: ['FBtr0080342'] 2021-10-25 09:33:37.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032421 has a single transcript. 2021-10-25 09:33:37.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(317928, 333564), (317928, 418476), (333806, 334666), (333881, 334666), (333897, 334666), (333910, 334666), (418512, 428037), (418512, 470404)] 2021-10-25 09:33:37.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266926: ['FBtr0345796'] 2021-10-25 09:33:37.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266926 has a single transcript. 2021-10-25 09:33:37.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032422: ['FBtr0273342', 'FBtr0331999'] 2021-10-25 09:33:37.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266927: ['FBtr0345820'] 2021-10-25 09:33:37.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266927 has a single transcript. 2021-10-25 09:33:37.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19519625, 19519695), (19519831, 19519903), (19520298, 19520659), (19520827, 19521327), (19520827, 19521672), (19521396, 19521672)] 2021-10-25 09:33:37.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001170: ['FBtr0079227'] 2021-10-25 09:33:37.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001170 has a single transcript. 2021-10-25 09:33:37.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260794: ['FBtr0303911', 'FBtr0303912', 'FBtr0303914', 'FBtr0303915', 'FBtr0303917', 'FBtr0301437', 'FBtr0344028', 'FBtr0344029', 'FBtr0344030', 'FBtr0334902', 'FBtr0334903'] 2021-10-25 09:33:37.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266928: ['FBtr0345821'] 2021-10-25 09:33:37.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266928 has a single transcript. 2021-10-25 09:33:37.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266929: ['FBtr0345822'] 2021-10-25 09:33:37.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001174: ['FBtr0114554'] 2021-10-25 09:33:37.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266929 has a single transcript. 2021-10-25 09:33:37.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001174 has a single transcript. 2021-10-25 09:33:37.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266930: ['FBtr0345823'] 2021-10-25 09:33:37.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266930 has a single transcript. 2021-10-25 09:33:37.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9338866, 9342164), (9340501, 9342164), (9340589, 9342164), (9343129, 9344899), (9344612, 9344899), (9345067, 9345608), (9345067, 9347639), (9345067, 9346590), (9345067, 9346558), (9345124, 9347639), (9345760, 9345827), (9346745, 9346807), (9347249, 9347639)] 2021-10-25 09:33:37.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25638033, 25647498), (25638033, 25646681), (25638072, 25646681), (25638529, 25646681), (25639953, 25646681), (25646743, 25647336), (25646743, 25647498), (25647653, 25648885), (25648565, 25648885), (25649112, 25649184), (25649497, 25649563)] 2021-10-25 09:33:37.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001179: ['FBtr0076253', 'FBtr0114599'] 2021-10-25 09:33:37.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266931: ['FBtr0345824'] 2021-10-25 09:33:37.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266931 has a single transcript. 2021-10-25 09:33:37.768 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12175770, 12176803), (12176974, 12177543)] 2021-10-25 09:33:37.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266932: ['FBtr0345825'] 2021-10-25 09:33:37.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266932 has a single transcript. 2021-10-25 09:33:37.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266933: ['FBtr0345827'] 2021-10-25 09:33:37.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266933 has a single transcript. 2021-10-25 09:33:37.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266934: ['FBtr0345846'] 2021-10-25 09:33:37.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266934 has a single transcript. 2021-10-25 09:33:37.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266935: ['FBtr0345828'] 2021-10-25 09:33:37.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266935 has a single transcript. 2021-10-25 09:33:37.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266936: ['FBtr0345829'] 2021-10-25 09:33:37.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266936 has a single transcript. 2021-10-25 09:33:37.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10631195, 10631365), (10631459, 10631519), (10633318, 10633375)] 2021-10-25 09:33:37.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266937: ['FBtr0346910'] 2021-10-25 09:33:37.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266937 has a single transcript. 2021-10-25 09:33:37.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266938: ['FBtr0345831'] 2021-10-25 09:33:37.827 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266938 has a single transcript. 2021-10-25 09:33:37.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032424: ['FBtr0080354'] 2021-10-25 09:33:37.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032424 has a single transcript. 2021-10-25 09:33:37.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266939: ['FBtr0345832'] 2021-10-25 09:33:37.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266939 has a single transcript. 2021-10-25 09:33:37.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027296: ['FBtr0070414', 'FBtr0345316'] 2021-10-25 09:33:37.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032428: ['FBtr0080366'] 2021-10-25 09:33:37.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032428 has a single transcript. 2021-10-25 09:33:37.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266940: ['FBtr0345834'] 2021-10-25 09:33:37.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266940 has a single transcript. 2021-10-25 09:33:37.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266941: ['FBtr0345833'] 2021-10-25 09:33:37.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266941 has a single transcript. 2021-10-25 09:33:37.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032429: ['FBtr0080388', 'FBtr0333093', 'FBtr0333094'] 2021-10-25 09:33:37.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266942: ['FBtr0345835'] 2021-10-25 09:33:37.859 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266942 has a single transcript. 2021-10-25 09:33:37.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266943: ['FBtr0345837'] 2021-10-25 09:33:37.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266943 has a single transcript. 2021-10-25 09:33:37.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2261415, 2261465), (2261854, 2261950)] 2021-10-25 09:33:37.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266944: ['FBtr0345836'] 2021-10-25 09:33:37.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266944 has a single transcript. 2021-10-25 09:33:37.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001180: ['FBtr0081950', 'FBtr0081951'] 2021-10-25 09:33:37.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266945: ['FBtr0345844'] 2021-10-25 09:33:37.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266945 has a single transcript. 2021-10-25 09:33:37.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266946: ['FBtr0345838'] 2021-10-25 09:33:37.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266946 has a single transcript. 2021-10-25 09:33:37.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266947: ['FBtr0345839'] 2021-10-25 09:33:37.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266947 has a single transcript. 2021-10-25 09:33:37.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12427369, 12427468), (12427387, 12427468)] 2021-10-25 09:33:37.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266948: ['FBtr0345840'] 2021-10-25 09:33:37.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266948 has a single transcript. 2021-10-25 09:33:37.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027329: ['FBtr0074086'] 2021-10-25 09:33:37.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266949: ['FBtr0345841'] 2021-10-25 09:33:37.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027329 has a single transcript. 2021-10-25 09:33:37.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266949 has a single transcript. 2021-10-25 09:33:37.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8694172, 8694455), (8694172, 8697325)] 2021-10-25 09:33:37.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266950: ['FBtr0345843'] 2021-10-25 09:33:37.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266950 has a single transcript. 2021-10-25 09:33:37.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027330: ['FBtr0071280', 'FBtr0344164'] 2021-10-25 09:33:37.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266951: ['FBtr0345842'] 2021-10-25 09:33:37.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266951 has a single transcript. 2021-10-25 09:33:37.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266952: ['FBtr0345847'] 2021-10-25 09:33:37.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266952 has a single transcript. 2021-10-25 09:33:37.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266953: ['FBtr0345848'] 2021-10-25 09:33:37.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266953 has a single transcript. 2021-10-25 09:33:37.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266954: ['FBtr0345850'] 2021-10-25 09:33:37.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266954 has a single transcript. 2021-10-25 09:33:37.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052817: ['FBtr0070077', 'FBtr0336919', 'FBtr0300328'] 2021-10-25 09:33:37.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4788287, 4788373), (4788575, 4788680), (4788869, 4788932), (4790768, 4790875), (4791864, 4791957), (4793062, 4793217), (4795064, 4795736), (4795064, 4796488), (4795064, 4799691), (4795820, 4796488), (4795820, 4799691), (4795823, 4796488), (4795823, 4799691), (4797067, 4799691), (4797697, 4799691), (4800678, 4801212), (4801991, 4806361), (4801991, 4810671), (4801991, 4806174), (4801991, 4806256), (4801991, 4802726), (4801991, 4811982), (4810787, 4811982)] 2021-10-25 09:33:37.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8716946, 8717086), (8716946, 8717082), (8718056, 8718116), (8719395, 8719455), (8719903, 8719962)] 2021-10-25 09:33:37.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:37.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:37.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266955: ['FBtr0345851'] 2021-10-25 09:33:37.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266955 has a single transcript. 2021-10-25 09:33:37.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266956: ['FBtr0345852'] 2021-10-25 09:33:37.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266956 has a single transcript. 2021-10-25 09:33:37.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266957: ['FBtr0345853'] 2021-10-25 09:33:37.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266957 has a single transcript. 2021-10-25 09:33:37.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001185: ['FBtr0080883', 'FBtr0335138'] 2021-10-25 09:33:38.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266958: ['FBtr0345854'] 2021-10-25 09:33:38.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266958 has a single transcript. 2021-10-25 09:33:38.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266959: ['FBtr0345855', 'FBtr0345856'] 2021-10-25 09:33:38.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032430: ['FBtr0080367'] 2021-10-25 09:33:38.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032430 has a single transcript. 2021-10-25 09:33:38.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032431: ['FBtr0080387', 'FBtr0345613'] 2021-10-25 09:33:38.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027334: ['FBtr0077298'] 2021-10-25 09:33:38.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027334 has a single transcript. 2021-10-25 09:33:38.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(479341, 479401), (479509, 479629), (479509, 479581), (479945, 480029)] 2021-10-25 09:33:38.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16678249, 16678317), (16678581, 16678642)] 2021-10-25 09:33:38.049 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027335: ['FBtr0074616', 'FBtr0343019', 'FBtr0343020', 'FBtr0343021', 'FBtr0301545'] 2021-10-25 09:33:38.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:38.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12430193, 12430277), (12430693, 12430746)] 2021-10-25 09:33:38.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039354: ['FBtr0084899'] 2021-10-25 09:33:38.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039354 has a single transcript. 2021-10-25 09:33:38.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039355: ['FBtr0084934', 'FBtr0331363', 'FBtr0331364'] 2021-10-25 09:33:38.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001186: ['FBtr0071361', 'FBtr0071362', 'FBtr0333335'] 2021-10-25 09:33:38.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266960: ['FBtr0345857'] 2021-10-25 09:33:38.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266960 has a single transcript. 2021-10-25 09:33:38.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266961: ['FBtr0345858'] 2021-10-25 09:33:38.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266961 has a single transcript. 2021-10-25 09:33:38.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266962: ['FBtr0345862', 'FBtr0346078'] 2021-10-25 09:33:38.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032433: ['FBtr0080384', 'FBtr0333092'] 2021-10-25 09:33:38.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052819: ['FBtr0070051', 'FBtr0070050'] 2021-10-25 09:33:38.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18636319, 18637412), (18636319, 18636613), (18636873, 18637330), (18636873, 18637412), (18637573, 18637634), (18637786, 18638245), (18637786, 18639463), (18640197, 18640265), (18640410, 18647189)] 2021-10-25 09:33:38.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035977: ['FBtr0076439'] 2021-10-25 09:33:38.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035977 has a single transcript. 2021-10-25 09:33:38.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:38.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:38.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25677466, 25677527), (25678431, 25678584), (25678537, 25678595), (25678547, 25678595)] 2021-10-25 09:33:38.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035978: ['FBtr0076500', 'FBtr0076501', 'FBtr0301698', 'FBtr0301699'] 2021-10-25 09:33:38.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12441946, 12442008), (12442688, 12442755), (12442949, 12443010), (12443754, 12443813), (12444055, 12444168), (12444530, 12445679), (12444542, 12445679)] 2021-10-25 09:33:38.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.183 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21618025, 21618095), (21618819, 21618979), (21619567, 21619690), (21620043, 21620715)] 2021-10-25 09:33:38.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.184 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.184 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.185 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071361': ['FBtr0071362']} 2021-10-25 09:33:38.185 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0071362']] 2021-10-25 09:33:38.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266963: ['FBtr0345860'] 2021-10-25 09:33:38.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266963 has a single transcript. 2021-10-25 09:33:38.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001187: ['FBtr0087399'] 2021-10-25 09:33:38.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001187 has a single transcript. 2021-10-25 09:33:38.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266964: ['FBtr0345861'] 2021-10-25 09:33:38.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266964 has a single transcript. 2021-10-25 09:33:38.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032434: ['FBtr0080383', 'FBtr0333091'] 2021-10-25 09:33:38.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052820: ['FBtr0070053', 'FBtr0070054'] 2021-10-25 09:33:38.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266965: ['FBtr0345863'] 2021-10-25 09:33:38.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266965 has a single transcript. 2021-10-25 09:33:38.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001189: ['FBtr0070270', 'FBtr0333115'] 2021-10-25 09:33:38.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266966: ['FBtr0345864'] 2021-10-25 09:33:38.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266966 has a single transcript. 2021-10-25 09:33:38.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266967: ['FBtr0345865'] 2021-10-25 09:33:38.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266967 has a single transcript. 2021-10-25 09:33:38.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039356: ['FBtr0084900'] 2021-10-25 09:33:38.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039356 has a single transcript. 2021-10-25 09:33:38.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266968: ['FBtr0345866'] 2021-10-25 09:33:38.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266968 has a single transcript. 2021-10-25 09:33:38.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9351850, 9351917), (9352327, 9352404), (9352543, 9352601), (9352827, 9352881), (9353228, 9353512), (9353228, 9353737), (9353518, 9353737), (9353829, 9353887), (9354074, 9357582), (9354074, 9358614)] 2021-10-25 09:33:38.283 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12446614, 12446765), (12447380, 12447543), (12447793, 12447853), (12447959, 12448015)] 2021-10-25 09:33:38.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266969: ['FBtr0345867'] 2021-10-25 09:33:38.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039357: ['FBtr0084933'] 2021-10-25 09:33:38.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266969 has a single transcript. 2021-10-25 09:33:38.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039357 has a single transcript. 2021-10-25 09:33:38.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266970: ['FBtr0345868'] 2021-10-25 09:33:38.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266970 has a single transcript. 2021-10-25 09:33:38.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039358: ['FBtr0084901', 'FBtr0113289', 'FBtr0113290', 'FBtr0113291'] 2021-10-25 09:33:38.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21611933, 21612003), (21612727, 21612887), (21613475, 21613598), (21613951, 21614623)] 2021-10-25 09:33:38.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266971: ['FBtr0345869'] 2021-10-25 09:33:38.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266971 has a single transcript. 2021-10-25 09:33:38.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1669937, 1670815), (1671729, 1671786), (1672297, 1672363)] 2021-10-25 09:33:38.304 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.305 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266972: ['FBtr0345870'] 2021-10-25 09:33:38.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266972 has a single transcript. 2021-10-25 09:33:38.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266973: ['FBtr0345875', 'FBtr0346079'] 2021-10-25 09:33:38.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032435: ['FBtr0080370'] 2021-10-25 09:33:38.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032435 has a single transcript. 2021-10-25 09:33:38.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032436: ['FBtr0080382'] 2021-10-25 09:33:38.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032436 has a single transcript. 2021-10-25 09:33:38.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027338: ['FBtr0082106', 'FBtr0082107', 'FBtr0082108', 'FBtr0301189'] 2021-10-25 09:33:38.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001197: ['FBtr0085062', 'FBtr0334311'] 2021-10-25 09:33:38.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052821: ['FBtr0307588'] 2021-10-25 09:33:38.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052821 has a single transcript. 2021-10-25 09:33:38.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032437: ['FBtr0329828'] 2021-10-25 09:33:38.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032437 has a single transcript. 2021-10-25 09:33:38.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052823: ['FBtr0346675', 'FBtr0346676', 'FBtr0346677'] 2021-10-25 09:33:38.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:38.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032439: ['FBtr0080376', 'FBtr0308800', 'FBtr0308801'] 2021-10-25 09:33:38.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25681023, 25681120), (25681198, 25681265), (25682045, 25682104), (25682291, 25682355), (25682431, 25683472), (25682431, 25683057), (25683383, 25683472)] 2021-10-25 09:33:38.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26867095, 26867408), (26867486, 26867668), (26867782, 26868355), (26868686, 26868741)] 2021-10-25 09:33:38.409 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26868355, 26868908, 'FBtr0085062_exon_4') contains intron (26868686, 26868741) 2021-10-25 09:33:38.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085062_exon_4'] 2021-10-25 09:33:38.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266974: ['FBtr0345876'] 2021-10-25 09:33:38.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266974 has a single transcript. 2021-10-25 09:33:38.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12611395, 12640906), (12611395, 12611444), (12641280, 12646098), (12641280, 12645892)] 2021-10-25 09:33:38.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035980: ['FBtr0076444'] 2021-10-25 09:33:38.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035980 has a single transcript. 2021-10-25 09:33:38.439 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20190415, 20190482), (20191405, 20191788), (20191965, 20193874), (20194002, 20194070)] 2021-10-25 09:33:38.440 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266975: ['FBtr0345877'] 2021-10-25 09:33:38.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266975 has a single transcript. 2021-10-25 09:33:38.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035981: ['FBtr0089493', 'FBtr0333883'] 2021-10-25 09:33:38.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9575569, 9575635), (9575812, 9575876), (9576707, 9576767), (9577148, 9577207), (9577309, 9577647), (9577334, 9577607), (9577366, 9577607)] 2021-10-25 09:33:38.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266976: ['FBtr0345878'] 2021-10-25 09:33:38.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266976 has a single transcript. 2021-10-25 09:33:38.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266977: ['FBtr0345874'] 2021-10-25 09:33:38.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266977 has a single transcript. 2021-10-25 09:33:38.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260795: ['FBtr0301438', 'FBtr0332705'] 2021-10-25 09:33:38.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266978: ['FBtr0345879'] 2021-10-25 09:33:38.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266978 has a single transcript. 2021-10-25 09:33:38.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001202: ['FBtr0081180'] 2021-10-25 09:33:38.468 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001202 has a single transcript. 2021-10-25 09:33:38.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266979: ['FBtr0345881'] 2021-10-25 09:33:38.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266979 has a single transcript. 2021-10-25 09:33:38.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001206: ['FBtr0071511'] 2021-10-25 09:33:38.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001206 has a single transcript. 2021-10-25 09:33:38.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266980: ['FBtr0345880'] 2021-10-25 09:33:38.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266980 has a single transcript. 2021-10-25 09:33:38.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9367611, 9367948), (9368013, 9368100), (9368214, 9368567), (9368214, 9368900), (9368661, 9368900), (9369314, 9369545)] 2021-10-25 09:33:38.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266981: ['FBtr0345882'] 2021-10-25 09:33:38.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266981 has a single transcript. 2021-10-25 09:33:38.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001208: ['FBtr0076811', 'FBtr0100225', 'FBtr0334645', 'FBtr0334646'] 2021-10-25 09:33:38.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266982: ['FBtr0345884'] 2021-10-25 09:33:38.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266982 has a single transcript. 2021-10-25 09:33:38.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11123466, 11128691), (11128744, 11128811), (11129880, 11129952), (11130549, 11132647), (11133024, 11133094), (11133597, 11133666)] 2021-10-25 09:33:38.502 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.502 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266983: ['FBtr0345885'] 2021-10-25 09:33:38.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266983 has a single transcript. 2021-10-25 09:33:38.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266984: ['FBtr0345886'] 2021-10-25 09:33:38.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266984 has a single transcript. 2021-10-25 09:33:38.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266985: ['FBtr0345887'] 2021-10-25 09:33:38.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266985 has a single transcript. 2021-10-25 09:33:38.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032442: ['FBtr0080412', 'FBtr0340546'] 2021-10-25 09:33:38.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266986: ['FBtr0345889', 'FBtr0345890'] 2021-10-25 09:33:38.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039359: ['FBtr0084932', 'FBtr0331360', 'FBtr0331361', 'FBtr0331362'] 2021-10-25 09:33:38.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052826: ['FBtr0070001'] 2021-10-25 09:33:38.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052826 has a single transcript. 2021-10-25 09:33:38.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052829: ['FBtr0079370'] 2021-10-25 09:33:38.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052829 has a single transcript. 2021-10-25 09:33:38.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035982: ['FBtr0076452'] 2021-10-25 09:33:38.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035982 has a single transcript. 2021-10-25 09:33:38.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052831: ['FBtr0091683', 'FBtr0091680', 'FBtr0091681', 'FBtr0091682'] 2021-10-25 09:33:38.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035983: ['FBtr0076494', 'FBtr0309506'] 2021-10-25 09:33:38.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260798: ['FBtr0302242', 'FBtr0111121', 'FBtr0345363'] 2021-10-25 09:33:38.583 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:38.584 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.584 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7760656, 7761562), (7760656, 7760983), (7761277, 7761562), (7762235, 7762293), (7762556, 7762621), (7762851, 7762911)] 2021-10-25 09:33:38.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16196690, 16196775)] 2021-10-25 09:33:38.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.596 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16196501, 16197219, 'FBtr0345890_exon_1') contains intron (16196690, 16196775) 2021-10-25 09:33:38.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345890_exon_1'] 2021-10-25 09:33:38.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027339: ['FBtr0078582', 'FBtr0100184', 'FBtr0330076', 'FBtr0333211', 'FBtr0333212', 'FBtr0333213', 'FBtr0304985'] 2021-10-25 09:33:38.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9388383, 9388441), (9389118, 9390001), (9390122, 9390280), (9390425, 9390566), (9390798, 9398506)] 2021-10-25 09:33:38.625 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.625 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25684516, 25685017), (25684516, 25685024), (25684516, 25684958)] 2021-10-25 09:33:38.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.655 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4322715, 4322775), (4322938, 4336376), (4336583, 4350548), (4350767, 4351117), (4351218, 4378368), (4378695, 4378748), (4378904, 4378963), (4379155, 4407980), (4408032, 4427935), (4427997, 4458022), (4458097, 4458153), (4458255, 4458306), (4458380, 4458440), (4458517, 4470769), (4470953, 4471038)] 2021-10-25 09:33:38.656 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4470769, 4471060, 'FBtr0111121_exon_1') contains intron (4470953, 4471038) 2021-10-25 09:33:38.656 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4470769, 4471060, 'FBtr0345363_exon_1') contains intron (4470953, 4471038) 2021-10-25 09:33:38.656 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111121_exon_1', 'FBtr0345363_exon_1'] 2021-10-25 09:33:38.656 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266987: ['FBtr0345903'] 2021-10-25 09:33:38.658 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266987 has a single transcript. 2021-10-25 09:33:38.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266988: ['FBtr0345904'] 2021-10-25 09:33:38.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266988 has a single transcript. 2021-10-25 09:33:38.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032444: ['FBtr0080411'] 2021-10-25 09:33:38.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032444 has a single transcript. 2021-10-25 09:33:38.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266989: ['FBtr0345905'] 2021-10-25 09:33:38.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266989 has a single transcript. 2021-10-25 09:33:38.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11278130, 11278393), (11278322, 11278393), (11278485, 11278754), (11278485, 11278574), (11278673, 11278754)] 2021-10-25 09:33:38.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032445: ['FBtr0080394', 'FBtr0340541'] 2021-10-25 09:33:38.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266990: ['FBtr0345907'] 2021-10-25 09:33:38.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266990 has a single transcript. 2021-10-25 09:33:38.682 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11278278, 11278485, 'FBtr0091681_exon_1') contains intron (11278322, 11278393) 2021-10-25 09:33:38.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0091681_exon_1'] 2021-10-25 09:33:38.683 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035985: ['FBtr0076455'] 2021-10-25 09:33:38.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266991: ['FBtr0345913'] 2021-10-25 09:33:38.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035985 has a single transcript. 2021-10-25 09:33:38.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266991 has a single transcript. 2021-10-25 09:33:38.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266992: ['FBtr0345914'] 2021-10-25 09:33:38.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266992 has a single transcript. 2021-10-25 09:33:38.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035986: ['FBtr0076486', 'FBtr0309088', 'FBtr0309089'] 2021-10-25 09:33:38.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266993: ['FBtr0345915'] 2021-10-25 09:33:38.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266993 has a single transcript. 2021-10-25 09:33:38.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266994: ['FBtr0345916'] 2021-10-25 09:33:38.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266994 has a single transcript. 2021-10-25 09:33:38.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0266995: ['FBtr0345917'] 2021-10-25 09:33:38.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0266995 has a single transcript. 2021-10-25 09:33:38.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267001: ['FBtr0346335', 'FBtr0299858', 'FBtr0299859', 'FBtr0299860', 'FBtr0346129', 'FBtr0300201', 'FBtr0300203', 'FBtr0308221', 'FBtr0308222', 'FBtr0308223', 'FBtr0310078'] 2021-10-25 09:33:38.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12693402, 12693465), (12693656, 12693719)] 2021-10-25 09:33:38.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001215: ['FBtr0085302', 'FBtr0085300', 'FBtr0085298', 'FBtr0085299', 'FBtr0085301', 'FBtr0085303'] 2021-10-25 09:33:38.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9409191, 9409262), (9409432, 9409519), (9410406, 9410586), (9410406, 9410496), (9410406, 9410640)] 2021-10-25 09:33:38.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.790 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260799: ['FBtr0111114'] 2021-10-25 09:33:38.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260799 has a single transcript. 2021-10-25 09:33:38.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260812: ['FBtr0301267'] 2021-10-25 09:33:38.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260812 has a single transcript. 2021-10-25 09:33:38.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260817: ['FBtr0077574'] 2021-10-25 09:33:38.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260817 has a single transcript. 2021-10-25 09:33:38.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039360: ['FBtr0084929', 'FBtr0084930', 'FBtr0084931', 'FBtr0331359'] 2021-10-25 09:33:38.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260855: ['FBtr0070141', 'FBtr0310162'] 2021-10-25 09:33:38.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032446: ['FBtr0300273'] 2021-10-25 09:33:38.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032446 has a single transcript. 2021-10-25 09:33:38.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22798478, 22798801), (22798478, 22798798), (22798481, 22798798), (22799190, 22799250), (22799202, 22799250), (22799448, 22800024), (22799448, 22799940), (22800784, 22800849), (22801741, 22824040), (22801741, 22831936), (22833799, 22835168)] 2021-10-25 09:33:38.847 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032447: ['FBtr0080395', 'FBtr0080396', 'FBtr0340542', 'FBtr0340543', 'FBtr0340544'] 2021-10-25 09:33:38.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(806559, 806632), (806565, 806632), (806742, 806968), (807270, 807353)] 2021-10-25 09:33:38.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052832: ['FBtr0080960', 'FBtr0340177'] 2021-10-25 09:33:38.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035987: ['FBtr0076456', 'FBtr0110863'] 2021-10-25 09:33:38.932 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16878876, 16879016), (16879057, 16879110)] 2021-10-25 09:33:38.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25685500, 25685566), (25685702, 25685767), (25685983, 25686314), (25686866, 25686945), (25686866, 25687250), (25686866, 25686981), (25687014, 25687250)] 2021-10-25 09:33:38.934 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25686314, 25687014, 'FBtr0084929_exon_2') contains intron (25686866, 25686945) 2021-10-25 09:33:38.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084929_exon_2'] 2021-10-25 09:33:38.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28599999, 28600717), (28599999, 28600705), (28600568, 28600717), (28600568, 28600705), (28601195, 28602771), (28602947, 28603011), (28603318, 28603607), (28603698, 28604060), (28603698, 28605461)] 2021-10-25 09:33:38.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260856: ['FBtr0077145'] 2021-10-25 09:33:38.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260856 has a single transcript. 2021-10-25 09:33:38.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260857: ['FBtr0074989', 'FBtr0074990'] 2021-10-25 09:33:38.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9411421, 9411478), (9411743, 9411816), (9411982, 9412154), (9411982, 9413202), (9413317, 9413390)] 2021-10-25 09:33:38.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12695162, 12695304), (12695162, 12696266), (12695523, 12696266), (12696136, 12696266), (12696140, 12696203), (12696378, 12697465)] 2021-10-25 09:33:38.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:38.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:38.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052833: ['FBtr0071990'] 2021-10-25 09:33:39.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052833 has a single transcript. 2021-10-25 09:33:39.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052834: ['FBtr0303210'] 2021-10-25 09:33:39.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052834 has a single transcript. 2021-10-25 09:33:39.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19261607, 19261712), (19261655, 19261712)] 2021-10-25 09:33:39.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052835: ['FBtr0308940', 'FBtr0308941'] 2021-10-25 09:33:39.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035988: ['FBtr0076485'] 2021-10-25 09:33:39.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035988 has a single transcript. 2021-10-25 09:33:39.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22951918, 22951987), (22952060, 22953421)] 2021-10-25 09:33:39.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12044349, 12077154), (12077241, 12145794), (12128914, 12145794), (12145828, 12193603), (12194223, 12195768), (12196623, 12197185), (12197255, 12229665), (12197255, 12204138), (12197255, 12273934), (12203878, 12204138), (12203978, 12204138), (12203984, 12204138), (12203996, 12204138), (12204409, 12229665), (12230370, 12276511), (12230370, 12273934), (12274240, 12276511), (12276618, 12285500), (12286706, 12286859), (12287054, 12288965), (12289175, 12291659), (12291845, 12295189), (12295336, 12295476), (12295684, 12312791), (12295684, 12298168), (12298195, 12312791), (12312911, 12316763), (12316931, 12317212), (12317405, 12318042), (12319427, 12321914), (12322459, 12327290)] 2021-10-25 09:33:39.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035989: ['FBtr0076480', 'FBtr0076481', 'FBtr0076482', 'FBtr0076483', 'FBtr0076484', 'FBtr0331584'] 2021-10-25 09:33:39.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260858: ['FBtr0071093'] 2021-10-25 09:33:39.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260858 has a single transcript. 2021-10-25 09:33:39.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260859: ['FBtr0089879'] 2021-10-25 09:33:39.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260859 has a single transcript. 2021-10-25 09:33:39.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039366: ['FBtr0084924', 'FBtr0344619'] 2021-10-25 09:33:39.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260860: ['FBtr0085570'] 2021-10-25 09:33:39.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260860 has a single transcript. 2021-10-25 09:33:39.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260861: ['FBtr0079730'] 2021-10-25 09:33:39.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260861 has a single transcript. 2021-10-25 09:33:39.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260862: ['FBtr0072607'] 2021-10-25 09:33:39.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052843: ['FBtr0087755', 'FBtr0330735', 'FBtr0330736'] 2021-10-25 09:33:39.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260862 has a single transcript. 2021-10-25 09:33:39.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260866: ['FBtr0071837', 'FBtr0330229'] 2021-10-25 09:33:39.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25774379, 25774457)] 2021-10-25 09:33:39.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027341: ['FBtr0302846', 'FBtr0302847', 'FBtr0302848', 'FBtr0302849', 'FBtr0302850', 'FBtr0113687', 'FBtr0113690', 'FBtr0113692', 'FBtr0113694'] 2021-10-25 09:33:39.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22564426, 22564493), (22565135, 22565694), (22566689, 22592323)] 2021-10-25 09:33:39.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032448: ['FBtr0080409'] 2021-10-25 09:33:39.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032448 has a single transcript. 2021-10-25 09:33:39.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13269093, 13269391), (13269108, 13269391), (13269520, 13272652), (13272776, 13273084), (13273261, 13273539), (13273766, 13273852), (13273979, 13275124), (13275216, 13275289), (13275396, 13277443), (13277581, 13277974), (13278170, 13295271)] 2021-10-25 09:33:39.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032449: ['FBtr0080408', 'FBtr0340545'] 2021-10-25 09:33:39.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039367: ['FBtr0290204'] 2021-10-25 09:33:39.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039367 has a single transcript. 2021-10-25 09:33:39.218 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087755': ['FBtr0330736']} 2021-10-25 09:33:39.219 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330736']] 2021-10-25 09:33:39.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001216: ['FBtr0075761', 'FBtr0075762', 'FBtr0075763'] 2021-10-25 09:33:39.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039368: ['FBtr0084922', 'FBtr0302177', 'FBtr0337040'] 2021-10-25 09:33:39.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9414765, 9415407), (9415296, 9415407), (9415466, 9417651), (9417814, 9418343), (9418724, 9418843), (9418999, 9419094), (9419271, 9420087), (9419271, 9426222), (9419271, 9419896)] 2021-10-25 09:33:39.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260867: ['FBtr0301567'] 2021-10-25 09:33:39.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260867 has a single transcript. 2021-10-25 09:33:39.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12699706, 12699770)] 2021-10-25 09:33:39.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260868: ['FBtr0301566'] 2021-10-25 09:33:39.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260868 has a single transcript. 2021-10-25 09:33:39.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260869: ['FBtr0301565'] 2021-10-25 09:33:39.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260869 has a single transcript. 2021-10-25 09:33:39.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052845: ['FBtr0072518'] 2021-10-25 09:33:39.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052845 has a single transcript. 2021-10-25 09:33:39.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052846: ['FBtr0073009', 'FBtr0304042'] 2021-10-25 09:33:39.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260870: ['FBtr0301564'] 2021-10-25 09:33:39.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260870 has a single transcript. 2021-10-25 09:33:39.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13974410, 13974559), (13974775, 13975916), (13974775, 13975716), (13975848, 13975916)] 2021-10-25 09:33:39.291 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13975716, 13977761, 'FBtr0075761_exon_3') contains intron (13975848, 13975916) 2021-10-25 09:33:39.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075761_exon_3'] 2021-10-25 09:33:39.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25776035, 25776110), (25776080, 25776149)] 2021-10-25 09:33:39.296 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25775287, 25776237, 'FBtr0084922_exon_1') contains intron (25776035, 25776110) 2021-10-25 09:33:39.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260871: ['FBtr0301573'] 2021-10-25 09:33:39.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260871 has a single transcript. 2021-10-25 09:33:39.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084922_exon_1'] 2021-10-25 09:33:39.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260873: ['FBtr0301570'] 2021-10-25 09:33:39.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260873 has a single transcript. 2021-10-25 09:33:39.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032450: ['FBtr0080407', 'FBtr0329925'] 2021-10-25 09:33:39.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260874: ['FBtr0301603', 'FBtr0301604', 'FBtr0301606', 'FBtr0301607'] 2021-10-25 09:33:39.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2951194, 2951257), (2951440, 2951495)] 2021-10-25 09:33:39.338 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2951257, 2951618, 'FBtr0073009_exon_1') contains intron (2951440, 2951495) 2021-10-25 09:33:39.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073009_exon_1'] 2021-10-25 09:33:39.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12703391, 12703444), (12703936, 12703994)] 2021-10-25 09:33:39.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052847: ['FBtr0075639'] 2021-10-25 09:33:39.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052847 has a single transcript. 2021-10-25 09:33:39.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001217: ['FBtr0082707'] 2021-10-25 09:33:39.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001217 has a single transcript. 2021-10-25 09:33:39.404 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4126758, 4132881), (4130635, 4132881), (4132926, 4133218), (4132926, 4133037), (4133149, 4133218), (4133416, 4133463), (4133633, 4133706), (4133919, 4134366), (4133919, 4135259), (4133919, 4134145), (4134172, 4134366), (4134390, 4135259), (4134390, 4135223), (4135381, 4136420), (4137260, 4137319)] 2021-10-25 09:33:39.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0302846_exon_5') contains intron (4133633, 4133706) 2021-10-25 09:33:39.406 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133218, 4135381, 'FBtr0302847_exon_3') contains intron (4133416, 4133463) 2021-10-25 09:33:39.406 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0302848_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.407 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0302849_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039369: ['FBtr0084921'] 2021-10-25 09:33:39.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039369 has a single transcript. 2021-10-25 09:33:39.407 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0302850_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.408 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0113687_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.408 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0113692_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.409 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4133463, 4133919, 'FBtr0113694_exon_4') contains intron (4133633, 4133706) 2021-10-25 09:33:39.409 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302846_exon_5', 'FBtr0302847_exon_3', 'FBtr0302848_exon_4', 'FBtr0302849_exon_4', 'FBtr0302850_exon_4', 'FBtr0113687_exon_4', 'FBtr0113692_exon_4', 'FBtr0113694_exon_4'] 2021-10-25 09:33:39.409 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052850: ['FBtr0089123', 'FBtr0333680'] 2021-10-25 09:33:39.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001218: ['FBtr0073608', 'FBtr0073609', 'FBtr0073610', 'FBtr0073611', 'FBtr0345166'] 2021-10-25 09:33:39.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039370: ['FBtr0084920'] 2021-10-25 09:33:39.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039370 has a single transcript. 2021-10-25 09:33:39.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19799332, 19799383), (19799625, 19801445), (19801406, 19801455), (19801608, 19801665), (19801928, 19801977), (19801928, 19801990), (19802114, 19802165), (19802274, 19802335), (19802840, 19802897)] 2021-10-25 09:33:39.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032451: ['FBtr0080397', 'FBtr0329924'] 2021-10-25 09:33:39.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039371: ['FBtr0084919', 'FBtr0346108'] 2021-10-25 09:33:39.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(314957, 316392), (315179, 316392), (316509, 319448), (316509, 319451), (320039, 328162)] 2021-10-25 09:33:39.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.473 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12705092, 12705590)] 2021-10-25 09:33:39.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:39.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.481 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0080397': ['FBtr0329924']} 2021-10-25 09:33:39.481 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329924']] 2021-10-25 09:33:39.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035993: ['FBtr0076504'] 2021-10-25 09:33:39.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035993 has a single transcript. 2021-10-25 09:33:39.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032452: ['FBtr0080406'] 2021-10-25 09:33:39.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032452 has a single transcript. 2021-10-25 09:33:39.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035995: ['FBtr0076461', 'FBtr0331582', 'FBtr0331583'] 2021-10-25 09:33:39.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032453: ['FBtr0080398'] 2021-10-25 09:33:39.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032453 has a single transcript. 2021-10-25 09:33:39.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032454: ['FBtr0080405', 'FBtr0332410'] 2021-10-25 09:33:39.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052855: ['FBtr0083234'] 2021-10-25 09:33:39.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052855 has a single transcript. 2021-10-25 09:33:39.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11804458, 11804896), (11805042, 11806868), (11805042, 11806077), (11805042, 11806243), (11805042, 11805288)] 2021-10-25 09:33:39.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052856: ['FBtr0083239', 'FBtr0302551'] 2021-10-25 09:33:39.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039373: ['FBtr0084902', 'FBtr0301962'] 2021-10-25 09:33:39.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9447062, 9448387), (9448839, 9448900), (9449628, 9449688), (9449815, 9450017), (9449824, 9450017), (9449824, 9450231), (9450068, 9450231)] 2021-10-25 09:33:39.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12709309, 12709374), (12710225, 12710361), (12712531, 12712854)] 2021-10-25 09:33:39.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15965019, 15965073)] 2021-10-25 09:33:39.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260932: ['FBtr0088034'] 2021-10-25 09:33:39.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260932 has a single transcript. 2021-10-25 09:33:39.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:39.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260933: ['FBtr0078078', 'FBtr0303763'] 2021-10-25 09:33:39.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032455: ['FBtr0089908', 'FBtr0301163'] 2021-10-25 09:33:39.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267002: ['FBtr0304679', 'FBtr0304680', 'FBtr0330003', 'FBtr0087079', 'FBtr0113087', 'FBtr0113088', 'FBtr0113089', 'FBtr0346959'] 2021-10-25 09:33:39.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052857: ['FBtr0070052'] 2021-10-25 09:33:39.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052857 has a single transcript. 2021-10-25 09:33:39.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039374: ['FBtr0084903'] 2021-10-25 09:33:39.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039374 has a single transcript. 2021-10-25 09:33:39.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052865: ['FBtr0082678'] 2021-10-25 09:33:39.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052865 has a single transcript. 2021-10-25 09:33:39.648 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(554274, 554335), (555446, 555509), (557665, 557721), (557882, 557942), (558541, 559562), (558541, 558615)] 2021-10-25 09:33:39.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039376: ['FBtr0084905'] 2021-10-25 09:33:39.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039376 has a single transcript. 2021-10-25 09:33:39.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052939: ['FBtr0082085'] 2021-10-25 09:33:39.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052939 has a single transcript. 2021-10-25 09:33:39.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035996: ['FBtr0076476'] 2021-10-25 09:33:39.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035996 has a single transcript. 2021-10-25 09:33:39.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039378: ['FBtr0300129'] 2021-10-25 09:33:39.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039378 has a single transcript. 2021-10-25 09:33:39.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039379: ['FBtr0084907'] 2021-10-25 09:33:39.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039379 has a single transcript. 2021-10-25 09:33:39.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052944: ['FBtr0339973', 'FBtr0290249', 'FBtr0290250'] 2021-10-25 09:33:39.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035997: ['FBtr0076475', 'FBtr0345600'] 2021-10-25 09:33:39.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12713375, 12713442), (12713586, 12713649), (12714296, 12721450), (12714546, 12714648), (12715529, 12715893), (12718056, 12721450), (12721562, 12721652)] 2021-10-25 09:33:39.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039380: ['FBtr0084908', 'FBtr0339158', 'FBtr0339159'] 2021-10-25 09:33:39.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9455642, 9455737)] 2021-10-25 09:33:39.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001220: ['FBtr0087568', 'FBtr0339969'] 2021-10-25 09:33:39.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260934: ['FBtr0086450', 'FBtr0086457', 'FBtr0100390', 'FBtr0100393', 'FBtr0301503', 'FBtr0301504', 'FBtr0301505', 'FBtr0301506', 'FBtr0330243', 'FBtr0330244', 'FBtr0330245'] 2021-10-25 09:33:39.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4408003, 4408058), (4408240, 4412880), (4413006, 4413240), (4413367, 4413435), (4413506, 4414532), (4414698, 4414759), (4414815, 4414950), (4414815, 4415682), (4415886, 4419106), (4415886, 4418565), (4419036, 4419106)] 2021-10-25 09:33:39.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25856223, 25856561), (25856973, 25867099), (25867459, 25868143), (25868213, 25868452), (25868523, 25868592), (25868787, 25869537)] 2021-10-25 09:33:39.747 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25856153, 25856973, 'FBtr0339159_exon_1') contains intron (25856223, 25856561) 2021-10-25 09:33:39.747 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339159_exon_1'] 2021-10-25 09:33:39.747 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032456: ['FBtr0090014', 'FBtr0090013', 'FBtr0090024', 'FBtr0090022', 'FBtr0090021', 'FBtr0090020', 'FBtr0090018', 'FBtr0090019', 'FBtr0090017', 'FBtr0090016', 'FBtr0090015', 'FBtr0090028', 'FBtr0090029', 'FBtr0090023', 'FBtr0090027', 'FBtr0090026', 'FBtr0090025', 'FBtr0347485'] 2021-10-25 09:33:39.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14253288, 14253351), (14253492, 14253552), (14254657, 14254828), (14255407, 14255668), (14255715, 14255833)] 2021-10-25 09:33:39.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035998: ['FBtr0301032'] 2021-10-25 09:33:39.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035998 has a single transcript. 2021-10-25 09:33:39.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027342: ['FBtr0071017', 'FBtr0071018'] 2021-10-25 09:33:39.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035999: ['FBtr0076463', 'FBtr0114371'] 2021-10-25 09:33:39.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16753537, 16753598), (16753700, 16753765), (16753902, 16753962), (16754152, 16754242), (16754152, 16755886), (16754269, 16755886), (16755998, 16756057), (16756450, 16756555), (16756450, 16756564), (16756745, 16756800), (16757163, 16757232), (16757529, 16757596), (16757687, 16757747), (16757925, 16757992), (16758402, 16759251), (16758402, 16758622), (16758829, 16759251), (16759442, 16759509), (16759676, 16759734), (16760517, 16760597), (16760714, 16761667), (16760714, 16761405), (16761447, 16761667), (16761807, 16761869), (16762033, 16762187), (16762443, 16762511), (16762696, 16762752), (16762992, 16763050), (16763133, 16763197), (16763340, 16772257), (16763340, 16772253), (16763340, 16764137), (16764374, 16765832)] 2021-10-25 09:33:39.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9456616, 9457977), (9458357, 9458410), (9459116, 9459182)] 2021-10-25 09:33:39.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7108249, 7108311), (7108550, 7108611), (7109702, 7109955)] 2021-10-25 09:33:39.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.838 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7108611, 7110321, 'FBtr0071018_exon_1') contains intron (7109702, 7109955) 2021-10-25 09:33:39.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071018_exon_1'] 2021-10-25 09:33:39.839 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001222: ['FBtr0110964', 'FBtr0110965', 'FBtr0110966', 'FBtr0086782'] 2021-10-25 09:33:39.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052945: ['FBtr0078896'] 2021-10-25 09:33:39.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052945 has a single transcript. 2021-10-25 09:33:39.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039381: ['FBtr0084909', 'FBtr0084910', 'FBtr0084911', 'FBtr0344118', 'FBtr0300819', 'FBtr0300820'] 2021-10-25 09:33:39.873 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330003': ['FBtr0346959']} 2021-10-25 09:33:39.874 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346959']] 2021-10-25 09:33:39.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052971: ['FBtr0080621', 'FBtr0114462', 'FBtr0114463'] 2021-10-25 09:33:39.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036000: ['FBtr0076473'] 2021-10-25 09:33:39.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036000 has a single transcript. 2021-10-25 09:33:39.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036004: ['FBtr0076468'] 2021-10-25 09:33:39.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036004 has a single transcript. 2021-10-25 09:33:39.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027343: ['FBtr0070138', 'FBtr0112928', 'FBtr0345511'] 2021-10-25 09:33:39.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036005: ['FBtr0076471'] 2021-10-25 09:33:39.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036005 has a single transcript. 2021-10-25 09:33:39.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036007: ['FBtr0076427', 'FBtr0333864', 'FBtr0333865'] 2021-10-25 09:33:39.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18130906, 18130969), (18131045, 18131281), (18131045, 18131135), (18131189, 18131281), (18131387, 18131459), (18131734, 18131793), (18132941, 18133003), (18133112, 18133870), (18134095, 18134406), (18134108, 18134406)] 2021-10-25 09:33:39.931 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18131281, 18131734, 'FBtr0110964_exon_5') contains intron (18131387, 18131459) 2021-10-25 09:33:39.931 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18131281, 18131734, 'FBtr0110966_exon_5') contains intron (18131387, 18131459) 2021-10-25 09:33:39.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110964_exon_5', 'FBtr0110966_exon_5'] 2021-10-25 09:33:39.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.943 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14274940, 14277312), (14277400, 14277461)] 2021-10-25 09:33:39.944 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14277312, 14278002, 'FBtr0114462_exon_2') contains intron (14277400, 14277461) 2021-10-25 09:33:39.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114462_exon_2'] 2021-10-25 09:33:39.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19456975, 19459794), (19460616, 19470596), (19462643, 19464309), (19462779, 19464309), (19463099, 19468789), (19465694, 19466155), (19465694, 19470596), (19467641, 19468789), (19470338, 19470596), (19470812, 19470871), (19471092, 19471208), (19471490, 19471551), (19471736, 19472818), (19471745, 19472818), (19472931, 19472995), (19473164, 19473439), (19473179, 19473439), (19473554, 19473612), (19473740, 19473804), (19473967, 19477660), (19473967, 19477633), (19473967, 19478751), (19473967, 19477615), (19473967, 19474527), (19474641, 19478751), (19474641, 19477633), (19477704, 19478741), (19478865, 19482951), (19478865, 19481150), (19483101, 19483167), (19483286, 19483348)] 2021-10-25 09:33:39.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(770447, 781475), (778210, 781475)] 2021-10-25 09:33:39.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25882275, 25885118), (25882275, 25885381), (25882275, 25884101), (25882622, 25885381), (25884255, 25885381), (25885319, 25885381), (25885829, 25885879), (25885829, 25885894), (25886020, 25886306), (25886498, 25886565), (25887019, 25887110), (25887231, 25887297)] 2021-10-25 09:33:39.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:39.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9495851, 9495916), (9496831, 9496897), (9497048, 9497115), (9497211, 9497293), (9497211, 9499021), (9499086, 9499163), (9499214, 9500706), (9499214, 9505131), (9501056, 9505131)] 2021-10-25 09:33:39.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:39.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.001 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086450': ['FBtr0330245']} 2021-10-25 09:33:40.001 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330245']] 2021-10-25 09:33:40.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052982: ['FBtr0110960', 'FBtr0079771', 'FBtr0330218', 'FBtr0330219', 'FBtr0301039', 'FBtr0301040', 'FBtr0303888'] 2021-10-25 09:33:40.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027348: ['FBtr0080590', 'FBtr0346624'] 2021-10-25 09:33:40.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001223: ['FBtr0100558', 'FBtr0100559'] 2021-10-25 09:33:40.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036008: ['FBtr0076426', 'FBtr0333863'] 2021-10-25 09:33:40.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14013138, 14015786), (14013917, 14015786), (14016034, 14016131), (14016477, 14016537), (14017037, 14018034), (14018626, 14018685)] 2021-10-25 09:33:40.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9373095, 9373161), (9373321, 9373389)] 2021-10-25 09:33:40.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267003: ['FBtr0345953'] 2021-10-25 09:33:40.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267003 has a single transcript. 2021-10-25 09:33:40.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267004: ['FBtr0345954'] 2021-10-25 09:33:40.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267004 has a single transcript. 2021-10-25 09:33:40.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9508133, 9508219), (9508486, 9508564), (9508624, 9509338), (9508624, 9509350)] 2021-10-25 09:33:40.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267005: ['FBtr0345957'] 2021-10-25 09:33:40.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267005 has a single transcript. 2021-10-25 09:33:40.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12719240, 12722354), (12722484, 12722558), (12724070, 12724205), (12724343, 12724764), (12724343, 12724471), (12724618, 12725711), (12724911, 12725711), (12725796, 12725858), (12726678, 12726745), (12727116, 12736035), (12727116, 12729930), (12727116, 12730842), (12727116, 12728020), (12727116, 12736592), (12727116, 12728577), (12727116, 12737397), (12727116, 12729184), (12728241, 12737958), (12728798, 12737958), (12729405, 12737958), (12730151, 12737958), (12731066, 12737958), (12736256, 12737958), (12736813, 12737958), (12737618, 12737958), (12738176, 12738240), (12738747, 12738806), (12739188, 12743979), (12739188, 12766231)] 2021-10-25 09:33:40.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267006: ['FBtr0345956'] 2021-10-25 09:33:40.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267006 has a single transcript. 2021-10-25 09:33:40.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267007: ['FBtr0345955'] 2021-10-25 09:33:40.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267007 has a single transcript. 2021-10-25 09:33:40.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027356: ['FBtr0087828', 'FBtr0333099', 'FBtr0333100'] 2021-10-25 09:33:40.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267008: ['FBtr0345958'] 2021-10-25 09:33:40.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267008 has a single transcript. 2021-10-25 09:33:40.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267009: ['FBtr0345960'] 2021-10-25 09:33:40.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267009 has a single transcript. 2021-10-25 09:33:40.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001224: ['FBtr0076453', 'FBtr0309504'] 2021-10-25 09:33:40.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267010: ['FBtr0345961'] 2021-10-25 09:33:40.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267010 has a single transcript. 2021-10-25 09:33:40.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9125940, 9126769), (9125940, 9126880), (9125940, 9126760), (9127466, 9154658), (9127466, 9135117), (9127466, 9148754), (9135384, 9148754), (9135384, 9154658), (9148799, 9154658), (9151440, 9154658), (9154765, 9156497), (9156594, 9161130), (9156594, 9161384), (9161268, 9161384), (9162012, 9162075), (9162308, 9162362), (9162708, 9163294), (9162708, 9163140)] 2021-10-25 09:33:40.215 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9162075, 9162708, 'FBtr0110960_exon_6') contains intron (9162308, 9162362) 2021-10-25 09:33:40.217 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9162075, 9162708, 'FBtr0330219_exon_6') contains intron (9162308, 9162362) 2021-10-25 09:33:40.217 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9162075, 9162708, 'FBtr0301039_exon_8') contains intron (9162308, 9162362) 2021-10-25 09:33:40.218 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9162075, 9162708, 'FBtr0301040_exon_9') contains intron (9162308, 9162362) 2021-10-25 09:33:40.218 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110960_exon_6', 'FBtr0330219_exon_6', 'FBtr0301039_exon_8', 'FBtr0301040_exon_9'] 2021-10-25 09:33:40.219 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267011: ['FBtr0345962'] 2021-10-25 09:33:40.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267011 has a single transcript. 2021-10-25 09:33:40.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036009: ['FBtr0076375'] 2021-10-25 09:33:40.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036009 has a single transcript. 2021-10-25 09:33:40.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039385: ['FBtr0084938'] 2021-10-25 09:33:40.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039385 has a single transcript. 2021-10-25 09:33:40.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267012: ['FBtr0345963'] 2021-10-25 09:33:40.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267012 has a single transcript. 2021-10-25 09:33:40.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036010: ['FBtr0336953'] 2021-10-25 09:33:40.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036010 has a single transcript. 2021-10-25 09:33:40.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039386: ['FBtr0084939', 'FBtr0309040'] 2021-10-25 09:33:40.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036014: ['FBtr0076379'] 2021-10-25 09:33:40.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036014 has a single transcript. 2021-10-25 09:33:40.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267013: ['FBtr0345964'] 2021-10-25 09:33:40.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267013 has a single transcript. 2021-10-25 09:33:40.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036015: ['FBtr0076421'] 2021-10-25 09:33:40.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036015 has a single transcript. 2021-10-25 09:33:40.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267014: ['FBtr0345971'] 2021-10-25 09:33:40.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267014 has a single transcript. 2021-10-25 09:33:40.252 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12594068, 12606914), (12607050, 12607123), (12607314, 12607377), (12607482, 12607543), (12607714, 12607915), (12607997, 12608055), (12608178, 12609228), (12608178, 12610578), (12608178, 12609168), (12609636, 12610578), (12609876, 12610578), (12610721, 12611008), (12610721, 12610987)] 2021-10-25 09:33:40.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:40.253 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036016: ['FBtr0076380'] 2021-10-25 09:33:40.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036016 has a single transcript. 2021-10-25 09:33:40.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267015: ['FBtr0345970'] 2021-10-25 09:33:40.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267015 has a single transcript. 2021-10-25 09:33:40.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267016: ['FBtr0345972'] 2021-10-25 09:33:40.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267016 has a single transcript. 2021-10-25 09:33:40.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036018: ['FBtr0076383'] 2021-10-25 09:33:40.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036018 has a single transcript. 2021-10-25 09:33:40.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25896140, 25896478), (25896140, 25896481), (25896703, 25896767)] 2021-10-25 09:33:40.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267017: ['FBtr0345973'] 2021-10-25 09:33:40.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267017 has a single transcript. 2021-10-25 09:33:40.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036019: ['FBtr0076420'] 2021-10-25 09:33:40.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036019 has a single transcript. 2021-10-25 09:33:40.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267018: ['FBtr0345974'] 2021-10-25 09:33:40.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267018 has a single transcript. 2021-10-25 09:33:40.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267019: ['FBtr0345975'] 2021-10-25 09:33:40.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267019 has a single transcript. 2021-10-25 09:33:40.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036020: ['FBtr0076384', 'FBtr0076385', 'FBtr0076386', 'FBtr0333855'] 2021-10-25 09:33:40.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267020: ['FBtr0345959'] 2021-10-25 09:33:40.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267020 has a single transcript. 2021-10-25 09:33:40.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267021: ['FBtr0345965', 'FBtr0345966'] 2021-10-25 09:33:40.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001225: ['FBtr0076496', 'FBtr0346539'] 2021-10-25 09:33:40.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039387: ['FBtr0084940'] 2021-10-25 09:33:40.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039387 has a single transcript. 2021-10-25 09:33:40.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039395: ['FBtr0084984'] 2021-10-25 09:33:40.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039395 has a single transcript. 2021-10-25 09:33:40.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039396: ['FBtr0304043'] 2021-10-25 09:33:40.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039396 has a single transcript. 2021-10-25 09:33:40.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:40.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039398: ['FBtr0084948'] 2021-10-25 09:33:40.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039398 has a single transcript. 2021-10-25 09:33:40.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:40.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027358: ['FBtr0074767', 'FBtr0344072'] 2021-10-25 09:33:40.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039402: ['FBtr0084967'] 2021-10-25 09:33:40.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039402 has a single transcript. 2021-10-25 09:33:40.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039403: ['FBtr0084975'] 2021-10-25 09:33:40.376 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039403 has a single transcript. 2021-10-25 09:33:40.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039404: ['FBtr0084968'] 2021-10-25 09:33:40.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039404 has a single transcript. 2021-10-25 09:33:40.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9628820, 9630061), (9630103, 9630158), (9630302, 9630379), (9630624, 9630817), (9631138, 9631192)] 2021-10-25 09:33:40.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9630061, 9630302, 'FBtr0076384_exon_2') contains intron (9630103, 9630158) 2021-10-25 09:33:40.385 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9630076, 9630302, 'FBtr0333855_exon_1') contains intron (9630103, 9630158) 2021-10-25 09:33:40.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076384_exon_2', 'FBtr0333855_exon_1'] 2021-10-25 09:33:40.385 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039405: ['FBtr0084974'] 2021-10-25 09:33:40.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039405 has a single transcript. 2021-10-25 09:33:40.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039406: ['FBtr0084972', 'FBtr0084973', 'FBtr0302369'] 2021-10-25 09:33:40.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260935: ['FBtr0081986', 'FBtr0301246', 'FBtr0333666'] 2021-10-25 09:33:40.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267022: ['FBtr0345968', 'FBtr0345969'] 2021-10-25 09:33:40.412 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19618187, 19618249), (19618345, 19618404)] 2021-10-25 09:33:40.413 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001226: ['FBtr0076454', 'FBtr0346541'] 2021-10-25 09:33:40.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:40.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:40.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.479 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9241082, 9241146), (9241761, 9241818), (9242452, 9242832), (9242700, 9242832), (9243046, 9243101), (9244112, 9244176), (9245214, 9245407), (9245594, 9245655)] 2021-10-25 09:33:40.480 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9242529, 9243046, 'FBtr0301246_exon_5') contains intron (9242700, 9242832) 2021-10-25 09:33:40.480 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301246_exon_5'] 2021-10-25 09:33:40.480 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027359: ['FBtr0073482', 'FBtr0343640'] 2021-10-25 09:33:40.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26058917, 26058979), (26059051, 26059234), (26059054, 26059234), (26059054, 26059219)] 2021-10-25 09:33:40.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267023: ['FBtr0345976'] 2021-10-25 09:33:40.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267023 has a single transcript. 2021-10-25 09:33:40.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11368625, 11368703)] 2021-10-25 09:33:40.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267024: ['FBtr0345977'] 2021-10-25 09:33:40.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001227: ['FBtr0076495'] 2021-10-25 09:33:40.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267024 has a single transcript. 2021-10-25 09:33:40.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001227 has a single transcript. 2021-10-25 09:33:40.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052983: ['FBtr0079737'] 2021-10-25 09:33:40.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052983 has a single transcript. 2021-10-25 09:33:40.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036022: ['FBtr0076387'] 2021-10-25 09:33:40.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036022 has a single transcript. 2021-10-25 09:33:40.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267025: ['FBtr0345978'] 2021-10-25 09:33:40.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267025 has a single transcript. 2021-10-25 09:33:40.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001228: ['FBtr0100653', 'FBtr0100655', 'FBtr0303473', 'FBtr0303474'] 2021-10-25 09:33:40.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052984: ['FBtr0079758'] 2021-10-25 09:33:40.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052984 has a single transcript. 2021-10-25 09:33:40.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036023: ['FBtr0076388'] 2021-10-25 09:33:40.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036023 has a single transcript. 2021-10-25 09:33:40.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267026: ['FBtr0345979'] 2021-10-25 09:33:40.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267026 has a single transcript. 2021-10-25 09:33:40.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052985: ['FBtr0079757'] 2021-10-25 09:33:40.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052985 has a single transcript. 2021-10-25 09:33:40.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036024: ['FBtr0076389'] 2021-10-25 09:33:40.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036024 has a single transcript. 2021-10-25 09:33:40.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267027: ['FBtr0345980'] 2021-10-25 09:33:40.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267027 has a single transcript. 2021-10-25 09:33:40.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052986: ['FBtr0079734'] 2021-10-25 09:33:40.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052986 has a single transcript. 2021-10-25 09:33:40.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267028: ['FBtr0345990'] 2021-10-25 09:33:40.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267028 has a single transcript. 2021-10-25 09:33:40.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036028: ['FBtr0076392'] 2021-10-25 09:33:40.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036028 has a single transcript. 2021-10-25 09:33:40.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052987: ['FBtr0079735'] 2021-10-25 09:33:40.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052987 has a single transcript. 2021-10-25 09:33:40.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036029: ['FBtr0076394'] 2021-10-25 09:33:40.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036029 has a single transcript. 2021-10-25 09:33:40.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267029: ['FBtr0345995', 'FBtr0345996', 'FBtr0345997'] 2021-10-25 09:33:40.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0052988: ['FBtr0079736'] 2021-10-25 09:33:40.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0052988 has a single transcript. 2021-10-25 09:33:40.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036030: ['FBtr0076415', 'FBtr0076416', 'FBtr0345032', 'FBtr0345033', 'FBtr0345034', 'FBtr0310662', 'FBtr0310663', 'FBtr0333856', 'FBtr0333857'] 2021-10-25 09:33:40.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027360: ['FBtr0071677', 'FBtr0071676'] 2021-10-25 09:33:40.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053002: ['FBtr0077451', 'FBtr0335135', 'FBtr0345633'] 2021-10-25 09:33:40.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039407: ['FBtr0084969', 'FBtr0346731'] 2021-10-25 09:33:40.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260936: ['FBtr0077100', 'FBtr0077101', 'FBtr0077103', 'FBtr0330127', 'FBtr0330128', 'FBtr0307975', 'FBtr0307976'] 2021-10-25 09:33:40.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9372839, 9372909), (9373095, 9373161), (9373321, 9373389)] 2021-10-25 09:33:40.618 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9372721, 9373095, 'FBtr0303474_exon_1') contains intron (9372839, 9372909) 2021-10-25 09:33:40.618 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303474_exon_1'] 2021-10-25 09:33:40.618 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21690474, 21690637), (21691000, 21691071)] 2021-10-25 09:33:40.629 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21690637, 21691139, 'FBtr0071677_exon_1') contains intron (21691000, 21691071) 2021-10-25 09:33:40.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071677_exon_1'] 2021-10-25 09:33:40.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(141155, 141215), (141256, 141314), (141435, 141831), (141524, 141831)] 2021-10-25 09:33:40.629 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (140972, 142197, 'FBtr0345995_exon_1') contains intron (141155, 141215) 2021-10-25 09:33:40.630 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345995_exon_1'] 2021-10-25 09:33:40.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26059748, 26059802), (26060261, 26060936)] 2021-10-25 09:33:40.648 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.648 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4459207, 4459265), (4459429, 4459483)] 2021-10-25 09:33:40.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027363: ['FBtr0080143'] 2021-10-25 09:33:40.694 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027363 has a single transcript. 2021-10-25 09:33:40.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027364: ['FBtr0078274', 'FBtr0078275'] 2021-10-25 09:33:40.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039408: ['FBtr0084971', 'FBtr0337058'] 2021-10-25 09:33:40.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267030: ['FBtr0345998'] 2021-10-25 09:33:40.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267030 has a single transcript. 2021-10-25 09:33:40.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267031: ['FBtr0345999'] 2021-10-25 09:33:40.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267031 has a single transcript. 2021-10-25 09:33:40.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267032: ['FBtr0346000'] 2021-10-25 09:33:40.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267032 has a single transcript. 2021-10-25 09:33:40.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20789171, 20790135), (20790653, 20790719), (20791114, 20792127)] 2021-10-25 09:33:40.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26061648, 26061960)] 2021-10-25 09:33:40.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5769933, 5771617), (5771371, 5771617), (5772375, 5772432), (5774076, 5775188), (5774076, 5774413), (5774846, 5775188), (5775013, 5775188)] 2021-10-25 09:33:40.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053003: ['FBtr0077434', 'FBtr0290071'] 2021-10-25 09:33:40.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5771164, 5772375, 'FBtr0077101_exon_1') contains intron (5771371, 5771617) 2021-10-25 09:33:40.765 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5771164, 5772375, 'FBtr0330128_exon_1') contains intron (5771371, 5771617) 2021-10-25 09:33:40.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077101_exon_1', 'FBtr0330128_exon_1'] 2021-10-25 09:33:40.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001229: ['FBtr0076497'] 2021-10-25 09:33:40.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001229 has a single transcript. 2021-10-25 09:33:40.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267033: ['FBtr0346001', 'FBtr0346002', 'FBtr0346003', 'FBtr0346004', 'FBtr0346005', 'FBtr0346006', 'FBtr0346007'] 2021-10-25 09:33:40.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001230: ['FBtr0084589'] 2021-10-25 09:33:40.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001230 has a single transcript. 2021-10-25 09:33:40.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001233: ['FBtr0073040', 'FBtr0332873'] 2021-10-25 09:33:40.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9684458, 9684521), (9684855, 9684920), (9685045, 9686364), (9686463, 9688530), (9686463, 9689264), (9686463, 9687229), (9686475, 9689264), (9687253, 9689264), (9688599, 9689264), (9689448, 9694232), (9694458, 9696538), (9694458, 9695195)] 2021-10-25 09:33:40.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4401289, 4401349), (4401693, 4401865), (4401768, 4401865)] 2021-10-25 09:33:40.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027375: ['FBtr0075714', 'FBtr0075715', 'FBtr0100362'] 2021-10-25 09:33:40.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039411: ['FBtr0113293', 'FBtr0113294', 'FBtr0300618'] 2021-10-25 09:33:40.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3193367, 3194498)] 2021-10-25 09:33:40.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:40.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053012: ['FBtr0332249'] 2021-10-25 09:33:40.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053012 has a single transcript. 2021-10-25 09:33:40.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053013: ['FBtr0334031'] 2021-10-25 09:33:40.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053013 has a single transcript. 2021-10-25 09:33:40.886 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26077235, 26077471), (26078682, 26078807), (26078961, 26079366), (26079473, 26079551), (26079736, 26081891), (26082191, 26084071), (26084161, 26085109), (26085180, 26088165), (26088347, 26096188), (26096567, 26098022), (26096567, 26098075)] 2021-10-25 09:33:40.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26076591, 26078682, 'FBtr0113294_exon_10') contains intron (26077235, 26077471) 2021-10-25 09:33:40.887 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113294_exon_10'] 2021-10-25 09:33:40.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.887 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14628404, 14628462), (14629681, 14629740), (14630192, 14630519), (14630444, 14630519), (14631818, 14631880)] 2021-10-25 09:33:40.887 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14629740, 14631818, 'FBtr0075714_exon_2') contains intron (14630192, 14630519) 2021-10-25 09:33:40.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075714_exon_2'] 2021-10-25 09:33:40.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053017: ['FBtr0087135', 'FBtr0344885', 'FBtr0345872'] 2021-10-25 09:33:40.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001234: ['FBtr0084057', 'FBtr0084058', 'FBtr0084059', 'FBtr0309958', 'FBtr0332373', 'FBtr0334316', 'FBtr0346801'] 2021-10-25 09:33:40.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13854372, 13854651), (13855118, 13855234), (13856759, 13856981), (13857148, 13883235), (13869705, 13870319), (13870403, 13870469), (13871268, 13883235), (13883364, 13883458), (13885225, 13885308), (13885500, 13901482), (13901643, 13967269), (13901643, 13914629), (13901643, 13932481), (13915349, 13946949), (13968073, 13985213), (13986074, 13986370), (13986074, 13988544), (13986074, 13990469)] 2021-10-25 09:33:40.948 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13870319, 13871268, 'FBtr0346005_exon_7') contains intron (13870403, 13870469) 2021-10-25 09:33:40.949 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13870319, 13871268, 'FBtr0346006_exon_8') contains intron (13870403, 13870469) 2021-10-25 09:33:40.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346005_exon_7', 'FBtr0346006_exon_8'] 2021-10-25 09:33:40.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16272641, 16272704), (16276536, 16276589)] 2021-10-25 09:33:40.968 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16272704, 16277335, 'FBtr0087135_exon_2') contains intron (16276536, 16276589) 2021-10-25 09:33:40.968 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16272704, 16277655, 'FBtr0345872_exon_2') contains intron (16276536, 16276589) 2021-10-25 09:33:40.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087135_exon_2', 'FBtr0345872_exon_2'] 2021-10-25 09:33:40.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:40.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039413: ['FBtr0273389'] 2021-10-25 09:33:40.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039413 has a single transcript. 2021-10-25 09:33:40.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027376: ['FBtr0084832'] 2021-10-25 09:33:40.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027376 has a single transcript. 2021-10-25 09:33:40.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032457: ['FBtr0080402'] 2021-10-25 09:33:40.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032457 has a single transcript. 2021-10-25 09:33:41.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039415: ['FBtr0084987'] 2021-10-25 09:33:41.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039415 has a single transcript. 2021-10-25 09:33:41.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032462: ['FBtr0273445'] 2021-10-25 09:33:41.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032462 has a single transcript. 2021-10-25 09:33:41.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027378: ['FBtr0083125', 'FBtr0333921'] 2021-10-25 09:33:41.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032464: ['FBtr0080421'] 2021-10-25 09:33:41.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032464 has a single transcript. 2021-10-25 09:33:41.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039417: ['FBtr0085003', 'FBtr0307342'] 2021-10-25 09:33:41.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032465: ['FBtr0080430'] 2021-10-25 09:33:41.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032465 has a single transcript. 2021-10-25 09:33:41.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032467: ['FBtr0080428', 'FBtr0301247'] 2021-10-25 09:33:41.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15277555, 15277613), (15277570, 15277613), (15277729, 15277785), (15277900, 15277960)] 2021-10-25 09:33:41.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26187714, 26187770), (26188274, 26188331), (26188519, 26188632)] 2021-10-25 09:33:41.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21297097, 21297809)] 2021-10-25 09:33:41.057 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21296620, 21310706, 'FBtr0084058_exon_1') contains intron (21297097, 21297809) 2021-10-25 09:33:41.057 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21296620, 21298508, 'FBtr0084059_exon_1') contains intron (21297097, 21297809) 2021-10-25 09:33:41.057 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21296620, 21317836, 'FBtr0332373_exon_1') contains intron (21297097, 21297809) 2021-10-25 09:33:41.057 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21296620, 21299396, 'FBtr0346801_exon_1') contains intron (21297097, 21297809) 2021-10-25 09:33:41.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084058_exon_1', 'FBtr0084059_exon_1', 'FBtr0332373_exon_1', 'FBtr0346801_exon_1'] 2021-10-25 09:33:41.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053051: ['FBtr0075230'] 2021-10-25 09:33:41.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053051 has a single transcript. 2021-10-25 09:33:41.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13013883, 13013948), (13014291, 13014350), (13014675, 13014925), (13015038, 13015103), (13015500, 13015614), (13016186, 13016254), (13017661, 13017828), (13018174, 13018789), (13018177, 13018789)] 2021-10-25 09:33:41.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053052: ['FBtr0075229'] 2021-10-25 09:33:41.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053052 has a single transcript. 2021-10-25 09:33:41.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260938: ['FBtr0340414', 'FBtr0310065', 'FBtr0310066', 'FBtr0074167'] 2021-10-25 09:33:41.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053054: ['FBtr0078316', 'FBtr0078317'] 2021-10-25 09:33:41.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027453: ['FBtr0080181'] 2021-10-25 09:33:41.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027453 has a single transcript. 2021-10-25 09:33:41.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039419: ['FBtr0084990', 'FBtr0339612'] 2021-10-25 09:33:41.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027490: ['FBtr0079707'] 2021-10-25 09:33:41.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027490 has a single transcript. 2021-10-25 09:33:41.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032470: ['FBtr0301366', 'FBtr0336855'] 2021-10-25 09:33:41.123 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21197490, 21197548), (21197637, 21197759), (21198103, 21202747)] 2021-10-25 09:33:41.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21197410, 21197637, 'FBtr0078317_exon_3') contains intron (21197490, 21197548) 2021-10-25 09:33:41.124 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078317_exon_3'] 2021-10-25 09:33:41.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027491: ['FBtr0080063', 'FBtr0331670'] 2021-10-25 09:33:41.156 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:41.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10308475, 10308547), (10308753, 10308812), (10308950, 10309371), (10310309, 10310543)] 2021-10-25 09:33:41.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13106944, 13107001), (13107180, 13107280), (13108282, 13108415), (13108626, 13108893)] 2021-10-25 09:33:41.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15878471, 15878596), (15878684, 15878749), (15879188, 15879265), (15879666, 15879739), (15880221, 15880287), (15880485, 15880547), (15882109, 15882174), (15882591, 15883008), (15883035, 15883091), (15883133, 15883193), (15883364, 15883432), (15883367, 15883432), (15884374, 15884442), (15885943, 15887037), (15885943, 15887117), (15885943, 15887012)] 2021-10-25 09:33:41.174 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053056: ['FBtr0078311', 'FBtr0078312', 'FBtr0078313', 'FBtr0078314', 'FBtr0078315'] 2021-10-25 09:33:41.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036031: ['FBtr0076414', 'FBtr0331543'] 2021-10-25 09:33:41.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032471: ['FBtr0080431'] 2021-10-25 09:33:41.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032471 has a single transcript. 2021-10-25 09:33:41.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039420: ['FBtr0300398', 'FBtr0300399'] 2021-10-25 09:33:41.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027492: ['FBtr0085203', 'FBtr0085204', 'FBtr0085207', 'FBtr0085208', 'FBtr0085209', 'FBtr0085205'] 2021-10-25 09:33:41.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9701052, 9701113), (9701339, 9701392), (9701630, 9701690), (9702630, 9702681)] 2021-10-25 09:33:41.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032472: ['FBtr0080496', 'FBtr0345616'] 2021-10-25 09:33:41.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267034: ['FBtr0346008'] 2021-10-25 09:33:41.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267034 has a single transcript. 2021-10-25 09:33:41.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267035: ['FBtr0346009'] 2021-10-25 09:33:41.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267035 has a single transcript. 2021-10-25 09:33:41.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267036: ['FBtr0346010'] 2021-10-25 09:33:41.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267036 has a single transcript. 2021-10-25 09:33:41.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267037: ['FBtr0346011'] 2021-10-25 09:33:41.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267037 has a single transcript. 2021-10-25 09:33:41.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267038: ['FBtr0346012'] 2021-10-25 09:33:41.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267038 has a single transcript. 2021-10-25 09:33:41.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267039: ['FBtr0346013'] 2021-10-25 09:33:41.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267039 has a single transcript. 2021-10-25 09:33:41.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26262986, 26268373), (26268307, 26268373), (26269101, 26269173), (26269243, 26269309), (26269486, 26269564), (26269649, 26269739), (26269815, 26269949), (26270088, 26274775)] 2021-10-25 09:33:41.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:41.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267040: ['FBtr0347473', 'FBtr0346020'] 2021-10-25 09:33:41.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036032: ['FBtr0076396', 'FBtr0330098'] 2021-10-25 09:33:41.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21198728, 21198880), (21199183, 21199245), (21199335, 21199994), (21199404, 21199994), (21200341, 21200407), (21200514, 21202747), (21200514, 21203077), (21200514, 21200624)] 2021-10-25 09:33:41.290 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21199994, 21200514, 'FBtr0078311_exon_2') contains intron (21200341, 21200407) 2021-10-25 09:33:41.291 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21200407, 21200688, 'FBtr0078313_exon_1') contains intron (21200514, 21200624) 2021-10-25 09:33:41.291 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21200407, 21200688, 'FBtr0078314_exon_1') contains intron (21200514, 21200624) 2021-10-25 09:33:41.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078311_exon_2', 'FBtr0078313_exon_1', 'FBtr0078314_exon_1'] 2021-10-25 09:33:41.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260940: ['FBtr0084135'] 2021-10-25 09:33:41.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260940 has a single transcript. 2021-10-25 09:33:41.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9708468, 9708537)] 2021-10-25 09:33:41.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032473: ['FBtr0080433'] 2021-10-25 09:33:41.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032473 has a single transcript. 2021-10-25 09:33:41.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4374017, 4374084), (4374199, 4375480), (4376571, 4376674)] 2021-10-25 09:33:41.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039421: ['FBtr0085027'] 2021-10-25 09:33:41.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039421 has a single transcript. 2021-10-25 09:33:41.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032474: ['FBtr0080493', 'FBtr0080494', 'FBtr0329989'] 2021-10-25 09:33:41.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260941: ['FBtr0339925', 'FBtr0301052', 'FBtr0301053', 'FBtr0301054', 'FBtr0301055', 'FBtr0301056', 'FBtr0301057', 'FBtr0304661', 'FBtr0334102', 'FBtr0334103'] 2021-10-25 09:33:41.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039424: ['FBtr0113295'] 2021-10-25 09:33:41.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039424 has a single transcript. 2021-10-25 09:33:41.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27565854, 27565917), (27566147, 27566206), (27566540, 27566604), (27566795, 27566860), (27567055, 27567151), (27567351, 27567415), (27568205, 27568278), (27568591, 27581680), (27568591, 27582001), (27568591, 27580156), (27568591, 27581143), (27568591, 27581588), (27580325, 27581143), (27580325, 27582001)] 2021-10-25 09:33:41.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001235: ['FBtr0082256', 'FBtr0082255', 'FBtr0100454', 'FBtr0100455', 'FBtr0344145'] 2021-10-25 09:33:41.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039425: ['FBtr0085006', 'FBtr0306708'] 2021-10-25 09:33:41.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036035: ['FBtr0076412', 'FBtr0331542'] 2021-10-25 09:33:41.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267041: ['FBtr0346058'] 2021-10-25 09:33:41.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267041 has a single transcript. 2021-10-25 09:33:41.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267042: ['FBtr0346035'] 2021-10-25 09:33:41.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267042 has a single transcript. 2021-10-25 09:33:41.408 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13164203, 13164315), (13164762, 13164824), (13164923, 13165475)] 2021-10-25 09:33:41.409 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.409 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26414930, 26414989), (26415189, 26415252), (26415952, 26416013)] 2021-10-25 09:33:41.410 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26415252, 26416192, 'FBtr0085006_exon_3') contains intron (26415952, 26416013) 2021-10-25 09:33:41.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085006_exon_3'] 2021-10-25 09:33:41.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267043: ['FBtr0346034'] 2021-10-25 09:33:41.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267043 has a single transcript. 2021-10-25 09:33:41.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267044: ['FBtr0346033'] 2021-10-25 09:33:41.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267044 has a single transcript. 2021-10-25 09:33:41.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267045: ['FBtr0346032'] 2021-10-25 09:33:41.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267045 has a single transcript. 2021-10-25 09:33:41.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9719066, 9719115)] 2021-10-25 09:33:41.435 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267046: ['FBtr0346031'] 2021-10-25 09:33:41.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267046 has a single transcript. 2021-10-25 09:33:41.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267047: ['FBtr0346030'] 2021-10-25 09:33:41.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267047 has a single transcript. 2021-10-25 09:33:41.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267048: ['FBtr0346029'] 2021-10-25 09:33:41.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267048 has a single transcript. 2021-10-25 09:33:41.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267049: ['FBtr0346028'] 2021-10-25 09:33:41.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267049 has a single transcript. 2021-10-25 09:33:41.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267050: ['FBtr0346027'] 2021-10-25 09:33:41.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267050 has a single transcript. 2021-10-25 09:33:41.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039427: ['FBtr0085012', 'FBtr0330152'] 2021-10-25 09:33:41.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267051: ['FBtr0346022'] 2021-10-25 09:33:41.477 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10511537, 10511758), (10511817, 10514267), (10514344, 10521071), (10521220, 10529438), (10529462, 10533910), (10534006, 10548651), (10534006, 10548606), (10548654, 10561908), (10562032, 10585742), (10583873, 10585742), (10585928, 10591408), (10591459, 10593550), (10593601, 10602791), (10602933, 10605087), (10605368, 10612984), (10613800, 10638623)] 2021-10-25 09:33:41.477 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267051 has a single transcript. 2021-10-25 09:33:41.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053057: ['FBtr0076678', 'FBtr0344802'] 2021-10-25 09:33:41.478 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10581405, 10585928, 'FBtr0344145_exon_6') contains intron (10583873, 10585742) 2021-10-25 09:33:41.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344145_exon_6'] 2021-10-25 09:33:41.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267052: ['FBtr0346023'] 2021-10-25 09:33:41.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267052 has a single transcript. 2021-10-25 09:33:41.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267053: ['FBtr0346024'] 2021-10-25 09:33:41.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267053 has a single transcript. 2021-10-25 09:33:41.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267054: ['FBtr0346025'] 2021-10-25 09:33:41.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267054 has a single transcript. 2021-10-25 09:33:41.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036036: ['FBtr0076402'] 2021-10-25 09:33:41.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036036 has a single transcript. 2021-10-25 09:33:41.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267055: ['FBtr0346036'] 2021-10-25 09:33:41.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267055 has a single transcript. 2021-10-25 09:33:41.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032475: ['FBtr0080491', 'FBtr0080492', 'FBtr0289981', 'FBtr0333236'] 2021-10-25 09:33:41.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036038: ['FBtr0076403'] 2021-10-25 09:33:41.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036038 has a single transcript. 2021-10-25 09:33:41.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267056: ['FBtr0346039'] 2021-10-25 09:33:41.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267056 has a single transcript. 2021-10-25 09:33:41.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26452657, 26452853), (26453022, 26453088), (26453241, 26453568), (26453908, 26453979)] 2021-10-25 09:33:41.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.523 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8404050, 8404102)] 2021-10-25 09:33:41.526 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8402167, 8405277, 'FBtr0076678_exon_1') contains intron (8404050, 8404102) 2021-10-25 09:33:41.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076678_exon_1'] 2021-10-25 09:33:41.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036039: ['FBtr0089410', 'FBtr0089411', 'FBtr0114566'] 2021-10-25 09:33:41.530 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085012': ['FBtr0330152']} 2021-10-25 09:33:41.531 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330152']] 2021-10-25 09:33:41.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267057: ['FBtr0346043'] 2021-10-25 09:33:41.532 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267057 has a single transcript. 2021-10-25 09:33:41.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039428: ['FBtr0330153'] 2021-10-25 09:33:41.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039428 has a single transcript. 2021-10-25 09:33:41.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267058: ['FBtr0346044'] 2021-10-25 09:33:41.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267058 has a single transcript. 2021-10-25 09:33:41.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039429: ['FBtr0085014'] 2021-10-25 09:33:41.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039429 has a single transcript. 2021-10-25 09:33:41.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267059: ['FBtr0346045'] 2021-10-25 09:33:41.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267059 has a single transcript. 2021-10-25 09:33:41.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267060: ['FBtr0346047'] 2021-10-25 09:33:41.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267060 has a single transcript. 2021-10-25 09:33:41.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039430: ['FBtr0085015', 'FBtr0085016'] 2021-10-25 09:33:41.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267061: ['FBtr0346046'] 2021-10-25 09:33:41.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267061 has a single transcript. 2021-10-25 09:33:41.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053060: ['FBtr0305307'] 2021-10-25 09:33:41.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053060 has a single transcript. 2021-10-25 09:33:41.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267062: ['FBtr0346048'] 2021-10-25 09:33:41.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267062 has a single transcript. 2021-10-25 09:33:41.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12207937, 12212652), (12207937, 12213092), (12212767, 12213092), (12213297, 12213353), (12213475, 12213718), (12213873, 12213939), (12214051, 12214180), (12214051, 12215617), (12215802, 12216418), (12216579, 12219977), (12221282, 12264620), (12221282, 12224179), (12221282, 12240652), (12240674, 12264620), (12264910, 12265591), (12264910, 12266654)] 2021-10-25 09:33:41.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053061: ['FBtr0113448', 'FBtr0310460'] 2021-10-25 09:33:41.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.590 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027493: ['FBtr0083991'] 2021-10-25 09:33:41.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027493 has a single transcript. 2021-10-25 09:33:41.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267063: ['FBtr0346050'] 2021-10-25 09:33:41.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267063 has a single transcript. 2021-10-25 09:33:41.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027494: ['FBtr0085194'] 2021-10-25 09:33:41.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027494 has a single transcript. 2021-10-25 09:33:41.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9727569, 9727786), (9727907, 9727984), (9728149, 9728212), (9728433, 9728503), (9728614, 9728712)] 2021-10-25 09:33:41.602 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9727984, 9728433, 'FBtr0089411_exon_3') contains intron (9728149, 9728212) 2021-10-25 09:33:41.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089411_exon_3'] 2021-10-25 09:33:41.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267064: ['FBtr0346049'] 2021-10-25 09:33:41.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267064 has a single transcript. 2021-10-25 09:33:41.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13170784, 13171381), (13170784, 13171312), (13171665, 13171738), (13172250, 13172315), (13172565, 13172642), (13173941, 13174438), (13173941, 13175666), (13175276, 13175666), (13175952, 13176222), (13175952, 13176613)] 2021-10-25 09:33:41.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027495: ['FBtr0087983'] 2021-10-25 09:33:41.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027495 has a single transcript. 2021-10-25 09:33:41.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267065: ['FBtr0346053'] 2021-10-25 09:33:41.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267065 has a single transcript. 2021-10-25 09:33:41.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027496: ['FBtr0079261'] 2021-10-25 09:33:41.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027496 has a single transcript. 2021-10-25 09:33:41.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267066: ['FBtr0346052'] 2021-10-25 09:33:41.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267066 has a single transcript. 2021-10-25 09:33:41.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267067: ['FBtr0346051'] 2021-10-25 09:33:41.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267067 has a single transcript. 2021-10-25 09:33:41.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26461646, 26466584), (26465651, 26466584), (26467070, 26467131), (26467346, 26467543), (26468087, 26468145), (26468798, 26468856), (26469003, 26469283)] 2021-10-25 09:33:41.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027497: ['FBtr0078722', 'FBtr0347493'] 2021-10-25 09:33:41.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267068: ['FBtr0346067'] 2021-10-25 09:33:41.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267068 has a single transcript. 2021-10-25 09:33:41.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16330144, 16330249), (16330144, 16330229), (16330522, 16330582)] 2021-10-25 09:33:41.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267069: ['FBtr0346066'] 2021-10-25 09:33:41.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267069 has a single transcript. 2021-10-25 09:33:41.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267070: ['FBtr0346065'] 2021-10-25 09:33:41.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267070 has a single transcript. 2021-10-25 09:33:41.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267071: ['FBtr0346021'] 2021-10-25 09:33:41.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267071 has a single transcript. 2021-10-25 09:33:41.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267072: ['FBtr0346038'] 2021-10-25 09:33:41.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267072 has a single transcript. 2021-10-25 09:33:41.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5744115, 5744967)] 2021-10-25 09:33:41.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267073: ['FBtr0346054'] 2021-10-25 09:33:41.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267073 has a single transcript. 2021-10-25 09:33:41.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267074: ['FBtr0346056'] 2021-10-25 09:33:41.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267074 has a single transcript. 2021-10-25 09:33:41.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001247: ['FBtr0273273'] 2021-10-25 09:33:41.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001247 has a single transcript. 2021-10-25 09:33:41.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039431: ['FBtr0344120', 'FBtr0302209', 'FBtr0302210', 'FBtr0305049'] 2021-10-25 09:33:41.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267075: ['FBtr0346055'] 2021-10-25 09:33:41.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267075 has a single transcript. 2021-10-25 09:33:41.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053062: ['FBtr0302886', 'FBtr0302887'] 2021-10-25 09:33:41.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001248: ['FBtr0076667', 'FBtr0076668', 'FBtr0076669', 'FBtr0076670', 'FBtr0076671', 'FBtr0076673', 'FBtr0114548', 'FBtr0114549', 'FBtr0333058'] 2021-10-25 09:33:41.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036040: ['FBtr0076410'] 2021-10-25 09:33:41.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036040 has a single transcript. 2021-10-25 09:33:41.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267076: ['FBtr0346057'] 2021-10-25 09:33:41.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267076 has a single transcript. 2021-10-25 09:33:41.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267077: ['FBtr0346068'] 2021-10-25 09:33:41.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267077 has a single transcript. 2021-10-25 09:33:41.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027498: ['FBtr0073429', 'FBtr0073431', 'FBtr0332383'] 2021-10-25 09:33:41.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036043: ['FBtr0076325', 'FBtr0076326', 'FBtr0076327', 'FBtr0076317', 'FBtr0076318', 'FBtr0076319', 'FBtr0076320', 'FBtr0076321', 'FBtr0076322', 'FBtr0076323', 'FBtr0076324', 'FBtr0301228', 'FBtr0331848'] 2021-10-25 09:33:41.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267078: ['FBtr0346069'] 2021-10-25 09:33:41.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267078 has a single transcript. 2021-10-25 09:33:41.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032476: ['FBtr0080435'] 2021-10-25 09:33:41.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032476 has a single transcript. 2021-10-25 09:33:41.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267079: ['FBtr0346070', 'FBtr0445212'] 2021-10-25 09:33:41.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19441868, 19441938), (19442393, 19446034), (19446310, 19446392)] 2021-10-25 09:33:41.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032477: ['FBtr0080436'] 2021-10-25 09:33:41.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032477 has a single transcript. 2021-10-25 09:33:41.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032478: ['FBtr0080437'] 2021-10-25 09:33:41.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032478 has a single transcript. 2021-10-25 09:33:41.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032479: ['FBtr0080489', 'FBtr0305555'] 2021-10-25 09:33:41.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26474292, 26474347), (26474517, 26474573), (26474874, 26474972), (26475409, 26475472), (26476458, 26476922), (26476991, 26477149), (26477300, 26477381), (26477582, 26477648), (26477804, 26532112), (26532422, 26534953), (26532422, 26535158), (26532422, 26535007), (26532422, 26534723)] 2021-10-25 09:33:41.791 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.803 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15692069, 15692132)] 2021-10-25 09:33:41.804 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15691866, 15692597, 'FBtr0346070_exon_1') contains intron (15692069, 15692132) 2021-10-25 09:33:41.804 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346070_exon_1'] 2021-10-25 09:33:41.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11092623, 11092780), (11092718, 11092780), (11092841, 11092958)] 2021-10-25 09:33:41.812 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11092491, 11092841, 'FBtr0073431_exon_1') contains intron (11092623, 11092780) 2021-10-25 09:33:41.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073431_exon_1'] 2021-10-25 09:33:41.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053080: ['FBtr0070844', 'FBtr0070845', 'FBtr0342971', 'FBtr0342972'] 2021-10-25 09:33:41.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13186264, 13186332), (13186964, 13187032), (13187325, 13187572), (13189618, 13191903), (13189618, 13189691), (13189756, 13191903)] 2021-10-25 09:33:41.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267080: ['FBtr0346072'] 2021-10-25 09:33:41.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267080 has a single transcript. 2021-10-25 09:33:41.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267081: ['FBtr0346064'] 2021-10-25 09:33:41.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267081 has a single transcript. 2021-10-25 09:33:41.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267082: ['FBtr0346071'] 2021-10-25 09:33:41.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267082 has a single transcript. 2021-10-25 09:33:41.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267083: ['FBtr0346073'] 2021-10-25 09:33:41.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267083 has a single transcript. 2021-10-25 09:33:41.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032480: ['FBtr0080438', 'FBtr0333235'] 2021-10-25 09:33:41.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267084: ['FBtr0346080'] 2021-10-25 09:33:41.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267084 has a single transcript. 2021-10-25 09:33:41.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267085: ['FBtr0346081'] 2021-10-25 09:33:41.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267085 has a single transcript. 2021-10-25 09:33:41.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267086: ['FBtr0346084'] 2021-10-25 09:33:41.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267086 has a single transcript. 2021-10-25 09:33:41.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267087: ['FBtr0346094'] 2021-10-25 09:33:41.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5709043, 5709127), (5710973, 5711476), (5711572, 5711634), (5711803, 5714651), (5711803, 5713339), (5711803, 5713361), (5714812, 5717345), (5714812, 5715145)] 2021-10-25 09:33:41.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267087 has a single transcript. 2021-10-25 09:33:41.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8357905, 8360792), (8357905, 8358555), (8357905, 8358015), (8357935, 8360792), (8357935, 8358015), (8358072, 8358555), (8358715, 8360328), (8358715, 8358849), (8358715, 8360792)] 2021-10-25 09:33:41.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.917 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8358555, 8359079, 'FBtr0076669_exon_1') contains intron (8358715, 8358849) 2021-10-25 09:33:41.917 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8358555, 8358940, 'FBtr0076670_exon_1') contains intron (8358715, 8358849) 2021-10-25 09:33:41.918 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8358555, 8358940, 'FBtr0333058_exon_1') contains intron (8358715, 8358849) 2021-10-25 09:33:41.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076669_exon_1', 'FBtr0076670_exon_1', 'FBtr0333058_exon_1'] 2021-10-25 09:33:41.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027499: ['FBtr0088253', 'FBtr0339467'] 2021-10-25 09:33:41.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267088: ['FBtr0346102'] 2021-10-25 09:33:41.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267088 has a single transcript. 2021-10-25 09:33:41.932 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13192639, 13192712), (13193094, 13193470), (13193617, 13193672), (13194492, 13194564), (13194958, 13195132), (13195377, 13195580), (13195404, 13195580), (13195679, 13195749)] 2021-10-25 09:33:41.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267089: ['FBtr0346104'] 2021-10-25 09:33:41.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267089 has a single transcript. 2021-10-25 09:33:41.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267090: ['FBtr0346105'] 2021-10-25 09:33:41.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267090 has a single transcript. 2021-10-25 09:33:41.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039434: ['FBtr0085029'] 2021-10-25 09:33:41.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039434 has a single transcript. 2021-10-25 09:33:41.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267091: ['FBtr0346106'] 2021-10-25 09:33:41.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267091 has a single transcript. 2021-10-25 09:33:41.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039435: ['FBtr0085058'] 2021-10-25 09:33:41.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039435 has a single transcript. 2021-10-25 09:33:41.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10801171, 10801233), (10801658, 10802236), (10805513, 10805574), (10805727, 10808739), (10805727, 10806487)] 2021-10-25 09:33:41.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:41.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:41.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267096: ['FBtr0346172'] 2021-10-25 09:33:41.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267096 has a single transcript. 2021-10-25 09:33:41.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039436: ['FBtr0085057'] 2021-10-25 09:33:41.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039436 has a single transcript. 2021-10-25 09:33:41.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267097: ['FBtr0346173'] 2021-10-25 09:33:41.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267097 has a single transcript. 2021-10-25 09:33:41.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039437: ['FBtr0085055', 'FBtr0085056'] 2021-10-25 09:33:41.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032481: ['FBtr0080488'] 2021-10-25 09:33:41.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032481 has a single transcript. 2021-10-25 09:33:41.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267098: ['FBtr0346174'] 2021-10-25 09:33:41.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267098 has a single transcript. 2021-10-25 09:33:41.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267099: ['FBtr0346176'] 2021-10-25 09:33:41.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267099 has a single transcript. 2021-10-25 09:33:41.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032482: ['FBtr0080439', 'FBtr0080440', 'FBtr0080441', 'FBtr0334752'] 2021-10-25 09:33:42.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267100: ['FBtr0346180'] 2021-10-25 09:33:42.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267100 has a single transcript. 2021-10-25 09:33:42.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267101: ['FBtr0346177'] 2021-10-25 09:33:42.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267101 has a single transcript. 2021-10-25 09:33:42.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027500: ['FBtr0075363'] 2021-10-25 09:33:42.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027500 has a single transcript. 2021-10-25 09:33:42.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267102: ['FBtr0346179'] 2021-10-25 09:33:42.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267102 has a single transcript. 2021-10-25 09:33:42.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260942: ['FBtr0084261', 'FBtr0084262', 'FBtr0084263'] 2021-10-25 09:33:42.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26625523, 26625587)] 2021-10-25 09:33:42.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26624586, 26625652, 'FBtr0085055_exon_1') contains intron (26625523, 26625587) 2021-10-25 09:33:42.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085055_exon_1'] 2021-10-25 09:33:42.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027503: ['FBtr0081959', 'FBtr0346139'] 2021-10-25 09:33:42.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9763665, 9763985), (9763699, 9771654), (9764061, 9771796), (9764193, 9765608), (9764193, 9771654), (9765803, 9771654), (9770503, 9771654), (9771919, 9779550), (9771919, 9779445), (9774489, 9779445), (9779593, 9779651), (9779907, 9780122), (9780252, 9780535), (9780252, 9780406), (9780433, 9780535), (9780697, 9780765), (9781008, 9781077), (9781218, 9781702), (9781218, 9782608), (9781903, 9782608), (9782803, 9782873), (9784627, 9784696), (9784891, 9784951), (9785180, 9785241)] 2021-10-25 09:33:42.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267103: ['FBtr0346178'] 2021-10-25 09:33:42.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267103 has a single transcript. 2021-10-25 09:33:42.032 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9763543, 9764061, 'FBtr0076317_exon_1') contains intron (9763665, 9763985) 2021-10-25 09:33:42.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9763543, 9764193, 'FBtr0076318_exon_1') contains intron (9763665, 9763985) 2021-10-25 09:33:42.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9763543, 9764193, 'FBtr0076319_exon_1') contains intron (9763665, 9763985) 2021-10-25 09:33:42.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9763543, 9764193, 'FBtr0331848_exon_1') contains intron (9763665, 9763985) 2021-10-25 09:33:42.036 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076317_exon_1', 'FBtr0076318_exon_1', 'FBtr0076319_exon_1', 'FBtr0331848_exon_1'] 2021-10-25 09:33:42.036 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267104: ['FBtr0346197', 'FBtr0346198'] 2021-10-25 09:33:42.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053082: ['FBtr0070174', 'FBtr0346795'] 2021-10-25 09:33:42.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8986302, 8986490), (8988981, 8989054), (8989824, 8989888)] 2021-10-25 09:33:42.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039438: ['FBtr0085054'] 2021-10-25 09:33:42.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039438 has a single transcript. 2021-10-25 09:33:42.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22550878, 22554633), (22553895, 22554633), (22554757, 22554822), (22555013, 22555403)] 2021-10-25 09:33:42.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13204272, 13208109), (13208360, 13208420), (13208487, 13208664), (13208777, 13209471), (13208777, 13209435), (13208777, 13209492), (13208777, 13209501), (13209599, 13209659), (13209845, 13209910)] 2021-10-25 09:33:42.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29256937, 29257060), (29256937, 29257081)] 2021-10-25 09:33:42.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039439: ['FBtr0085053'] 2021-10-25 09:33:42.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039439 has a single transcript. 2021-10-25 09:33:42.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039440: ['FBtr0114538'] 2021-10-25 09:33:42.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039440 has a single transcript. 2021-10-25 09:33:42.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1031009, 1031068)] 2021-10-25 09:33:42.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039441: ['FBtr0085031'] 2021-10-25 09:33:42.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039441 has a single transcript. 2021-10-25 09:33:42.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039443: ['FBtr0085034'] 2021-10-25 09:33:42.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039443 has a single transcript. 2021-10-25 09:33:42.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039444: ['FBtr0085035'] 2021-10-25 09:33:42.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039444 has a single transcript. 2021-10-25 09:33:42.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027504: ['FBtr0088017', 'FBtr0088018', 'FBtr0333063'] 2021-10-25 09:33:42.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039448: ['FBtr0085049'] 2021-10-25 09:33:42.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039448 has a single transcript. 2021-10-25 09:33:42.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039449: ['FBtr0085047'] 2021-10-25 09:33:42.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039449 has a single transcript. 2021-10-25 09:33:42.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267105: ['FBtr0346199'] 2021-10-25 09:33:42.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267105 has a single transcript. 2021-10-25 09:33:42.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039450: ['FBtr0085037', 'FBtr0085038', 'FBtr0085039'] 2021-10-25 09:33:42.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267106: ['FBtr0346200'] 2021-10-25 09:33:42.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267106 has a single transcript. 2021-10-25 09:33:42.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053087: ['FBtr0344893', 'FBtr0344894'] 2021-10-25 09:33:42.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267107: ['FBtr0346201'] 2021-10-25 09:33:42.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267107 has a single transcript. 2021-10-25 09:33:42.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267108: ['FBtr0346202'] 2021-10-25 09:33:42.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267108 has a single transcript. 2021-10-25 09:33:42.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267109: ['FBtr0346204'] 2021-10-25 09:33:42.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267109 has a single transcript. 2021-10-25 09:33:42.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267110: ['FBtr0346203'] 2021-10-25 09:33:42.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267110 has a single transcript. 2021-10-25 09:33:42.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12147196, 12147334), (12149310, 12149372), (12149528, 12149589), (12150136, 12150910), (12150139, 12150529), (12150139, 12150910)] 2021-10-25 09:33:42.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267111: ['FBtr0346205'] 2021-10-25 09:33:42.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267111 has a single transcript. 2021-10-25 09:33:42.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260943: ['FBtr0310005', 'FBtr0310006', 'FBtr0075285', 'FBtr0113427', 'FBtr0113428', 'FBtr0290066', 'FBtr0333861'] 2021-10-25 09:33:42.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26717999, 26718327), (26718011, 26718327), (26718026, 26718327), (26718866, 26718921), (26719308, 26719366)] 2021-10-25 09:33:42.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267112: ['FBtr0346208', 'FBtr0346209'] 2021-10-25 09:33:42.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8174831, 8206626), (8174831, 8186904), (8186982, 8206626), (8206740, 8209505), (8209625, 8209713), (8209836, 8210084), (8210336, 8210400), (8210724, 8210974), (8211351, 8211526), (8212272, 8212330), (8213398, 8213465), (8215224, 8215284), (8215580, 8215645), (8216001, 8216059), (8216328, 8216383), (8218498, 8218777), (8219447, 8219518), (8221556, 8221645), (8222032, 8222093), (8222907, 8222978), (8223543, 8223610), (8224943, 8225000), (8225127, 8225250), (8225127, 8225262)] 2021-10-25 09:33:42.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032483: ['FBtr0080487'] 2021-10-25 09:33:42.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032483 has a single transcript. 2021-10-25 09:33:42.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032484: ['FBtr0080485', 'FBtr0334756', 'FBtr0334757'] 2021-10-25 09:33:42.250 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30528496, 30530131), (30530430, 30530566), (30530914, 30531851)] 2021-10-25 09:33:42.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.251 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001250: ['FBtr0074357', 'FBtr0301352', 'FBtr0301353', 'FBtr0301354'] 2021-10-25 09:33:42.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053092: ['FBtr0084140', 'FBtr0084141', 'FBtr0084142', 'FBtr0084143', 'FBtr0084144', 'FBtr0084146'] 2021-10-25 09:33:42.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027505: ['FBtr0080301', 'FBtr0080302'] 2021-10-25 09:33:42.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039451: ['FBtr0085046', 'FBtr0339242'] 2021-10-25 09:33:42.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267113: ['FBtr0346206', 'FBtr0346207'] 2021-10-25 09:33:42.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13212943, 13213008), (13214825, 13215300), (13214825, 13215081), (13214825, 13214946)] 2021-10-25 09:33:42.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12058763, 12058829), (12058766, 12058829), (12059027, 12059212), (12060338, 12060397), (12060525, 12060586), (12060803, 12060868), (12062662, 12062715), (12063025, 12063080)] 2021-10-25 09:33:42.334 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26720847, 26720918), (26722853, 26722925), (26723114, 26724166)] 2021-10-25 09:33:42.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30530476, 30530986), (30531559, 30531682)] 2021-10-25 09:33:42.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.353 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17065708, 17066624), (17065708, 17067136), (17066840, 17067136), (17067378, 17067992), (17068058, 17074192), (17068058, 17070290), (17072948, 17074192), (17073790, 17074192), (17074276, 17074352), (17074388, 17077621), (17077706, 17078115), (17078198, 17084107), (17084156, 17128878), (17128971, 17147106), (17128971, 17164912), (17164954, 17167014), (17167099, 17179293), (17179375, 17221801), (17221842, 17235351), (17236062, 17237831)] 2021-10-25 09:33:42.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16753554, 16753634), (16755464, 16755521), (16755765, 16755836), (16757115, 16758513), (16757115, 16760330), (16758588, 16760330), (16760379, 16760947), (16761009, 16764484), (16764611, 16769852), (16769950, 16771564), (16771695, 16779850), (16780196, 16783317), (16780196, 16780863), (16780196, 16782469)] 2021-10-25 09:33:42.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027506: ['FBtr0086958', 'FBtr0340213'] 2021-10-25 09:33:42.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21878071, 21878171), (21878308, 21878368), (21878380, 21878446), (21878577, 21878809), (21878577, 21878824), (21878577, 21878827), (21879390, 21879447)] 2021-10-25 09:33:42.401 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21877935, 21878577, 'FBtr0084140_exon_1') contains intron (21878071, 21878171) 2021-10-25 09:33:42.401 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21878368, 21878577, 'FBtr0084141_exon_3') contains intron (21878380, 21878446) 2021-10-25 09:33:42.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039452: ['FBtr0100553', 'FBtr0339240'] 2021-10-25 09:33:42.401 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21878171, 21878380, 'FBtr0084142_exon_2') contains intron (21878308, 21878368) 2021-10-25 09:33:42.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267114: ['FBtr0346210'] 2021-10-25 09:33:42.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267114 has a single transcript. 2021-10-25 09:33:42.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21878171, 21878380, 'FBtr0084143_exon_2') contains intron (21878308, 21878368) 2021-10-25 09:33:42.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21878171, 21878577, 'FBtr0084144_exon_2') contains intron (21878308, 21878368) 2021-10-25 09:33:42.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21878171, 21878577, 'FBtr0084146_exon_2') contains intron (21878308, 21878368) 2021-10-25 09:33:42.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084140_exon_1', 'FBtr0084141_exon_3', 'FBtr0084142_exon_2', 'FBtr0084143_exon_2', 'FBtr0084144_exon_2', 'FBtr0084146_exon_2'] 2021-10-25 09:33:42.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032485: ['FBtr0080484'] 2021-10-25 09:33:42.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032485 has a single transcript. 2021-10-25 09:33:42.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267115: ['FBtr0346211'] 2021-10-25 09:33:42.409 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267115 has a single transcript. 2021-10-25 09:33:42.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032486: ['FBtr0080444'] 2021-10-25 09:33:42.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032486 has a single transcript. 2021-10-25 09:33:42.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267116: ['FBtr0346212'] 2021-10-25 09:33:42.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267116 has a single transcript. 2021-10-25 09:33:42.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032487: ['FBtr0080483', 'FBtr0334755'] 2021-10-25 09:33:42.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267117: ['FBtr0346213'] 2021-10-25 09:33:42.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267117 has a single transcript. 2021-10-25 09:33:42.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267118: ['FBtr0346214'] 2021-10-25 09:33:42.442 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267118 has a single transcript. 2021-10-25 09:33:42.443 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17432708, 17432773), (17433130, 17433190), (17433334, 17433419), (17433355, 17433419), (17434058, 17434124), (17434975, 17444335)] 2021-10-25 09:33:42.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:42.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267119: ['FBtr0346215'] 2021-10-25 09:33:42.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267119 has a single transcript. 2021-10-25 09:33:42.449 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267120: ['FBtr0346216'] 2021-10-25 09:33:42.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267120 has a single transcript. 2021-10-25 09:33:42.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267121: ['FBtr0346217'] 2021-10-25 09:33:42.468 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267121 has a single transcript. 2021-10-25 09:33:42.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13222230, 13222360)] 2021-10-25 09:33:42.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267122: ['FBtr0346219'] 2021-10-25 09:33:42.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267122 has a single transcript. 2021-10-25 09:33:42.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267123: ['FBtr0346218'] 2021-10-25 09:33:42.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267123 has a single transcript. 2021-10-25 09:33:42.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267124: ['FBtr0346221'] 2021-10-25 09:33:42.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267124 has a single transcript. 2021-10-25 09:33:42.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267125: ['FBtr0346220'] 2021-10-25 09:33:42.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267125 has a single transcript. 2021-10-25 09:33:42.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039453: ['FBtr0085044', 'FBtr0339241'] 2021-10-25 09:33:42.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027507: ['FBtr0086034', 'FBtr0331967'] 2021-10-25 09:33:42.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267126: ['FBtr0346222'] 2021-10-25 09:33:42.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267126 has a single transcript. 2021-10-25 09:33:42.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267127: ['FBtr0346223'] 2021-10-25 09:33:42.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267127 has a single transcript. 2021-10-25 09:33:42.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001253: ['FBtr0076606', 'FBtr0076607', 'FBtr0333057'] 2021-10-25 09:33:42.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267128: ['FBtr0346224'] 2021-10-25 09:33:42.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267128 has a single transcript. 2021-10-25 09:33:42.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267129: ['FBtr0346225'] 2021-10-25 09:33:42.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032488: ['FBtr0080445'] 2021-10-25 09:33:42.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267129 has a single transcript. 2021-10-25 09:33:42.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032488 has a single transcript. 2021-10-25 09:33:42.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032489: ['FBtr0080482'] 2021-10-25 09:33:42.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032489 has a single transcript. 2021-10-25 09:33:42.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267130: ['FBtr0346226'] 2021-10-25 09:33:42.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267130 has a single transcript. 2021-10-25 09:33:42.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26736096, 26736238)] 2021-10-25 09:33:42.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5653916, 5653968)] 2021-10-25 09:33:42.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.551 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032490: ['FBtr0080446', 'FBtr0334753'] 2021-10-25 09:33:42.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267131: ['FBtr0346227', 'FBtr0346228'] 2021-10-25 09:33:42.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036044: ['FBtr0344234', 'FBtr0310626', 'FBtr0310627', 'FBtr0310629'] 2021-10-25 09:33:42.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8372583, 8374744), (8372583, 8374800), (8375071, 8379144), (8379316, 8379853), (8379985, 8385728), (8389558, 8389628), (8390178, 8390262)] 2021-10-25 09:33:42.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.592 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13227608, 13227699)] 2021-10-25 09:33:42.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039454: ['FBtr0085043'] 2021-10-25 09:33:42.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039454 has a single transcript. 2021-10-25 09:33:42.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:42.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027508: ['FBtr0084890', 'FBtr0330383'] 2021-10-25 09:33:42.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039459: ['FBtr0085061'] 2021-10-25 09:33:42.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039459 has a single transcript. 2021-10-25 09:33:42.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053093: ['FBtr0084287'] 2021-10-25 09:33:42.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053093 has a single transcript. 2021-10-25 09:33:42.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039461: ['FBtr0085064'] 2021-10-25 09:33:42.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039461 has a single transcript. 2021-10-25 09:33:42.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260944: ['FBtr0082275', 'FBtr0082277'] 2021-10-25 09:33:42.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053094: ['FBtr0083966', 'FBtr0334724', 'FBtr0334725'] 2021-10-25 09:33:42.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039462: ['FBtr0085067'] 2021-10-25 09:33:42.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039462 has a single transcript. 2021-10-25 09:33:42.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039463: ['FBtr0085068'] 2021-10-25 09:33:42.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039463 has a single transcript. 2021-10-25 09:33:42.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032491: ['FBtr0273448'] 2021-10-25 09:33:42.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032491 has a single transcript. 2021-10-25 09:33:42.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25654609, 25654669), (25654826, 25654894), (25655187, 25655251), (25655409, 25655469), (25657350, 25657414), (25658197, 25660591)] 2021-10-25 09:33:42.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.653 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039464: ['FBtr0085084', 'FBtr0085085'] 2021-10-25 09:33:42.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032492: ['FBtr0080448'] 2021-10-25 09:33:42.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032492 has a single transcript. 2021-10-25 09:33:42.663 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084890': ['FBtr0330383']} 2021-10-25 09:33:42.663 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330383']] 2021-10-25 09:33:42.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267132: ['FBtr0346229'] 2021-10-25 09:33:42.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267132 has a single transcript. 2021-10-25 09:33:42.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032493: ['FBtr0080481'] 2021-10-25 09:33:42.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032493 has a single transcript. 2021-10-25 09:33:42.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10784480, 10784556), (10784923, 10785402), (10784923, 10786157)] 2021-10-25 09:33:42.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027509: ['FBtr0077829'] 2021-10-25 09:33:42.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027509 has a single transcript. 2021-10-25 09:33:42.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267133: ['FBtr0346231'] 2021-10-25 09:33:42.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267133 has a single transcript. 2021-10-25 09:33:42.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9788744, 9788939), (9788744, 9790455), (9788972, 9789215), (9789271, 9791989), (9790673, 9791989), (9790993, 9791989), (9792216, 9792333), (9792934, 9793164), (9793399, 9793526), (9793414, 9793526), (9794003, 9794610), (9794762, 9797427)] 2021-10-25 09:33:42.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032494: ['FBtr0080450', 'FBtr0334754'] 2021-10-25 09:33:42.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267134: ['FBtr0346260'] 2021-10-25 09:33:42.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027512: ['FBtr0084476', 'FBtr0084477', 'FBtr0334770'] 2021-10-25 09:33:42.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267134 has a single transcript. 2021-10-25 09:33:42.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267135: ['FBtr0346259'] 2021-10-25 09:33:42.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267135 has a single transcript. 2021-10-25 09:33:42.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20832873, 20835224), (20834465, 20835224), (20835331, 20835874), (20835984, 20837584), (20837922, 20838034), (20838261, 20838324), (20838445, 20838512), (20838623, 20838675), (20838623, 20838678), (20838887, 20839057), (20839215, 20839290)] 2021-10-25 09:33:42.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26950568, 26950637), (26951009, 26951071), (26951419, 26951774), (26951898, 26953003), (26951898, 26956519), (26956589, 26958207)] 2021-10-25 09:33:42.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001254: ['FBtr0073141'] 2021-10-25 09:33:42.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267136: ['FBtr0346258'] 2021-10-25 09:33:42.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001254 has a single transcript. 2021-10-25 09:33:42.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267136 has a single transcript. 2021-10-25 09:33:42.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267137: ['FBtr0346257'] 2021-10-25 09:33:42.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267137 has a single transcript. 2021-10-25 09:33:42.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001255: ['FBtr0310412'] 2021-10-25 09:33:42.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001255 has a single transcript. 2021-10-25 09:33:42.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267138: ['FBtr0346256'] 2021-10-25 09:33:42.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267138 has a single transcript. 2021-10-25 09:33:42.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13240275, 13240335), (13240710, 13240762), (13240909, 13241503)] 2021-10-25 09:33:42.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001256: ['FBtr0075842', 'FBtr0075843', 'FBtr0301405'] 2021-10-25 09:33:42.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267139: ['FBtr0346255'] 2021-10-25 09:33:42.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267139 has a single transcript. 2021-10-25 09:33:42.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260945: ['FBtr0075945', 'FBtr0300561'] 2021-10-25 09:33:42.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267140: ['FBtr0346254'] 2021-10-25 09:33:42.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267140 has a single transcript. 2021-10-25 09:33:42.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267141: ['FBtr0346253'] 2021-10-25 09:33:42.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267141 has a single transcript. 2021-10-25 09:33:42.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267142: ['FBtr0346252'] 2021-10-25 09:33:42.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267142 has a single transcript. 2021-10-25 09:33:42.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23689737, 23689791), (23690010, 23690075), (23691045, 23691108), (23692012, 23692070), (23692360, 23692417), (23692812, 23692888), (23693147, 23693334), (23693539, 23693598), (23693861, 23694022), (23694525, 23694952)] 2021-10-25 09:33:42.753 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23692070, 23692812, 'FBtr0084476_exon_6') contains intron (23692360, 23692417) 2021-10-25 09:33:42.753 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23692070, 23692812, 'FBtr0084477_exon_5') contains intron (23692360, 23692417) 2021-10-25 09:33:42.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084476_exon_6', 'FBtr0084477_exon_5'] 2021-10-25 09:33:42.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267143: ['FBtr0346251'] 2021-10-25 09:33:42.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267143 has a single transcript. 2021-10-25 09:33:42.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039465: ['FBtr0085082', 'FBtr0273310', 'FBtr0344664', 'FBtr0344665', 'FBtr0336726'] 2021-10-25 09:33:42.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12785413, 12785470), (12785606, 12785671), (12785808, 12785870), (12787028, 12787386), (12787536, 12787596), (12787733, 12787792), (12787953, 12788015), (12788089, 12788248), (12788374, 12788540), (12788628, 12797682), (12797856, 12804354)] 2021-10-25 09:33:42.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267144: ['FBtr0346250'] 2021-10-25 09:33:42.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12787386, 12787733, 'FBtr0300561_exon_7') contains intron (12787536, 12787596) 2021-10-25 09:33:42.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267144 has a single transcript. 2021-10-25 09:33:42.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300561_exon_7'] 2021-10-25 09:33:42.765 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267145: ['FBtr0346249'] 2021-10-25 09:33:42.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267145 has a single transcript. 2021-10-25 09:33:42.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13382835, 13382910), (13382835, 13382913)] 2021-10-25 09:33:42.777 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13382769, 13383999, 'FBtr0075843_exon_1') contains intron (13382835, 13382910) 2021-10-25 09:33:42.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075843_exon_1'] 2021-10-25 09:33:42.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267146: ['FBtr0346248'] 2021-10-25 09:33:42.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267146 has a single transcript. 2021-10-25 09:33:42.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032495: ['FBtr0080452'] 2021-10-25 09:33:42.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032495 has a single transcript. 2021-10-25 09:33:42.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267147: ['FBtr0346247'] 2021-10-25 09:33:42.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267147 has a single transcript. 2021-10-25 09:33:42.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032499: ['FBtr0080460', 'FBtr0334865'] 2021-10-25 09:33:42.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267148: ['FBtr0346246'] 2021-10-25 09:33:42.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267148 has a single transcript. 2021-10-25 09:33:42.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053095: ['FBtr0084774', 'FBtr0100204'] 2021-10-25 09:33:42.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267149: ['FBtr0346245'] 2021-10-25 09:33:42.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267149 has a single transcript. 2021-10-25 09:33:42.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267150: ['FBtr0346244'] 2021-10-25 09:33:42.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267150 has a single transcript. 2021-10-25 09:33:42.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260953: ['FBtr0301738'] 2021-10-25 09:33:42.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260953 has a single transcript. 2021-10-25 09:33:42.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267151: ['FBtr0346243'] 2021-10-25 09:33:42.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267151 has a single transcript. 2021-10-25 09:33:42.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036046: ['FBtr0076329'] 2021-10-25 09:33:42.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036046 has a single transcript. 2021-10-25 09:33:42.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260954: ['FBtr0301740', 'FBtr0301741'] 2021-10-25 09:33:42.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267152: ['FBtr0346241'] 2021-10-25 09:33:42.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267152 has a single transcript. 2021-10-25 09:33:42.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036052: ['FBtr0076366', 'FBtr0300688'] 2021-10-25 09:33:42.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13286818, 13286870), (13287313, 13287373), (13287313, 13287376), (13288241, 13288304), (13288627, 13288679), (13289090, 13289175)] 2021-10-25 09:33:42.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13286776, 13287313, 'FBtr0080460_exon_1') contains intron (13286818, 13286870) 2021-10-25 09:33:42.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080460_exon_1'] 2021-10-25 09:33:42.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267153: ['FBtr0346239', 'FBtr0346240'] 2021-10-25 09:33:42.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25097718, 25097834), (25098469, 25098533), (25098713, 25098774), (25098907, 25099195), (25099460, 25099941)] 2021-10-25 09:33:42.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25097671, 25098469, 'FBtr0100204_exon_1') contains intron (25097718, 25097834) 2021-10-25 09:33:42.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100204_exon_1'] 2021-10-25 09:33:42.846 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027513: ['FBtr0088685', 'FBtr0339310'] 2021-10-25 09:33:42.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9858063, 9858337), (9859716, 9859778)] 2021-10-25 09:33:42.873 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9858337, 9859889, 'FBtr0300688_exon_1') contains intron (9859716, 9859778) 2021-10-25 09:33:42.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300688_exon_1'] 2021-10-25 09:33:42.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6761879, 6763179)] 2021-10-25 09:33:42.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26962451, 26963157), (26962451, 26962539), (26963080, 26963157), (26963520, 26964117), (26964285, 26964642)] 2021-10-25 09:33:42.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001257: ['FBtr0073248', 'FBtr0073249', 'FBtr0073250', 'FBtr0333569'] 2021-10-25 09:33:42.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14741722, 14741789)] 2021-10-25 09:33:42.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032503: ['FBtr0080463', 'FBtr0329824'] 2021-10-25 09:33:42.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8899312, 8899366), (8899315, 8899366)] 2021-10-25 09:33:42.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053096: ['FBtr0114464', 'FBtr0301975', 'FBtr0301976', 'FBtr0344621', 'FBtr0344622'] 2021-10-25 09:33:42.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267154: ['FBtr0346238'] 2021-10-25 09:33:42.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267154 has a single transcript. 2021-10-25 09:33:42.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036053: ['FBtr0076363', 'FBtr0076364', 'FBtr0076365', 'FBtr0076362'] 2021-10-25 09:33:42.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260955: ['FBtr0301742'] 2021-10-25 09:33:42.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260955 has a single transcript. 2021-10-25 09:33:42.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267155: ['FBtr0346237'] 2021-10-25 09:33:42.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267155 has a single transcript. 2021-10-25 09:33:42.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:42.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267156: ['FBtr0346236'] 2021-10-25 09:33:42.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267156 has a single transcript. 2021-10-25 09:33:42.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260959: ['FBtr0301428', 'FBtr0301429', 'FBtr0301430', 'FBtr0301431'] 2021-10-25 09:33:42.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267157: ['FBtr0346235'] 2021-10-25 09:33:42.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267157 has a single transcript. 2021-10-25 09:33:42.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4224851, 4224926), (4225706, 4225883), (4225706, 4235902), (4225706, 4226573)] 2021-10-25 09:33:42.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:42.962 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:42.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027514: ['FBtr0332175', 'FBtr0332176', 'FBtr0290212'] 2021-10-25 09:33:42.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267158: ['FBtr0346234'] 2021-10-25 09:33:42.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267158 has a single transcript. 2021-10-25 09:33:42.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267159: ['FBtr0346233'] 2021-10-25 09:33:42.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267159 has a single transcript. 2021-10-25 09:33:42.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267160: ['FBtr0346232'] 2021-10-25 09:33:42.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267160 has a single transcript. 2021-10-25 09:33:42.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267161: ['FBtr0346262'] 2021-10-25 09:33:42.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267161 has a single transcript. 2021-10-25 09:33:42.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267162: ['FBtr0346266'] 2021-10-25 09:33:42.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267162 has a single transcript. 2021-10-25 09:33:43.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032505: ['FBtr0080464', 'FBtr0345611'] 2021-10-25 09:33:43.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267163: ['FBtr0346284'] 2021-10-25 09:33:43.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267163 has a single transcript. 2021-10-25 09:33:43.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9860937, 9860999), (9861335, 9861394), (9862035, 9862090), (9862908, 9862962), (9863262, 9863320), (9863616, 9863776), (9863616, 9864192), (9863914, 9864192), (9864099, 9864192)] 2021-10-25 09:33:43.007 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9863776, 9864349, 'FBtr0076364_exon_1') contains intron (9863914, 9864192) 2021-10-25 09:33:43.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076364_exon_1'] 2021-10-25 09:33:43.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267164: ['FBtr0346283'] 2021-10-25 09:33:43.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267164 has a single transcript. 2021-10-25 09:33:43.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267165: ['FBtr0346286', 'FBtr0346287'] 2021-10-25 09:33:43.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6378179, 6378405), (6378179, 6378469), (6379954, 6380017)] 2021-10-25 09:33:43.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.037 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25097718, 25097834), (25097718, 25097864), (25098469, 25098533), (25098713, 25098774), (25098907, 25099195), (25099460, 25099941)] 2021-10-25 09:33:43.039 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25097671, 25098469, 'FBtr0301976_exon_1') contains intron (25097718, 25097834) 2021-10-25 09:33:43.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25097671, 25098469, 'FBtr0344622_exon_1') contains intron (25097718, 25097834) 2021-10-25 09:33:43.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301976_exon_1', 'FBtr0344622_exon_1'] 2021-10-25 09:33:43.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11896532, 11896595), (11896814, 11897108), (11898477, 11898546), (11898638, 11898918), (11899062, 11902357), (11902550, 11902618), (11902840, 11903164), (11903411, 11903580)] 2021-10-25 09:33:43.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:43.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039466: ['FBtr0085069', 'FBtr0301134'] 2021-10-25 09:33:43.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:43.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032506: ['FBtr0302043', 'FBtr0342641'] 2021-10-25 09:33:43.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001258: ['FBtr0077008', 'FBtr0332065', 'FBtr0332066', 'FBtr0332067'] 2021-10-25 09:33:43.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26967549, 26969684), (26969795, 26970326), (26969795, 26970651), (26970344, 26970651), (26970823, 26970882), (26971849, 26971909), (26975976, 26976032), (26976229, 26976288)] 2021-10-25 09:33:43.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267166: ['FBtr0346285'] 2021-10-25 09:33:43.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267166 has a single transcript. 2021-10-25 09:33:43.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027515: ['FBtr0079523', 'FBtr0079524', 'FBtr0331234', 'FBtr0331235', 'FBtr0331236'] 2021-10-25 09:33:43.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267167: ['FBtr0346288'] 2021-10-25 09:33:43.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267167 has a single transcript. 2021-10-25 09:33:43.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13351394, 13351457), (13351611, 13351668), (13351839, 13351929), (13352633, 13352800), (13353210, 13353311), (13353399, 13353714), (13353834, 13354101), (13354648, 13354941)] 2021-10-25 09:33:43.161 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13354101, 13355073, 'FBtr0302043_exon_1') contains intron (13354648, 13354941) 2021-10-25 09:33:43.161 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302043_exon_1'] 2021-10-25 09:33:43.161 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267168: ['FBtr0346290'] 2021-10-25 09:33:43.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267168 has a single transcript. 2021-10-25 09:33:43.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036056: ['FBtr0076360', 'FBtr0113156'] 2021-10-25 09:33:43.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267169: ['FBtr0346289'] 2021-10-25 09:33:43.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267169 has a single transcript. 2021-10-25 09:33:43.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039467: ['FBtr0085071', 'FBtr0085072', 'FBtr0085073', 'FBtr0085074', 'FBtr0085070', 'FBtr0331701'] 2021-10-25 09:33:43.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267170: ['FBtr0346291'] 2021-10-25 09:33:43.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267170 has a single transcript. 2021-10-25 09:33:43.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260960: ['FBtr0075355', 'FBtr0075356'] 2021-10-25 09:33:43.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6259910, 6259980), (6260436, 6260504), (6260884, 6262558), (6260884, 6261065), (6260884, 6260971)] 2021-10-25 09:33:43.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267171: ['FBtr0346292'] 2021-10-25 09:33:43.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267171 has a single transcript. 2021-10-25 09:33:43.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9893464, 9893517), (9893654, 9893708), (9894282, 9894343), (9894532, 9894589)] 2021-10-25 09:33:43.219 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032507: ['FBtr0080474'] 2021-10-25 09:33:43.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032507 has a single transcript. 2021-10-25 09:33:43.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267172: ['FBtr0346293'] 2021-10-25 09:33:43.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267172 has a single transcript. 2021-10-25 09:33:43.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032509: ['FBtr0080465'] 2021-10-25 09:33:43.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032509 has a single transcript. 2021-10-25 09:33:43.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267173: ['FBtr0346295'] 2021-10-25 09:33:43.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267173 has a single transcript. 2021-10-25 09:33:43.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16650582, 16651132), (16651255, 16651397), (16651535, 16659229), (16659466, 16661410), (16659466, 16661470)] 2021-10-25 09:33:43.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032511: ['FBtr0080472', 'FBtr0342640'] 2021-10-25 09:33:43.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7821308, 7822922), (7821308, 7822928), (7821648, 7822641), (7822056, 7822675), (7822056, 7822641), (7823100, 7823451), (7824028, 7824087), (7824351, 7824427), (7824480, 7824579)] 2021-10-25 09:33:43.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267174: ['FBtr0346296'] 2021-10-25 09:33:43.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267174 has a single transcript. 2021-10-25 09:33:43.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053098: ['FBtr0082578', 'FBtr0082579', 'FBtr0082580', 'FBtr0332161', 'FBtr0332162'] 2021-10-25 09:33:43.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267175: ['FBtr0346300', 'FBtr0346301'] 2021-10-25 09:33:43.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036057: ['FBtr0076359', 'FBtr0113157'] 2021-10-25 09:33:43.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13370564, 13370623), (13370763, 13370841)] 2021-10-25 09:33:43.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260962: ['FBtr0082709'] 2021-10-25 09:33:43.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260962 has a single transcript. 2021-10-25 09:33:43.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:43.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260964: ['FBtr0310062', 'FBtr0091491', 'FBtr0091492', 'FBtr0091493'] 2021-10-25 09:33:43.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9893464, 9893517), (9893654, 9893708), (9894282, 9894343), (9894532, 9894589)] 2021-10-25 09:33:43.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26978868, 26983962), (26980702, 26981513), (26980876, 26981532), (26980876, 26980951), (26980888, 26981513), (26981101, 26981532), (26981751, 26983962), (26984217, 26984275), (26984434, 26984494), (26984636, 26984704)] 2021-10-25 09:33:43.338 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26980517, 26981101, 'FBtr0085073_exon_1') contains intron (26980876, 26980951) 2021-10-25 09:33:43.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085073_exon_1'] 2021-10-25 09:33:43.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001259: ['FBtr0078183'] 2021-10-25 09:33:43.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001259 has a single transcript. 2021-10-25 09:33:43.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032512: ['FBtr0080471', 'FBtr0342639'] 2021-10-25 09:33:43.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001263: ['FBtr0071909', 'FBtr0305132'] 2021-10-25 09:33:43.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12387286, 12387530), (12387286, 12387543), (12387637, 12387704), (12387926, 12387978), (12388235, 12388297)] 2021-10-25 09:33:43.374 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12387978, 12388585, 'FBtr0082580_exon_3') contains intron (12388235, 12388297) 2021-10-25 09:33:43.374 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082580_exon_3'] 2021-10-25 09:33:43.374 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267176: ['FBtr0346302'] 2021-10-25 09:33:43.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267176 has a single transcript. 2021-10-25 09:33:43.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13372238, 13372307), (13372253, 13372307), (13372636, 13372694)] 2021-10-25 09:33:43.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036058: ['FBtr0076356', 'FBtr0076357', 'FBtr0076358'] 2021-10-25 09:33:43.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267177: ['FBtr0346303'] 2021-10-25 09:33:43.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267177 has a single transcript. 2021-10-25 09:33:43.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267178: ['FBtr0346305'] 2021-10-25 09:33:43.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267178 has a single transcript. 2021-10-25 09:33:43.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13518139, 13518537), (13518855, 13518976), (13519572, 13519631), (13519690, 13519824), (13519963, 13520027), (13520198, 13527887), (13528386, 13531413), (13528386, 13529510), (13531619, 13532660), (13531619, 13534106)] 2021-10-25 09:33:43.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22855953, 22856023), (22856320, 22856380), (22856520, 22856577), (22856689, 22856748), (22856973, 22857037), (22857393, 22857455), (22857546, 22857600), (22858175, 22858561), (22858211, 22858561)] 2021-10-25 09:33:43.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267179: ['FBtr0346306'] 2021-10-25 09:33:43.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267179 has a single transcript. 2021-10-25 09:33:43.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267180: ['FBtr0346307'] 2021-10-25 09:33:43.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267180 has a single transcript. 2021-10-25 09:33:43.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267181: ['FBtr0346309', 'FBtr0346310', 'FBtr0346311'] 2021-10-25 09:33:43.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027518: ['FBtr0085543', 'FBtr0330297'] 2021-10-25 09:33:43.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032513: ['FBtr0080468', 'FBtr0342631', 'FBtr0346420'] 2021-10-25 09:33:43.473 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9895876, 9895957), (9896122, 9896178), (9896388, 9896453), (9896635, 9896707), (9896635, 9897928), (9898202, 9898522)] 2021-10-25 09:33:43.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001269: ['FBtr0088068', 'FBtr0088069', 'FBtr0345673'] 2021-10-25 09:33:43.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29742603, 29742666), (29742852, 29742918), (29743377, 29743434), (29743590, 29743650), (29743732, 29743788), (29743735, 29743788), (29744121, 29744183), (29744823, 29744881)] 2021-10-25 09:33:43.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12613796, 12615629), (12614797, 12615629)] 2021-10-25 09:33:43.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13375151, 13375210)] 2021-10-25 09:33:43.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053099: ['FBtr0084288'] 2021-10-25 09:33:43.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053099 has a single transcript. 2021-10-25 09:33:43.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11474709, 11474809), (11477269, 11504928), (11504934, 11506068), (11506229, 11506648)] 2021-10-25 09:33:43.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027521: ['FBtr0074222', 'FBtr0336977'] 2021-10-25 09:33:43.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053100: ['FBtr0084587', 'FBtr0300475', 'FBtr0303159', 'FBtr0303160'] 2021-10-25 09:33:43.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039469: ['FBtr0085075'] 2021-10-25 09:33:43.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039469 has a single transcript. 2021-10-25 09:33:43.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260965: ['FBtr0301717', 'FBtr0304053'] 2021-10-25 09:33:43.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039470: ['FBtr0085078'] 2021-10-25 09:33:43.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039470 has a single transcript. 2021-10-25 09:33:43.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036059: ['FBtr0076344', 'FBtr0114600', 'FBtr0113158', 'FBtr0113159', 'FBtr0345694', 'FBtr0345695'] 2021-10-25 09:33:43.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039471: ['FBtr0085077'] 2021-10-25 09:33:43.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039471 has a single transcript. 2021-10-25 09:33:43.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16304142, 16304252), (16304975, 16305158)] 2021-10-25 09:33:43.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039472: ['FBtr0085153'] 2021-10-25 09:33:43.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039472 has a single transcript. 2021-10-25 09:33:43.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267182: ['FBtr0346312'] 2021-10-25 09:33:43.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267182 has a single transcript. 2021-10-25 09:33:43.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039473: ['FBtr0085152'] 2021-10-25 09:33:43.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039473 has a single transcript. 2021-10-25 09:33:43.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267183: ['FBtr0346313'] 2021-10-25 09:33:43.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267183 has a single transcript. 2021-10-25 09:33:43.625 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12814880, 12816198), (12818525, 12818600), (12821807, 12821864), (12822187, 12822244), (12822555, 12822612), (12822667, 12822725), (12822916, 12822978), (12823469, 12823527), (12823684, 12823753), (12823945, 12824003)] 2021-10-25 09:33:43.626 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12816198, 12821807, 'FBtr0301717_exon_2') contains intron (12818525, 12818600) 2021-10-25 09:33:43.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301717_exon_2'] 2021-10-25 09:33:43.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039474: ['FBtr0085151'] 2021-10-25 09:33:43.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039474 has a single transcript. 2021-10-25 09:33:43.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267184: ['FBtr0346314'] 2021-10-25 09:33:43.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267184 has a single transcript. 2021-10-25 09:33:43.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032514: ['FBtr0080470'] 2021-10-25 09:33:43.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032514 has a single transcript. 2021-10-25 09:33:43.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039475: ['FBtr0085150'] 2021-10-25 09:33:43.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039475 has a single transcript. 2021-10-25 09:33:43.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267185: ['FBtr0346317'] 2021-10-25 09:33:43.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267185 has a single transcript. 2021-10-25 09:33:43.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039476: ['FBtr0085149'] 2021-10-25 09:33:43.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039476 has a single transcript. 2021-10-25 09:33:43.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032515: ['FBtr0080498', 'FBtr0080497', 'FBtr0100220', 'FBtr0342632', 'FBtr0342633', 'FBtr0303269'] 2021-10-25 09:33:43.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267186: ['FBtr0346318'] 2021-10-25 09:33:43.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267186 has a single transcript. 2021-10-25 09:33:43.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267187: ['FBtr0346319'] 2021-10-25 09:33:43.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267187 has a single transcript. 2021-10-25 09:33:43.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039478: ['FBtr0113296', 'FBtr0331704', 'FBtr0331705', 'FBtr0346156'] 2021-10-25 09:33:43.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267188: ['FBtr0346320'] 2021-10-25 09:33:43.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267188 has a single transcript. 2021-10-25 09:33:43.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027524: ['FBtr0082172'] 2021-10-25 09:33:43.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027524 has a single transcript. 2021-10-25 09:33:43.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24063831, 24064181), (24064060, 24064181), (24064330, 24106824), (24068064, 24106824), (24068064, 24101295), (24102046, 24106824), (24107284, 24108469)] 2021-10-25 09:33:43.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001276: ['FBtr0088154'] 2021-10-25 09:33:43.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001276 has a single transcript. 2021-10-25 09:33:43.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027525: ['FBtr0088245', 'FBtr0339475'] 2021-10-25 09:33:43.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267189: ['FBtr0346332', 'FBtr0346333', 'FBtr0346334'] 2021-10-25 09:33:43.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001280: ['FBtr0085595', 'FBtr0085596', 'FBtr0085597'] 2021-10-25 09:33:43.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260967: ['FBtr0301744'] 2021-10-25 09:33:43.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260967 has a single transcript. 2021-10-25 09:33:43.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260968: ['FBtr0301743'] 2021-10-25 09:33:43.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260968 has a single transcript. 2021-10-25 09:33:43.712 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10838587, 10838646)] 2021-10-25 09:33:43.712 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260969: ['FBtr0301747'] 2021-10-25 09:33:43.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260969 has a single transcript. 2021-10-25 09:33:43.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260970: ['FBtr0301748', 'FBtr0331298', 'FBtr0331299'] 2021-10-25 09:33:43.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9899355, 9899725), (9900084, 9900152), (9900306, 9900422), (9900696, 9900760), (9901018, 9902150), (9901018, 9901342), (9901434, 9901560), (9901434, 9902150)] 2021-10-25 09:33:43.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27058582, 27058712), (27058911, 27059070), (27059015, 27059070), (27059119, 27059364), (27060196, 27060257), (27060540, 27060602), (27061176, 27061240), (27061335, 27061398), (27061558, 27063279)] 2021-10-25 09:33:43.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30038955, 30039061), (30039186, 30039244), (30039406, 30039472), (30039406, 30039476)] 2021-10-25 09:33:43.748 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27058712, 27059119, 'FBtr0113296_exon_7') contains intron (27058911, 27059070) 2021-10-25 09:33:43.748 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27058712, 27059119, 'FBtr0346156_exon_7') contains intron (27058911, 27059070) 2021-10-25 09:33:43.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113296_exon_7', 'FBtr0346156_exon_7'] 2021-10-25 09:33:43.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10217763, 10218123), (10218379, 10218736)] 2021-10-25 09:33:43.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027526: ['FBtr0084347'] 2021-10-25 09:33:43.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027526 has a single transcript. 2021-10-25 09:33:43.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027527: ['FBtr0078596', 'FBtr0346344'] 2021-10-25 09:33:43.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13382787, 13382895), (13383664, 13383736), (13384022, 13384656), (13384022, 13384983), (13384022, 13384986), (13384022, 13384526), (13384794, 13384983), (13384794, 13384986)] 2021-10-25 09:33:43.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7936719, 7936779), (7937611, 7939687), (7940424, 7940494), (7940723, 7940782), (7941195, 7941255), (7941414, 7947414), (7950297, 7950360), (7950297, 7950363), (7950784, 7950862), (7951644, 7951717), (7951849, 7951923), (7952063, 7952127)] 2021-10-25 09:33:43.800 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7935895, 7937611, 'FBtr0301748_exon_1') contains intron (7936719, 7936779) 2021-10-25 09:33:43.801 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7935895, 7937611, 'FBtr0331298_exon_1') contains intron (7936719, 7936779) 2021-10-25 09:33:43.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301748_exon_1', 'FBtr0331298_exon_1'] 2021-10-25 09:33:43.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.814 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0301748': ['FBtr0331298']} 2021-10-25 09:33:43.814 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331298']] 2021-10-25 09:33:43.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053105: ['FBtr0082093', 'FBtr0303038'] 2021-10-25 09:33:43.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6234954, 6235582)] 2021-10-25 09:33:43.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001281: ['FBtr0085598'] 2021-10-25 09:33:43.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001281 has a single transcript. 2021-10-25 09:33:43.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267190: ['FBtr0346324'] 2021-10-25 09:33:43.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267190 has a single transcript. 2021-10-25 09:33:43.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9687637, 9687700), (9687767, 9688535), (9688621, 9688713), (9688853, 9689079), (9689253, 9689321), (9689875, 9690021), (9690078, 9690431), (9691103, 9691164), (9692504, 9692566)] 2021-10-25 09:33:43.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001285: ['FBtr0088704', 'FBtr0345661'] 2021-10-25 09:33:43.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267191: ['FBtr0346325'] 2021-10-25 09:33:43.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267191 has a single transcript. 2021-10-25 09:33:43.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260971: ['FBtr0301749', 'FBtr0345703', 'FBtr0345704'] 2021-10-25 09:33:43.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267192: ['FBtr0346326'] 2021-10-25 09:33:43.872 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267192 has a single transcript. 2021-10-25 09:33:43.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267193: ['FBtr0346327'] 2021-10-25 09:33:43.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267193 has a single transcript. 2021-10-25 09:33:43.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027528: ['FBtr0074359', 'FBtr0343363', 'FBtr0343364'] 2021-10-25 09:33:43.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039479: ['FBtr0331702', 'FBtr0299564'] 2021-10-25 09:33:43.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267194: ['FBtr0346328'] 2021-10-25 09:33:43.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267194 has a single transcript. 2021-10-25 09:33:43.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267195: ['FBtr0346329'] 2021-10-25 09:33:43.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267195 has a single transcript. 2021-10-25 09:33:43.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:43.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053107: ['FBtr0084279'] 2021-10-25 09:33:43.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053107 has a single transcript. 2021-10-25 09:33:43.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267196: ['FBtr0346330'] 2021-10-25 09:33:43.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267196 has a single transcript. 2021-10-25 09:33:43.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053108: ['FBtr0084504', 'FBtr0300647'] 2021-10-25 09:33:43.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267197: ['FBtr0346351'] 2021-10-25 09:33:43.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267197 has a single transcript. 2021-10-25 09:33:43.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27076258, 27078661), (27078952, 27079043), (27079401, 27079878), (27080082, 27081432), (27080082, 27082563)] 2021-10-25 09:33:43.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4841440, 4869495), (4869554, 4894617), (4895060, 4895183), (4895838, 4898407), (4898897, 4899120), (4899452, 4903945), (4904875, 4904965)] 2021-10-25 09:33:43.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267198: ['FBtr0346356'] 2021-10-25 09:33:43.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267198 has a single transcript. 2021-10-25 09:33:43.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267199: ['FBtr0346357'] 2021-10-25 09:33:43.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267199 has a single transcript. 2021-10-25 09:33:43.947 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0301749': ['FBtr0345703']} 2021-10-25 09:33:43.948 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0345703']] 2021-10-25 09:33:43.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16727889, 16727949), (16728453, 16728537), (16728660, 16728773), (16729325, 16729387), (16729515, 16729571), (16729723, 16729782), (16730046, 16744613), (16744772, 16744844), (16745180, 16745514), (16745195, 16745514), (16745953, 16746059), (16745953, 16751507)] 2021-10-25 09:33:43.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267200: ['FBtr0346352'] 2021-10-25 09:33:43.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267200 has a single transcript. 2021-10-25 09:33:43.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23995966, 23996031), (23996279, 23997111), (23997208, 23997266)] 2021-10-25 09:33:43.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:43.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:43.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267201: ['FBtr0346353', 'FBtr0346354'] 2021-10-25 09:33:43.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001291: ['FBtr0088410', 'FBtr0088411', 'FBtr0330606'] 2021-10-25 09:33:43.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036062: ['FBtr0076355', 'FBtr0331581'] 2021-10-25 09:33:43.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039480: ['FBtr0085136', 'FBtr0331703'] 2021-10-25 09:33:44.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260972: ['FBtr0088624', 'FBtr0088625'] 2021-10-25 09:33:44.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:44.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032516: ['FBtr0080525', 'FBtr0080526'] 2021-10-25 09:33:44.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053109: ['FBtr0082900'] 2021-10-25 09:33:44.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053109 has a single transcript. 2021-10-25 09:33:44.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053110: ['FBtr0084264'] 2021-10-25 09:33:44.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053110 has a single transcript. 2021-10-25 09:33:44.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9967621, 9967686), (9967780, 9967833), (9968041, 9968104)] 2021-10-25 09:33:44.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27083902, 27083965), (27084242, 27084298), (27084483, 27086340), (27084483, 27087511)] 2021-10-25 09:33:44.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10096596, 10097004), (10097138, 10097242)] 2021-10-25 09:33:44.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053111: ['FBtr0100312', 'FBtr0084530', 'FBtr0084529', 'FBtr0334892', 'FBtr0334893'] 2021-10-25 09:33:44.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9135705, 9135764), (9135995, 9136951)] 2021-10-25 09:33:44.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.051 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088411': ['FBtr0330606']} 2021-10-25 09:33:44.051 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330606']] 2021-10-25 09:33:44.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13386036, 13386098), (13386257, 13386529), (13386257, 13386487), (13386690, 13386756), (13387113, 13387176)] 2021-10-25 09:33:44.060 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.060 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267202: ['FBtr0346355'] 2021-10-25 09:33:44.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267202 has a single transcript. 2021-10-25 09:33:44.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027529: ['FBtr0086280', 'FBtr0086281', 'FBtr0309253', 'FBtr0301207'] 2021-10-25 09:33:44.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267203: ['FBtr0346358', 'FBtr0346359'] 2021-10-25 09:33:44.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039481: ['FBtr0085135'] 2021-10-25 09:33:44.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039481 has a single transcript. 2021-10-25 09:33:44.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036063: ['FBtr0076354', 'FBtr0331580'] 2021-10-25 09:33:44.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039482: ['FBtr0085103'] 2021-10-25 09:33:44.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039482 has a single transcript. 2021-10-25 09:33:44.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039483: ['FBtr0085104'] 2021-10-25 09:33:44.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039483 has a single transcript. 2021-10-25 09:33:44.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001296: ['FBtr0082666', 'FBtr0302563'] 2021-10-25 09:33:44.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260985: ['FBtr0073264'] 2021-10-25 09:33:44.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260985 has a single transcript. 2021-10-25 09:33:44.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039485: ['FBtr0085105'] 2021-10-25 09:33:44.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039485 has a single transcript. 2021-10-25 09:33:44.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032517: ['FBtr0080499'] 2021-10-25 09:33:44.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032517 has a single transcript. 2021-10-25 09:33:44.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039486: ['FBtr0085133'] 2021-10-25 09:33:44.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039486 has a single transcript. 2021-10-25 09:33:44.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260986: ['FBtr0339588', 'FBtr0070258', 'FBtr0452078'] 2021-10-25 09:33:44.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032518: ['FBtr0080524', 'FBtr0342637', 'FBtr0345449'] 2021-10-25 09:33:44.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:44.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.133 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9971545, 9971663), (9971602, 9971663)] 2021-10-25 09:33:44.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039487: ['FBtr0085132', 'FBtr0347412', 'FBtr0345216'] 2021-10-25 09:33:44.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23802241, 23806625), (23802241, 23806310), (23802241, 23805759), (23806120, 23806625), (23806537, 23806625), (23806821, 23806882), (23806995, 23807189), (23807508, 23807573), (23807760, 23807823), (23808029, 23818226), (23818611, 23818682), (23818611, 23818980), (23818611, 23819132)] 2021-10-25 09:33:44.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12682542, 12683136), (12683241, 12683314), (12684098, 12684157), (12684522, 12687715), (12688121, 12689208)] 2021-10-25 09:33:44.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20319337, 20319794), (20320022, 20321677), (20320688, 20321677), (20321127, 20321677), (20324224, 20324292), (20324411, 20324497), (20324411, 20324847), (20325121, 20325178), (20325330, 20325388), (20325537, 20325595)] 2021-10-25 09:33:44.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.161 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.161 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.161 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267204: ['FBtr0346361'] 2021-10-25 09:33:44.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267204 has a single transcript. 2021-10-25 09:33:44.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13394799, 13394864), (13394940, 13395055)] 2021-10-25 09:33:44.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1477288, 1477375), (1477288, 1477372), (1478229, 1481007)] 2021-10-25 09:33:44.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267205: ['FBtr0346360'] 2021-10-25 09:33:44.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267205 has a single transcript. 2021-10-25 09:33:44.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036066: ['FBtr0076316'] 2021-10-25 09:33:44.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036066 has a single transcript. 2021-10-25 09:33:44.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267206: ['FBtr0346362'] 2021-10-25 09:33:44.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267206 has a single transcript. 2021-10-25 09:33:44.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27109058, 27109126), (27109304, 27109450), (27109600, 27109681), (27109882, 27110133), (27110647, 27111270)] 2021-10-25 09:33:44.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036070: ['FBtr0076295'] 2021-10-25 09:33:44.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036070 has a single transcript. 2021-10-25 09:33:44.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267207: ['FBtr0346363'] 2021-10-25 09:33:44.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267207 has a single transcript. 2021-10-25 09:33:44.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036072: ['FBtr0076311'] 2021-10-25 09:33:44.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036072 has a single transcript. 2021-10-25 09:33:44.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267208: ['FBtr0346364'] 2021-10-25 09:33:44.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267208 has a single transcript. 2021-10-25 09:33:44.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001297: ['FBtr0099988', 'FBtr0099989', 'FBtr0099990', 'FBtr0290076', 'FBtr0339165'] 2021-10-25 09:33:44.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267209: ['FBtr0346365'] 2021-10-25 09:33:44.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267209 has a single transcript. 2021-10-25 09:33:44.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036075: ['FBtr0301227', 'FBtr0345693'] 2021-10-25 09:33:44.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267210: ['FBtr0346366'] 2021-10-25 09:33:44.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267210 has a single transcript. 2021-10-25 09:33:44.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267211: ['FBtr0346368'] 2021-10-25 09:33:44.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267211 has a single transcript. 2021-10-25 09:33:44.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267212: ['FBtr0346369'] 2021-10-25 09:33:44.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267212 has a single transcript. 2021-10-25 09:33:44.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267213: ['FBtr0346370'] 2021-10-25 09:33:44.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267213 has a single transcript. 2021-10-25 09:33:44.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267214: ['FBtr0346371'] 2021-10-25 09:33:44.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267214 has a single transcript. 2021-10-25 09:33:44.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10216299, 10216359)] 2021-10-25 09:33:44.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267215: ['FBtr0346372'] 2021-10-25 09:33:44.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267215 has a single transcript. 2021-10-25 09:33:44.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032519: ['FBtr0080523', 'FBtr0342636'] 2021-10-25 09:33:44.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267216: ['FBtr0346374'] 2021-10-25 09:33:44.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267216 has a single transcript. 2021-10-25 09:33:44.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260987: ['FBtr0113746', 'FBtr0344093'] 2021-10-25 09:33:44.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267217: ['FBtr0346373'] 2021-10-25 09:33:44.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267217 has a single transcript. 2021-10-25 09:33:44.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039488: ['FBtr0085131'] 2021-10-25 09:33:44.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039488 has a single transcript. 2021-10-25 09:33:44.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267218: ['FBtr0346386'] 2021-10-25 09:33:44.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039489: ['FBtr0085108'] 2021-10-25 09:33:44.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039489 has a single transcript. 2021-10-25 09:33:44.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267218 has a single transcript. 2021-10-25 09:33:44.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039490: ['FBtr0085109'] 2021-10-25 09:33:44.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039490 has a single transcript. 2021-10-25 09:33:44.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027532: ['FBtr0078486'] 2021-10-25 09:33:44.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027532 has a single transcript. 2021-10-25 09:33:44.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29767587, 29791392), (29773821, 29791392), (29773821, 29781690), (29781843, 29791392), (29783147, 29791392), (29790854, 29791392), (29791720, 29791786)] 2021-10-25 09:33:44.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:44.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039491: ['FBtr0085130'] 2021-10-25 09:33:44.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039491 has a single transcript. 2021-10-25 09:33:44.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027535: ['FBtr0086579'] 2021-10-25 09:33:44.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027535 has a single transcript. 2021-10-25 09:33:44.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27136869, 27136945), (27137236, 27140118), (27140242, 27146394), (27146574, 27146627), (27146883, 27146944), (27147695, 27156009), (27147695, 27147769), (27147997, 27156009), (27156171, 27157809)] 2021-10-25 09:33:44.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036078: ['FBtr0076300'] 2021-10-25 09:33:44.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036078 has a single transcript. 2021-10-25 09:33:44.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027537: ['FBtr0073828'] 2021-10-25 09:33:44.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027537 has a single transcript. 2021-10-25 09:33:44.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039492: ['FBtr0113297', 'FBtr0305050', 'FBtr0339264'] 2021-10-25 09:33:44.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036080: ['FBtr0076297'] 2021-10-25 09:33:44.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036080 has a single transcript. 2021-10-25 09:33:44.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027538: ['FBtr0087539'] 2021-10-25 09:33:44.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027538 has a single transcript. 2021-10-25 09:33:44.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036082: ['FBtr0076281', 'FBtr0076282'] 2021-10-25 09:33:44.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053113: ['FBtr0079040', 'FBtr0079041', 'FBtr0079042', 'FBtr0079043', 'FBtr0079044', 'FBtr0079038', 'FBtr0079039', 'FBtr0301538', 'FBtr0301539', 'FBtr0301540', 'FBtr0332413'] 2021-10-25 09:33:44.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027539: ['FBtr0084739', 'FBtr0331697'] 2021-10-25 09:33:44.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032520: ['FBtr0080522', 'FBtr0342635'] 2021-10-25 09:33:44.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10412901, 10412961)] 2021-10-25 09:33:44.407 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10412817, 10414774, 'FBtr0076281_exon_1') contains intron (10412901, 10412961) 2021-10-25 09:33:44.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076281_exon_1'] 2021-10-25 09:33:44.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260990: ['FBtr0333822', 'FBtr0085477'] 2021-10-25 09:33:44.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27126618, 27126693), (27126621, 27126693), (27127766, 27127836), (27128577, 27128638), (27128779, 27150393)] 2021-10-25 09:33:44.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24805585, 24806462), (24806619, 24806685), (24806917, 24806977), (24807480, 24808596), (24808665, 24808814), (24809045, 24809105), (24809245, 24809361), (24809486, 24813575)] 2021-10-25 09:33:44.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.439 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13396809, 13396873)] 2021-10-25 09:33:44.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267219: ['FBtr0346387', 'FBtr0346388'] 2021-10-25 09:33:44.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29750168, 29750227), (29750451, 29750511), (29750917, 29750980), (29751623, 29751693), (29751858, 29751923), (29752069, 29752138), (29752267, 29752328), (29752731, 29752829)] 2021-10-25 09:33:44.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036083: ['FBtr0076294'] 2021-10-25 09:33:44.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036083 has a single transcript. 2021-10-25 09:33:44.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036085: ['FBtr0076291', 'FBtr0344999'] 2021-10-25 09:33:44.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027544: ['FBtr0085630', 'FBtr0303200', 'FBtr0344523', 'FBtr0344524'] 2021-10-25 09:33:44.495 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:44.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032521: ['FBtr0080500', 'FBtr0345438'] 2021-10-25 09:33:44.515 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10557783, 10557864), (10558743, 10558805)] 2021-10-25 09:33:44.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001301: ['FBtr0081042', 'FBtr0081043'] 2021-10-25 09:33:44.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260991: ['FBtr0088961', 'FBtr0344892', 'FBtr0336908'] 2021-10-25 09:33:44.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039494: ['FBtr0085111', 'FBtr0085112'] 2021-10-25 09:33:44.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13399140, 13399217), (13399651, 13403223), (13403355, 13403475), (13403891, 13403953), (13404026, 13404407), (13405703, 13410507)] 2021-10-25 09:33:44.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267220: ['FBtr0346391'] 2021-10-25 09:33:44.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267220 has a single transcript. 2021-10-25 09:33:44.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18131520, 18131581), (18132609, 18132962), (18133525, 18133587), (18134826, 18135573), (18135975, 18137476)] 2021-10-25 09:33:44.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.563 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081042': ['FBtr0081043']} 2021-10-25 09:33:44.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267221: ['FBtr0346394'] 2021-10-25 09:33:44.563 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0081043']] 2021-10-25 09:33:44.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267221 has a single transcript. 2021-10-25 09:33:44.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30419023, 30419093), (30419484, 30421277), (30421353, 30421462)] 2021-10-25 09:33:44.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036089: ['FBtr0076280'] 2021-10-25 09:33:44.565 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30419093, 30421353, 'FBtr0085630_exon_2') contains intron (30419484, 30421277) 2021-10-25 09:33:44.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036089 has a single transcript. 2021-10-25 09:33:44.566 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30419093, 30422971, 'FBtr0303200_exon_1') contains intron (30419484, 30421277) 2021-10-25 09:33:44.566 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30421203, 30422971, 'FBtr0344523_exon_1') contains intron (30421353, 30421462) 2021-10-25 09:33:44.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085630_exon_2', 'FBtr0303200_exon_1', 'FBtr0344523_exon_1'] 2021-10-25 09:33:44.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27158117, 27158191), (27158364, 27158630), (27158844, 27158902), (27158951, 27159007), (27159201, 27159264)] 2021-10-25 09:33:44.568 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27157947, 27158364, 'FBtr0085111_exon_1') contains intron (27158117, 27158191) 2021-10-25 09:33:44.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085111_exon_1'] 2021-10-25 09:33:44.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267222: ['FBtr0346411'] 2021-10-25 09:33:44.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267222 has a single transcript. 2021-10-25 09:33:44.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036090: ['FBtr0076254', 'FBtr0076255'] 2021-10-25 09:33:44.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001308: ['FBtr0087184'] 2021-10-25 09:33:44.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001308 has a single transcript. 2021-10-25 09:33:44.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267223: ['FBtr0346395'] 2021-10-25 09:33:44.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267223 has a single transcript. 2021-10-25 09:33:44.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7278797, 7278860), (7279041, 7279106), (7280166, 7280229), (7280326, 7280473), (7280326, 7280470), (7281137, 7281293)] 2021-10-25 09:33:44.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267224: ['FBtr0346396'] 2021-10-25 09:33:44.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267224 has a single transcript. 2021-10-25 09:33:44.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001311: ['FBtr0078798', 'FBtr0078800', 'FBtr0301398'] 2021-10-25 09:33:44.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267225: ['FBtr0346397'] 2021-10-25 09:33:44.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267225 has a single transcript. 2021-10-25 09:33:44.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032522: ['FBtr0080501'] 2021-10-25 09:33:44.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032522 has a single transcript. 2021-10-25 09:33:44.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267226: ['FBtr0346398', 'FBtr0346399'] 2021-10-25 09:33:44.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4994277, 4994338), (4994444, 4994507), (4994716, 4994786), (4994994, 5004613), (4994994, 4997113), (4994994, 5008180), (4994994, 5004171), (4994994, 4999224), (4994994, 4995375), (4999385, 5000248), (5004207, 5004613), (5004207, 5008180), (5004774, 5006427), (5004774, 5006444), (5004774, 5006383)] 2021-10-25 09:33:44.615 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10638325, 10638422), (10638494, 10638553), (10638494, 10638565), (10638700, 10639214)] 2021-10-25 09:33:44.618 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.618 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032523: ['FBtr0080520'] 2021-10-25 09:33:44.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032523 has a single transcript. 2021-10-25 09:33:44.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039495: ['FBtr0085114'] 2021-10-25 09:33:44.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039495 has a single transcript. 2021-10-25 09:33:44.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032524: ['FBtr0080519'] 2021-10-25 09:33:44.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032524 has a single transcript. 2021-10-25 09:33:44.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039498: ['FBtr0085121'] 2021-10-25 09:33:44.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039498 has a single transcript. 2021-10-25 09:33:44.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032525: ['FBtr0080517', 'FBtr0080518'] 2021-10-25 09:33:44.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039500: ['FBtr0085181'] 2021-10-25 09:33:44.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039500 has a single transcript. 2021-10-25 09:33:44.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039501: ['FBtr0085180'] 2021-10-25 09:33:44.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039501 has a single transcript. 2021-10-25 09:33:44.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039503: ['FBtr0085177'] 2021-10-25 09:33:44.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039503 has a single transcript. 2021-10-25 09:33:44.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:44.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039504: ['FBtr0085157', 'FBtr0334728'] 2021-10-25 09:33:44.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5378529, 5378596), (5378820, 5378895), (5378997, 5379066), (5379432, 5379487), (5379688, 5380644), (5379688, 5380353), (5380530, 5381321), (5380821, 5381321), (5383252, 5383307), (5383578, 5383628), (5384858, 5384937), (5385181, 5385668), (5385862, 5392786)] 2021-10-25 09:33:44.677 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5378092, 5378820, 'FBtr0078800_exon_11') contains intron (5378529, 5378596) 2021-10-25 09:33:44.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036091: ['FBtr0076256'] 2021-10-25 09:33:44.678 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5378092, 5378820, 'FBtr0301398_exon_11') contains intron (5378529, 5378596) 2021-10-25 09:33:44.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036091 has a single transcript. 2021-10-25 09:33:44.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078800_exon_11', 'FBtr0301398_exon_11'] 2021-10-25 09:33:44.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036093: ['FBtr0076257', 'FBtr0076258'] 2021-10-25 09:33:44.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13449370, 13449436)] 2021-10-25 09:33:44.690 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13447537, 13449497, 'FBtr0080518_exon_1') contains intron (13449370, 13449436) 2021-10-25 09:33:44.691 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080518_exon_1'] 2021-10-25 09:33:44.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260995: ['FBtr0334939'] 2021-10-25 09:33:44.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260995 has a single transcript. 2021-10-25 09:33:44.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260996: ['FBtr0301799'] 2021-10-25 09:33:44.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260996 has a single transcript. 2021-10-25 09:33:44.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27265948, 27266012), (27265948, 27265996)] 2021-10-25 09:33:44.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0260997: ['FBtr0343637'] 2021-10-25 09:33:44.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027546: ['FBtr0070891'] 2021-10-25 09:33:44.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0260997 has a single transcript. 2021-10-25 09:33:44.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027546 has a single transcript. 2021-10-25 09:33:44.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267227: ['FBtr0346400'] 2021-10-25 09:33:44.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267227 has a single transcript. 2021-10-25 09:33:44.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027547: ['FBtr0072853', 'FBtr0333433'] 2021-10-25 09:33:44.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261004: ['FBtr0078743'] 2021-10-25 09:33:44.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261004 has a single transcript. 2021-10-25 09:33:44.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267228: ['FBtr0346401'] 2021-10-25 09:33:44.731 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267228 has a single transcript. 2021-10-25 09:33:44.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10641981, 10642048), (10642601, 10642703)] 2021-10-25 09:33:44.735 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10641888, 10642601, 'FBtr0076257_exon_1') contains intron (10641981, 10642048) 2021-10-25 09:33:44.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076257_exon_1'] 2021-10-25 09:33:44.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261006: ['FBtr0309752'] 2021-10-25 09:33:44.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261006 has a single transcript. 2021-10-25 09:33:44.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267229: ['FBtr0346412'] 2021-10-25 09:33:44.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267229 has a single transcript. 2021-10-25 09:33:44.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267230: ['FBtr0346402'] 2021-10-25 09:33:44.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267230 has a single transcript. 2021-10-25 09:33:44.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032530: ['FBtr0080515'] 2021-10-25 09:33:44.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032530 has a single transcript. 2021-10-25 09:33:44.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261014: ['FBtr0088391', 'FBtr0112905', 'FBtr0112906', 'FBtr0343852'] 2021-10-25 09:33:44.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267231: ['FBtr0346403'] 2021-10-25 09:33:44.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267231 has a single transcript. 2021-10-25 09:33:44.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032533: ['FBtr0080572'] 2021-10-25 09:33:44.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032533 has a single transcript. 2021-10-25 09:33:44.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267232: ['FBtr0346404'] 2021-10-25 09:33:44.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267232 has a single transcript. 2021-10-25 09:33:44.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1967139, 1967199), (1967502, 1969599), (1967502, 1968077)] 2021-10-25 09:33:44.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267233: ['FBtr0346413'] 2021-10-25 09:33:44.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267233 has a single transcript. 2021-10-25 09:33:44.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032535: ['FBtr0080554'] 2021-10-25 09:33:44.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032535 has a single transcript. 2021-10-25 09:33:44.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039505: ['FBtr0085158'] 2021-10-25 09:33:44.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039505 has a single transcript. 2021-10-25 09:33:44.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267234: ['FBtr0346405'] 2021-10-25 09:33:44.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267234 has a single transcript. 2021-10-25 09:33:44.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001313: ['FBtr0346722'] 2021-10-25 09:33:44.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001313 has a single transcript. 2021-10-25 09:33:44.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267235: ['FBtr0346406'] 2021-10-25 09:33:44.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267235 has a single transcript. 2021-10-25 09:33:44.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039507: ['FBtr0085174', 'FBtr0305971', 'FBtr0305972', 'FBtr0305973', 'FBtr0305974', 'FBtr0305975'] 2021-10-25 09:33:44.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032536: ['FBtr0100327', 'FBtr0343641'] 2021-10-25 09:33:44.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267236: ['FBtr0346409'] 2021-10-25 09:33:44.807 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267236 has a single transcript. 2021-10-25 09:33:44.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036094: ['FBtr0076259'] 2021-10-25 09:33:44.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036094 has a single transcript. 2021-10-25 09:33:44.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267237: ['FBtr0346407'] 2021-10-25 09:33:44.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267237 has a single transcript. 2021-10-25 09:33:44.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001316: ['FBtr0072565', 'FBtr0110818', 'FBtr0112807', 'FBtr0112808', 'FBtr0343526', 'FBtr0343527', 'FBtr0333850', 'FBtr0333851', 'FBtr0333852'] 2021-10-25 09:33:44.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267238: ['FBtr0346408'] 2021-10-25 09:33:44.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267238 has a single transcript. 2021-10-25 09:33:44.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036096: ['FBtr0076260', 'FBtr0331572'] 2021-10-25 09:33:44.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267239: ['FBtr0346410'] 2021-10-25 09:33:44.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267239 has a single transcript. 2021-10-25 09:33:44.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267240: ['FBtr0346414'] 2021-10-25 09:33:44.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267240 has a single transcript. 2021-10-25 09:33:44.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267241: ['FBtr0346431'] 2021-10-25 09:33:44.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267241 has a single transcript. 2021-10-25 09:33:44.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13915250, 13915398), (13915905, 13916405), (13916564, 13916620), (13916861, 13916925), (13917650, 13917976), (13918080, 13918146), (13918245, 13954716), (13954857, 13955264)] 2021-10-25 09:33:44.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027548: ['FBtr0088858', 'FBtr0088857', 'FBtr0339122'] 2021-10-25 09:33:44.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267242: ['FBtr0346432'] 2021-10-25 09:33:44.860 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267242 has a single transcript. 2021-10-25 09:33:44.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267243: ['FBtr0346424'] 2021-10-25 09:33:44.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267243 has a single transcript. 2021-10-25 09:33:44.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9989303, 9990470), (9989569, 9990470), (9990389, 9990470), (9990573, 9990659), (9992696, 9992762), (9992696, 9992765), (9992917, 9992983)] 2021-10-25 09:33:44.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10661781, 10661849), (10662623, 10662683)] 2021-10-25 09:33:44.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267244: ['FBtr0346425'] 2021-10-25 09:33:44.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267244 has a single transcript. 2021-10-25 09:33:44.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267245: ['FBtr0346416'] 2021-10-25 09:33:44.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267245 has a single transcript. 2021-10-25 09:33:44.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267246: ['FBtr0346434'] 2021-10-25 09:33:44.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267246 has a single transcript. 2021-10-25 09:33:44.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267247: ['FBtr0346433'] 2021-10-25 09:33:44.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267247 has a single transcript. 2021-10-25 09:33:44.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032538: ['FBtr0080558'] 2021-10-25 09:33:44.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032538 has a single transcript. 2021-10-25 09:33:44.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267248: ['FBtr0346435'] 2021-10-25 09:33:44.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267248 has a single transcript. 2021-10-25 09:33:44.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032549: ['FBtr0301695', 'FBtr0343710'] 2021-10-25 09:33:44.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267249: ['FBtr0346439'] 2021-10-25 09:33:44.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267249 has a single transcript. 2021-10-25 09:33:44.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7962603, 7962768), (7963393, 7963451), (7965326, 7969250), (7969508, 7969589)] 2021-10-25 09:33:44.926 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267252: ['FBtr0079795', 'FBtr0079796', 'FBtr0079797', 'FBtr0303895', 'FBtr0309247', 'FBtr0330019', 'FBtr0336620', 'FBtr0346282'] 2021-10-25 09:33:44.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036099: ['FBtr0076265'] 2021-10-25 09:33:44.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036099 has a single transcript. 2021-10-25 09:33:44.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27279103, 27279177), (27280042, 27280576), (27280042, 27280984), (27280042, 27280360), (27280042, 27280669), (27280042, 27281752), (27280042, 27282616)] 2021-10-25 09:33:44.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:44.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036101: ['FBtr0089571', 'FBtr0089569', 'FBtr0089570', 'FBtr0331575'] 2021-10-25 09:33:44.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14774372, 14774463), (14774619, 14774681), (14774624, 14774681), (14774727, 14774783)] 2021-10-25 09:33:44.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:44.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(436159, 436221), (436613, 436673), (436849, 440493), (436849, 443219), (436849, 437495), (443168, 443219), (443325, 443392), (443847, 443911), (444144, 444234), (444376, 444489), (444376, 444600), (444519, 444600), (445567, 445731), (445911, 447710), (445911, 449996), (450170, 451126), (451771, 452837), (451771, 454108), (453488, 454108), (454405, 462180), (462558, 489952), (462558, 505886), (506048, 506104), (506356, 507974), (508799, 514611), (508799, 539898), (514705, 539898)] 2021-10-25 09:33:45.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032551: ['FBtr0080688'] 2021-10-25 09:33:45.025 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032551 has a single transcript. 2021-10-25 09:33:45.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027549: ['FBtr0076684', 'FBtr0333949', 'FBtr0334615'] 2021-10-25 09:33:45.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261015: ['FBtr0332500', 'FBtr0332501', 'FBtr0332502', 'FBtr0301876', 'FBtr0433507'] 2021-10-25 09:33:45.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032553: ['FBtr0304003', 'FBtr0304004'] 2021-10-25 09:33:45.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10694726, 10695023), (10695367, 10695628), (10695415, 10695628), (10695704, 10696578), (10695704, 10696566)] 2021-10-25 09:33:45.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.050 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14870765, 14870825), (14871131, 14871182), (14871486, 14871552), (14871766, 14871819)] 2021-10-25 09:33:45.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8110654, 8110729), (8111106, 8111177), (8112044, 8112111), (8112438, 8112493), (8112714, 8112781), (8112714, 8113011)] 2021-10-25 09:33:45.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053116: ['FBtr0081249'] 2021-10-25 09:33:45.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053116 has a single transcript. 2021-10-25 09:33:45.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053117: ['FBtr0081309'] 2021-10-25 09:33:45.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053117 has a single transcript. 2021-10-25 09:33:45.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053120: ['FBtr0081118'] 2021-10-25 09:33:45.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053120 has a single transcript. 2021-10-25 09:33:45.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053121: ['FBtr0079557'] 2021-10-25 09:33:45.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053121 has a single transcript. 2021-10-25 09:33:45.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053124: ['FBtr0307522'] 2021-10-25 09:33:45.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053124 has a single transcript. 2021-10-25 09:33:45.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9256696, 9256892), (9256696, 9272465), (9256814, 9256892), (9257206, 9272465), (9257206, 9259267), (9259585, 9272465), (9272607, 9291055)] 2021-10-25 09:33:45.143 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9256562, 9257206, 'FBtr0079797_exon_1') contains intron (9256696, 9256892) 2021-10-25 09:33:45.144 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9256562, 9257206, 'FBtr0346282_exon_1') contains intron (9256696, 9256892) 2021-10-25 09:33:45.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079797_exon_1', 'FBtr0346282_exon_1'] 2021-10-25 09:33:45.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8774906, 8774970), (8775114, 8775182), (8775260, 8775317), (8777941, 8782285), (8782384, 8782441), (8784172, 8784439), (8784592, 8785729), (8786008, 8786521), (8786623, 8786697), (8786925, 8793103), (8786925, 8790508), (8790667, 8792441), (8793367, 8793977), (8793367, 8796704), (8794091, 8796704), (8796936, 8797323), (8798046, 8800874), (8798046, 8799461), (8798046, 8800693), (8800779, 8800874)] 2021-10-25 09:33:45.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053125: ['FBtr0302456', 'FBtr0332514'] 2021-10-25 09:33:45.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032554: ['FBtr0080683', 'FBtr0305558', 'FBtr0343682'] 2021-10-25 09:33:45.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039508: ['FBtr0085163'] 2021-10-25 09:33:45.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039508 has a single transcript. 2021-10-25 09:33:45.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036102: ['FBtr0076266', 'FBtr0339801'] 2021-10-25 09:33:45.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039509: ['FBtr0085173'] 2021-10-25 09:33:45.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039509 has a single transcript. 2021-10-25 09:33:45.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027550: ['FBtr0080114'] 2021-10-25 09:33:45.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027550 has a single transcript. 2021-10-25 09:33:45.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2649967, 2650032), (2652062, 2652122)] 2021-10-25 09:33:45.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2648359, 2652062, 'FBtr0302456_exon_2') contains intron (2649967, 2650032) 2021-10-25 09:33:45.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302456_exon_2'] 2021-10-25 09:33:45.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027552: ['FBtr0073171'] 2021-10-25 09:33:45.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027552 has a single transcript. 2021-10-25 09:33:45.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039510: ['FBtr0273192'] 2021-10-25 09:33:45.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039510 has a single transcript. 2021-10-25 09:33:45.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14875431, 14875505), (14875436, 14875505), (14875450, 14875505), (14875697, 14875756), (14875947, 14876001), (14876098, 14876155)] 2021-10-25 09:33:45.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027553: ['FBtr0071077'] 2021-10-25 09:33:45.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027553 has a single transcript. 2021-10-25 09:33:45.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027554: ['FBtr0076766'] 2021-10-25 09:33:45.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027554 has a single transcript. 2021-10-25 09:33:45.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039511: ['FBtr0085170'] 2021-10-25 09:33:45.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039511 has a single transcript. 2021-10-25 09:33:45.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039518: ['FBtr0085182'] 2021-10-25 09:33:45.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039518 has a single transcript. 2021-10-25 09:33:45.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027556: ['FBtr0074344', 'FBtr0074345', 'FBtr0342973'] 2021-10-25 09:33:45.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:45.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039519: ['FBtr0085183', 'FBtr0339319'] 2021-10-25 09:33:45.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053126: ['FBtr0077942', 'FBtr0329947', 'FBtr0343844'] 2021-10-25 09:33:45.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27479808, 27479867)] 2021-10-25 09:33:45.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16914220, 16928614), (16925318, 16928614), (16928742, 16933403), (16933538, 16934037), (16934443, 16934867), (16935721, 16936503), (16935721, 16935807)] 2021-10-25 09:33:45.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036104: ['FBtr0076274'] 2021-10-25 09:33:45.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036104 has a single transcript. 2021-10-25 09:33:45.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036105: ['FBtr0076269', 'FBtr0333403'] 2021-10-25 09:33:45.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1360373, 1360491), (1360590, 1360656), (1360736, 1360795), (1360926, 1361457), (1361578, 1361640)] 2021-10-25 09:33:45.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032563: ['FBtr0080743'] 2021-10-25 09:33:45.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032563 has a single transcript. 2021-10-25 09:33:45.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032577: ['FBtr0080792'] 2021-10-25 09:33:45.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032577 has a single transcript. 2021-10-25 09:33:45.336 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077942': ['FBtr0329947']} 2021-10-25 09:33:45.337 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329947']] 2021-10-25 09:33:45.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10879313, 10879367)] 2021-10-25 09:33:45.340 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.340 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032582: ['FBtr0080853', 'FBtr0305564'] 2021-10-25 09:33:45.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039520: ['FBtr0085184'] 2021-10-25 09:33:45.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039520 has a single transcript. 2021-10-25 09:33:45.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261016: ['FBtr0305178'] 2021-10-25 09:33:45.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261016 has a single transcript. 2021-10-25 09:33:45.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039521: ['FBtr0085213'] 2021-10-25 09:33:45.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039521 has a single transcript. 2021-10-25 09:33:45.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261019: ['FBtr0299938'] 2021-10-25 09:33:45.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261019 has a single transcript. 2021-10-25 09:33:45.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039522: ['FBtr0085212'] 2021-10-25 09:33:45.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039522 has a single transcript. 2021-10-25 09:33:45.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261020: ['FBtr0079614'] 2021-10-25 09:33:45.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261020 has a single transcript. 2021-10-25 09:33:45.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039523: ['FBtr0085185', 'FBtr0321256'] 2021-10-25 09:33:45.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053127: ['FBtr0078052'] 2021-10-25 09:33:45.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053127 has a single transcript. 2021-10-25 09:33:45.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16292730, 16292959), (16292754, 16292959)] 2021-10-25 09:33:45.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261041: ['FBtr0087631', 'FBtr0304694', 'FBtr0304695'] 2021-10-25 09:33:45.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027558: ['FBtr0089061'] 2021-10-25 09:33:45.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027558 has a single transcript. 2021-10-25 09:33:45.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053128: ['FBtr0077930'] 2021-10-25 09:33:45.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053128 has a single transcript. 2021-10-25 09:33:45.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036106: ['FBtr0076273', 'FBtr0346544'] 2021-10-25 09:33:45.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027560: ['FBtr0077431'] 2021-10-25 09:33:45.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027560 has a single transcript. 2021-10-25 09:33:45.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053129: ['FBtr0080169', 'FBtr0080170', 'FBtr0080171', 'FBtr0080172', 'FBtr0340550', 'FBtr0340551', 'FBtr0340552'] 2021-10-25 09:33:45.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27521015, 27530786), (27530451, 27530786), (27530849, 27530922), (27531085, 27531284)] 2021-10-25 09:33:45.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027561: ['FBtr0088626', 'FBtr0302497', 'FBtr0302498', 'FBtr0306381', 'FBtr0306382', 'FBtr0339371', 'FBtr0339372'] 2021-10-25 09:33:45.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001319: ['FBtr0087465', 'FBtr0112809', 'FBtr0112810', 'FBtr0301400', 'FBtr0329882'] 2021-10-25 09:33:45.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032585: ['FBtr0080865'] 2021-10-25 09:33:45.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032585 has a single transcript. 2021-10-25 09:33:45.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10881862, 10882006)] 2021-10-25 09:33:45.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13806718, 13806796), (13806878, 13807731), (13807836, 13807898), (13808175, 13809274), (13809669, 13809913), (13810363, 13810478), (13810619, 13810752), (13810836, 13811197), (13810836, 13813799), (13810836, 13812437), (13811254, 13813799), (13812491, 13813799), (13813880, 13813940), (13814015, 13814076), (13814184, 13814242), (13814314, 13814378), (13814581, 13814643), (13814786, 13815554), (13814786, 13814967), (13815024, 13815554), (13815648, 13816202), (13815648, 13816035), (13816083, 13816202), (13816313, 13816385), (13816504, 13816561), (13816701, 13816754), (13816979, 13817066), (13817609, 13817887)] 2021-10-25 09:33:45.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032586: ['FBtr0080866', 'FBtr0080867', 'FBtr0333486', 'FBtr0333487', 'FBtr0333488'] 2021-10-25 09:33:45.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267253: ['FBtr0071373', 'FBtr0071374'] 2021-10-25 09:33:45.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039525: ['FBtr0085210'] 2021-10-25 09:33:45.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039525 has a single transcript. 2021-10-25 09:33:45.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039527: ['FBtr0085202'] 2021-10-25 09:33:45.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039527 has a single transcript. 2021-10-25 09:33:45.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039528: ['FBtr0301390', 'FBtr0335247'] 2021-10-25 09:33:45.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036107: ['FBtr0076270'] 2021-10-25 09:33:45.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036107 has a single transcript. 2021-10-25 09:33:45.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036108: ['FBtr0076191'] 2021-10-25 09:33:45.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036108 has a single transcript. 2021-10-25 09:33:45.544 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9505027, 9506170), (9507262, 9510159), (9510664, 9550433), (9510664, 9550429)] 2021-10-25 09:33:45.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036109: ['FBtr0076192'] 2021-10-25 09:33:45.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036109 has a single transcript. 2021-10-25 09:33:45.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036110: ['FBtr0076193'] 2021-10-25 09:33:45.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036110 has a single transcript. 2021-10-25 09:33:45.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27599192, 27599256), (27599338, 27599491), (27599578, 27599639), (27602469, 27602797), (27602945, 27603013), (27603171, 27603250), (27603487, 27606768)] 2021-10-25 09:33:45.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14774007, 14774179), (14774007, 14774968), (14774645, 14774968), (14775258, 14775322), (14775261, 14775322), (14775467, 14775538), (14775470, 14775538), (14775820, 14776005), (14775820, 14776068), (14776168, 14776252), (14776186, 14776252), (14776334, 14785841), (14785910, 14787446), (14787520, 14793501), (14793557, 14793622), (14793840, 14796777), (14793840, 14798254), (14798623, 14806849)] 2021-10-25 09:33:45.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036111: ['FBtr0076250', 'FBtr0076251', 'FBtr0076252'] 2021-10-25 09:33:45.583 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10965719, 10965791), (10965910, 10965992), (10966409, 10968437), (10966409, 10966501), (10966621, 10967855), (10966621, 10968104), (10966621, 10968133), (10968583, 10968691), (10968896, 10968961), (10969576, 10969632), (10969928, 10970001)] 2021-10-25 09:33:45.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16492051, 16505495), (16492051, 16497010), (16497151, 16505495), (16502074, 16505495), (16505948, 16506007), (16506852, 16506928)] 2021-10-25 09:33:45.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267254: ['FBtr0346470'] 2021-10-25 09:33:45.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267254 has a single transcript. 2021-10-25 09:33:45.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261046: ['FBtr0330211', 'FBtr0330212', 'FBtr0113397', 'FBtr0113398'] 2021-10-25 09:33:45.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039529: ['FBtr0085200'] 2021-10-25 09:33:45.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039529 has a single transcript. 2021-10-25 09:33:45.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267255: ['FBtr0346474'] 2021-10-25 09:33:45.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267255 has a single transcript. 2021-10-25 09:33:45.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9124139, 9124743), (9124145, 9124743), (9124145, 9125550), (9125220, 9125550), (9126066, 9126180), (9126066, 9127418), (9126066, 9127026), (9126213, 9127026), (9126213, 9127418), (9127162, 9127418), (9127877, 9127936), (9128197, 9128256), (9128310, 9128370), (9128641, 9131163), (9131358, 9131482)] 2021-10-25 09:33:45.619 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9124743, 9126066, 'FBtr0306382_exon_7') contains intron (9125220, 9125550) 2021-10-25 09:33:45.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306382_exon_7'] 2021-10-25 09:33:45.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267256: ['FBtr0346469'] 2021-10-25 09:33:45.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267256 has a single transcript. 2021-10-25 09:33:45.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10896409, 10896468), (10896624, 10896778), (10896877, 10897897), (10896877, 10897977), (10898444, 10898735)] 2021-10-25 09:33:45.628 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10897977, 10899123, 'FBtr0076251_exon_1') contains intron (10898444, 10898735) 2021-10-25 09:33:45.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076251_exon_1'] 2021-10-25 09:33:45.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039530: ['FBtr0302589', 'FBtr0302590', 'FBtr0335245', 'FBtr0335246'] 2021-10-25 09:33:45.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267257: ['FBtr0346471'] 2021-10-25 09:33:45.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267257 has a single transcript. 2021-10-25 09:33:45.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267258: ['FBtr0346472'] 2021-10-25 09:33:45.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267258 has a single transcript. 2021-10-25 09:33:45.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267259: ['FBtr0346473'] 2021-10-25 09:33:45.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267259 has a single transcript. 2021-10-25 09:33:45.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267260: ['FBtr0346475'] 2021-10-25 09:33:45.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267260 has a single transcript. 2021-10-25 09:33:45.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267261: ['FBtr0346476'] 2021-10-25 09:33:45.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267261 has a single transcript. 2021-10-25 09:33:45.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267262: ['FBtr0346477'] 2021-10-25 09:33:45.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267262 has a single transcript. 2021-10-25 09:33:45.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267263: ['FBtr0346478'] 2021-10-25 09:33:45.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267263 has a single transcript. 2021-10-25 09:33:45.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267264: ['FBtr0346479'] 2021-10-25 09:33:45.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267264 has a single transcript. 2021-10-25 09:33:45.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267265: ['FBtr0346481'] 2021-10-25 09:33:45.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267265 has a single transcript. 2021-10-25 09:33:45.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17474916, 17475079), (17475005, 17475079), (17475343, 17475643), (17475343, 17475652), (17475917, 17476047), (17476275, 17476458), (17476707, 17476894), (17477058, 17477544), (17477860, 17478572), (17478698, 17479109), (17479484, 17479712), (17479892, 17480210), (17480366, 17480442), (17480751, 17481505), (17481649, 17481738), (17481994, 17482157), (17482368, 17482710), (17483230, 17483294), (17483447, 17483821), (17483941, 17484260), (17484396, 17484750), (17484896, 17484990), (17485140, 17485212), (17485344, 17487257), (17487462, 17487789), (17487890, 17487989), (17488117, 17489703), (17489927, 17490285), (17490403, 17491726), (17491847, 17492029), (17492179, 17492435), (17492597, 17494086), (17494229, 17497354), (17497574, 17498265), (17498548, 17504039), (17498548, 17502544), (17502949, 17504039), (17504183, 17505592)] 2021-10-25 09:33:45.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267266: ['FBtr0346482'] 2021-10-25 09:33:45.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267266 has a single transcript. 2021-10-25 09:33:45.712 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17484990, 17485344, 'FBtr0113397_exon_15') contains intron (17485140, 17485212) 2021-10-25 09:33:45.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113397_exon_15'] 2021-10-25 09:33:45.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267267: ['FBtr0346483'] 2021-10-25 09:33:45.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267267 has a single transcript. 2021-10-25 09:33:45.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27608569, 27615292), (27613375, 27615292), (27615490, 27629347), (27629512, 27629569), (27630029, 27630091), (27630609, 27630667), (27630896, 27630954), (27631226, 27631288), (27631226, 27631291), (27633205, 27633261), (27633597, 27633654), (27633597, 27633660), (27633846, 27633909)] 2021-10-25 09:33:45.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267268: ['FBtr0346484'] 2021-10-25 09:33:45.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267268 has a single transcript. 2021-10-25 09:33:45.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036112: ['FBtr0076194'] 2021-10-25 09:33:45.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036112 has a single transcript. 2021-10-25 09:33:45.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267269: ['FBtr0346486'] 2021-10-25 09:33:45.738 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267269 has a single transcript. 2021-10-25 09:33:45.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267270: ['FBtr0346487'] 2021-10-25 09:33:45.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267270 has a single transcript. 2021-10-25 09:33:45.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036116: ['FBtr0076201', 'FBtr0076199', 'FBtr0076200'] 2021-10-25 09:33:45.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267271: ['FBtr0346485'] 2021-10-25 09:33:45.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267271 has a single transcript. 2021-10-25 09:33:45.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267272: ['FBtr0346489'] 2021-10-25 09:33:45.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267272 has a single transcript. 2021-10-25 09:33:45.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032587: ['FBtr0080873', 'FBtr0080874', 'FBtr0301144', 'FBtr0337091'] 2021-10-25 09:33:45.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267273: ['FBtr0346488'] 2021-10-25 09:33:45.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267273 has a single transcript. 2021-10-25 09:33:45.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001320: ['FBtr0078283', 'FBtr0344836'] 2021-10-25 09:33:45.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267274: ['FBtr0346490'] 2021-10-25 09:33:45.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267274 has a single transcript. 2021-10-25 09:33:45.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267275: ['FBtr0346491'] 2021-10-25 09:33:45.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267275 has a single transcript. 2021-10-25 09:33:45.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267276: ['FBtr0346492'] 2021-10-25 09:33:45.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267276 has a single transcript. 2021-10-25 09:33:45.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267277: ['FBtr0346493'] 2021-10-25 09:33:45.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267277 has a single transcript. 2021-10-25 09:33:45.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11054359, 11057553), (11055853, 11057553), (11057185, 11057553), (11057707, 11057765), (11057952, 11058014), (11058640, 11058700), (11058876, 11058944), (11059100, 11059158)] 2021-10-25 09:33:45.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20694047, 20694262), (20694340, 20695074), (20694340, 20694441)] 2021-10-25 09:33:45.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267278: ['FBtr0346494'] 2021-10-25 09:33:45.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267278 has a single transcript. 2021-10-25 09:33:45.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267279: ['FBtr0346495'] 2021-10-25 09:33:45.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267279 has a single transcript. 2021-10-25 09:33:45.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267280: ['FBtr0346496'] 2021-10-25 09:33:45.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267280 has a single transcript. 2021-10-25 09:33:45.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267281: ['FBtr0346497'] 2021-10-25 09:33:45.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267281 has a single transcript. 2021-10-25 09:33:45.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267282: ['FBtr0346498'] 2021-10-25 09:33:45.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267282 has a single transcript. 2021-10-25 09:33:45.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16511446, 16519969), (16511446, 16527389), (16528439, 16532720), (16528439, 16532458)] 2021-10-25 09:33:45.864 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.865 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261049: ['FBtr0082070'] 2021-10-25 09:33:45.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261049 has a single transcript. 2021-10-25 09:33:45.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267283: ['FBtr0346500'] 2021-10-25 09:33:45.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267283 has a single transcript. 2021-10-25 09:33:45.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039531: ['FBtr0085199', 'FBtr0344340'] 2021-10-25 09:33:45.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053136: ['FBtr0086653', 'FBtr0340390', 'FBtr0340391'] 2021-10-25 09:33:45.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267284: ['FBtr0346503'] 2021-10-25 09:33:45.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267284 has a single transcript. 2021-10-25 09:33:45.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001321: ['FBtr0082194'] 2021-10-25 09:33:45.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001321 has a single transcript. 2021-10-25 09:33:45.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261053: ['FBtr0301933', 'FBtr0304663', 'FBtr0304664', 'FBtr0304665', 'FBtr0304666'] 2021-10-25 09:33:45.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267285: ['FBtr0346504'] 2021-10-25 09:33:45.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267285 has a single transcript. 2021-10-25 09:33:45.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001323: ['FBtr0078212', 'FBtr0346815'] 2021-10-25 09:33:45.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267286: ['FBtr0346501'] 2021-10-25 09:33:45.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267286 has a single transcript. 2021-10-25 09:33:45.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267287: ['FBtr0346502'] 2021-10-25 09:33:45.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267287 has a single transcript. 2021-10-25 09:33:45.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267288: ['FBtr0346573'] 2021-10-25 09:33:45.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267288 has a single transcript. 2021-10-25 09:33:45.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267289: ['FBtr0346574'] 2021-10-25 09:33:45.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267289 has a single transcript. 2021-10-25 09:33:45.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27635104, 27635165)] 2021-10-25 09:33:45.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027562: ['FBtr0083360'] 2021-10-25 09:33:45.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027562 has a single transcript. 2021-10-25 09:33:45.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036117: ['FBtr0076242'] 2021-10-25 09:33:45.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036117 has a single transcript. 2021-10-25 09:33:45.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027563: ['FBtr0082898'] 2021-10-25 09:33:45.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027563 has a single transcript. 2021-10-25 09:33:45.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267290: ['FBtr0346575'] 2021-10-25 09:33:45.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267290 has a single transcript. 2021-10-25 09:33:45.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036118: ['FBtr0076202'] 2021-10-25 09:33:45.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036118 has a single transcript. 2021-10-25 09:33:45.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20599980, 20602192), (20602270, 20617387), (20617460, 20619741)] 2021-10-25 09:33:45.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18665133, 18665190), (18665148, 18665190), (18665597, 18665649)] 2021-10-25 09:33:45.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:45.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:45.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027564: ['FBtr0070846'] 2021-10-25 09:33:45.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027564 has a single transcript. 2021-10-25 09:33:45.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267291: ['FBtr0346576'] 2021-10-25 09:33:45.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267291 has a single transcript. 2021-10-25 09:33:45.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036121: ['FBtr0076239'] 2021-10-25 09:33:45.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036121 has a single transcript. 2021-10-25 09:33:45.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267292: ['FBtr0346577'] 2021-10-25 09:33:45.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267292 has a single transcript. 2021-10-25 09:33:45.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027565: ['FBtr0078238'] 2021-10-25 09:33:45.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027565 has a single transcript. 2021-10-25 09:33:45.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036124: ['FBtr0076207'] 2021-10-25 09:33:45.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036124 has a single transcript. 2021-10-25 09:33:45.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036125: ['FBtr0076235', 'FBtr0301365'] 2021-10-25 09:33:45.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027567: ['FBtr0076340', 'FBtr0076339'] 2021-10-25 09:33:45.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267293: ['FBtr0346578'] 2021-10-25 09:33:45.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267293 has a single transcript. 2021-10-25 09:33:45.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267294: ['FBtr0346580'] 2021-10-25 09:33:45.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267294 has a single transcript. 2021-10-25 09:33:45.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267295: ['FBtr0346550'] 2021-10-25 09:33:45.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267295 has a single transcript. 2021-10-25 09:33:45.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039532: ['FBtr0085192', 'FBtr0085193', 'FBtr0085191'] 2021-10-25 09:33:45.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267296: ['FBtr0346551'] 2021-10-25 09:33:45.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267296 has a single transcript. 2021-10-25 09:33:45.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001324: ['FBtr0074884', 'FBtr0304716'] 2021-10-25 09:33:46.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267297: ['FBtr0346552'] 2021-10-25 09:33:46.000 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267297 has a single transcript. 2021-10-25 09:33:46.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10827340, 10837856), (10827996, 10837856), (10838650, 10839249), (10838650, 10839427), (10839333, 10839427), (10839553, 10839621), (10839771, 10839827), (10839942, 10841791), (10841984, 10842851), (10844169, 10844232), (10844169, 10844214), (10844363, 10845029), (10844363, 10845578), (10845120, 10845578), (10845775, 10845844)] 2021-10-25 09:33:46.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267298: ['FBtr0346553'] 2021-10-25 09:33:46.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267298 has a single transcript. 2021-10-25 09:33:46.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9864802, 9865057), (9864802, 9865079), (9865398, 9866313), (9866361, 9867313), (9867744, 9868253), (9868935, 9868998), (9869322, 9869445), (9870098, 9870157)] 2021-10-25 09:33:46.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11094139, 11094194), (11094355, 11094547), (11095642, 11095738)] 2021-10-25 09:33:46.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032588: ['FBtr0080872', 'FBtr0335499'] 2021-10-25 09:33:46.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267299: ['FBtr0346554'] 2021-10-25 09:33:46.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267299 has a single transcript. 2021-10-25 09:33:46.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267300: ['FBtr0346555'] 2021-10-25 09:33:46.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267300 has a single transcript. 2021-10-25 09:33:46.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267301: ['FBtr0346556'] 2021-10-25 09:33:46.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267301 has a single transcript. 2021-10-25 09:33:46.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053137: ['FBtr0310497'] 2021-10-25 09:33:46.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053137 has a single transcript. 2021-10-25 09:33:46.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19837288, 19837349), (19840017, 19840091), (19841805, 19841863), (19842232, 19842291), (19842606, 19842677), (19842989, 19843193), (19843129, 19843193), (19843500, 19843564)] 2021-10-25 09:33:46.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267302: ['FBtr0346557'] 2021-10-25 09:33:46.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267302 has a single transcript. 2021-10-25 09:33:46.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27636575, 27637837), (27636836, 27637837), (27637053, 27637837), (27638003, 27638072), (27638305, 27638378), (27638539, 27638622)] 2021-10-25 09:33:46.049 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053138: ['FBtr0087732'] 2021-10-25 09:33:46.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053138 has a single transcript. 2021-10-25 09:33:46.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267303: ['FBtr0346558'] 2021-10-25 09:33:46.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267303 has a single transcript. 2021-10-25 09:33:46.062 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16549646, 16549702)] 2021-10-25 09:33:46.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053140: ['FBtr0089046'] 2021-10-25 09:33:46.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053140 has a single transcript. 2021-10-25 09:33:46.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267304: ['FBtr0346559'] 2021-10-25 09:33:46.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267304 has a single transcript. 2021-10-25 09:33:46.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036126: ['FBtr0076234', 'FBtr0332706'] 2021-10-25 09:33:46.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027568: ['FBtr0080054', 'FBtr0332198'] 2021-10-25 09:33:46.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267305: ['FBtr0346561'] 2021-10-25 09:33:46.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267305 has a single transcript. 2021-10-25 09:33:46.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053143: ['FBtr0071858', 'FBtr0343008', 'FBtr0343009', 'FBtr0343010'] 2021-10-25 09:33:46.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267306: ['FBtr0346560'] 2021-10-25 09:33:46.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267306 has a single transcript. 2021-10-25 09:33:46.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267307: ['FBtr0346562'] 2021-10-25 09:33:46.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267307 has a single transcript. 2021-10-25 09:33:46.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001325: ['FBtr0072449', 'FBtr0333162'] 2021-10-25 09:33:46.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267308: ['FBtr0346563'] 2021-10-25 09:33:46.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267308 has a single transcript. 2021-10-25 09:33:46.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267309: ['FBtr0346564'] 2021-10-25 09:33:46.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267309 has a single transcript. 2021-10-25 09:33:46.116 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10358437, 10358501), (10358648, 10358710), (10359938, 10360002), (10361361, 10361421), (10361584, 10361665), (10361955, 10362013), (10362397, 10362462)] 2021-10-25 09:33:46.117 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.117 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11097872, 11097999)] 2021-10-25 09:33:46.117 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032590: ['FBtr0080871'] 2021-10-25 09:33:46.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032590 has a single transcript. 2021-10-25 09:33:46.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267310: ['FBtr0346565'] 2021-10-25 09:33:46.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267310 has a single transcript. 2021-10-25 09:33:46.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032593: ['FBtr0080945', 'FBtr0080946', 'FBtr0335144'] 2021-10-25 09:33:46.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267311: ['FBtr0346566'] 2021-10-25 09:33:46.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267311 has a single transcript. 2021-10-25 09:33:46.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267312: ['FBtr0346567'] 2021-10-25 09:33:46.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267312 has a single transcript. 2021-10-25 09:33:46.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267313: ['FBtr0346568'] 2021-10-25 09:33:46.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267313 has a single transcript. 2021-10-25 09:33:46.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25226988, 25227361)] 2021-10-25 09:33:46.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267314: ['FBtr0346595'] 2021-10-25 09:33:46.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267314 has a single transcript. 2021-10-25 09:33:46.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267315: ['FBtr0346596'] 2021-10-25 09:33:46.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267315 has a single transcript. 2021-10-25 09:33:46.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039536: ['FBtr0330108', 'FBtr0330109', 'FBtr0330110', 'FBtr0330111', 'FBtr0330112'] 2021-10-25 09:33:46.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267316: ['FBtr0346599'] 2021-10-25 09:33:46.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267316 has a single transcript. 2021-10-25 09:33:46.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22614721, 22619804), (22621159, 22622158), (22622300, 22627799), (22622300, 22627805), (22627948, 22628012), (22628176, 22628362), (22628557, 22631630), (22628557, 22631513), (22628557, 22628873), (22628926, 22629909), (22630627, 22631630), (22631561, 22631630), (22631828, 22631895)] 2021-10-25 09:33:46.172 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22631513, 22631828, 'FBtr0343008_exon_7') contains intron (22631561, 22631630) 2021-10-25 09:33:46.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343008_exon_7'] 2021-10-25 09:33:46.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036128: ['FBtr0113161'] 2021-10-25 09:33:46.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036128 has a single transcript. 2021-10-25 09:33:46.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267317: ['FBtr0346598'] 2021-10-25 09:33:46.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267317 has a single transcript. 2021-10-25 09:33:46.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027569: ['FBtr0076717', 'FBtr0345035', 'FBtr0332136'] 2021-10-25 09:33:46.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036131: ['FBtr0076209'] 2021-10-25 09:33:46.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036131 has a single transcript. 2021-10-25 09:33:46.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267318: ['FBtr0346600'] 2021-10-25 09:33:46.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267318 has a single transcript. 2021-10-25 09:33:46.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16665110, 16665161), (16665280, 16665341), (16665617, 16665918), (16666281, 16666355), (16666284, 16666355), (16666581, 16666649), (16666844, 16666915), (16667111, 16667167), (16667284, 16667452), (16667721, 16667777), (16668073, 16668142), (16668377, 16668435), (16668618, 16668680), (16669013, 16669069), (16669438, 16669498), (16669677, 16671768), (16669677, 16675422), (16671811, 16675422), (16675552, 16676570)] 2021-10-25 09:33:46.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036133: ['FBtr0076210'] 2021-10-25 09:33:46.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036133 has a single transcript. 2021-10-25 09:33:46.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267319: ['FBtr0346601'] 2021-10-25 09:33:46.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267319 has a single transcript. 2021-10-25 09:33:46.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267320: ['FBtr0346602'] 2021-10-25 09:33:46.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267320 has a single transcript. 2021-10-25 09:33:46.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261054: ['FBtr0301934'] 2021-10-25 09:33:46.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261054 has a single transcript. 2021-10-25 09:33:46.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267321: ['FBtr0346603'] 2021-10-25 09:33:46.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267321 has a single transcript. 2021-10-25 09:33:46.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036134: ['FBtr0300783', 'FBtr0300784', 'FBtr0300785', 'FBtr0300786', 'FBtr0301967', 'FBtr0332652', 'FBtr0332653', 'FBtr0332654'] 2021-10-25 09:33:46.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001330: ['FBtr0070419', 'FBtr0342769'] 2021-10-25 09:33:46.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261055: ['FBtr0301935', 'FBtr0333233'] 2021-10-25 09:33:46.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267322: ['FBtr0346604'] 2021-10-25 09:33:46.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267322 has a single transcript. 2021-10-25 09:33:46.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267323: ['FBtr0346605'] 2021-10-25 09:33:46.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267323 has a single transcript. 2021-10-25 09:33:46.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267326: ['FBtr0079478', 'FBtr0079479'] 2021-10-25 09:33:46.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8283213, 8283275), (8283614, 8283772), (8284004, 8284068), (8284293, 8286126), (8284293, 8287313), (8287374, 8287608), (8287757, 8287827), (8288220, 8289169), (8289483, 8289712)] 2021-10-25 09:33:46.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.251 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2238173, 2238233), (2238436, 2238498), (2241506, 2241567), (2241759, 2241827)] 2021-10-25 09:33:46.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5943132, 5943202)] 2021-10-25 09:33:46.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7711203, 7711831), (7711601, 7711831), (7712127, 7712182), (7712238, 7712303), (7712427, 7712482), (7712816, 7712876), (7713028, 7713095), (7713224, 7713279), (7713480, 7713538)] 2021-10-25 09:33:46.273 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27662497, 27663186), (27663441, 27664096), (27664123, 27664415), (27664436, 27664492), (27664825, 27664880), (27665180, 27665237), (27665375, 27665428), (27665742, 27665799), (27665999, 27666063), (27666194, 27666426), (27666245, 27666426), (27666539, 27667099), (27666539, 27667108), (27666539, 27666784), (27666802, 27667099), (27666802, 27667108), (27667244, 27667364), (27667800, 27667870), (27668068, 27668468), (27668068, 27668411), (27668754, 27668810), (27668913, 27668972), (27668916, 27668972), (27669590, 27669650), (27670383, 27670440), (27670578, 27670638), (27670937, 27670993), (27671172, 27671225), (27671799, 27671889), (27672447, 27672503), (27672807, 27672868), (27673818, 27673873), (27675331, 27675711), (27675880, 27675940), (27675880, 27675949), (27675997, 27676054), (27676605, 27676661)] 2021-10-25 09:33:46.282 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27675949, 27676605, 'FBtr0330108_exon_28') contains intron (27675997, 27676054) 2021-10-25 09:33:46.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27675940, 27676605, 'FBtr0330110_exon_29') contains intron (27675997, 27676054) 2021-10-25 09:33:46.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27675940, 27676605, 'FBtr0330111_exon_29') contains intron (27675997, 27676054) 2021-10-25 09:33:46.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27675949, 27676605, 'FBtr0330112_exon_28') contains intron (27675997, 27676054) 2021-10-25 09:33:46.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330108_exon_28', 'FBtr0330110_exon_29', 'FBtr0330111_exon_29', 'FBtr0330112_exon_28'] 2021-10-25 09:33:46.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032595: ['FBtr0080937'] 2021-10-25 09:33:46.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032595 has a single transcript. 2021-10-25 09:33:46.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032596: ['FBtr0080936', 'FBtr0335142'] 2021-10-25 09:33:46.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001341: ['FBtr0070119'] 2021-10-25 09:33:46.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001341 has a single transcript. 2021-10-25 09:33:46.307 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330108': ['FBtr0330112']} 2021-10-25 09:33:46.308 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330112']] 2021-10-25 09:33:46.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261057: ['FBtr0301937', 'FBtr0345686'] 2021-10-25 09:33:46.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001404: ['FBtr0070439', 'FBtr0070440', 'FBtr0340091'] 2021-10-25 09:33:46.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053144: ['FBtr0088254', 'FBtr0302517'] 2021-10-25 09:33:46.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267327: ['FBtr0080270'] 2021-10-25 09:33:46.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267327 has a single transcript. 2021-10-25 09:33:46.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16731577, 16731642), (16731868, 16731942)] 2021-10-25 09:33:46.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267330: ['FBtr0080021', 'FBtr0080022', 'FBtr0080023'] 2021-10-25 09:33:46.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18292578, 18292636)] 2021-10-25 09:33:46.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027570: ['FBtr0078891', 'FBtr0305133', 'FBtr0333922'] 2021-10-25 09:33:46.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10741186, 10741243), (10741447, 10741580), (10741849, 10741910), (10742073, 10754908), (10756402, 10756529), (10757544, 10759862), (10759915, 10782319), (10759915, 10794124), (10794484, 10798339)] 2021-10-25 09:33:46.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11115415, 11115483), (11115418, 11115483), (11115580, 11115716), (11115812, 11115889), (11116074, 11116140), (11116358, 11116427), (11116361, 11116427), (11116503, 11116665), (11116525, 11116669), (11117169, 11117304), (11118065, 11118414), (11118065, 11119164), (11118065, 11120609), (11118065, 11120281)] 2021-10-25 09:33:46.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2589506, 2595725), (2592348, 2595725), (2593931, 2595725), (2597015, 2597326)] 2021-10-25 09:33:46.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032597: ['FBtr0080891'] 2021-10-25 09:33:46.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032597 has a single transcript. 2021-10-25 09:33:46.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032598: ['FBtr0080892'] 2021-10-25 09:33:46.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032598 has a single transcript. 2021-10-25 09:33:46.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10427003, 10427075), (10427008, 10427075)] 2021-10-25 09:33:46.415 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10426886, 10428159, 'FBtr0080022_exon_1') contains intron (10427003, 10427075) 2021-10-25 09:33:46.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080022_exon_1'] 2021-10-25 09:33:46.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261058: ['FBtr0301938', 'FBtr0336822'] 2021-10-25 09:33:46.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032600: ['FBtr0080893', 'FBtr0113041', 'FBtr0329944', 'FBtr0329945', 'FBtr0343767', 'FBtr0308802', 'FBtr0308803'] 2021-10-25 09:33:46.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4720104, 4720223), (4720410, 4720464), (4720715, 4720980), (4721390, 4722773), (4721390, 4722607), (4722640, 4722773), (4723150, 4723203), (4723380, 4723514), (4723729, 4723795), (4724301, 4731545)] 2021-10-25 09:33:46.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053145: ['FBtr0088047', 'FBtr0088048'] 2021-10-25 09:33:46.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039537: ['FBtr0085215'] 2021-10-25 09:33:46.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039537 has a single transcript. 2021-10-25 09:33:46.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039538: ['FBtr0085216'] 2021-10-25 09:33:46.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039538 has a single transcript. 2021-10-25 09:33:46.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20640982, 20641048)] 2021-10-25 09:33:46.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11981756, 11981823), (11982371, 11982435)] 2021-10-25 09:33:46.472 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11980576, 11982371, 'FBtr0088048_exon_2') contains intron (11981756, 11981823) 2021-10-25 09:33:46.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088048_exon_2'] 2021-10-25 09:33:46.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001491: ['FBtr0073460'] 2021-10-25 09:33:46.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001491 has a single transcript. 2021-10-25 09:33:46.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039543: ['FBtr0085239', 'FBtr0085240', 'FBtr0085238', 'FBtr0085236', 'FBtr0452076', 'FBtr0452077'] 2021-10-25 09:33:46.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001565: ['FBtr0077221', 'FBtr0343853'] 2021-10-25 09:33:46.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261059: ['FBtr0301939', 'FBtr0333971'] 2021-10-25 09:33:46.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267336: ['FBtr0114582', 'FBtr0112577', 'FBtr0305157', 'FBtr0114583', 'FBtr0112576', 'FBtr0114581', 'FBtr0333685', 'FBtr0333686'] 2021-10-25 09:33:46.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053147: ['FBtr0086608', 'FBtr0345672'] 2021-10-25 09:33:46.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027572: ['FBtr0089548'] 2021-10-25 09:33:46.532 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027572 has a single transcript. 2021-10-25 09:33:46.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21386291, 21386349), (21386778, 21386973), (21387725, 21387785)] 2021-10-25 09:33:46.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027574: ['FBtr0085106', 'FBtr0339262'] 2021-10-25 09:33:46.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21683602, 21683664), (21683725, 21683776), (21683964, 21684018)] 2021-10-25 09:33:46.565 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21683664, 21683964, 'FBtr0333971_exon_1') contains intron (21683725, 21683776) 2021-10-25 09:33:46.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333971_exon_1'] 2021-10-25 09:33:46.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.572 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18718556, 18718711), (18718994, 18732554), (18732584, 18745265), (18746236, 18748050), (18748462, 18748725), (18748941, 18750802), (18751254, 18751638), (18751832, 18751952)] 2021-10-25 09:33:46.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16743564, 16743759), (16743570, 16743759), (16744067, 16744123), (16744385, 16744689), (16745107, 16746226), (16746616, 16749055), (16749188, 16749290), (16749188, 16749266)] 2021-10-25 09:33:46.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27112690, 27112830), (27112690, 27112836), (27114211, 27114273), (27114486, 27114543)] 2021-10-25 09:33:46.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.589 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001612: ['FBtr0073841'] 2021-10-25 09:33:46.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001612 has a single transcript. 2021-10-25 09:33:46.602 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329945': ['FBtr0308803']} 2021-10-25 09:33:46.602 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0308803']] 2021-10-25 09:33:46.616 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27703856, 27703912), (27704329, 27704389), (27704520, 27704589), (27705387, 27705463), (27705851, 27706064), (27705851, 27706259), (27705851, 27706554), (27705904, 27706259), (27706501, 27706554)] 2021-10-25 09:33:46.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.617 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261060: ['FBtr0301940'] 2021-10-25 09:33:46.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261060 has a single transcript. 2021-10-25 09:33:46.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261061: ['FBtr0301941'] 2021-10-25 09:33:46.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261061 has a single transcript. 2021-10-25 09:33:46.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053155: ['FBtr0100451', 'FBtr0100452', 'FBtr0100453'] 2021-10-25 09:33:46.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261064: ['FBtr0079581'] 2021-10-25 09:33:46.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261064 has a single transcript. 2021-10-25 09:33:46.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261065: ['FBtr0083690'] 2021-10-25 09:33:46.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261065 has a single transcript. 2021-10-25 09:33:46.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027575: ['FBtr0084167', 'FBtr0084168', 'FBtr0339154'] 2021-10-25 09:33:46.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001624: ['FBtr0073483', 'FBtr0073489', 'FBtr0073490', 'FBtr0073488', 'FBtr0073492', 'FBtr0073487', 'FBtr0073485', 'FBtr0073486', 'FBtr0073484', 'FBtr0073491', 'FBtr0112812', 'FBtr0112813', 'FBtr0301288', 'FBtr0301289', 'FBtr0330390', 'FBtr0302114', 'FBtr0308088', 'FBtr0308089', 'FBtr0333261', 'FBtr0333262', 'FBtr0333263'] 2021-10-25 09:33:46.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261067: ['FBtr0071628'] 2021-10-25 09:33:46.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261067 has a single transcript. 2021-10-25 09:33:46.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261068: ['FBtr0080934', 'FBtr0343770', 'FBtr0308804'] 2021-10-25 09:33:46.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036135: ['FBtr0076211'] 2021-10-25 09:33:46.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036135 has a single transcript. 2021-10-25 09:33:46.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13954445, 13954916), (13954644, 13954916), (13954861, 13954916), (13955044, 13955214)] 2021-10-25 09:33:46.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036136: ['FBtr0076223'] 2021-10-25 09:33:46.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036136 has a single transcript. 2021-10-25 09:33:46.706 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9876223, 9930363), (9929726, 9930363), (9930545, 9943480), (9943587, 9943676), (9943894, 9953772), (9943894, 9982278), (9982370, 9986647), (9986833, 9986896)] 2021-10-25 09:33:46.707 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9943480, 9945173, 'FBtr0114581_exon_3') contains intron (9943587, 9943676) 2021-10-25 09:33:46.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114581_exon_3'] 2021-10-25 09:33:46.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036138: ['FBtr0302875'] 2021-10-25 09:33:46.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036138 has a single transcript. 2021-10-25 09:33:46.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21771148, 21771209), (21771676, 21771733), (21771836, 21771901), (21771839, 21771901), (21772247, 21772659), (21772247, 21772671), (21772896, 21772962), (21773073, 21773135), (21773499, 21773559), (21773855, 21773910), (21774129, 21774184), (21774365, 21774426), (21774908, 21775084), (21775347, 21775740)] 2021-10-25 09:33:46.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036139: ['FBtr0076221'] 2021-10-25 09:33:46.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036139 has a single transcript. 2021-10-25 09:33:46.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036141: ['FBtr0076218', 'FBtr0076219'] 2021-10-25 09:33:46.732 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0112576': ['FBtr0333685']} 2021-10-25 09:33:46.732 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0333685']] 2021-10-25 09:33:46.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16742442, 16742625), (16742986, 16743045)] 2021-10-25 09:33:46.733 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16742336, 16742986, 'FBtr0080934_exon_2') contains intron (16742442, 16742625) 2021-10-25 09:33:46.733 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080934_exon_2'] 2021-10-25 09:33:46.733 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11167608, 11167818), (11167608, 11168136), (11167914, 11168136)] 2021-10-25 09:33:46.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053156: ['FBtr0087681', 'FBtr0087682', 'FBtr0087683', 'FBtr0087684', 'FBtr0113450'] 2021-10-25 09:33:46.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027578: ['FBtr0336460'] 2021-10-25 09:33:46.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027578 has a single transcript. 2021-10-25 09:33:46.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032601: ['FBtr0080894', 'FBtr0343768'] 2021-10-25 09:33:46.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027579: ['FBtr0085249', 'FBtr0085250', 'FBtr0085251', 'FBtr0335011'] 2021-10-25 09:33:46.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036142: ['FBtr0076161', 'FBtr0331829'] 2021-10-25 09:33:46.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261085: ['FBtr0331598', 'FBtr0073767'] 2021-10-25 09:33:46.851 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16754398, 16755682), (16754578, 16755682), (16755963, 16756968)] 2021-10-25 09:33:46.851 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039544: ['FBtr0100446'] 2021-10-25 09:33:46.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039544 has a single transcript. 2021-10-25 09:33:46.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11170149, 11170209), (11171046, 11171129), (11171295, 11171361), (11171708, 11171774)] 2021-10-25 09:33:46.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13359437, 13363240), (13359437, 13363243), (13363480, 13363583), (13364872, 13364930), (13365075, 13365139), (13365493, 13365574)] 2021-10-25 09:33:46.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039551: ['FBtr0085226'] 2021-10-25 09:33:46.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039551 has a single transcript. 2021-10-25 09:33:46.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039552: ['FBtr0300050'] 2021-10-25 09:33:46.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039552 has a single transcript. 2021-10-25 09:33:46.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039554: ['FBtr0085272'] 2021-10-25 09:33:46.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039554 has a single transcript. 2021-10-25 09:33:46.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039555: ['FBtr0085247'] 2021-10-25 09:33:46.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039555 has a single transcript. 2021-10-25 09:33:46.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032602: ['FBtr0080933', 'FBtr0343769'] 2021-10-25 09:33:46.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13548894, 13548953), (13549536, 13549598), (13549916, 13550672), (13549916, 13551951), (13549916, 13549986), (13549916, 13552107), (13549916, 13552997)] 2021-10-25 09:33:46.911 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27925993, 27929230), (27929348, 27929980), (27929791, 27929980), (27929896, 27929980), (27930145, 27930203), (27931198, 27931319), (27931624, 27931687), (27932025, 27932089), (27932399, 27932461)] 2021-10-25 09:33:46.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039557: ['FBtr0085270'] 2021-10-25 09:33:46.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039557 has a single transcript. 2021-10-25 09:33:46.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039558: ['FBtr0085269'] 2021-10-25 09:33:46.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039558 has a single transcript. 2021-10-25 09:33:46.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036143: ['FBtr0300347', 'FBtr0300348', 'FBtr0300349'] 2021-10-25 09:33:46.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261086: ['FBtr0078957', 'FBtr0336485', 'FBtr0339551'] 2021-10-25 09:33:46.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039559: ['FBtr0085267', 'FBtr0335014'] 2021-10-25 09:33:46.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16758508, 16758566), (16758680, 16758737), (16758888, 16758952), (16759083, 16759135), (16759284, 16759342), (16759546, 16759606), (16759760, 16759879)] 2021-10-25 09:33:46.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27933314, 27933372), (27933498, 27933562), (27935981, 27936061), (27935993, 27936061), (27937337, 27937430)] 2021-10-25 09:33:46.974 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.974 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11173631, 11173694), (11173909, 11173979), (11174148, 11174545), (11174611, 11174685), (11174756, 11174871), (11175025, 11175087), (11175159, 11175295)] 2021-10-25 09:33:46.988 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11174545, 11175025, 'FBtr0300348_exon_4') contains intron (11174611, 11174685) 2021-10-25 09:33:46.988 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11174685, 11175025, 'FBtr0300349_exon_5') contains intron (11174756, 11174871) 2021-10-25 09:33:46.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300348_exon_4', 'FBtr0300349_exon_5'] 2021-10-25 09:33:46.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:46.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4317106, 4317653), (4317889, 4317955), (4318288, 4318347), (4318509, 4318581)] 2021-10-25 09:33:46.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:46.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267337: ['FBtr0299637', 'FBtr0299639', 'FBtr0300518', 'FBtr0330140'] 2021-10-25 09:33:46.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.004 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0078957': ['FBtr0339551']} 2021-10-25 09:33:47.004 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0339551']] 2021-10-25 09:33:47.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032603: ['FBtr0080908', 'FBtr0331619'] 2021-10-25 09:33:47.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039560: ['FBtr0085252', 'FBtr0085253', 'FBtr0301143', 'FBtr0335012', 'FBtr0335013'] 2021-10-25 09:33:47.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16791707, 16791763), (16791869, 16791942), (16792273, 16792369), (16792752, 16792809)] 2021-10-25 09:33:47.049 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16791567, 16791869, 'FBtr0080908_exon_1') contains intron (16791707, 16791763) 2021-10-25 09:33:47.049 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080908_exon_1'] 2021-10-25 09:33:47.050 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261089: ['FBtr0340251', 'FBtr0080987', 'FBtr0303254', 'FBtr0303255'] 2021-10-25 09:33:47.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027580: ['FBtr0088462', 'FBtr0088454', 'FBtr0088455', 'FBtr0088456', 'FBtr0088457', 'FBtr0088458', 'FBtr0088459', 'FBtr0088460', 'FBtr0088461', 'FBtr0300850'] 2021-10-25 09:33:47.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7274358, 7274994), (7276033, 7291863), (7276033, 7276695), (7292144, 7292387), (7292438, 7294411), (7294451, 7295703), (7295805, 7300636), (7301176, 7307856), (7301176, 7301758), (7308475, 7309029)] 2021-10-25 09:33:47.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053158: ['FBtr0075390'] 2021-10-25 09:33:47.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053158 has a single transcript. 2021-10-25 09:33:47.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053159: ['FBtr0073104'] 2021-10-25 09:33:47.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053159 has a single transcript. 2021-10-25 09:33:47.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036144: ['FBtr0076189', 'FBtr0100422', 'FBtr0076190', 'FBtr0306254', 'FBtr0306255'] 2021-10-25 09:33:47.094 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0300518': ['FBtr0330140']} 2021-10-25 09:33:47.095 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330140']] 2021-10-25 09:33:47.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053160: ['FBtr0073102'] 2021-10-25 09:33:47.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053160 has a single transcript. 2021-10-25 09:33:47.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053169: ['FBtr0078549', 'FBtr0299876'] 2021-10-25 09:33:47.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032609: ['FBtr0080931', 'FBtr0331625'] 2021-10-25 09:33:47.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11369799, 11373816), (11369799, 11374256), (11369799, 11374268), (11373142, 11373816), (11374088, 11374256), (11374510, 11376841), (11376718, 11376841), (11376973, 11381855), (11381980, 11387771), (11381980, 11382935), (11383112, 11387771), (11384973, 11387110), (11387512, 11387771), (11387933, 11394222), (11387933, 11387985), (11387933, 11387991), (11387933, 11388015), (11387933, 11395239), (11389697, 11390230), (11389781, 11390230), (11389781, 11390175), (11390540, 11395239), (11390540, 11394222), (11394246, 11395239), (11395791, 11395853), (11396103, 11400787), (11396103, 11397824), (11396571, 11397824), (11397912, 11397969), (11398183, 11398245), (11398659, 11398719), (11398822, 11405273), (11398822, 11399741), (11398822, 11400787), (11399816, 11400787), (11399816, 11405273), (11400832, 11405273), (11400832, 11402706), (11402787, 11405273), (11405423, 11405559), (11405842, 11405903), (11405995, 11406071)] 2021-10-25 09:33:47.122 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11373816, 11374510, 'FBtr0073483_exon_2') contains intron (11374088, 11374256) 2021-10-25 09:33:47.123 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11373816, 11374510, 'FBtr0073490_exon_2') contains intron (11374088, 11374256) 2021-10-25 09:33:47.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11373816, 11374510, 'FBtr0073488_exon_2') contains intron (11374088, 11374256) 2021-10-25 09:33:47.126 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11373816, 11374510, 'FBtr0112813_exon_2') contains intron (11374088, 11374256) 2021-10-25 09:33:47.130 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11373816, 11374510, 'FBtr0333263_exon_2') contains intron (11374088, 11374256) 2021-10-25 09:33:47.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073483_exon_2', 'FBtr0073490_exon_2', 'FBtr0073488_exon_2', 'FBtr0112813_exon_2', 'FBtr0333263_exon_2'] 2021-10-25 09:33:47.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27938381, 27938443), (27938918, 27938976), (27939647, 27939706), (27942133, 27942587), (27942133, 27942434), (27942133, 27942584), (27942483, 27942587)] 2021-10-25 09:33:47.142 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27942434, 27942778, 'FBtr0301143_exon_4') contains intron (27942483, 27942587) 2021-10-25 09:33:47.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301143_exon_4'] 2021-10-25 09:33:47.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17592333, 17600940), (17593043, 17600940), (17594996, 17600940), (17601148, 17601452), (17601843, 17601911), (17602146, 17602205), (17602703, 17603115)] 2021-10-25 09:33:47.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:47.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16802566, 16802619), (16802866, 16802923), (16803203, 16803270), (16803675, 16803956), (16803675, 16820942)] 2021-10-25 09:33:47.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11178531, 11178647), (11178938, 11179223), (11179381, 11179529), (11179716, 11183633), (11179716, 11182154), (11182643, 11183633), (11184208, 11184388), (11184419, 11196566), (11196875, 11197500), (11196875, 11197238), (11196875, 11197399), (11196875, 11197504)] 2021-10-25 09:33:47.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267339: ['FBtr0084582'] 2021-10-25 09:33:47.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267339 has a single transcript. 2021-10-25 09:33:47.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.197 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073485': ['FBtr0330390']} 2021-10-25 09:33:47.197 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330390']] 2021-10-25 09:33:47.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267347: ['FBtr0080887', 'FBtr0305565', 'FBtr0335140'] 2021-10-25 09:33:47.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053170: ['FBtr0089836', 'FBtr0299877', 'FBtr0337041'] 2021-10-25 09:33:47.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032612: ['FBtr0080929', 'FBtr0331624'] 2021-10-25 09:33:47.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16832806, 16832864), (16833296, 16833436), (16833808, 16833863), (16834013, 16834354)] 2021-10-25 09:33:47.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16680276, 16680705), (16680276, 16680449), (16680650, 16680705)] 2021-10-25 09:33:47.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9851385, 9851453), (9852483, 9852547), (9853205, 9853682), (9853205, 9854510), (9853730, 9854510), (9856020, 9856083), (9856210, 9861450), (9856210, 9856275), (9856210, 9860369), (9860452, 9860574), (9860452, 9860524)] 2021-10-25 09:33:47.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9856083, 9856410, 'FBtr0088462_exon_1') contains intron (9856210, 9856275) 2021-10-25 09:33:47.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9860369, 9860759, 'FBtr0088457_exon_1') contains intron (9860452, 9860574) 2021-10-25 09:33:47.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9860369, 9860759, 'FBtr0088458_exon_1') contains intron (9860452, 9860574) 2021-10-25 09:33:47.285 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9856083, 9856410, 'FBtr0088461_exon_1') contains intron (9856210, 9856275) 2021-10-25 09:33:47.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22864925, 22865770), (22865696, 22865770), (22865824, 22865877), (22865960, 22867399), (22866034, 22867115)] 2021-10-25 09:33:47.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088462_exon_1', 'FBtr0088457_exon_1', 'FBtr0088458_exon_1', 'FBtr0088461_exon_1'] 2021-10-25 09:33:47.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261090: ['FBtr0299848', 'FBtr0299849'] 2021-10-25 09:33:47.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039561: ['FBtr0085266'] 2021-10-25 09:33:47.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039561 has a single transcript. 2021-10-25 09:33:47.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032613: ['FBtr0080928'] 2021-10-25 09:33:47.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032613 has a single transcript. 2021-10-25 09:33:47.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039562: ['FBtr0085254'] 2021-10-25 09:33:47.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039562 has a single transcript. 2021-10-25 09:33:47.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039563: ['FBtr0085265', 'FBtr0113298'] 2021-10-25 09:33:47.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032614: ['FBtr0080926', 'FBtr0080927', 'FBtr0345747', 'FBtr0332333', 'FBtr0332334'] 2021-10-25 09:33:47.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15016617, 15016824), (15016965, 15017062), (15017212, 15017269), (15017550, 15018130), (15018620, 15018689), (15018947, 15048731), (15018947, 15019014), (15019407, 15033880), (15048926, 15064561)] 2021-10-25 09:33:47.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267348: ['FBtr0076382', 'FBtr0345031'] 2021-10-25 09:33:47.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053172: ['FBtr0308092'] 2021-10-25 09:33:47.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053172 has a single transcript. 2021-10-25 09:33:47.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27952414, 27952474), (27952682, 27952756), (27952924, 27952992), (27953085, 27953143), (27953341, 27953497), (27953946, 27954001)] 2021-10-25 09:33:47.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036145: ['FBtr0076163'] 2021-10-25 09:33:47.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036145 has a single transcript. 2021-10-25 09:33:47.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053177: ['FBtr0073962'] 2021-10-25 09:33:47.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053177 has a single transcript. 2021-10-25 09:33:47.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036146: ['FBtr0076164'] 2021-10-25 09:33:47.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036146 has a single transcript. 2021-10-25 09:33:47.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053178: ['FBtr0073963', 'FBtr0340426', 'FBtr0346085'] 2021-10-25 09:33:47.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036147: ['FBtr0076187', 'FBtr0076188'] 2021-10-25 09:33:47.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261108: ['FBtr0081843'] 2021-10-25 09:33:47.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261108 has a single transcript. 2021-10-25 09:33:47.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261109: ['FBtr0075595'] 2021-10-25 09:33:47.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261109 has a single transcript. 2021-10-25 09:33:47.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9614972, 9617053), (9616113, 9617053), (9617441, 9617778), (9617912, 9617975), (9618103, 9618169), (9618784, 9619300), (9619712, 9619778), (9622364, 9622422), (9622759, 9622816), (9623117, 9623178)] 2021-10-25 09:33:47.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261111: ['FBtr0076834'] 2021-10-25 09:33:47.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261111 has a single transcript. 2021-10-25 09:33:47.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261112: ['FBtr0331179', 'FBtr0076208'] 2021-10-25 09:33:47.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039564: ['FBtr0085255'] 2021-10-25 09:33:47.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039564 has a single transcript. 2021-10-25 09:33:47.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11198710, 11198769), (11199204, 11199265), (11199392, 11202214), (11202340, 11202399), (11202501, 11202621), (11202875, 11202942), (11203474, 11203532), (11203672, 11204904), (11204990, 11205733), (11205869, 11205955)] 2021-10-25 09:33:47.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11205733, 11206016, 'FBtr0076187_exon_1') contains intron (11205869, 11205955) 2021-10-25 09:33:47.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076187_exon_1'] 2021-10-25 09:33:47.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039565: ['FBtr0085264', 'FBtr0344620'] 2021-10-25 09:33:47.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16843394, 16843512), (16843961, 16844508), (16844619, 16844678), (16844801, 16846750), (16846964, 16848599), (16846964, 16847502), (16847731, 16847816), (16848063, 16848599)] 2021-10-25 09:33:47.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15083041, 15083120), (15083041, 15083256), (15083156, 15083256), (15083336, 15083487)] 2021-10-25 09:33:47.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11098752, 11098809), (11098974, 11099030), (11099676, 11099742), (11100076, 11100138), (11100387, 11100446)] 2021-10-25 09:33:47.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27957619, 27957671), (27957744, 27957806), (27959019, 27959077)] 2021-10-25 09:33:47.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267350: ['FBtr0307158', 'FBtr0331587'] 2021-10-25 09:33:47.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036150: ['FBtr0076185', 'FBtr0345037'] 2021-10-25 09:33:47.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2625113, 2625571), (2625785, 2625863), (2626925, 2627423), (2626925, 2627862), (2627483, 2627862), (2628364, 2628422), (2629409, 2629475), (2631280, 2631364), (2632281, 2632343), (2632532, 2632604), (2632851, 2632911)] 2021-10-25 09:33:47.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039566: ['FBtr0085257'] 2021-10-25 09:33:47.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039566 has a single transcript. 2021-10-25 09:33:47.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261113: ['FBtr0083700', 'FBtr0083701', 'FBtr0083702', 'FBtr0083703', 'FBtr0113246', 'FBtr0334523', 'FBtr0334524'] 2021-10-25 09:33:47.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039568: ['FBtr0085260'] 2021-10-25 09:33:47.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039568 has a single transcript. 2021-10-25 09:33:47.556 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11233273, 11233333), (11233273, 11233336), (11233535, 11233967), (11234121, 11234183), (11234758, 11234847), (11235116, 11235213), (11235347, 11235411)] 2021-10-25 09:33:47.557 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039576: ['FBtr0085279'] 2021-10-25 09:33:47.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039576 has a single transcript. 2021-10-25 09:33:47.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053179: ['FBtr0273450', 'FBtr0329973'] 2021-10-25 09:33:47.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039577: ['FBtr0301672'] 2021-10-25 09:33:47.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039577 has a single transcript. 2021-10-25 09:33:47.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039580: ['FBtr0085297'] 2021-10-25 09:33:47.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039580 has a single transcript. 2021-10-25 09:33:47.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039581: ['FBtr0085286', 'FBtr0085287', 'FBtr0300346'] 2021-10-25 09:33:47.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267351: ['FBtr0086570', 'FBtr0331977'] 2021-10-25 09:33:47.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16973697, 16976489), (16977050, 16984609), (16984818, 16986014), (16986150, 16990240), (16990503, 16991980), (16992125, 16992656)] 2021-10-25 09:33:47.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036152: ['FBtr0076183', 'FBtr0333388', 'FBtr0333389'] 2021-10-25 09:33:47.621 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0273450': ['FBtr0329973']} 2021-10-25 09:33:47.621 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329973']] 2021-10-25 09:33:47.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032615: ['FBtr0080923'] 2021-10-25 09:33:47.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032615 has a single transcript. 2021-10-25 09:33:47.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053180: ['FBtr0074162', 'FBtr0340311', 'FBtr0303645', 'FBtr0303646', 'FBtr0303647', 'FBtr0303648'] 2021-10-25 09:33:47.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032618: ['FBtr0080947', 'FBtr0340171'] 2021-10-25 09:33:47.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18972938, 18972997), (18973722, 18973782), (18974243, 18974310), (18975725, 18975892)] 2021-10-25 09:33:47.647 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18972926, 18973722, 'FBtr0086570_exon_1') contains intron (18972938, 18972997) 2021-10-25 09:33:47.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086570_exon_1'] 2021-10-25 09:33:47.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28340738, 28341371), (28341459, 28341626), (28341459, 28342184), (28342214, 28342279), (28342419, 28342478), (28342626, 28342682), (28342809, 28342879), (28343074, 28343134)] 2021-10-25 09:33:47.658 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28341371, 28342214, 'FBtr0300346_exon_2') contains intron (28341459, 28341626) 2021-10-25 09:33:47.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300346_exon_2'] 2021-10-25 09:33:47.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16879920, 16880588), (16880660, 16881034), (16881801, 16885263), (16885735, 16885795)] 2021-10-25 09:33:47.687 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11289654, 11291037), (11291109, 11293787), (11291109, 11291335), (11291368, 11293787)] 2021-10-25 09:33:47.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18915925, 18919422), (18918625, 18925077), (18918625, 18919422), (18919512, 18925077), (18919512, 18920412), (18921319, 18925077), (18924145, 18925077), (18925796, 18925904)] 2021-10-25 09:33:47.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267363: ['FBtr0346692'] 2021-10-25 09:33:47.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267363 has a single transcript. 2021-10-25 09:33:47.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267365: ['FBtr0080062'] 2021-10-25 09:33:47.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267365 has a single transcript. 2021-10-25 09:33:47.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027581: ['FBtr0087678', 'FBtr0330617', 'FBtr0330618'] 2021-10-25 09:33:47.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267366: ['FBtr0085246'] 2021-10-25 09:33:47.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267366 has a single transcript. 2021-10-25 09:33:47.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267376: ['FBtr0082291', 'FBtr0082292', 'FBtr0082294', 'FBtr0082295', 'FBtr0273345', 'FBtr0273346', 'FBtr0273347', 'FBtr0306641'] 2021-10-25 09:33:47.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032620: ['FBtr0080957'] 2021-10-25 09:33:47.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032620 has a single transcript. 2021-10-25 09:33:47.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032624: ['FBtr0080955', 'FBtr0346585'] 2021-10-25 09:33:47.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039582: ['FBtr0347602'] 2021-10-25 09:33:47.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039582 has a single transcript. 2021-10-25 09:33:47.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15927836, 15929340), (15928930, 15929340), (15928930, 15929172), (15929084, 15929172), (15929258, 15929340), (15929402, 15929471), (15929591, 15929657), (15929797, 15929853), (15929915, 15929980), (15930058, 15930116), (15930255, 15930322), (15930882, 15930941), (15931234, 15931306), (15931986, 15932043), (15932190, 15932245), (15932461, 15932521), (15932621, 15932849), (15933079, 15933142), (15933538, 15933600)] 2021-10-25 09:33:47.765 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15929172, 15929402, 'FBtr0303645_exon_15') contains intron (15929258, 15929340) 2021-10-25 09:33:47.766 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15933142, 15933675, 'FBtr0303648_exon_1') contains intron (15933538, 15933600) 2021-10-25 09:33:47.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303645_exon_15', 'FBtr0303648_exon_1'] 2021-10-25 09:33:47.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039584: ['FBtr0085289', 'FBtr0333336'] 2021-10-25 09:33:47.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13581336, 13581493), (13581678, 13581748), (13581866, 13582798), (13581866, 13582161), (13582194, 13582798), (13582947, 13583006), (13583133, 13583198), (13583582, 13590599), (13591878, 13592893)] 2021-10-25 09:33:47.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036153: ['FBtr0076171'] 2021-10-25 09:33:47.792 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036153 has a single transcript. 2021-10-25 09:33:47.795 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087678': ['FBtr0330618']} 2021-10-25 09:33:47.795 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330618']] 2021-10-25 09:33:47.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036154: ['FBtr0076182', 'FBtr0345692'] 2021-10-25 09:33:47.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17012612, 17012673), (17013099, 17014606)] 2021-10-25 09:33:47.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28418867, 28442769), (28442815, 28462006), (28462199, 28463714), (28463806, 28464078), (28464189, 28472154), (28472424, 28472646)] 2021-10-25 09:33:47.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:47.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027582: ['FBtr0080228'] 2021-10-25 09:33:47.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027582 has a single transcript. 2021-10-25 09:33:47.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032625: ['FBtr0080954', 'FBtr0332011'] 2021-10-25 09:33:47.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027583: ['FBtr0085544'] 2021-10-25 09:33:47.866 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027583 has a single transcript. 2021-10-25 09:33:47.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027584: ['FBtr0082339', 'FBtr0335216'] 2021-10-25 09:33:47.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039585: ['FBtr0085290'] 2021-10-25 09:33:47.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039585 has a single transcript. 2021-10-25 09:33:47.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17047609, 17047770), (17048065, 17048128)] 2021-10-25 09:33:47.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039588: ['FBtr0085293'] 2021-10-25 09:33:47.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039588 has a single transcript. 2021-10-25 09:33:47.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036155: ['FBtr0076181', 'FBtr0333387'] 2021-10-25 09:33:47.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039589: ['FBtr0085304'] 2021-10-25 09:33:47.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039589 has a single transcript. 2021-10-25 09:33:47.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039590: ['FBtr0085319'] 2021-10-25 09:33:47.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039590 has a single transcript. 2021-10-25 09:33:47.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11162243, 11162313), (11162643, 11162711), (11162844, 11162900)] 2021-10-25 09:33:47.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039591: ['FBtr0085305'] 2021-10-25 09:33:47.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039591 has a single transcript. 2021-10-25 09:33:47.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10863825, 10866528), (10863858, 10866528), (10865626, 10866528), (10865647, 10866528), (10866693, 10866808), (10866960, 10868438), (10866976, 10868438), (10866976, 10867971)] 2021-10-25 09:33:47.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039592: ['FBtr0100373'] 2021-10-25 09:33:47.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039592 has a single transcript. 2021-10-25 09:33:47.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11363086, 11363276), (11363918, 11364608)] 2021-10-25 09:33:47.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039593: ['FBtr0085307'] 2021-10-25 09:33:47.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:47.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039593 has a single transcript. 2021-10-25 09:33:47.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032626: ['FBtr0080953', 'FBtr0332225'] 2021-10-25 09:33:47.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039594: ['FBtr0085308', 'FBtr0085309', 'FBtr0303343', 'FBtr0305087', 'FBtr0305088', 'FBtr0336787'] 2021-10-25 09:33:47.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027585: ['FBtr0088711', 'FBtr0088712', 'FBtr0088713', 'FBtr0290115', 'FBtr0339338'] 2021-10-25 09:33:47.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261119: ['FBtr0086723'] 2021-10-25 09:33:47.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261119 has a single transcript. 2021-10-25 09:33:47.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:47.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:47.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001941: ['FBtr0079179', 'FBtr0332599'] 2021-10-25 09:33:48.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036156: ['FBtr0076172'] 2021-10-25 09:33:48.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036156 has a single transcript. 2021-10-25 09:33:48.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261238: ['FBtr0330367', 'FBtr0081612', 'FBtr0081613', 'FBtr0081614', 'FBtr0113200', 'FBtr0300494', 'FBtr0300495', 'FBtr0334672', 'FBtr0334673', 'FBtr0334674', 'FBtr0334675', 'FBtr0334676', 'FBtr0334677'] 2021-10-25 09:33:48.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036157: ['FBtr0076173'] 2021-10-25 09:33:48.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036157 has a single transcript. 2021-10-25 09:33:48.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036158: ['FBtr0300274'] 2021-10-25 09:33:48.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036158 has a single transcript. 2021-10-25 09:33:48.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053181: ['FBtr0113451', 'FBtr0113452', 'FBtr0113453', 'FBtr0113454', 'FBtr0113455', 'FBtr0339824', 'FBtr0333144', 'FBtr0333145'] 2021-10-25 09:33:48.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036159: ['FBtr0076174', 'FBtr0076175'] 2021-10-25 09:33:48.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5986892, 5987615), (5987494, 5987615)] 2021-10-25 09:33:48.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032629: ['FBtr0080971', 'FBtr0080972'] 2021-10-25 09:33:48.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11445511, 11445568), (11445676, 11445739)] 2021-10-25 09:33:48.094 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11445160, 11445676, 'FBtr0076174_exon_1') contains intron (11445511, 11445568) 2021-10-25 09:33:48.095 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076174_exon_1'] 2021-10-25 09:33:48.095 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8736408, 8748109), (8736408, 8745820), (8736408, 8752408), (8746109, 8752408), (8746145, 8752408), (8748124, 8752408), (8749128, 8752408), (8754251, 8754356), (8754933, 8757335), (8757521, 8757578), (8757736, 8757798), (8758248, 8758313), (8758614, 8759111)] 2021-10-25 09:33:48.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28675685, 28690210), (28682590, 28686241), (28682590, 28690210), (28686451, 28690210), (28689714, 28690210), (28690417, 28692243), (28692760, 28692821), (28692970, 28693171), (28692970, 28693135), (28693277, 28693339), (28693621, 28693953), (28693627, 28693953), (28694402, 28694465), (28694526, 28694592), (28694924, 28694983)] 2021-10-25 09:33:48.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001942: ['FBtr0079175', 'FBtr0079176', 'FBtr0079177', 'FBtr0079178', 'FBtr0307068', 'FBtr0331201'] 2021-10-25 09:33:48.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17190230, 17190296), (17190432, 17190833), (17191099, 17193524), (17193660, 17196874), (17197086, 17251508), (17251615, 17260349)] 2021-10-25 09:33:48.115 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17189829, 17190432, 'FBtr0080971_exon_6') contains intron (17190230, 17190296) 2021-10-25 09:33:48.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080971_exon_6'] 2021-10-25 09:33:48.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036160: ['FBtr0076178'] 2021-10-25 09:33:48.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036160 has a single transcript. 2021-10-25 09:33:48.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036161: ['FBtr0076176'] 2021-10-25 09:33:48.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036161 has a single transcript. 2021-10-25 09:33:48.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032631: ['FBtr0302408'] 2021-10-25 09:33:48.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032631 has a single transcript. 2021-10-25 09:33:48.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036162: ['FBtr0076177', 'FBtr0331828'] 2021-10-25 09:33:48.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032632: ['FBtr0080970', 'FBtr0339800'] 2021-10-25 09:33:48.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11464027, 11464082), (11465091, 11465163), (11465308, 11465670)] 2021-10-25 09:33:48.227 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.227 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:48.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8489637, 8509455), (8490015, 8491947), (8490015, 8509455), (8491436, 8491947), (8492030, 8509455), (8492030, 8512352), (8502774, 8509455), (8509466, 8510569), (8510118, 8510224), (8510704, 8511089), (8510704, 8512352), (8510704, 8512430), (8511400, 8512352), (8512750, 8513910), (8514235, 8514306), (8514453, 8514523), (8514671, 8515188), (8515394, 8515463), (8515612, 8515722)] 2021-10-25 09:33:48.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.234 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8509676, 8510704, 'FBtr0113452_exon_1') contains intron (8510118, 8510224) 2021-10-25 09:33:48.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113452_exon_1'] 2021-10-25 09:33:48.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5981835, 5983009), (5982821, 5983009), (5983236, 5984010), (5984624, 5984718), (5984942, 5985025), (5985220, 5985338), (5985220, 5985342)] 2021-10-25 09:33:48.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5985025, 5985579, 'FBtr0079175_exon_5') contains intron (5985220, 5985338) 2021-10-25 09:33:48.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5985025, 5985579, 'FBtr0079177_exon_5') contains intron (5985220, 5985338) 2021-10-25 09:33:48.251 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5985025, 5985909, 'FBtr0307068_exon_5') contains intron (5985220, 5985338) 2021-10-25 09:33:48.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079175_exon_5', 'FBtr0079177_exon_5', 'FBtr0307068_exon_5'] 2021-10-25 09:33:48.251 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036165: ['FBtr0076093', 'FBtr0344910'] 2021-10-25 09:33:48.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032633: ['FBtr0080968', 'FBtr0080969', 'FBtr0339797'] 2021-10-25 09:33:48.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267378: ['FBtr0100673', 'FBtr0077840', 'FBtr0100674'] 2021-10-25 09:33:48.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027586: ['FBtr0080449'] 2021-10-25 09:33:48.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027586 has a single transcript. 2021-10-25 09:33:48.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7095515, 7095579), (7095843, 7096515), (7095843, 7096291), (7095843, 7096384), (7096820, 7096886), (7097250, 7098318), (7097346, 7098318), (7098483, 7098554), (7098732, 7098825), (7099522, 7101136), (7100545, 7101136), (7101497, 7101598), (7102097, 7107077), (7102097, 7118957), (7119048, 7119434), (7119048, 7119461), (7120882, 7120941), (7121138, 7121274), (7121753, 7123903), (7121753, 7123639)] 2021-10-25 09:33:48.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.320 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027587: ['FBtr0072528', 'FBtr0344840', 'FBtr0344841', 'FBtr0344842', 'FBtr0331407'] 2021-10-25 09:33:48.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11488601, 11494089), (11493985, 11494089), (11494732, 11494845), (11494956, 11495016)] 2021-10-25 09:33:48.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039595: ['FBtr0085316', 'FBtr0308641', 'FBtr0336790'] 2021-10-25 09:33:48.364 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330367': ['FBtr0300494']} 2021-10-25 09:33:48.364 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0300494']] 2021-10-25 09:33:48.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2227281, 2229265), (2229393, 2229456), (2229575, 2229637), (2229813, 2229877)] 2021-10-25 09:33:48.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17368388, 17370842), (17368388, 17372564), (17371820, 17372564), (17372642, 17372707), (17372845, 17372904), (17373517, 17373578), (17374156, 17374230), (17374748, 17383469)] 2021-10-25 09:33:48.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036168: ['FBtr0113163'] 2021-10-25 09:33:48.389 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036168 has a single transcript. 2021-10-25 09:33:48.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036170: ['FBtr0076156', 'FBtr0339510', 'FBtr0346859'] 2021-10-25 09:33:48.426 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28737646, 28738589), (28737646, 28740471), (28738672, 28740471), (28740630, 28740705), (28740984, 28743485)] 2021-10-25 09:33:48.427 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(207276, 208089), (208317, 208371), (208908, 208970), (209079, 209141), (209374, 209434), (209374, 209449), (209710, 209783), (209713, 209783), (210738, 210814), (211219, 211291)] 2021-10-25 09:33:48.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11519014, 11519078), (11519494, 11519557), (11520034, 11520105), (11520212, 11520293), (11520435, 11520508), (11522470, 11522557), (11522506, 11522557)] 2021-10-25 09:33:48.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267383: ['FBtr0082838'] 2021-10-25 09:33:48.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267383 has a single transcript. 2021-10-25 09:33:48.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032634: ['FBtr0081011'] 2021-10-25 09:33:48.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032634 has a single transcript. 2021-10-25 09:33:48.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267384: ['FBtr0074283', 'FBtr0340157'] 2021-10-25 09:33:48.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032635: ['FBtr0080979'] 2021-10-25 09:33:48.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032635 has a single transcript. 2021-10-25 09:33:48.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001961: ['FBtr0080569', 'FBtr0080570'] 2021-10-25 09:33:48.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032636: ['FBtr0080980'] 2021-10-25 09:33:48.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032636 has a single transcript. 2021-10-25 09:33:48.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032637: ['FBtr0080981', 'FBtr0305682'] 2021-10-25 09:33:48.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16594043, 16594105), (16594187, 16594270), (16594530, 16594690)] 2021-10-25 09:33:48.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.523 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13829276, 13829345), (13829643, 13829709)] 2021-10-25 09:33:48.530 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13829345, 13829741, 'FBtr0080570_exon_1') contains intron (13829643, 13829709) 2021-10-25 09:33:48.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080570_exon_1'] 2021-10-25 09:33:48.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039596: ['FBtr0085315'] 2021-10-25 09:33:48.532 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039596 has a single transcript. 2021-10-25 09:33:48.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039597: ['FBtr0085314', 'FBtr0336789'] 2021-10-25 09:33:48.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17453437, 17453514), (17453724, 17453883), (17454173, 17458475)] 2021-10-25 09:33:48.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053182: ['FBtr0087770', 'FBtr0302052', 'FBtr0302053', 'FBtr0302054', 'FBtr0310498'] 2021-10-25 09:33:48.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036173: ['FBtr0076098', 'FBtr0290024', 'FBtr0333215', 'FBtr0305648'] 2021-10-25 09:33:48.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28755748, 28755919)] 2021-10-25 09:33:48.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267385: ['FBtr0084213', 'FBtr0084214'] 2021-10-25 09:33:48.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001965: ['FBtr0080541'] 2021-10-25 09:33:48.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001965 has a single transcript. 2021-10-25 09:33:48.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001967: ['FBtr0290243'] 2021-10-25 09:33:48.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001967 has a single transcript. 2021-10-25 09:33:48.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032638: ['FBtr0081004'] 2021-10-25 09:33:48.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032638 has a single transcript. 2021-10-25 09:33:48.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001970: ['FBtr0080629'] 2021-10-25 09:33:48.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001970 has a single transcript. 2021-10-25 09:33:48.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032639: ['FBtr0300902'] 2021-10-25 09:33:48.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032639 has a single transcript. 2021-10-25 09:33:48.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039598: ['FBtr0085313'] 2021-10-25 09:33:48.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039598 has a single transcript. 2021-10-25 09:33:48.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001974: ['FBtr0080696'] 2021-10-25 09:33:48.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032640: ['FBtr0080982', 'FBtr0305683'] 2021-10-25 09:33:48.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001974 has a single transcript. 2021-10-25 09:33:48.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22367668, 22370777), (22369565, 22370777), (22372167, 22372225), (22372382, 22372468)] 2021-10-25 09:33:48.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027588: ['FBtr0070058', 'FBtr0070060', 'FBtr0070062', 'FBtr0070061', 'FBtr0070059'] 2021-10-25 09:33:48.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039599: ['FBtr0085311'] 2021-10-25 09:33:48.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039599 has a single transcript. 2021-10-25 09:33:48.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001977: ['FBtr0080725'] 2021-10-25 09:33:48.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001977 has a single transcript. 2021-10-25 09:33:48.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039600: ['FBtr0085322', 'FBtr0085323', 'FBtr0085325', 'FBtr0113299', 'FBtr0113301'] 2021-10-25 09:33:48.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001978: ['FBtr0080705', 'FBtr0080706', 'FBtr0332473', 'FBtr0332474'] 2021-10-25 09:33:48.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11562085, 11562646), (11562737, 11562860), (11563100, 11563302)] 2021-10-25 09:33:48.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11562736, 11563100, 'FBtr0290024_exon_1') contains intron (11562737, 11562860) 2021-10-25 09:33:48.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290024_exon_1'] 2021-10-25 09:33:48.675 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17471852, 17473560)] 2021-10-25 09:33:48.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13179013, 13179587), (13180110, 13184776), (13185175, 13185783), (13186155, 13186272), (13186532, 13186599), (13186922, 13186980), (13187319, 13187393), (13187908, 13189087), (13187908, 13197676), (13187908, 13198212), (13187908, 13189560), (13198159, 13198212)] 2021-10-25 09:33:48.683 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.683 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.684 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267390: ['FBtr0075562', 'FBtr0332091'] 2021-10-25 09:33:48.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15566153, 15568205), (15566799, 15568205), (15568970, 15569407), (15569934, 15570006), (15570566, 15570688), (15571958, 15572022), (15572419, 15572482), (15572856, 15572928), (15574086, 15574155), (15574471, 15574535), (15575489, 15575553)] 2021-10-25 09:33:48.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032642: ['FBtr0080983', 'FBtr0306162'] 2021-10-25 09:33:48.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15114213, 15114311), (15114213, 15114299), (15114234, 15114299), (15114234, 15114311), (15115753, 15115999), (15117067, 15117139), (15117491, 15117553)] 2021-10-25 09:33:48.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21601274, 21601343), (21602829, 21602980), (21603730, 21604462), (21604592, 21604713), (21604592, 21605077), (21604592, 21605151), (21604592, 21605173)] 2021-10-25 09:33:48.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28812154, 28812394), (28812154, 28812236), (28812154, 28812226), (28812486, 28812704), (28813551, 28813617), (28813814, 28813880), (28814006, 28815147), (28815422, 28815481), (28816798, 28816856)] 2021-10-25 09:33:48.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28813880, 28815422, 'FBtr0113301_exon_5') contains intron (28814006, 28815147) 2021-10-25 09:33:48.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28815481, 28817354, 'FBtr0113301_exon_6') contains intron (28816798, 28816856) 2021-10-25 09:33:48.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113301_exon_5', 'FBtr0113301_exon_6'] 2021-10-25 09:33:48.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17481377, 17481455)] 2021-10-25 09:33:48.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267398: ['FBtr0290310', 'FBtr0344755'] 2021-10-25 09:33:48.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036176: ['FBtr0076100'] 2021-10-25 09:33:48.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036176 has a single transcript. 2021-10-25 09:33:48.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036177: ['FBtr0076145'] 2021-10-25 09:33:48.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036177 has a single transcript. 2021-10-25 09:33:48.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036178: ['FBtr0076144'] 2021-10-25 09:33:48.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036178 has a single transcript. 2021-10-25 09:33:48.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036179: ['FBtr0307115', 'FBtr0110884'] 2021-10-25 09:33:48.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261239: ['FBtr0081478', 'FBtr0081479', 'FBtr0081480', 'FBtr0081481'] 2021-10-25 09:33:48.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032643: ['FBtr0080998', 'FBtr0305684'] 2021-10-25 09:33:48.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1343985, 1344057), (1344381, 1344450)] 2021-10-25 09:33:48.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053189: ['FBtr0081940'] 2021-10-25 09:33:48.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053189 has a single transcript. 2021-10-25 09:33:48.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11597459, 11602647), (11601515, 11602647), (11603254, 11603338), (11603490, 11603560)] 2021-10-25 09:33:48.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17483090, 17483155)] 2021-10-25 09:33:48.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053191: ['FBtr0081941'] 2021-10-25 09:33:48.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053191 has a single transcript. 2021-10-25 09:33:48.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001981: ['FBtr0080734'] 2021-10-25 09:33:48.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001981 has a single transcript. 2021-10-25 09:33:48.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053192: ['FBtr0308064'] 2021-10-25 09:33:48.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053192 has a single transcript. 2021-10-25 09:33:48.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267399: ['FBtr0346724'] 2021-10-25 09:33:48.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267399 has a single transcript. 2021-10-25 09:33:48.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001983: ['FBtr0080740'] 2021-10-25 09:33:48.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001983 has a single transcript. 2021-10-25 09:33:48.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053193: ['FBtr0084356', 'FBtr0303509'] 2021-10-25 09:33:48.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267400: ['FBtr0346725'] 2021-10-25 09:33:48.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267400 has a single transcript. 2021-10-25 09:33:48.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001986: ['FBtr0080760'] 2021-10-25 09:33:48.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001986 has a single transcript. 2021-10-25 09:33:48.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267408: ['FBtr0083154'] 2021-10-25 09:33:48.911 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267408 has a single transcript. 2021-10-25 09:33:48.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21237346, 21238280), (21237404, 21238280), (21237420, 21238280), (21238565, 21253554), (21255313, 21255537), (21255828, 21255896), (21256046, 21256945), (21257048, 21257102), (21257257, 21257745)] 2021-10-25 09:33:48.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267411: ['FBtr0346740'] 2021-10-25 09:33:48.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267411 has a single transcript. 2021-10-25 09:33:48.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001987: ['FBtr0080765', 'FBtr0080767', 'FBtr0080768', 'FBtr0080769', 'FBtr0343721'] 2021-10-25 09:33:48.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027589: ['FBtr0088495'] 2021-10-25 09:33:48.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027589 has a single transcript. 2021-10-25 09:33:48.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267412: ['FBtr0346741'] 2021-10-25 09:33:48.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267412 has a single transcript. 2021-10-25 09:33:48.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036180: ['FBtr0301145', 'FBtr0273304', 'FBtr0273305', 'FBtr0273306'] 2021-10-25 09:33:48.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032644: ['FBtr0080984'] 2021-10-25 09:33:48.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032644 has a single transcript. 2021-10-25 09:33:48.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267413: ['FBtr0346743'] 2021-10-25 09:33:48.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267413 has a single transcript. 2021-10-25 09:33:48.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027590: ['FBtr0072436', 'FBtr0343496', 'FBtr0305309', 'FBtr0305310'] 2021-10-25 09:33:48.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032645: ['FBtr0080995'] 2021-10-25 09:33:48.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032645 has a single transcript. 2021-10-25 09:33:48.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267417: ['FBtr0346751'] 2021-10-25 09:33:48.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267417 has a single transcript. 2021-10-25 09:33:48.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23058956, 23059029), (23059983, 23060386), (23059983, 23060371)] 2021-10-25 09:33:48.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039601: ['FBtr0085355'] 2021-10-25 09:33:48.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039601 has a single transcript. 2021-10-25 09:33:48.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:48.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:48.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032646: ['FBtr0080994'] 2021-10-25 09:33:48.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032646 has a single transcript. 2021-10-25 09:33:48.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267418: ['FBtr0346742'] 2021-10-25 09:33:48.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267418 has a single transcript. 2021-10-25 09:33:48.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032647: ['FBtr0080993'] 2021-10-25 09:33:48.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032647 has a single transcript. 2021-10-25 09:33:48.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039602: ['FBtr0085326', 'FBtr0336764'] 2021-10-25 09:33:48.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267419: ['FBtr0346744'] 2021-10-25 09:33:48.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267419 has a single transcript. 2021-10-25 09:33:48.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032648: ['FBtr0303652'] 2021-10-25 09:33:48.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032648 has a single transcript. 2021-10-25 09:33:48.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267420: ['FBtr0346745'] 2021-10-25 09:33:48.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267420 has a single transcript. 2021-10-25 09:33:48.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267422: ['FBtr0346749'] 2021-10-25 09:33:48.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267422 has a single transcript. 2021-10-25 09:33:48.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032649: ['FBtr0080991'] 2021-10-25 09:33:48.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032649 has a single transcript. 2021-10-25 09:33:48.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267423: ['FBtr0346750'] 2021-10-25 09:33:48.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267423 has a single transcript. 2021-10-25 09:33:48.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032650: ['FBtr0080990'] 2021-10-25 09:33:48.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032650 has a single transcript. 2021-10-25 09:33:48.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267424: ['FBtr0346753'] 2021-10-25 09:33:48.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267424 has a single transcript. 2021-10-25 09:33:49.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032651: ['FBtr0080986', 'FBtr0344781', 'FBtr0303252', 'FBtr0303253'] 2021-10-25 09:33:49.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267425: ['FBtr0346761'] 2021-10-25 09:33:49.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267425 has a single transcript. 2021-10-25 09:33:49.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28820505, 28820571), (28820517, 28820571), (28820718, 28820787), (28820996, 28821058)] 2021-10-25 09:33:49.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267426: ['FBtr0346754'] 2021-10-25 09:33:49.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267426 has a single transcript. 2021-10-25 09:33:49.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053194: ['FBtr0079676'] 2021-10-25 09:33:49.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053194 has a single transcript. 2021-10-25 09:33:49.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267427: ['FBtr0346755'] 2021-10-25 09:33:49.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267427 has a single transcript. 2021-10-25 09:33:49.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24767417, 24767474), (24767577, 24768097), (24767577, 24767953), (24767577, 24767638)] 2021-10-25 09:33:49.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267428: ['FBtr0346766'] 2021-10-25 09:33:49.024 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24767474, 24767707, 'FBtr0343496_exon_1') contains intron (24767577, 24767638) 2021-10-25 09:33:49.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267428 has a single transcript. 2021-10-25 09:33:49.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11606198, 11606256), (11606471, 11606535), (11607083, 11607143), (11607346, 11607434), (11607591, 11607651), (11608183, 11608536), (11608604, 11608675), (11609188, 11609285)] 2021-10-25 09:33:49.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343496_exon_1'] 2021-10-25 09:33:49.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.025 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11606256, 11607083, 'FBtr0301145_exon_7') contains intron (11606471, 11606535) 2021-10-25 09:33:49.025 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11608675, 11609465, 'FBtr0273305_exon_1') contains intron (11609188, 11609285) 2021-10-25 09:33:49.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301145_exon_7', 'FBtr0273305_exon_1'] 2021-10-25 09:33:49.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15756937, 15757003), (15757705, 15757766), (15758078, 15758140), (15759360, 15759416), (15759845, 15760209), (15760342, 15760401), (15760574, 15762306), (15760574, 15762688), (15760574, 15762195), (15760574, 15762568), (15762406, 15762688)] 2021-10-25 09:33:49.027 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15762195, 15762758, 'FBtr0343721_exon_1') contains intron (15762406, 15762688) 2021-10-25 09:33:49.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343721_exon_1'] 2021-10-25 09:33:49.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267429: ['FBtr0346768'] 2021-10-25 09:33:49.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267429 has a single transcript. 2021-10-25 09:33:49.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267430: ['FBtr0445191'] 2021-10-25 09:33:49.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267430 has a single transcript. 2021-10-25 09:33:49.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267431: ['FBtr0392909'] 2021-10-25 09:33:49.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267431 has a single transcript. 2021-10-25 09:33:49.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267432: ['FBtr0346771'] 2021-10-25 09:33:49.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267432 has a single transcript. 2021-10-25 09:33:49.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267433: ['FBtr0346772'] 2021-10-25 09:33:49.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267433 has a single transcript. 2021-10-25 09:33:49.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039609: ['FBtr0085328'] 2021-10-25 09:33:49.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039609 has a single transcript. 2021-10-25 09:33:49.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267435: ['FBtr0085778', 'FBtr0330100', 'FBtr0330101', 'FBtr0335410', 'FBtr0335411'] 2021-10-25 09:33:49.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261243: ['FBtr0072697', 'FBtr0072698', 'FBtr0072699', 'FBtr0072700', 'FBtr0072701', 'FBtr0072702', 'FBtr0306557', 'FBtr0333395'] 2021-10-25 09:33:49.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039611: ['FBtr0085329'] 2021-10-25 09:33:49.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039611 has a single transcript. 2021-10-25 09:33:49.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039612: ['FBtr0085349'] 2021-10-25 09:33:49.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039612 has a single transcript. 2021-10-25 09:33:49.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17589579, 17590211), (17590811, 17590871)] 2021-10-25 09:33:49.100 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17589401, 17590811, 'FBtr0080986_exon_1') contains intron (17589579, 17590211) 2021-10-25 09:33:49.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080986_exon_1'] 2021-10-25 09:33:49.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039613: ['FBtr0085330'] 2021-10-25 09:33:49.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039613 has a single transcript. 2021-10-25 09:33:49.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039616: ['FBtr0308601'] 2021-10-25 09:33:49.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039616 has a single transcript. 2021-10-25 09:33:49.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053196: ['FBtr0305141', 'FBtr0305142', 'FBtr0305145', 'FBtr0332343', 'FBtr0332344', 'FBtr0332345', 'FBtr0332346', 'FBtr0332347', 'FBtr0332348', 'FBtr0332349', 'FBtr0332350', 'FBtr0332351', 'FBtr0332352', 'FBtr0332353', 'FBtr0332354', 'FBtr0332355'] 2021-10-25 09:33:49.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039617: ['FBtr0085347'] 2021-10-25 09:33:49.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039617 has a single transcript. 2021-10-25 09:33:49.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039620: ['FBtr0085345'] 2021-10-25 09:33:49.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039620 has a single transcript. 2021-10-25 09:33:49.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039621: ['FBtr0085341'] 2021-10-25 09:33:49.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039621 has a single transcript. 2021-10-25 09:33:49.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039622: ['FBtr0085344', 'FBtr0302515', 'FBtr0302516'] 2021-10-25 09:33:49.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027592: ['FBtr0078062'] 2021-10-25 09:33:49.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027592 has a single transcript. 2021-10-25 09:33:49.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036181: ['FBtr0076140'] 2021-10-25 09:33:49.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036181 has a single transcript. 2021-10-25 09:33:49.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027594: ['FBtr0072799', 'FBtr0072798', 'FBtr0309845', 'FBtr0334078', 'FBtr0334079', 'FBtr0334080'] 2021-10-25 09:33:49.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036183: ['FBtr0076137'] 2021-10-25 09:33:49.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036183 has a single transcript. 2021-10-25 09:33:49.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31204738, 31204803), (31204990, 31205050), (31205292, 31205355), (31205779, 31205837), (31206196, 31206255), (31206397, 31206454), (31206711, 31206766), (31206897, 31206951), (31207561, 31207620), (31207840, 31207934), (31207849, 31207934), (31208069, 31208368), (31208544, 31208642), (31209356, 31209482), (31209698, 31210260), (31209719, 31210260)] 2021-10-25 09:33:49.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036184: ['FBtr0076102'] 2021-10-25 09:33:49.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036184 has a single transcript. 2021-10-25 09:33:49.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036186: ['FBtr0076136'] 2021-10-25 09:33:49.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036186 has a single transcript. 2021-10-25 09:33:49.219 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330101': ['FBtr0335411']} 2021-10-25 09:33:49.219 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0335411']] 2021-10-25 09:33:49.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036187: ['FBtr0076134', 'FBtr0076135'] 2021-10-25 09:33:49.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032652: ['FBtr0080989', 'FBtr0340254'] 2021-10-25 09:33:49.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29027018, 29027078), (29027028, 29027087), (29027028, 29027078)] 2021-10-25 09:33:49.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001989: ['FBtr0080771', 'FBtr0343722'] 2021-10-25 09:33:49.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1502981, 1518176), (1517599, 1518176), (1517755, 1518176), (1517755, 1517986), (1517956, 1518389), (1517956, 1518176), (1517956, 1518213), (1518052, 1518176), (1518796, 1519946), (1520763, 1521133), (1522458, 1522521), (1522644, 1522706)] 2021-10-25 09:33:49.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11646799, 11646860), (11648180, 11648239), (11648319, 11648391)] 2021-10-25 09:33:49.271 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11648239, 11648474, 'FBtr0076135_exon_1') contains intron (11648319, 11648391) 2021-10-25 09:33:49.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076135_exon_1'] 2021-10-25 09:33:49.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15749851, 15750549), (15750651, 15750721)] 2021-10-25 09:33:49.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:49.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1716556, 1716796), (1716556, 1716674), (1716707, 1716796), (1716943, 1717002), (1717308, 1717378), (1717879, 1717946), (1718096, 1723579), (1718153, 1723579), (1718153, 1718705), (1719745, 1719922), (1720169, 1723579), (1723705, 1723769), (1723933, 1723991), (1724225, 1730524)] 2021-10-25 09:33:49.326 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1715709, 1716943, 'FBtr0309845_exon_8') contains intron (1716556, 1716796) 2021-10-25 09:33:49.327 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1715594, 1716943, 'FBtr0334080_exon_10') contains intron (1716556, 1716796) 2021-10-25 09:33:49.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032654: ['FBtr0080988'] 2021-10-25 09:33:49.327 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309845_exon_8', 'FBtr0334080_exon_10'] 2021-10-25 09:33:49.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032654 has a single transcript. 2021-10-25 09:33:49.327 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036188: ['FBtr0076107', 'FBtr0331530'] 2021-10-25 09:33:49.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039623: ['FBtr0085342'] 2021-10-25 09:33:49.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039623 has a single transcript. 2021-10-25 09:33:49.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001990: ['FBtr0080764', 'FBtr0331282'] 2021-10-25 09:33:49.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032656: ['FBtr0081021', 'FBtr0081022', 'FBtr0340182', 'FBtr0290267'] 2021-10-25 09:33:49.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039625: ['FBtr0085419'] 2021-10-25 09:33:49.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039625 has a single transcript. 2021-10-25 09:33:49.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267438: ['FBtr0346783'] 2021-10-25 09:33:49.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267438 has a single transcript. 2021-10-25 09:33:49.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039626: ['FBtr0085418'] 2021-10-25 09:33:49.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039626 has a single transcript. 2021-10-25 09:33:49.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267439: ['FBtr0346784'] 2021-10-25 09:33:49.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267439 has a single transcript. 2021-10-25 09:33:49.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039627: ['FBtr0085360'] 2021-10-25 09:33:49.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039627 has a single transcript. 2021-10-25 09:33:49.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267440: ['FBtr0346785'] 2021-10-25 09:33:49.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267440 has a single transcript. 2021-10-25 09:33:49.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11648951, 11649008), (11649491, 11649550)] 2021-10-25 09:33:49.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039628: ['FBtr0085361'] 2021-10-25 09:33:49.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039628 has a single transcript. 2021-10-25 09:33:49.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15766668, 15766732), (15767079, 15767139), (15768045, 15768105)] 2021-10-25 09:33:49.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267441: ['FBtr0346782'] 2021-10-25 09:33:49.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267441 has a single transcript. 2021-10-25 09:33:49.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039629: ['FBtr0085362'] 2021-10-25 09:33:49.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039629 has a single transcript. 2021-10-25 09:33:49.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267442: ['FBtr0346780'] 2021-10-25 09:33:49.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267442 has a single transcript. 2021-10-25 09:33:49.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267443: ['FBtr0346781'] 2021-10-25 09:33:49.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267443 has a single transcript. 2021-10-25 09:33:49.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039630: ['FBtr0085363', 'FBtr0346138'] 2021-10-25 09:33:49.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267444: ['FBtr0346905'] 2021-10-25 09:33:49.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267444 has a single transcript. 2021-10-25 09:33:49.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267445: ['FBtr0346789'] 2021-10-25 09:33:49.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267445 has a single transcript. 2021-10-25 09:33:49.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17963605, 17972262), (17963605, 17969371), (17969518, 17971871), (17969518, 17972262), (17972003, 17972262)] 2021-10-25 09:33:49.428 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17971871, 17974868, 'FBtr0081022_exon_3') contains intron (17972003, 17972262) 2021-10-25 09:33:49.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081022_exon_3'] 2021-10-25 09:33:49.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036191: ['FBtr0300100', 'FBtr0273362', 'FBtr0344966'] 2021-10-25 09:33:49.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267446: ['FBtr0346787'] 2021-10-25 09:33:49.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267446 has a single transcript. 2021-10-25 09:33:49.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267447: ['FBtr0346791'] 2021-10-25 09:33:49.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267447 has a single transcript. 2021-10-25 09:33:49.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29054632, 29054772), (29055046, 29055100), (29055416, 29055490)] 2021-10-25 09:33:49.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267448: ['FBtr0346800'] 2021-10-25 09:33:49.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267448 has a single transcript. 2021-10-25 09:33:49.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267449: ['FBtr0347028'] 2021-10-25 09:33:49.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267449 has a single transcript. 2021-10-25 09:33:49.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267450: ['FBtr0346803'] 2021-10-25 09:33:49.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267450 has a single transcript. 2021-10-25 09:33:49.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001991: ['FBtr0090005', 'FBtr0090006', 'FBtr0090004', 'FBtr0090003', 'FBtr0332020', 'FBtr0332021', 'FBtr0332022', 'FBtr0332023', 'FBtr0332024', 'FBtr0332025'] 2021-10-25 09:33:49.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267451: ['FBtr0346822'] 2021-10-25 09:33:49.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267451 has a single transcript. 2021-10-25 09:33:49.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267452: ['FBtr0346823'] 2021-10-25 09:33:49.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267452 has a single transcript. 2021-10-25 09:33:49.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267453: ['FBtr0346824'] 2021-10-25 09:33:49.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267453 has a single transcript. 2021-10-25 09:33:49.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267454: ['FBtr0346825'] 2021-10-25 09:33:49.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267454 has a single transcript. 2021-10-25 09:33:49.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039631: ['FBtr0085364'] 2021-10-25 09:33:49.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039631 has a single transcript. 2021-10-25 09:33:49.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4479779, 4479843), (4480269, 4480333), (4483561, 4483634), (4484630, 4484691), (4484886, 4484947), (4485148, 4485507), (4487193, 4515396), (4487193, 4487448), (4488387, 4488453), (4489113, 4496246), (4489113, 4515396), (4489113, 4504776), (4489113, 4489667), (4490318, 4490375), (4493720, 4493798), (4494104, 4494170), (4496159, 4496246), (4497209, 4497275), (4497923, 4497983), (4498298, 4498361), (4499960, 4500024), (4500339, 4500403), (4501666, 4501725), (4502064, 4502139), (4502451, 4502516), (4503164, 4503220), (4503526, 4503584), (4503899, 4503957), (4504290, 4504353), (4504671, 4504776), (4505727, 4505793), (4506093, 4506153), (4506093, 4515396), (4506498, 4506558), (4506870, 4506933), (4507878, 4507938), (4508247, 4508310), (4508649, 4508712), (4509024, 4509081), (4509726, 4509781), (4510396, 4510465), (4510801, 4510858), (4511176, 4511230), (4511878, 4511932), (4512235, 4512289), (4512586, 4512649), (4512994, 4513055), (4513376, 4513434), (4513761, 4515396), (4518588, 4518709), (4520299, 4520376), (4520299, 4526223), (4520703, 4521042), (4521351, 4521416), (4521755, 4521812), (4522442, 4522640), (4522964, 4523030), (4522964, 4526223), (4523357, 4523751), (4524069, 4524297), (4524624, 4524690), (4525023, 4525086), (4525404, 4525603), (4525927, 4526223), (4526541, 4526605), (4527229, 4527295), (4529728, 4529791), (4530277, 4530530), (4530713, 4532102), (4530713, 4530831), (4531053, 4531352), (4531053, 4532102), (4531970, 4532102), (4532180, 4532242), (4532386, 4533570), (4532386, 4552242), (4532386, 4548004), (4534974, 4535243), (4538827, 4538912), (4540356, 4540441), (4546933, 4548004), (4548802, 4552242), (4552335, 4552396), (4554205, 4554350), (4554659, 4555205), (4554659, 4563679), (4562483, 4563110), (4562483, 4563679), (4563467, 4563679), (4564189, 4570478), (4570595, 4570679), (4570781, 4570856), (4571085, 4574283), (4574342, 4591512), (4591848, 4612291), (4591848, 4594949), (4612560, 4614236)] 2021-10-25 09:33:49.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11684645, 11686069), (11686208, 11686724), (11687559, 11687622), (11688090, 11688151), (11688338, 11689107), (11688344, 11689107)] 2021-10-25 09:33:49.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267455: ['FBtr0346826'] 2021-10-25 09:33:49.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267455 has a single transcript. 2021-10-25 09:33:49.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039632: ['FBtr0085417'] 2021-10-25 09:33:49.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039632 has a single transcript. 2021-10-25 09:33:49.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267456: ['FBtr0346827'] 2021-10-25 09:33:49.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267456 has a single transcript. 2021-10-25 09:33:49.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267457: ['FBtr0346828'] 2021-10-25 09:33:49.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267457 has a single transcript. 2021-10-25 09:33:49.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039633: ['FBtr0085365', 'FBtr0330299', 'FBtr0330300', 'FBtr0330301'] 2021-10-25 09:33:49.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267458: ['FBtr0346829'] 2021-10-25 09:33:49.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267458 has a single transcript. 2021-10-25 09:33:49.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032658: ['FBtr0081024'] 2021-10-25 09:33:49.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032658 has a single transcript. 2021-10-25 09:33:49.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267459: ['FBtr0346830'] 2021-10-25 09:33:49.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267459 has a single transcript. 2021-10-25 09:33:49.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032660: ['FBtr0302030', 'FBtr0302031'] 2021-10-25 09:33:49.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267460: ['FBtr0346831'] 2021-10-25 09:33:49.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267460 has a single transcript. 2021-10-25 09:33:49.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267461: ['FBtr0346832'] 2021-10-25 09:33:49.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267461 has a single transcript. 2021-10-25 09:33:49.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267462: ['FBtr0346833'] 2021-10-25 09:33:49.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267462 has a single transcript. 2021-10-25 09:33:49.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027596: ['FBtr0087429', 'FBtr0087430', 'FBtr0087431', 'FBtr0112929', 'FBtr0301334', 'FBtr0303756', 'FBtr0303757', 'FBtr0303758', 'FBtr0332856'] 2021-10-25 09:33:49.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267463: ['FBtr0346835'] 2021-10-25 09:33:49.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267463 has a single transcript. 2021-10-25 09:33:49.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267464: ['FBtr0346836'] 2021-10-25 09:33:49.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267464 has a single transcript. 2021-10-25 09:33:49.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261244: ['FBtr0340290', 'FBtr0340291', 'FBtr0073825', 'FBtr0073826', 'FBtr0290302', 'FBtr0290303'] 2021-10-25 09:33:49.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267465: ['FBtr0346837', 'FBtr0346838'] 2021-10-25 09:33:49.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18010865, 18010933), (18011011, 18011077), (18011206, 18011262)] 2021-10-25 09:33:49.648 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036192: ['FBtr0300097'] 2021-10-25 09:33:49.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036192 has a single transcript. 2021-10-25 09:33:49.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29063147, 29063802), (29064612, 29097231), (29088847, 29097231), (29097395, 29097551), (29097860, 29097966), (29101429, 29101518), (29104045, 29104149), (29104248, 29104309), (29104448, 29104503)] 2021-10-25 09:33:49.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036193: ['FBtr0290309', 'FBtr0332762'] 2021-10-25 09:33:49.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1649093, 1649177)] 2021-10-25 09:33:49.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032663: ['FBtr0081045'] 2021-10-25 09:33:49.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032663 has a single transcript. 2021-10-25 09:33:49.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032664: ['FBtr0081033'] 2021-10-25 09:33:49.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032664 has a single transcript. 2021-10-25 09:33:49.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11691838, 11691899), (11692359, 11692421), (11692566, 11692617)] 2021-10-25 09:33:49.721 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11692421, 11692757, 'FBtr0332762_exon_3') contains intron (11692566, 11692617) 2021-10-25 09:33:49.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332762_exon_3'] 2021-10-25 09:33:49.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032665: ['FBtr0081034', 'FBtr0340574'] 2021-10-25 09:33:49.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16165935, 16166217), (16166451, 16171971), (16168471, 16169486), (16168557, 16169486), (16169906, 16170258), (16171048, 16171971), (16171144, 16171971), (16173248, 16173318), (16173544, 16173717), (16173823, 16174056), (16174196, 16174415), (16174522, 16174854), (16175007, 16175434), (16175616, 16175716), (16176236, 16176299), (16176525, 16176591), (16176802, 16176864), (16177074, 16177132), (16177251, 16177335), (16177394, 16178374), (16177394, 16177677), (16177394, 16177692), (16177804, 16178906), (16178492, 16178906), (16179036, 16179200), (16179367, 16179458), (16179546, 16180138), (16179546, 16181803), (16180246, 16181803), (16180246, 16182778), (16181911, 16182778), (16182831, 16182892), (16183039, 16183103), (16183575, 16183629), (16183713, 16183768), (16183834, 16183889), (16184078, 16184137), (16184386, 16184446), (16185106, 16185192), (16185626, 16189024), (16185626, 16186110), (16185626, 16187454), (16186151, 16189024), (16187840, 16189024), (16189155, 16189210)] 2021-10-25 09:33:49.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267468: ['FBtr0347407'] 2021-10-25 09:33:49.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267468 has a single transcript. 2021-10-25 09:33:49.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267469: ['FBtr0346840'] 2021-10-25 09:33:49.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267469 has a single transcript. 2021-10-25 09:33:49.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267470: ['FBtr0346841'] 2021-10-25 09:33:49.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267470 has a single transcript. 2021-10-25 09:33:49.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:49.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13784189, 13785706), (13784276, 13785706), (13785952, 13801678), (13801773, 13801901), (13802008, 13802066), (13802171, 13802236), (13802338, 13802591), (13802769, 13802847), (13803267, 13803325), (13803850, 13803908), (13804050, 13804122), (13804227, 13804293), (13804421, 13806531), (13804421, 13805451), (13805475, 13806531), (13805643, 13806531), (13806664, 13808369), (13806664, 13809280), (13808494, 13808793)] 2021-10-25 09:33:49.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13808369, 13811493, 'FBtr0340291_exon_14') contains intron (13808494, 13808793) 2021-10-25 09:33:49.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13808369, 13811493, 'FBtr0073825_exon_15') contains intron (13808494, 13808793) 2021-10-25 09:33:49.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340291_exon_14', 'FBtr0073825_exon_15'] 2021-10-25 09:33:49.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267471: ['FBtr0346842'] 2021-10-25 09:33:49.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267471 has a single transcript. 2021-10-25 09:33:49.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036194: ['FBtr0076130', 'FBtr0076131', 'FBtr0332766'] 2021-10-25 09:33:49.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267472: ['FBtr0346843', 'FBtr0346844'] 2021-10-25 09:33:49.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039634: ['FBtr0085416'] 2021-10-25 09:33:49.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039634 has a single transcript. 2021-10-25 09:33:49.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14902140, 14902202), (14902403, 14902510), (14902403, 14902506), (14902723, 14902784), (14903031, 14903135), (14903564, 14903630), (14903564, 14904072), (14905451, 14905513), (14905953, 14910223), (14905953, 14907487), (14905953, 14906017), (14905953, 14907024), (14910716, 14911103), (14911372, 14914847), (14911372, 14912005), (14914891, 14916873), (14914891, 14926321), (14926782, 14927927)] 2021-10-25 09:33:49.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039635: ['FBtr0085366', 'FBtr0085367', 'FBtr0085368', 'FBtr0085369'] 2021-10-25 09:33:49.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032666: ['FBtr0081036', 'FBtr0081037', 'FBtr0081035', 'FBtr0340575', 'FBtr0340576', 'FBtr0340577'] 2021-10-25 09:33:49.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:49.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11694745, 11694809), (11695578, 11696874), (11695578, 11696414), (11695578, 11696350)] 2021-10-25 09:33:49.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267473: ['FBtr0346845'] 2021-10-25 09:33:49.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267473 has a single transcript. 2021-10-25 09:33:49.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267474: ['FBtr0346846'] 2021-10-25 09:33:49.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267474 has a single transcript. 2021-10-25 09:33:49.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267475: ['FBtr0346847'] 2021-10-25 09:33:49.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267475 has a single transcript. 2021-10-25 09:33:49.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29113140, 29113208), (29113449, 29113993), (29114155, 29114428), (29114155, 29115093), (29115505, 29115566), (29115686, 29115747)] 2021-10-25 09:33:49.918 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29113104, 29113449, 'FBtr0085368_exon_1') contains intron (29113140, 29113208) 2021-10-25 09:33:49.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085368_exon_1'] 2021-10-25 09:33:49.919 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267476: ['FBtr0346848'] 2021-10-25 09:33:49.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267476 has a single transcript. 2021-10-25 09:33:49.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036195: ['FBtr0301326', 'FBtr0332765'] 2021-10-25 09:33:49.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267477: ['FBtr0346849'] 2021-10-25 09:33:49.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267477 has a single transcript. 2021-10-25 09:33:49.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267478: ['FBtr0346850'] 2021-10-25 09:33:49.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267478 has a single transcript. 2021-10-25 09:33:49.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267479: ['FBtr0346851'] 2021-10-25 09:33:49.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267479 has a single transcript. 2021-10-25 09:33:49.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267480: ['FBtr0346852'] 2021-10-25 09:33:49.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267480 has a single transcript. 2021-10-25 09:33:49.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11697261, 11697345), (11697261, 11697341), (11697565, 11697624), (11697862, 11697917), (11698096, 11698155)] 2021-10-25 09:33:49.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:49.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18120072, 18123348), (18120204, 18123348), (18122588, 18123348), (18122588, 18122840), (18122920, 18123348), (18123908, 18126496), (18126839, 18127465), (18127869, 18127944), (18128066, 18128130), (18128246, 18128301), (18128419, 18128473)] 2021-10-25 09:33:49.966 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18122527, 18122920, 'FBtr0081037_exon_1') contains intron (18122588, 18122840) 2021-10-25 09:33:49.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267481: ['FBtr0346853'] 2021-10-25 09:33:49.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081037_exon_1'] 2021-10-25 09:33:49.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267481 has a single transcript. 2021-10-25 09:33:49.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:49.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267482: ['FBtr0346854'] 2021-10-25 09:33:49.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267482 has a single transcript. 2021-10-25 09:33:49.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267483: ['FBtr0346855'] 2021-10-25 09:33:49.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267483 has a single transcript. 2021-10-25 09:33:49.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267484: ['FBtr0346858'] 2021-10-25 09:33:49.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267484 has a single transcript. 2021-10-25 09:33:50.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267485: ['FBtr0346857'] 2021-10-25 09:33:50.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267485 has a single transcript. 2021-10-25 09:33:50.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267486: ['FBtr0081061', 'FBtr0343821', 'FBtr0343822'] 2021-10-25 09:33:50.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261245: ['FBtr0074318'] 2021-10-25 09:33:50.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261245 has a single transcript. 2021-10-25 09:33:50.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036196: ['FBtr0076124', 'FBtr0076125', 'FBtr0076126', 'FBtr0076127', 'FBtr0076128'] 2021-10-25 09:33:50.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261258: ['FBtr0309230', 'FBtr0078346', 'FBtr0333385', 'FBtr0333386'] 2021-10-25 09:33:50.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039636: ['FBtr0085370'] 2021-10-25 09:33:50.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039636 has a single transcript. 2021-10-25 09:33:50.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039637: ['FBtr0085371', 'FBtr0085372', 'FBtr0085373'] 2021-10-25 09:33:50.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18184198, 18184423), (18184201, 18184423)] 2021-10-25 09:33:50.076 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18180995, 18185007, 'FBtr0343822_exon_1') contains intron (18184198, 18184423) 2021-10-25 09:33:50.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343822_exon_1'] 2021-10-25 09:33:50.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21383084, 21411529), (21383084, 21419606), (21411578, 21419606), (21419797, 21419858), (21420170, 21420250), (21420362, 21420464), (21420362, 21420440), (21420689, 21421567)] 2021-10-25 09:33:50.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11701173, 11701237), (11701419, 11701481), (11701771, 11707304), (11707571, 11707687), (11707571, 11708391), (11707571, 11708407), (11707571, 11708307), (11707571, 11708319)] 2021-10-25 09:33:50.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29123489, 29123800), (29123499, 29123800), (29124104, 29125404), (29124104, 29125407), (29125737, 29125806)] 2021-10-25 09:33:50.146 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29123415, 29124104, 'FBtr0085372_exon_1') contains intron (29123489, 29123800) 2021-10-25 09:33:50.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085372_exon_1'] 2021-10-25 09:33:50.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027597: ['FBtr0077903'] 2021-10-25 09:33:50.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027597 has a single transcript. 2021-10-25 09:33:50.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267487: ['FBtr0072716', 'FBtr0072717', 'FBtr0072718', 'FBtr0072719', 'FBtr0310161'] 2021-10-25 09:33:50.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001992: ['FBtr0080828', 'FBtr0343812'] 2021-10-25 09:33:50.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027598: ['FBtr0085704', 'FBtr0085705', 'FBtr0085706', 'FBtr0085707', 'FBtr0310068', 'FBtr0310069', 'FBtr0310070', 'FBtr0310071', 'FBtr0310072', 'FBtr0310424'] 2021-10-25 09:33:50.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032668: ['FBtr0081038'] 2021-10-25 09:33:50.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032668 has a single transcript. 2021-10-25 09:33:50.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032669: ['FBtr0081048', 'FBtr0329926'] 2021-10-25 09:33:50.242 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:50.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039638: ['FBtr0085414'] 2021-10-25 09:33:50.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039638 has a single transcript. 2021-10-25 09:33:50.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039639: ['FBtr0085413'] 2021-10-25 09:33:50.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039639 has a single transcript. 2021-10-25 09:33:50.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261260: ['FBtr0302153', 'FBtr0343369', 'FBtr0343370', 'FBtr0343371'] 2021-10-25 09:33:50.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18155057, 18155119), (18155060, 18155119), (18155352, 18155414), (18155528, 18155590)] 2021-10-25 09:33:50.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039640: ['FBtr0085382', 'FBtr0085383', 'FBtr0335406'] 2021-10-25 09:33:50.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1342633, 1344403), (1344529, 1344625), (1345161, 1345497), (1345864, 1345942), (1346205, 1346276), (1346450, 1424790), (1346450, 1349198), (1346450, 1472917), (1346450, 1350371), (1474182, 1474235), (1474339, 1474610)] 2021-10-25 09:33:50.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001994: ['FBtr0080854', 'FBtr0343814'] 2021-10-25 09:33:50.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036198: ['FBtr0076123'] 2021-10-25 09:33:50.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036198 has a single transcript. 2021-10-25 09:33:50.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032670: ['FBtr0081049'] 2021-10-25 09:33:50.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032670 has a single transcript. 2021-10-25 09:33:50.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29138763, 29142209), (29139195, 29142209), (29139494, 29142209), (29143065, 29143128), (29143845, 29143908), (29144572, 29144631), (29144837, 29144903), (29145212, 29145272)] 2021-10-25 09:33:50.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036199: ['FBtr0076114', 'FBtr0076115'] 2021-10-25 09:33:50.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032671: ['FBtr0081062', 'FBtr0343823'] 2021-10-25 09:33:50.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16267017, 16278862), (16279169, 16287097)] 2021-10-25 09:33:50.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.370 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9360534, 9360605), (9360853, 9360932), (9363119, 9363180), (9363493, 9363556), (9365061, 9365125), (9365532, 9365591), (9365803, 9365877), (9371538, 9371618), (9373937, 9375003), (9375258, 9375356), (9375629, 9382609), (9382741, 9383206), (9383365, 9471998), (9472657, 9499885), (9472657, 9495975), (9472657, 9499873), (9473266, 9495673)] 2021-10-25 09:33:50.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.372 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11721191, 11721316), (11721464, 11722004), (11722418, 11722471), (11722532, 11722588), (11723157, 11727881)] 2021-10-25 09:33:50.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18157863, 18157917), (18159013, 18159081)] 2021-10-25 09:33:50.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0001995: ['FBtr0080843'] 2021-10-25 09:33:50.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0001995 has a single transcript. 2021-10-25 09:33:50.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002021: ['FBtr0081177'] 2021-10-25 09:33:50.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002021 has a single transcript. 2021-10-25 09:33:50.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002022: ['FBtr0081143'] 2021-10-25 09:33:50.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002022 has a single transcript. 2021-10-25 09:33:50.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30809283, 30816874), (30809363, 30816874), (30817124, 30817197), (30817309, 30817633), (30818207, 30820880), (30818207, 30824277), (30818207, 30820886), (30821057, 30824277), (30822548, 30824277), (30822574, 30824277), (30823702, 30824277), (30824886, 30824954), (30826026, 30826717)] 2021-10-25 09:33:50.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30824954, 30827005, 'FBtr0310424_exon_7') contains intron (30826026, 30826717) 2021-10-25 09:33:50.446 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310424_exon_7'] 2021-10-25 09:33:50.446 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036202: ['FBtr0113164', 'FBtr0332132'] 2021-10-25 09:33:50.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039641: ['FBtr0085412'] 2021-10-25 09:33:50.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039641 has a single transcript. 2021-10-25 09:33:50.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002023: ['FBtr0081169', 'FBtr0081170', 'FBtr0309832', 'FBtr0309833', 'FBtr0309834', 'FBtr0309835', 'FBtr0329940'] 2021-10-25 09:33:50.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032677: ['FBtr0081050', 'FBtr0345614'] 2021-10-25 09:33:50.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039642: ['FBtr0085411', 'FBtr0335407'] 2021-10-25 09:33:50.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053198: ['FBtr0089842', 'FBtr0340331'] 2021-10-25 09:33:50.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11736765, 11736857), (11737283, 11737348), (11737507, 11737585), (11737708, 11737784), (11737929, 11743805), (11744029, 11759625), (11760110, 11765605), (11760110, 11765851)] 2021-10-25 09:33:50.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267488: ['FBtr0079543'] 2021-10-25 09:33:50.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267488 has a single transcript. 2021-10-25 09:33:50.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267489: ['FBtr0346773'] 2021-10-25 09:33:50.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267489 has a single transcript. 2021-10-25 09:33:50.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:50.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267490: ['FBtr0346739'] 2021-10-25 09:33:50.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267490 has a single transcript. 2021-10-25 09:33:50.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29147880, 29147950)] 2021-10-25 09:33:50.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267491: ['FBtr0346752'] 2021-10-25 09:33:50.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267491 has a single transcript. 2021-10-25 09:33:50.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267492: ['FBtr0346746'] 2021-10-25 09:33:50.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267492 has a single transcript. 2021-10-25 09:33:50.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267493: ['FBtr0346748'] 2021-10-25 09:33:50.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267493 has a single transcript. 2021-10-25 09:33:50.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18277681, 18277750), (18277855, 18277929)] 2021-10-25 09:33:50.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267494: ['FBtr0346747'] 2021-10-25 09:33:50.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267494 has a single transcript. 2021-10-25 09:33:50.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261261: ['FBtr0302090', 'FBtr0302091', 'FBtr0302092', 'FBtr0334947', 'FBtr0334948'] 2021-10-25 09:33:50.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267495: ['FBtr0345084'] 2021-10-25 09:33:50.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267495 has a single transcript. 2021-10-25 09:33:50.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036203: ['FBtr0076119'] 2021-10-25 09:33:50.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036203 has a single transcript. 2021-10-25 09:33:50.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267496: ['FBtr0346875'] 2021-10-25 09:33:50.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267496 has a single transcript. 2021-10-25 09:33:50.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036204: ['FBtr0076089'] 2021-10-25 09:33:50.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036204 has a single transcript. 2021-10-25 09:33:50.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267497: ['FBtr0346876'] 2021-10-25 09:33:50.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267497 has a single transcript. 2021-10-25 09:33:50.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267498: ['FBtr0346878'] 2021-10-25 09:33:50.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267498 has a single transcript. 2021-10-25 09:33:50.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036205: ['FBtr0076028', 'FBtr0332128'] 2021-10-25 09:33:50.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039644: ['FBtr0085387', 'FBtr0085386'] 2021-10-25 09:33:50.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032680: ['FBtr0081063'] 2021-10-25 09:33:50.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032680 has a single transcript. 2021-10-25 09:33:50.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267499: ['FBtr0346879'] 2021-10-25 09:33:50.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267499 has a single transcript. 2021-10-25 09:33:50.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032681: ['FBtr0081085', 'FBtr0081086', 'FBtr0300675', 'FBtr0300676'] 2021-10-25 09:33:50.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267500: ['FBtr0346880'] 2021-10-25 09:33:50.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267500 has a single transcript. 2021-10-25 09:33:50.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053199: ['FBtr0088688', 'FBtr0307344'] 2021-10-25 09:33:50.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267501: ['FBtr0346882'] 2021-10-25 09:33:50.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267501 has a single transcript. 2021-10-25 09:33:50.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267502: ['FBtr0346883'] 2021-10-25 09:33:50.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267502 has a single transcript. 2021-10-25 09:33:50.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11777249, 11777305), (11777249, 11777308), (11777505, 11778217), (11778311, 11778424)] 2021-10-25 09:33:50.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.625 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29158347, 29158498), (29158690, 29160176), (29160407, 29160470), (29162456, 29162516), (29163070, 29163212), (29164161, 29164224)] 2021-10-25 09:33:50.625 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29158121, 29158690, 'FBtr0085387_exon_1') contains intron (29158347, 29158498) 2021-10-25 09:33:50.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085387_exon_1'] 2021-10-25 09:33:50.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19080496, 19080560), (19080755, 19081014), (19081166, 19081229), (19081422, 19081491), (19081694, 19081819), (19081994, 19105722), (19081994, 19082096), (19081994, 19082919), (19106165, 19107386), (19106165, 19108036)] 2021-10-25 09:33:50.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267503: ['FBtr0346884'] 2021-10-25 09:33:50.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267503 has a single transcript. 2021-10-25 09:33:50.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267504: ['FBtr0346885'] 2021-10-25 09:33:50.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267504 has a single transcript. 2021-10-25 09:33:50.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267505: ['FBtr0346873'] 2021-10-25 09:33:50.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267505 has a single transcript. 2021-10-25 09:33:50.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8948941, 8950705), (8950791, 8950910)] 2021-10-25 09:33:50.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.651 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0309833': ['FBtr0329940']} 2021-10-25 09:33:50.651 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329940']] 2021-10-25 09:33:50.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267506: ['FBtr0346877'] 2021-10-25 09:33:50.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267506 has a single transcript. 2021-10-25 09:33:50.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267507: ['FBtr0346881'] 2021-10-25 09:33:50.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267507 has a single transcript. 2021-10-25 09:33:50.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267508: ['FBtr0346886'] 2021-10-25 09:33:50.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267508 has a single transcript. 2021-10-25 09:33:50.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5686270, 5687040), (5686270, 5686788), (5687369, 5697026), (5697485, 5707183), (5702927, 5707183), (5707941, 5708020), (5707941, 5708498), (5708182, 5708498), (5709386, 5709441), (5709584, 5709643), (5710236, 5710293), (5710863, 5710930)] 2021-10-25 09:33:50.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036206: ['FBtr0076085'] 2021-10-25 09:33:50.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036206 has a single transcript. 2021-10-25 09:33:50.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039645: ['FBtr0273260'] 2021-10-25 09:33:50.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039645 has a single transcript. 2021-10-25 09:33:50.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267509: ['FBtr0346869'] 2021-10-25 09:33:50.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267509 has a single transcript. 2021-10-25 09:33:50.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036207: ['FBtr0076029'] 2021-10-25 09:33:50.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036207 has a single transcript. 2021-10-25 09:33:50.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267510: ['FBtr0346870'] 2021-10-25 09:33:50.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267510 has a single transcript. 2021-10-25 09:33:50.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039647: ['FBtr0113303', 'FBtr0113304', 'FBtr0334533', 'FBtr0334534'] 2021-10-25 09:33:50.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036208: ['FBtr0076084'] 2021-10-25 09:33:50.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036208 has a single transcript. 2021-10-25 09:33:50.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267511: ['FBtr0346872'] 2021-10-25 09:33:50.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267511 has a single transcript. 2021-10-25 09:33:50.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053200: ['FBtr0071826', 'FBtr0307213', 'FBtr0339534'] 2021-10-25 09:33:50.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267512: ['FBtr0346887'] 2021-10-25 09:33:50.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267512 has a single transcript. 2021-10-25 09:33:50.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18473328, 18473395), (18473496, 18474118), (18474582, 18475153), (18474582, 18474902), (18474956, 18475153), (18475273, 18475329), (18475273, 18475335), (18476334, 18476393), (18476508, 18476774), (18476913, 18476975), (18477038, 18483893), (18484316, 18484373)] 2021-10-25 09:33:50.706 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18483893, 18484438, 'FBtr0081085_exon_1') contains intron (18484316, 18484373) 2021-10-25 09:33:50.706 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18483893, 18484513, 'FBtr0300675_exon_1') contains intron (18484316, 18484373) 2021-10-25 09:33:50.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036210: ['FBtr0076031'] 2021-10-25 09:33:50.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036210 has a single transcript. 2021-10-25 09:33:50.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081085_exon_1', 'FBtr0300675_exon_1'] 2021-10-25 09:33:50.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267513: ['FBtr0346888'] 2021-10-25 09:33:50.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267513 has a single transcript. 2021-10-25 09:33:50.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267514: ['FBtr0346889'] 2021-10-25 09:33:50.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036211: ['FBtr0076078', 'FBtr0076079', 'FBtr0110868', 'FBtr0110869', 'FBtr0301135', 'FBtr0343994', 'FBtr0302136'] 2021-10-25 09:33:50.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267514 has a single transcript. 2021-10-25 09:33:50.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267515: ['FBtr0346891'] 2021-10-25 09:33:50.731 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267515 has a single transcript. 2021-10-25 09:33:50.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267516: ['FBtr0346899'] 2021-10-25 09:33:50.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267516 has a single transcript. 2021-10-25 09:33:50.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267517: ['FBtr0346893'] 2021-10-25 09:33:50.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267517 has a single transcript. 2021-10-25 09:33:50.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267518: ['FBtr0346894'] 2021-10-25 09:33:50.759 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267518 has a single transcript. 2021-10-25 09:33:50.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267519: ['FBtr0346895'] 2021-10-25 09:33:50.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267519 has a single transcript. 2021-10-25 09:33:50.767 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22408723, 22408782)] 2021-10-25 09:33:50.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.768 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267520: ['FBtr0346903'] 2021-10-25 09:33:50.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267520 has a single transcript. 2021-10-25 09:33:50.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267521: ['FBtr0346900'] 2021-10-25 09:33:50.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267521 has a single transcript. 2021-10-25 09:33:50.788 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29173994, 29176554), (29173994, 29174933), (29173994, 29176545), (29175428, 29176545), (29175428, 29176554), (29176742, 29177388), (29177503, 29177599), (29177740, 29178666), (29178819, 29181158), (29181872, 29194887)] 2021-10-25 09:33:50.789 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267522: ['FBtr0346902'] 2021-10-25 09:33:50.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267522 has a single transcript. 2021-10-25 09:33:50.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267523: ['FBtr0346897'] 2021-10-25 09:33:50.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267523 has a single transcript. 2021-10-25 09:33:50.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267524: ['FBtr0346898'] 2021-10-25 09:33:50.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267524 has a single transcript. 2021-10-25 09:33:50.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267525: ['FBtr0346913'] 2021-10-25 09:33:50.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267525 has a single transcript. 2021-10-25 09:33:50.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267526: ['FBtr0346914'] 2021-10-25 09:33:50.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267526 has a single transcript. 2021-10-25 09:33:50.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002031: ['FBtr0081164', 'FBtr0081165', 'FBtr0346428'] 2021-10-25 09:33:50.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267527: ['FBtr0346915'] 2021-10-25 09:33:50.859 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267527 has a single transcript. 2021-10-25 09:33:50.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027599: ['FBtr0072409'] 2021-10-25 09:33:50.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027599 has a single transcript. 2021-10-25 09:33:50.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032682: ['FBtr0300674', 'FBtr0332321'] 2021-10-25 09:33:50.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267528: ['FBtr0346916'] 2021-10-25 09:33:50.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267528 has a single transcript. 2021-10-25 09:33:50.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027600: ['FBtr0079934'] 2021-10-25 09:33:50.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027600 has a single transcript. 2021-10-25 09:33:50.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053202: ['FBtr0081704', 'FBtr0336453'] 2021-10-25 09:33:50.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11817316, 11818087), (11817652, 11818087), (11817694, 11818087), (11818187, 11818253), (11818907, 11819820), (11818907, 11821833), (11822092, 11822224)] 2021-10-25 09:33:50.874 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11816982, 11818187, 'FBtr0301135_exon_4') contains intron (11817316, 11818087) 2021-10-25 09:33:50.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267529: ['FBtr0346917'] 2021-10-25 09:33:50.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261262: ['FBtr0304688', 'FBtr0304685', 'FBtr0304686', 'FBtr0304687'] 2021-10-25 09:33:50.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301135_exon_4'] 2021-10-25 09:33:50.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267529 has a single transcript. 2021-10-25 09:33:50.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027601: ['FBtr0073972', 'FBtr0343521', 'FBtr0303294', 'FBtr0308838'] 2021-10-25 09:33:50.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267530: ['FBtr0346918'] 2021-10-25 09:33:50.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267530 has a single transcript. 2021-10-25 09:33:50.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267531: ['FBtr0346919'] 2021-10-25 09:33:50.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267531 has a single transcript. 2021-10-25 09:33:50.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267532: ['FBtr0346940'] 2021-10-25 09:33:50.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267532 has a single transcript. 2021-10-25 09:33:50.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18486202, 18486625), (18486934, 18487016)] 2021-10-25 09:33:50.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267533: ['FBtr0346920'] 2021-10-25 09:33:50.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267533 has a single transcript. 2021-10-25 09:33:50.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6531783, 6531945), (6532051, 6532635), (6532844, 6538306), (6538467, 6542570), (6542641, 6545674), (6545973, 6566134), (6566877, 6592883)] 2021-10-25 09:33:50.920 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19122817, 19123120), (19123556, 19123756)] 2021-10-25 09:33:50.920 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.921 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.921 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267534: ['FBtr0346921'] 2021-10-25 09:33:50.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267534 has a single transcript. 2021-10-25 09:33:50.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267535: ['FBtr0346922'] 2021-10-25 09:33:50.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267535 has a single transcript. 2021-10-25 09:33:50.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039648: ['FBtr0085389'] 2021-10-25 09:33:50.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039648 has a single transcript. 2021-10-25 09:33:50.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267536: ['FBtr0346941'] 2021-10-25 09:33:50.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267536 has a single transcript. 2021-10-25 09:33:50.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039650: ['FBtr0085407'] 2021-10-25 09:33:50.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039650 has a single transcript. 2021-10-25 09:33:50.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267537: ['FBtr0346942'] 2021-10-25 09:33:50.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267537 has a single transcript. 2021-10-25 09:33:50.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039651: ['FBtr0085406'] 2021-10-25 09:33:50.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039651 has a single transcript. 2021-10-25 09:33:50.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267538: ['FBtr0346943'] 2021-10-25 09:33:50.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267538 has a single transcript. 2021-10-25 09:33:50.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18929564, 18931143), (18931387, 18937522), (18931387, 18937527), (18937640, 18943052), (18943115, 18947290), (18948007, 18968451), (18948007, 18969418), (18950603, 18958361), (18959924, 18969418), (18968550, 18969418), (18969596, 18969681), (18969708, 18969768), (18969977, 18970074), (18970288, 18970630), (18970848, 18971289), (18971416, 18971486), (18971588, 18971783), (18972212, 18972276), (18972680, 18972749), (18972919, 18972981), (18973159, 18974990), (18975170, 18975457), (18975170, 18975242), (18975281, 18975457)] 2021-10-25 09:33:50.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039654: ['FBtr0085394'] 2021-10-25 09:33:50.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039654 has a single transcript. 2021-10-25 09:33:50.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032683: ['FBtr0300341', 'FBtr0332322', 'FBtr0332323'] 2021-10-25 09:33:50.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14935272, 14935330), (14935445, 14935875), (14936418, 14946270), (14946481, 14950317), (14950866, 14951102), (14951211, 14951621), (14951211, 14953512), (14951211, 14951574), (14951805, 14951916)] 2021-10-25 09:33:50.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:50.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:50.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267539: ['FBtr0346944', 'FBtr0346945'] 2021-10-25 09:33:50.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039655: ['FBtr0113305'] 2021-10-25 09:33:50.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039655 has a single transcript. 2021-10-25 09:33:50.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039656: ['FBtr0472599'] 2021-10-25 09:33:50.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039656 has a single transcript. 2021-10-25 09:33:50.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053203: ['FBtr0301016', 'FBtr0301017', 'FBtr0330302'] 2021-10-25 09:33:50.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039659: ['FBtr0334874', 'FBtr0334875'] 2021-10-25 09:33:51.004 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10127913, 10128062)] 2021-10-25 09:33:51.004 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10127908, 10128618, 'FBtr0346944_exon_1') contains intron (10127913, 10128062) 2021-10-25 09:33:51.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346944_exon_1'] 2021-10-25 09:33:51.005 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002036: ['FBtr0081155'] 2021-10-25 09:33:51.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002036 has a single transcript. 2021-10-25 09:33:51.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29295085, 29295160), (29296972, 29297054), (29296993, 29297054)] 2021-10-25 09:33:51.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18489781, 18489845), (18490749, 18490819), (18491483, 18491540), (18491694, 18491753), (18493153, 18493499), (18494528, 18494650), (18495239, 18495298), (18495480, 18495554), (18495785, 18495844), (18496041, 18500712), (18501437, 18503812), (18501437, 18503834)] 2021-10-25 09:33:51.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002044: ['FBtr0081244', 'FBtr0081245', 'FBtr0331325', 'FBtr0331326'] 2021-10-25 09:33:51.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28872092, 28872151), (28872292, 28872426), (28872292, 28872519), (28872435, 28872519), (28872657, 28872716), (28872820, 28875051), (28875267, 28886255), (28887051, 28887357)] 2021-10-25 09:33:51.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.052 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0301017': ['FBtr0330302']} 2021-10-25 09:33:51.052 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330302']] 2021-10-25 09:33:51.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267540: ['FBtr0346936'] 2021-10-25 09:33:51.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267540 has a single transcript. 2021-10-25 09:33:51.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267541: ['FBtr0346935'] 2021-10-25 09:33:51.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267541 has a single transcript. 2021-10-25 09:33:51.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267542: ['FBtr0346937'] 2021-10-25 09:33:51.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267542 has a single transcript. 2021-10-25 09:33:51.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039663: ['FBtr0085436', 'FBtr0334339'] 2021-10-25 09:33:51.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267543: ['FBtr0346939'] 2021-10-25 09:33:51.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267543 has a single transcript. 2021-10-25 09:33:51.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267544: ['FBtr0346938'] 2021-10-25 09:33:51.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267544 has a single transcript. 2021-10-25 09:33:51.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261266: ['FBtr0080316'] 2021-10-25 09:33:51.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261266 has a single transcript. 2021-10-25 09:33:51.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053207: ['FBtr0083162', 'FBtr0334025'] 2021-10-25 09:33:51.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267545: ['FBtr0346934'] 2021-10-25 09:33:51.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267545 has a single transcript. 2021-10-25 09:33:51.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267546: ['FBtr0346933'] 2021-10-25 09:33:51.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267546 has a single transcript. 2021-10-25 09:33:51.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261267: ['FBtr0302222'] 2021-10-25 09:33:51.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261267 has a single transcript. 2021-10-25 09:33:51.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027602: ['FBtr0074439', 'FBtr0074440', 'FBtr0340619'] 2021-10-25 09:33:51.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267547: ['FBtr0346932'] 2021-10-25 09:33:51.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267547 has a single transcript. 2021-10-25 09:33:51.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267548: ['FBtr0346931'] 2021-10-25 09:33:51.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267548 has a single transcript. 2021-10-25 09:33:51.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261268: ['FBtr0302156', 'FBtr0302157', 'FBtr0302158', 'FBtr0302159'] 2021-10-25 09:33:51.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19493382, 19493665), (19493957, 19494032), (19494498, 19494556), (19494498, 19494559), (19496869, 19496960), (19497089, 19497159)] 2021-10-25 09:33:51.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29486239, 29487139), (29487251, 29487304), (29488255, 29488306)] 2021-10-25 09:33:51.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032684: ['FBtr0081068', 'FBtr0305619'] 2021-10-25 09:33:51.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267549: ['FBtr0346930'] 2021-10-25 09:33:51.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267549 has a single transcript. 2021-10-25 09:33:51.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267550: ['FBtr0346929'] 2021-10-25 09:33:51.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267550 has a single transcript. 2021-10-25 09:33:51.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15666586, 15671764), (15672180, 15679135), (15679248, 15685069), (15685304, 15686595)] 2021-10-25 09:33:51.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036212: ['FBtr0076080', 'FBtr0110780', 'FBtr0302137'] 2021-10-25 09:33:51.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267551: ['FBtr0346928'] 2021-10-25 09:33:51.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267551 has a single transcript. 2021-10-25 09:33:51.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267552: ['FBtr0346927'] 2021-10-25 09:33:51.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267552 has a single transcript. 2021-10-25 09:33:51.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267553: ['FBtr0346926'] 2021-10-25 09:33:51.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267553 has a single transcript. 2021-10-25 09:33:51.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039664: ['FBtr0085425', 'FBtr0303455'] 2021-10-25 09:33:51.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267554: ['FBtr0346925'] 2021-10-25 09:33:51.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267554 has a single transcript. 2021-10-25 09:33:51.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17414642, 17414969), (17415159, 17419447), (17415159, 17415544), (17415844, 17419447), (17419875, 17419935), (17421920, 17421982), (17421923, 17421982)] 2021-10-25 09:33:51.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18509706, 18511622), (18509778, 18511622), (18511878, 18511938), (18512385, 18512447)] 2021-10-25 09:33:51.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267555: ['FBtr0346923', 'FBtr0346924'] 2021-10-25 09:33:51.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15266526, 15266595), (15266734, 15266795), (15267019, 15267144), (15267287, 15267352), (15267467, 15267529), (15267700, 15267762), (15267933, 15267995), (15268757, 15268820), (15269204, 15269373), (15269204, 15270904), (15271143, 15271833), (15271143, 15271322), (15271143, 15271202)] 2021-10-25 09:33:51.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11821482, 11821833), (11821719, 11821833), (11822092, 11822160), (11822092, 11822224)] 2021-10-25 09:33:51.225 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11820337, 11822092, 'FBtr0302137_exon_2') contains intron (11821482, 11821833) 2021-10-25 09:33:51.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302137_exon_2'] 2021-10-25 09:33:51.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.235 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:51.236 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.236 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16587467, 16587530), (16587471, 16587530)] 2021-10-25 09:33:51.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032685: ['FBtr0081069', 'FBtr0343824'] 2021-10-25 09:33:51.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053208: ['FBtr0082210', 'FBtr0082212', 'FBtr0082213', 'FBtr0082206', 'FBtr0082207', 'FBtr0082208', 'FBtr0082209', 'FBtr0273185', 'FBtr0347211', 'FBtr0347212', 'FBtr0347213', 'FBtr0347214', 'FBtr0306608', 'FBtr0306609'] 2021-10-25 09:33:51.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002069: ['FBtr0087784', 'FBtr0339391', 'FBtr0332882'] 2021-10-25 09:33:51.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039665: ['FBtr0085433', 'FBtr0085434'] 2021-10-25 09:33:51.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18518218, 18526865), (18527446, 18527513), (18528249, 18528505), (18528781, 18528840), (18529058, 18529125), (18530658, 18530727), (18531136, 18531204), (18531358, 18531419)] 2021-10-25 09:33:51.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027603: ['FBtr0074693'] 2021-10-25 09:33:51.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027603 has a single transcript. 2021-10-25 09:33:51.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267556: ['FBtr0346947'] 2021-10-25 09:33:51.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267556 has a single transcript. 2021-10-25 09:33:51.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027607: ['FBtr0088674'] 2021-10-25 09:33:51.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027607 has a single transcript. 2021-10-25 09:33:51.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267557: ['FBtr0346964'] 2021-10-25 09:33:51.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267557 has a single transcript. 2021-10-25 09:33:51.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267558: ['FBtr0346966'] 2021-10-25 09:33:51.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267558 has a single transcript. 2021-10-25 09:33:51.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036213: ['FBtr0076032', 'FBtr0345073'] 2021-10-25 09:33:51.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267559: ['FBtr0346969'] 2021-10-25 09:33:51.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267559 has a single transcript. 2021-10-25 09:33:51.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027608: ['FBtr0078675', 'FBtr0078676', 'FBtr0078674', 'FBtr0078672', 'FBtr0300906', 'FBtr0300907', 'FBtr0300909', 'FBtr0300910', 'FBtr0300911', 'FBtr0300912', 'FBtr0300913', 'FBtr0306153'] 2021-10-25 09:33:51.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29492109, 29492170), (29492238, 29492395), (29492751, 29493445), (29492751, 29493249)] 2021-10-25 09:33:51.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267560: ['FBtr0346974'] 2021-10-25 09:33:51.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267560 has a single transcript. 2021-10-25 09:33:51.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.340 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267561: ['FBtr0346971', 'FBtr0346970'] 2021-10-25 09:33:51.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032688: ['FBtr0081070', 'FBtr0343825', 'FBtr0343826'] 2021-10-25 09:33:51.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12877157, 12880167), (12880380, 12880769), (12880451, 12880769), (12880870, 12880949), (12881275, 12881507), (12882532, 12882741)] 2021-10-25 09:33:51.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261269: ['FBtr0339967', 'FBtr0087540'] 2021-10-25 09:33:51.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11822890, 11823199), (11823355, 11823657), (11823565, 11823657)] 2021-10-25 09:33:51.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:51.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039666: ['FBtr0085426'] 2021-10-25 09:33:51.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039666 has a single transcript. 2021-10-25 09:33:51.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039667: ['FBtr0085427', 'FBtr0085428', 'FBtr0333187'] 2021-10-25 09:33:51.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14271270, 14271337), (14271498, 14271558), (14271728, 14271787), (14272390, 14272442), (14273309, 14273364), (14273459, 14273528), (14274416, 14274478)] 2021-10-25 09:33:51.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18591367, 18591426), (18591553, 18591667), (18592118, 18592176), (18592335, 18592399), (18593170, 18593277), (18593170, 18593289), (18593413, 18593478), (18593586, 18593646), (18594189, 18595306)] 2021-10-25 09:33:51.436 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18593646, 18595429, 'FBtr0081070_exon_8') contains intron (18594189, 18595306) 2021-10-25 09:33:51.437 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18593646, 18595429, 'FBtr0343825_exon_8') contains intron (18594189, 18595306) 2021-10-25 09:33:51.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081070_exon_8', 'FBtr0343825_exon_8'] 2021-10-25 09:33:51.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036214: ['FBtr0076035', 'FBtr0332130'] 2021-10-25 09:33:51.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267562: ['FBtr0346976'] 2021-10-25 09:33:51.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267562 has a single transcript. 2021-10-25 09:33:51.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267563: ['FBtr0346975'] 2021-10-25 09:33:51.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267563 has a single transcript. 2021-10-25 09:33:51.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267564: ['FBtr0346972'] 2021-10-25 09:33:51.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267564 has a single transcript. 2021-10-25 09:33:51.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002121: ['FBtr0078166', 'FBtr0078167', 'FBtr0078168', 'FBtr0078169', 'FBtr0078170', 'FBtr0078171', 'FBtr0306589', 'FBtr0306590', 'FBtr0306591', 'FBtr0306592', 'FBtr0330655'] 2021-10-25 09:33:51.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11829189, 11829248), (11829560, 11829616)] 2021-10-25 09:33:51.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261270: ['FBtr0087564', 'FBtr0087565'] 2021-10-25 09:33:51.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267565: ['FBtr0346973'] 2021-10-25 09:33:51.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267565 has a single transcript. 2021-10-25 09:33:51.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267566: ['FBtr0346977'] 2021-10-25 09:33:51.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267566 has a single transcript. 2021-10-25 09:33:51.501 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29494885, 29495008), (29495125, 29495567), (29495801, 29496999), (29496773, 29496999), (29497324, 29497386), (29498005, 29498063), (29498231, 29498299), (29498503, 29498562)] 2021-10-25 09:33:51.502 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29494781, 29495125, 'FBtr0085427_exon_1') contains intron (29494885, 29495008) 2021-10-25 09:33:51.503 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085427_exon_1'] 2021-10-25 09:33:51.503 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267567: ['FBtr0346978'] 2021-10-25 09:33:51.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267567 has a single transcript. 2021-10-25 09:33:51.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267568: ['FBtr0346979'] 2021-10-25 09:33:51.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267568 has a single transcript. 2021-10-25 09:33:51.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267569: ['FBtr0346980'] 2021-10-25 09:33:51.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267569 has a single transcript. 2021-10-25 09:33:51.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14270174, 14270540)] 2021-10-25 09:33:51.531 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14268771, 14270658, 'FBtr0087564_exon_1') contains intron (14270174, 14270540) 2021-10-25 09:33:51.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087564_exon_1'] 2021-10-25 09:33:51.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267570: ['FBtr0346981'] 2021-10-25 09:33:51.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267570 has a single transcript. 2021-10-25 09:33:51.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032689: ['FBtr0081080', 'FBtr0343829'] 2021-10-25 09:33:51.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267571: ['FBtr0346982', 'FBtr0346983'] 2021-10-25 09:33:51.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036217: ['FBtr0076071'] 2021-10-25 09:33:51.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036217 has a single transcript. 2021-10-25 09:33:51.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18601051, 18601113), (18601293, 18601356), (18601548, 18601608), (18602876, 18603706), (18604050, 18604432), (18604567, 18604655)] 2021-10-25 09:33:51.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036218: ['FBtr0300721', 'FBtr0300722', 'FBtr0300724', 'FBtr0332127'] 2021-10-25 09:33:51.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10002440, 10002497), (10002694, 10002752), (10002853, 10002909), (10002987, 10003046), (10003251, 10003373), (10003650, 10004655), (10003650, 10004409), (10004442, 10004655), (10008636, 10008695), (10008854, 10009303), (10008854, 10014989), (10008854, 10009732), (10009372, 10009732), (10009649, 10009736), (10014826, 10014989), (10015105, 10015174), (10015105, 10015183), (10015595, 10015662), (10015926, 10016289), (10015926, 10018496), (10016826, 10017572), (10017839, 10018496), (10017839, 10018141), (10018210, 10018496), (10018558, 10018941), (10019435, 10019508), (10019641, 10019704), (10021383, 10027329), (10021383, 10021645), (10021383, 10021805), (10021383, 10025014), (10027381, 10041971), (10027381, 10037815), (10037890, 10041971), (10037890, 10042791), (10041998, 10042791)] 2021-10-25 09:33:51.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261274: ['FBtr0073217'] 2021-10-25 09:33:51.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261274 has a single transcript. 2021-10-25 09:33:51.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5758850, 5760160), (5760371, 5760629), (5760792, 5760848), (5760961, 5761236), (5760961, 5761645), (5760961, 5761437), (5761242, 5761645), (5761446, 5761645), (5761717, 5762171), (5762500, 5762556), (5762620, 5762704), (5762755, 5776951), (5762755, 5780863), (5762755, 5776924), (5762755, 5771629), (5777125, 5777589), (5777125, 5780863)] 2021-10-25 09:33:51.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:51.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.599 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.600 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.600 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.602 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261276: ['FBtr0087573', 'FBtr0087574', 'FBtr0339759', 'FBtr0339760', 'FBtr0339761'] 2021-10-25 09:33:51.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039668: ['FBtr0085430', 'FBtr0085432', 'FBtr0085429', 'FBtr0333188'] 2021-10-25 09:33:51.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032690: ['FBtr0081072'] 2021-10-25 09:33:51.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032690 has a single transcript. 2021-10-25 09:33:51.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032691: ['FBtr0081079'] 2021-10-25 09:33:51.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032691 has a single transcript. 2021-10-25 09:33:51.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032692: ['FBtr0081078'] 2021-10-25 09:33:51.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032692 has a single transcript. 2021-10-25 09:33:51.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032693: ['FBtr0081077'] 2021-10-25 09:33:51.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032693 has a single transcript. 2021-10-25 09:33:51.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267572: ['FBtr0346984', 'FBtr0346985', 'FBtr0346986'] 2021-10-25 09:33:51.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032694: ['FBtr0081073', 'FBtr0329971', 'FBtr0329972', 'FBtr0343808'] 2021-10-25 09:33:51.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11879139, 11879200), (11879455, 11879509), (11880163, 11880220), (11880676, 11880727)] 2021-10-25 09:33:51.679 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11879173, 11880163, 'FBtr0300721_exon_1') contains intron (11879455, 11879509) 2021-10-25 09:33:51.679 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11880220, 11881182, 'FBtr0300724_exon_3') contains intron (11880676, 11880727) 2021-10-25 09:33:51.680 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11879200, 11880163, 'FBtr0332127_exon_2') contains intron (11879455, 11879509) 2021-10-25 09:33:51.680 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11880220, 11881182, 'FBtr0332127_exon_3') contains intron (11880676, 11880727) 2021-10-25 09:33:51.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300721_exon_1', 'FBtr0300724_exon_3', 'FBtr0332127_exon_2', 'FBtr0332127_exon_3'] 2021-10-25 09:33:51.680 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29499315, 29499371), (29499992, 29500057), (29500258, 29500316), (29500498, 29500718), (29500513, 29500718), (29500893, 29500950), (29501488, 29501702), (29502273, 29502728)] 2021-10-25 09:33:51.715 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29499024, 29499992, 'FBtr0085430_exon_7') contains intron (29499315, 29499371) 2021-10-25 09:33:51.716 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29499024, 29499992, 'FBtr0085432_exon_7') contains intron (29499315, 29499371) 2021-10-25 09:33:51.716 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29499024, 29499992, 'FBtr0333188_exon_7') contains intron (29499315, 29499371) 2021-10-25 09:33:51.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085430_exon_7', 'FBtr0085432_exon_7', 'FBtr0333188_exon_7'] 2021-10-25 09:33:51.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14230838, 14230894), (14231099, 14231159), (14231244, 14231307), (14231426, 14231491), (14231964, 14232724), (14231964, 14232715), (14232903, 14232964), (14233129, 14233187), (14233561, 14233616), (14234206, 14234267), (14234342, 14234442), (14234342, 14234692), (14234559, 14234692), (14234828, 14234889), (14235187, 14235285)] 2021-10-25 09:33:51.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11344, 11409), (11344, 11778), (11518, 11778), (12221, 12285), (12928, 13519), (13625, 13682), (14874, 14932), (15711, 17052), (15711, 19879), (15711, 19884), (17212, 18260), (17212, 18025), (17212, 19879), (17212, 21135), (18168, 18260), (20015, 21065), (20015, 20830), (20015, 21135), (20020, 21135), (20020, 21065), (20973, 21065), (21200, 21348)] 2021-10-25 09:33:51.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18864568, 18865257), (18864568, 18864905), (18865127, 18865257)] 2021-10-25 09:33:51.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18858689, 18865127, 'FBtr0346985_exon_2') contains intron (18864568, 18864905) 2021-10-25 09:33:51.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21135, 21376, 'FBtr0078166_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18864905, 18866107, 'FBtr0346986_exon_1') contains intron (18865127, 18865257) 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14231491, 14232903, 'FBtr0339761_exon_8') contains intron (14231964, 14232724) 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346985_exon_2', 'FBtr0346986_exon_1'] 2021-10-25 09:33:51.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21065, 21376, 'FBtr0078167_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339761_exon_8'] 2021-10-25 09:33:51.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21065, 21376, 'FBtr0078168_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21135, 21376, 'FBtr0306589_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21135, 21376, 'FBtr0306590_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21065, 21376, 'FBtr0306591_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21065, 21376, 'FBtr0306592_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21065, 21376, 'FBtr0330655_exon_1') contains intron (21200, 21348) 2021-10-25 09:33:51.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078166_exon_1', 'FBtr0078167_exon_1', 'FBtr0078168_exon_1', 'FBtr0306589_exon_1', 'FBtr0306590_exon_1', 'FBtr0306591_exon_1', 'FBtr0306592_exon_1', 'FBtr0330655_exon_1'] 2021-10-25 09:33:51.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18617724, 18631742), (18617724, 18649597), (18631774, 18660208), (18631774, 18649597), (18649627, 18660208)] 2021-10-25 09:33:51.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.795 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081073': ['FBtr0329971']} 2021-10-25 09:33:51.795 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329971']] 2021-10-25 09:33:51.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036219: ['FBtr0076037'] 2021-10-25 09:33:51.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036219 has a single transcript. 2021-10-25 09:33:51.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036220: ['FBtr0302207'] 2021-10-25 09:33:51.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036220 has a single transcript. 2021-10-25 09:33:51.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036221: ['FBtr0076038', 'FBtr0332069'] 2021-10-25 09:33:51.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039669: ['FBtr0085440', 'FBtr0339902'] 2021-10-25 09:33:51.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267573: ['FBtr0346987'] 2021-10-25 09:33:51.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267573 has a single transcript. 2021-10-25 09:33:51.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267574: ['FBtr0346988'] 2021-10-25 09:33:51.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267574 has a single transcript. 2021-10-25 09:33:51.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267575: ['FBtr0346989'] 2021-10-25 09:33:51.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267575 has a single transcript. 2021-10-25 09:33:51.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032698: ['FBtr0081095', 'FBtr0273194'] 2021-10-25 09:33:51.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267576: ['FBtr0346990'] 2021-10-25 09:33:51.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267576 has a single transcript. 2021-10-25 09:33:51.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267577: ['FBtr0346991'] 2021-10-25 09:33:51.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267577 has a single transcript. 2021-10-25 09:33:51.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:51.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29515785, 29515843)] 2021-10-25 09:33:51.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267578: ['FBtr0346992'] 2021-10-25 09:33:51.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267578 has a single transcript. 2021-10-25 09:33:51.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267579: ['FBtr0346993', 'FBtr0346994'] 2021-10-25 09:33:51.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18689710, 18689776)] 2021-10-25 09:33:51.936 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18689690, 18690906, 'FBtr0081095_exon_1') contains intron (18689710, 18689776) 2021-10-25 09:33:51.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081095_exon_1'] 2021-10-25 09:33:51.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:51.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:51.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:51.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261277: ['FBtr0346379', 'FBtr0073470', 'FBtr0331742', 'FBtr0331743'] 2021-10-25 09:33:51.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039670: ['FBtr0085472'] 2021-10-25 09:33:51.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039670 has a single transcript. 2021-10-25 09:33:51.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036222: ['FBtr0076069'] 2021-10-25 09:33:51.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036222 has a single transcript. 2021-10-25 09:33:51.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039671: ['FBtr0085471', 'FBtr0339895'] 2021-10-25 09:33:51.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036224: ['FBtr0076040', 'FBtr0346545'] 2021-10-25 09:33:51.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032699: ['FBtr0089628', 'FBtr0343117'] 2021-10-25 09:33:52.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267580: ['FBtr0346995'] 2021-10-25 09:33:52.025 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267580 has a single transcript. 2021-10-25 09:33:52.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:52.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11942721, 11942793)] 2021-10-25 09:33:52.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18692180, 18692244), (18692908, 18692968), (18693515, 18695044)] 2021-10-25 09:33:52.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267581: ['FBtr0346997'] 2021-10-25 09:33:52.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267581 has a single transcript. 2021-10-25 09:33:52.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267582: ['FBtr0346996'] 2021-10-25 09:33:52.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267582 has a single transcript. 2021-10-25 09:33:52.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11153360, 11153487), (11153360, 11153616), (11153705, 11153787), (11153827, 11153892)] 2021-10-25 09:33:52.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11153616, 11153827, 'FBtr0346379_exon_2') contains intron (11153705, 11153787) 2021-10-25 09:33:52.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11153616, 11153802, 'FBtr0073470_exon_1') contains intron (11153705, 11153787) 2021-10-25 09:33:52.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346379_exon_2', 'FBtr0073470_exon_1'] 2021-10-25 09:33:52.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267585: ['FBtr0347015', 'FBtr0347016'] 2021-10-25 09:33:52.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032700: ['FBtr0081096', 'FBtr0343108'] 2021-10-25 09:33:52.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036225: ['FBtr0076067'] 2021-10-25 09:33:52.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036225 has a single transcript. 2021-10-25 09:33:52.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039673: ['FBtr0330294', 'FBtr0330295'] 2021-10-25 09:33:52.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036226: ['FBtr0076041'] 2021-10-25 09:33:52.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036226 has a single transcript. 2021-10-25 09:33:52.104 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4622048, 4622106)] 2021-10-25 09:33:52.104 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4621117, 4622481, 'FBtr0347015_exon_1') contains intron (4622048, 4622106) 2021-10-25 09:33:52.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347015_exon_1'] 2021-10-25 09:33:52.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027609: ['FBtr0077457'] 2021-10-25 09:33:52.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027609 has a single transcript. 2021-10-25 09:33:52.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036227: ['FBtr0076042'] 2021-10-25 09:33:52.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036227 has a single transcript. 2021-10-25 09:33:52.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036228: ['FBtr0076066'] 2021-10-25 09:33:52.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036228 has a single transcript. 2021-10-25 09:33:52.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027610: ['FBtr0082747', 'FBtr0082748', 'FBtr0346113'] 2021-10-25 09:33:52.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18696208, 18696567), (18697358, 18697420), (18697754, 18697823)] 2021-10-25 09:33:52.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036229: ['FBtr0076043'] 2021-10-25 09:33:52.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036229 has a single transcript. 2021-10-25 09:33:52.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29599801, 29599853), (29600636, 29600687), (29600763, 29600822)] 2021-10-25 09:33:52.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.135 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036230: ['FBtr0076065', 'FBtr0306793'] 2021-10-25 09:33:52.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267586: ['FBtr0347017'] 2021-10-25 09:33:52.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267586 has a single transcript. 2021-10-25 09:33:52.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267587: ['FBtr0347018'] 2021-10-25 09:33:52.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267587 has a single transcript. 2021-10-25 09:33:52.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267588: ['FBtr0347019', 'FBtr0347020'] 2021-10-25 09:33:52.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032701: ['FBtr0081097', 'FBtr0343109'] 2021-10-25 09:33:52.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13365229, 13367738), (13367668, 13367738), (13368161, 13368251)] 2021-10-25 09:33:52.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039674: ['FBtr0085447'] 2021-10-25 09:33:52.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039674 has a single transcript. 2021-10-25 09:33:52.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11957518, 11957579), (11957662, 11957723)] 2021-10-25 09:33:52.196 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039675: ['FBtr0085448', 'FBtr0332440'] 2021-10-25 09:33:52.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261278: ['FBtr0080885', 'FBtr0080884', 'FBtr0080886', 'FBtr0100459', 'FBtr0339514'] 2021-10-25 09:33:52.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23905755, 23905818), (23905760, 23905818)] 2021-10-25 09:33:52.227 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.227 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002174: ['FBtr0089503', 'FBtr0089504', 'FBtr0089505', 'FBtr0344995', 'FBtr0306253'] 2021-10-25 09:33:52.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18698976, 18699038), (18698976, 18699035)] 2021-10-25 09:33:52.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053213: ['FBtr0085271'] 2021-10-25 09:33:52.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053213 has a single transcript. 2021-10-25 09:33:52.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29664987, 29665041), (29664996, 29665056), (29665591, 29665659), (29666065, 29666118), (29666172, 29666229), (29666365, 29666429), (29666542, 29666598)] 2021-10-25 09:33:52.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036232: ['FBtr0076044', 'FBtr0310535'] 2021-10-25 09:33:52.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053217: ['FBtr0070045'] 2021-10-25 09:33:52.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053217 has a single transcript. 2021-10-25 09:33:52.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053218: ['FBtr0308931', 'FBtr0308932'] 2021-10-25 09:33:52.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027611: ['FBtr0080030', 'FBtr0080031'] 2021-10-25 09:33:52.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267589: ['FBtr0347021'] 2021-10-25 09:33:52.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11974928, 11974995), (11974928, 11974974)] 2021-10-25 09:33:52.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267589 has a single transcript. 2021-10-25 09:33:52.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032702: ['FBtr0081128'] 2021-10-25 09:33:52.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032702 has a single transcript. 2021-10-25 09:33:52.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2330355, 2330412), (2330355, 2330505)] 2021-10-25 09:33:52.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267590: ['FBtr0347022'] 2021-10-25 09:33:52.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267590 has a single transcript. 2021-10-25 09:33:52.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032703: ['FBtr0081098'] 2021-10-25 09:33:52.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032703 has a single transcript. 2021-10-25 09:33:52.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039676: ['FBtr0085466', 'FBtr0332442', 'FBtr0332443'] 2021-10-25 09:33:52.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267591: ['FBtr0347023'] 2021-10-25 09:33:52.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267591 has a single transcript. 2021-10-25 09:33:52.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032704: ['FBtr0343116'] 2021-10-25 09:33:52.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032704 has a single transcript. 2021-10-25 09:33:52.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267592: ['FBtr0347413'] 2021-10-25 09:33:52.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267592 has a single transcript. 2021-10-25 09:33:52.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16680276, 16684497), (16680276, 16690901), (16684607, 16690901), (16685941, 16690901), (16691192, 16696584), (16691192, 16691900), (16692124, 16696584), (16695676, 16696584), (16696762, 16697500), (16697643, 16698138), (16698348, 16698961)] 2021-10-25 09:33:52.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032705: ['FBtr0081099'] 2021-10-25 09:33:52.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032705 has a single transcript. 2021-10-25 09:33:52.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10457962, 10458447), (10458818, 10458879), (10459085, 10459143), (10459280, 10459661), (10459280, 10459383), (10459517, 10459879), (10459795, 10459879), (10460520, 10460580), (10460801, 10460868), (10461280, 10461342), (10461785, 10461843)] 2021-10-25 09:33:52.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267593: ['FBtr0347032'] 2021-10-25 09:33:52.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267593 has a single transcript. 2021-10-25 09:33:52.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032706: ['FBtr0081125', 'FBtr0343113', 'FBtr0343114'] 2021-10-25 09:33:52.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036235: ['FBtr0290131', 'FBtr0330171'] 2021-10-25 09:33:52.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23708474, 23708634), (23708474, 23708629), (23708487, 23708634), (23708487, 23708629)] 2021-10-25 09:33:52.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267594: ['FBtr0347033'] 2021-10-25 09:33:52.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267594 has a single transcript. 2021-10-25 09:33:52.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053221: ['FBtr0305348'] 2021-10-25 09:33:52.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053221 has a single transcript. 2021-10-25 09:33:52.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267595: ['FBtr0347034'] 2021-10-25 09:33:52.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267595 has a single transcript. 2021-10-25 09:33:52.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267596: ['FBtr0347035'] 2021-10-25 09:33:52.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267596 has a single transcript. 2021-10-25 09:33:52.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053222: ['FBtr0300634', 'FBtr0300652'] 2021-10-25 09:33:52.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267597: ['FBtr0347042'] 2021-10-25 09:33:52.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267597 has a single transcript. 2021-10-25 09:33:52.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29667085, 29667134), (29667241, 29667303), (29667448, 29667506), (29667554, 29667639), (29667925, 29667971), (29667940, 29667989), (29668644, 29668710)] 2021-10-25 09:33:52.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29667971, 29668877, 'FBtr0085466_exon_1') contains intron (29668644, 29668710) 2021-10-25 09:33:52.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085466_exon_1'] 2021-10-25 09:33:52.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267598: ['FBtr0347043'] 2021-10-25 09:33:52.389 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267598 has a single transcript. 2021-10-25 09:33:52.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11985272, 11985945), (11986151, 11986217), (11986399, 11986458), (11987409, 11987467), (11987613, 11987684), (11988265, 11988321), (11988539, 11988597), (11988762, 11988830), (11989184, 11989246), (11989346, 11989412), (11989809, 11989865), (11989956, 11990017)] 2021-10-25 09:33:52.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267599: ['FBtr0347044'] 2021-10-25 09:33:52.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267599 has a single transcript. 2021-10-25 09:33:52.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027615: ['FBtr0076271', 'FBtr0076272'] 2021-10-25 09:33:52.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267600: ['FBtr0347046'] 2021-10-25 09:33:52.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267600 has a single transcript. 2021-10-25 09:33:52.408 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0290131': ['FBtr0330171']} 2021-10-25 09:33:52.408 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330171']] 2021-10-25 09:33:52.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036236: ['FBtr0076048'] 2021-10-25 09:33:52.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036236 has a single transcript. 2021-10-25 09:33:52.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7898926, 7899125), (7898926, 7901242)] 2021-10-25 09:33:52.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267601: ['FBtr0347047'] 2021-10-25 09:33:52.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267601 has a single transcript. 2021-10-25 09:33:52.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18711733, 18712003), (18712110, 18712188), (18712584, 18712951), (18713150, 18713305), (18713162, 18713305)] 2021-10-25 09:33:52.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267602: ['FBtr0347048'] 2021-10-25 09:33:52.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267602 has a single transcript. 2021-10-25 09:33:52.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036237: ['FBtr0076062'] 2021-10-25 09:33:52.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036237 has a single transcript. 2021-10-25 09:33:52.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267603: ['FBtr0347049'] 2021-10-25 09:33:52.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267603 has a single transcript. 2021-10-25 09:33:52.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036239: ['FBtr0076060', 'FBtr0076058', 'FBtr0076059', 'FBtr0300272', 'FBtr0344758'] 2021-10-25 09:33:52.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267604: ['FBtr0347050'] 2021-10-25 09:33:52.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267604 has a single transcript. 2021-10-25 09:33:52.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10884659, 10884733), (10885790, 10885901), (10886173, 10886383)] 2021-10-25 09:33:52.449 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267605: ['FBtr0347051'] 2021-10-25 09:33:52.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267605 has a single transcript. 2021-10-25 09:33:52.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267606: ['FBtr0347052'] 2021-10-25 09:33:52.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267606 has a single transcript. 2021-10-25 09:33:52.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267607: ['FBtr0347053'] 2021-10-25 09:33:52.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267607 has a single transcript. 2021-10-25 09:33:52.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267608: ['FBtr0347038'] 2021-10-25 09:33:52.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267608 has a single transcript. 2021-10-25 09:33:52.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053223: ['FBtr0071239', 'FBtr0343354'] 2021-10-25 09:33:52.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267609: ['FBtr0347037'] 2021-10-25 09:33:52.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267609 has a single transcript. 2021-10-25 09:33:52.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039677: ['FBtr0085449', 'FBtr0332441'] 2021-10-25 09:33:52.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267610: ['FBtr0347039'] 2021-10-25 09:33:52.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267610 has a single transcript. 2021-10-25 09:33:52.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267611: ['FBtr0347040'] 2021-10-25 09:33:52.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267611 has a single transcript. 2021-10-25 09:33:52.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027616: ['FBtr0073078', 'FBtr0073079'] 2021-10-25 09:33:52.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267612: ['FBtr0347041'] 2021-10-25 09:33:52.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267612 has a single transcript. 2021-10-25 09:33:52.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261279: ['FBtr0299515', 'FBtr0299516'] 2021-10-25 09:33:52.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267613: ['FBtr0347054'] 2021-10-25 09:33:52.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267613 has a single transcript. 2021-10-25 09:33:52.524 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8466503, 8483585)] 2021-10-25 09:33:52.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267614: ['FBtr0347571'] 2021-10-25 09:33:52.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267614 has a single transcript. 2021-10-25 09:33:52.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29669273, 29669377), (29669942, 29670006), (29670156, 29670209), (29670408, 29670470), (29670707, 29670765), (29671248, 29671349)] 2021-10-25 09:33:52.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032707: ['FBtr0343112', 'FBtr0301647'] 2021-10-25 09:33:52.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267615: ['FBtr0347056'] 2021-10-25 09:33:52.532 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267615 has a single transcript. 2021-10-25 09:33:52.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267616: ['FBtr0347057'] 2021-10-25 09:33:52.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267616 has a single transcript. 2021-10-25 09:33:52.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002183: ['FBtr0072865', 'FBtr0072864'] 2021-10-25 09:33:52.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11998996, 12000272), (12000690, 12000749), (12001090, 12001726), (12001090, 12002585), (12001865, 12002585), (12001931, 12002585)] 2021-10-25 09:33:52.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.547 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3372850, 3372969), (3373869, 3374018), (3373869, 3374132)] 2021-10-25 09:33:52.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.548 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267617: ['FBtr0347058'] 2021-10-25 09:33:52.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267617 has a single transcript. 2021-10-25 09:33:52.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267618: ['FBtr0347059'] 2021-10-25 09:33:52.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267618 has a single transcript. 2021-10-25 09:33:52.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22411637, 22412648), (22412850, 22412909), (22413279, 22413360), (22413457, 22413519), (22414277, 22414542), (22414277, 22418108)] 2021-10-25 09:33:52.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267619: ['FBtr0347070'] 2021-10-25 09:33:52.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267619 has a single transcript. 2021-10-25 09:33:52.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18716702, 18730896)] 2021-10-25 09:33:52.572 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.572 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267620: ['FBtr0347071'] 2021-10-25 09:33:52.573 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267620 has a single transcript. 2021-10-25 09:33:52.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267621: ['FBtr0347072'] 2021-10-25 09:33:52.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053225: ['FBtr0300405', 'FBtr0342899'] 2021-10-25 09:33:52.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267621 has a single transcript. 2021-10-25 09:33:52.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1871917, 1872581), (1871917, 1872353), (1872470, 1872581), (1872735, 1872799), (1873062, 1873116), (1873983, 1874040), (1875218, 1875286), (1875586, 1875651), (1875915, 1876109)] 2021-10-25 09:33:52.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267622: ['FBtr0347073'] 2021-10-25 09:33:52.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267622 has a single transcript. 2021-10-25 09:33:52.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039678: ['FBtr0085450', 'FBtr0339147'] 2021-10-25 09:33:52.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267623: ['FBtr0347074'] 2021-10-25 09:33:52.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267623 has a single transcript. 2021-10-25 09:33:52.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027617: ['FBtr0084738'] 2021-10-25 09:33:52.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027617 has a single transcript. 2021-10-25 09:33:52.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267624: ['FBtr0347077'] 2021-10-25 09:33:52.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267624 has a single transcript. 2021-10-25 09:33:52.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027619: ['FBtr0088387', 'FBtr0339425'] 2021-10-25 09:33:52.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267625: ['FBtr0347075'] 2021-10-25 09:33:52.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267625 has a single transcript. 2021-10-25 09:33:52.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267626: ['FBtr0347076'] 2021-10-25 09:33:52.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267626 has a single transcript. 2021-10-25 09:33:52.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261283: ['FBtr0074873', 'FBtr0074874', 'FBtr0074875', 'FBtr0333877'] 2021-10-25 09:33:52.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267627: ['FBtr0347078'] 2021-10-25 09:33:52.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267627 has a single transcript. 2021-10-25 09:33:52.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032709: ['FBtr0081101'] 2021-10-25 09:33:52.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032709 has a single transcript. 2021-10-25 09:33:52.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267628: ['FBtr0347079'] 2021-10-25 09:33:52.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267628 has a single transcript. 2021-10-25 09:33:52.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032713: ['FBtr0081104', 'FBtr0343833', 'FBtr0308574', 'FBtr0308575'] 2021-10-25 09:33:52.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267629: ['FBtr0347080'] 2021-10-25 09:33:52.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267629 has a single transcript. 2021-10-25 09:33:52.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21590390, 21590452), (21590669, 21590730), (21590773, 21590830), (21591000, 21591056)] 2021-10-25 09:33:52.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29671754, 29671822)] 2021-10-25 09:33:52.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267630: ['FBtr0347085'] 2021-10-25 09:33:52.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267630 has a single transcript. 2021-10-25 09:33:52.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002283: ['FBtr0307336', 'FBtr0075311'] 2021-10-25 09:33:52.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267631: ['FBtr0347084'] 2021-10-25 09:33:52.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267631 has a single transcript. 2021-10-25 09:33:52.677 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9969235, 9969460), (9969552, 9969740), (9969854, 9969918), (9970207, 9970271), (9970408, 9970473)] 2021-10-25 09:33:52.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267632: ['FBtr0347086'] 2021-10-25 09:33:52.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267632 has a single transcript. 2021-10-25 09:33:52.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267633: ['FBtr0347088'] 2021-10-25 09:33:52.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267633 has a single transcript. 2021-10-25 09:33:52.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267634: ['FBtr0347087'] 2021-10-25 09:33:52.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267634 has a single transcript. 2021-10-25 09:33:52.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16588957, 16589019), (16589172, 16589246), (16589530, 16589648)] 2021-10-25 09:33:52.704 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.704 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053229: ['FBtr0072499', 'FBtr0345592'] 2021-10-25 09:33:52.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039679: ['FBtr0085451'] 2021-10-25 09:33:52.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039679 has a single transcript. 2021-10-25 09:33:52.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267635: ['FBtr0347089', 'FBtr0347090'] 2021-10-25 09:33:52.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039680: ['FBtr0085452'] 2021-10-25 09:33:52.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039680 has a single transcript. 2021-10-25 09:33:52.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19794159, 19794673), (19794159, 19794898), (19794159, 19794223), (19794159, 19794563), (19794325, 19794898), (19794699, 19794901), (19796392, 19796452), (19797258, 19797327), (19797719, 19797779), (19797906, 19798132), (19798300, 19798373)] 2021-10-25 09:33:52.726 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039681: ['FBtr0085464', 'FBtr0308238'] 2021-10-25 09:33:52.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027620: ['FBtr0085845'] 2021-10-25 09:33:52.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027620 has a single transcript. 2021-10-25 09:33:52.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18823602, 18824299), (18823619, 18824299), (18823680, 18824299), (18823743, 18824299), (18824581, 18824796), (18825167, 18825233), (18825872, 18825929)] 2021-10-25 09:33:52.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027621: ['FBtr0074718', 'FBtr0074719', 'FBtr0074720', 'FBtr0074713', 'FBtr0074714', 'FBtr0074715', 'FBtr0074716', 'FBtr0074717', 'FBtr0307192', 'FBtr0307193', 'FBtr0307194', 'FBtr0339439', 'FBtr0339440'] 2021-10-25 09:33:52.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:52.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036240: ['FBtr0076049', 'FBtr0076050', 'FBtr0332709', 'FBtr0332710'] 2021-10-25 09:33:52.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20405658, 20406525)] 2021-10-25 09:33:52.758 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20404269, 20407558, 'FBtr0347089_exon_1') contains intron (20405658, 20406525) 2021-10-25 09:33:52.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347089_exon_1'] 2021-10-25 09:33:52.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002284: ['FBtr0075360'] 2021-10-25 09:33:52.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002284 has a single transcript. 2021-10-25 09:33:52.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29680816, 29680873), (29681064, 29681126), (29681296, 29681845), (29681296, 29682236)] 2021-10-25 09:33:52.774 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29680240, 29681064, 'FBtr0085464_exon_3') contains intron (29680816, 29680873) 2021-10-25 09:33:52.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085464_exon_3'] 2021-10-25 09:33:52.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002306: ['FBtr0081570', 'FBtr0081571', 'FBtr0334884', 'FBtr0334885'] 2021-10-25 09:33:52.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267636: ['FBtr0347091'] 2021-10-25 09:33:52.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267636 has a single transcript. 2021-10-25 09:33:52.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053230: ['FBtr0072757'] 2021-10-25 09:33:52.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053230 has a single transcript. 2021-10-25 09:33:52.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267637: ['FBtr0347092'] 2021-10-25 09:33:52.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267637 has a single transcript. 2021-10-25 09:33:52.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053233: ['FBtr0273190', 'FBtr0301038'] 2021-10-25 09:33:52.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267638: ['FBtr0347093'] 2021-10-25 09:33:52.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267638 has a single transcript. 2021-10-25 09:33:52.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039682: ['FBtr0085463', 'FBtr0333199'] 2021-10-25 09:33:52.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267639: ['FBtr0347094'] 2021-10-25 09:33:52.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267639 has a single transcript. 2021-10-25 09:33:52.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12003294, 12005253), (12004545, 12005253), (12005858, 12005916), (12006192, 12006493), (12007166, 12007220), (12007400, 12007615), (12007400, 12007493)] 2021-10-25 09:33:52.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267640: ['FBtr0347095'] 2021-10-25 09:33:52.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267640 has a single transcript. 2021-10-25 09:33:52.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267641: ['FBtr0347096'] 2021-10-25 09:33:52.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267641 has a single transcript. 2021-10-25 09:33:52.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267642: ['FBtr0347097'] 2021-10-25 09:33:52.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267642 has a single transcript. 2021-10-25 09:33:52.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261284: ['FBtr0071004'] 2021-10-25 09:33:52.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261284 has a single transcript. 2021-10-25 09:33:52.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2659748, 2659806), (2660131, 2660193), (2660700, 2660768), (2661319, 2661382)] 2021-10-25 09:33:52.868 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2659806, 2660745, 'FBtr0301038_exon_2') contains intron (2660131, 2660193) 2021-10-25 09:33:52.868 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301038_exon_2'] 2021-10-25 09:33:52.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267643: ['FBtr0347100'] 2021-10-25 09:33:52.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267643 has a single transcript. 2021-10-25 09:33:52.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29686212, 29686681), (29686212, 29689222)] 2021-10-25 09:33:52.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267644: ['FBtr0347099'] 2021-10-25 09:33:52.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267644 has a single transcript. 2021-10-25 09:33:52.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7162843, 7164431), (7163040, 7164121), (7163040, 7164428), (7164355, 7164428), (7164359, 7164428), (7164860, 7174110), (7175396, 7178209), (7178495, 7178703), (7179336, 7179398), (7179641, 7181556), (7179641, 7180013), (7181048, 7181556), (7182582, 7182810), (7183035, 7183103)] 2021-10-25 09:33:52.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261285: ['FBtr0083752', 'FBtr0330044', 'FBtr0347007'] 2021-10-25 09:33:52.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032715: ['FBtr0081121', 'FBtr0344795'] 2021-10-25 09:33:52.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267645: ['FBtr0347101'] 2021-10-25 09:33:52.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267645 has a single transcript. 2021-10-25 09:33:52.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267646: ['FBtr0347102'] 2021-10-25 09:33:52.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267646 has a single transcript. 2021-10-25 09:33:52.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267647: ['FBtr0347103'] 2021-10-25 09:33:52.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267647 has a single transcript. 2021-10-25 09:33:52.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267648: ['FBtr0347111', 'FBtr0433521'] 2021-10-25 09:33:52.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053234: ['FBtr0290142', 'FBtr0345013'] 2021-10-25 09:33:52.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18829736, 18829886), (18830077, 18830136), (18830460, 18830539), (18830757, 18830853)] 2021-10-25 09:33:52.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039683: ['FBtr0085454'] 2021-10-25 09:33:52.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039683 has a single transcript. 2021-10-25 09:33:52.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039684: ['FBtr0085455'] 2021-10-25 09:33:52.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039684 has a single transcript. 2021-10-25 09:33:52.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19141643, 19141880), (19142018, 19142087), (19142273, 19145480), (19145924, 19147134)] 2021-10-25 09:33:52.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039685: ['FBtr0085462', 'FBtr0333198'] 2021-10-25 09:33:52.962 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083752': ['FBtr0330044']} 2021-10-25 09:33:52.963 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330044']] 2021-10-25 09:33:52.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21354694, 21354973), (21356251, 21356317), (21356704, 21356810), (21357364, 21357475), (21357758, 21358004)] 2021-10-25 09:33:52.965 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21354973, 21356704, 'FBtr0433521_exon_3') contains intron (21356251, 21356317) 2021-10-25 09:33:52.965 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21356810, 21357758, 'FBtr0433521_exon_2') contains intron (21357364, 21357475) 2021-10-25 09:33:52.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433521_exon_3', 'FBtr0433521_exon_2'] 2021-10-25 09:33:52.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2661705, 2661760), (2662085, 2662152), (2662274, 2662327), (2662586, 2662646), (2662748, 2662818), (2662939, 2662995), (2663270, 2663328), (2663456, 2663515), (2663456, 2663521)] 2021-10-25 09:33:52.981 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:52.981 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:52.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036242: ['FBtr0076051'] 2021-10-25 09:33:52.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036242 has a single transcript. 2021-10-25 09:33:52.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036246: ['FBtr0075990'] 2021-10-25 09:33:52.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036246 has a single transcript. 2021-10-25 09:33:52.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032717: ['FBtr0331194', 'FBtr0081120', 'FBtr0273228'] 2021-10-25 09:33:53.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29716819, 29716876)] 2021-10-25 09:33:53.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036248: ['FBtr0075992'] 2021-10-25 09:33:53.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036248 has a single transcript. 2021-10-25 09:33:53.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261286: ['FBtr0083275'] 2021-10-25 09:33:53.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261286 has a single transcript. 2021-10-25 09:33:53.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036249: ['FBtr0075993', 'FBtr0347572'] 2021-10-25 09:33:53.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261287: ['FBtr0084894', 'FBtr0084895', 'FBtr0344091', 'FBtr0344092'] 2021-10-25 09:33:53.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002354: ['FBtr0082703'] 2021-10-25 09:33:53.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002354 has a single transcript. 2021-10-25 09:33:53.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267649: ['FBtr0347110', 'FBtr0433520'] 2021-10-25 09:33:53.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053236: ['FBtr0300085'] 2021-10-25 09:33:53.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053236 has a single transcript. 2021-10-25 09:33:53.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053237: ['FBtr0300086'] 2021-10-25 09:33:53.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053237 has a single transcript. 2021-10-25 09:33:53.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19495551, 19506485), (19496787, 19505766), (19496787, 19506482), (19496787, 19506485), (19498880, 19506482), (19498880, 19506485), (19504537, 19506485), (19504537, 19506482), (19505846, 19506482), (19506078, 19506485), (19506237, 19506482), (19506237, 19506292), (19506241, 19506482)] 2021-10-25 09:33:53.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002413: ['FBtr0085742', 'FBtr0085743', 'FBtr0085744', 'FBtr0334548'] 2021-10-25 09:33:53.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053238: ['FBtr0300087'] 2021-10-25 09:33:53.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053238 has a single transcript. 2021-10-25 09:33:53.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039686: ['FBtr0085456'] 2021-10-25 09:33:53.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039686 has a single transcript. 2021-10-25 09:33:53.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18836089, 18836153), (18836444, 18836518), (18836658, 18836721), (18836861, 18836915), (18837056, 18837126), (18838158, 18838508), (18838792, 18838882), (18838795, 18838882), (18839455, 18839523)] 2021-10-25 09:33:53.056 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18838882, 18839679, 'FBtr0081120_exon_1') contains intron (18839455, 18839523) 2021-10-25 09:33:53.056 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18838508, 18839679, 'FBtr0273228_exon_1') contains intron (18838792, 18838882) 2021-10-25 09:33:53.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081120_exon_1', 'FBtr0273228_exon_1'] 2021-10-25 09:33:53.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053239: ['FBtr0300088'] 2021-10-25 09:33:53.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053239 has a single transcript. 2021-10-25 09:33:53.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12120588, 12120642), (12120588, 12120654)] 2021-10-25 09:33:53.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039687: ['FBtr0085461'] 2021-10-25 09:33:53.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039687 has a single transcript. 2021-10-25 09:33:53.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053240: ['FBtr0300089'] 2021-10-25 09:33:53.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053240 has a single transcript. 2021-10-25 09:33:53.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053241: ['FBtr0300090'] 2021-10-25 09:33:53.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053241 has a single transcript. 2021-10-25 09:33:53.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039688: ['FBtr0085460', 'FBtr0339717', 'FBtr0339718'] 2021-10-25 09:33:53.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053242: ['FBtr0300091'] 2021-10-25 09:33:53.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053242 has a single transcript. 2021-10-25 09:33:53.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21354694, 21354973), (21356251, 21356317), (21356704, 21356810), (21357758, 21358004), (21358596, 21358791)] 2021-10-25 09:33:53.086 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21354973, 21356704, 'FBtr0433520_exon_3') contains intron (21356251, 21356317) 2021-10-25 09:33:53.086 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21358004, 21359768, 'FBtr0433520_exon_1') contains intron (21358596, 21358791) 2021-10-25 09:33:53.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433520_exon_3', 'FBtr0433520_exon_1'] 2021-10-25 09:33:53.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053243: ['FBtr0300092'] 2021-10-25 09:33:53.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053243 has a single transcript. 2021-10-25 09:33:53.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053244: ['FBtr0300093'] 2021-10-25 09:33:53.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053244 has a single transcript. 2021-10-25 09:33:53.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053245: ['FBtr0300094'] 2021-10-25 09:33:53.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053245 has a single transcript. 2021-10-25 09:33:53.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036250: ['FBtr0076026'] 2021-10-25 09:33:53.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036250 has a single transcript. 2021-10-25 09:33:53.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053246: ['FBtr0300095'] 2021-10-25 09:33:53.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053246 has a single transcript. 2021-10-25 09:33:53.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036254: ['FBtr0076024'] 2021-10-25 09:33:53.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036254 has a single transcript. 2021-10-25 09:33:53.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053247: ['FBtr0300096'] 2021-10-25 09:33:53.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053247 has a single transcript. 2021-10-25 09:33:53.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25591763, 25591817), (25592110, 25592582), (25592291, 25592582), (25592291, 25592353), (25592376, 25592582), (25592658, 25592720), (25592885, 25608727), (25593081, 25593134), (25593365, 25593452), (25593531, 25593585), (25593750, 25608727), (25608798, 25608864), (25608904, 25608968)] 2021-10-25 09:33:53.122 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036255: ['FBtr0300011'] 2021-10-25 09:33:53.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036255 has a single transcript. 2021-10-25 09:33:53.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053252: ['FBtr0074346'] 2021-10-25 09:33:53.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053252 has a single transcript. 2021-10-25 09:33:53.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036257: ['FBtr0075997', 'FBtr0334091', 'FBtr0334092', 'FBtr0334093'] 2021-10-25 09:33:53.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053255: ['FBtr0347036'] 2021-10-25 09:33:53.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053255 has a single transcript. 2021-10-25 09:33:53.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29725931, 29726814), (29725931, 29726860), (29727130, 29727401), (29727585, 29727655), (29728049, 29728104), (29729122, 29729298), (29729552, 29729614), (29730333, 29730395), (29730561, 29730890), (29730561, 29730634), (29730707, 29730890)] 2021-10-25 09:33:53.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053257: ['FBtr0075378'] 2021-10-25 09:33:53.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053257 has a single transcript. 2021-10-25 09:33:53.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31057928, 31058539), (31058627, 31060374), (31058642, 31061076), (31060464, 31061076), (31060464, 31061069)] 2021-10-25 09:33:53.144 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31060374, 31061210, 'FBtr0085744_exon_1') contains intron (31060464, 31061076) 2021-10-25 09:33:53.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085744_exon_1'] 2021-10-25 09:33:53.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267650: ['FBtr0347108', 'FBtr0433530'] 2021-10-25 09:33:53.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053258: ['FBtr0301030', 'FBtr0346790'] 2021-10-25 09:33:53.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032719: ['FBtr0081110', 'FBtr0342919'] 2021-10-25 09:33:53.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21372067, 21372141), (21373080, 21373297)] 2021-10-25 09:33:53.192 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21370917, 21373575, 'FBtr0433530_exon_1') contains intron (21372067, 21372141) 2021-10-25 09:33:53.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433530_exon_1'] 2021-10-25 09:33:53.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.194 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16082724, 16082778), (16083089, 16083159)] 2021-10-25 09:33:53.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18845362, 18852953), (18845921, 18852953), (18853456, 18853536), (18853731, 18853793), (18853925, 18853991), (18854247, 18854310)] 2021-10-25 09:33:53.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12138951, 12139962), (12139101, 12139962), (12140128, 12141139), (12140128, 12141251), (12141171, 12141251), (12141377, 12141440), (12141377, 12141443), (12141476, 12141533), (12141729, 12141792)] 2021-10-25 09:33:53.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039689: ['FBtr0085473'] 2021-10-25 09:33:53.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039689 has a single transcript. 2021-10-25 09:33:53.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053260: ['FBtr0302436'] 2021-10-25 09:33:53.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053260 has a single transcript. 2021-10-25 09:33:53.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267651: ['FBtr0347107', 'FBtr0433529'] 2021-10-25 09:33:53.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261289: ['FBtr0345058'] 2021-10-25 09:33:53.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261289 has a single transcript. 2021-10-25 09:33:53.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053262: ['FBtr0302393'] 2021-10-25 09:33:53.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053262 has a single transcript. 2021-10-25 09:33:53.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261290: ['FBtr0091780'] 2021-10-25 09:33:53.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261290 has a single transcript. 2021-10-25 09:33:53.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053263: ['FBtr0075859'] 2021-10-25 09:33:53.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053263 has a single transcript. 2021-10-25 09:33:53.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032720: ['FBtr0089318'] 2021-10-25 09:33:53.272 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032720 has a single transcript. 2021-10-25 09:33:53.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039690: ['FBtr0085474', 'FBtr0085475', 'FBtr0333820', 'FBtr0333821', 'FBtr0310267', 'FBtr0330296', 'FBtr0306104'] 2021-10-25 09:33:53.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261291: ['FBtr0091686'] 2021-10-25 09:33:53.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261291 has a single transcript. 2021-10-25 09:33:53.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053265: ['FBtr0076063'] 2021-10-25 09:33:53.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053265 has a single transcript. 2021-10-25 09:33:53.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261292: ['FBtr0091520'] 2021-10-25 09:33:53.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261292 has a single transcript. 2021-10-25 09:33:53.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032721: ['FBtr0089314', 'FBtr0089315', 'FBtr0347402'] 2021-10-25 09:33:53.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002431: ['FBtr0082090', 'FBtr0339599'] 2021-10-25 09:33:53.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053267: ['FBtr0305649'] 2021-10-25 09:33:53.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053267 has a single transcript. 2021-10-25 09:33:53.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261293: ['FBtr0091479'] 2021-10-25 09:33:53.295 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261293 has a single transcript. 2021-10-25 09:33:53.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053269: ['FBtr0076148', 'FBtr0308057'] 2021-10-25 09:33:53.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261294: ['FBtr0091928'] 2021-10-25 09:33:53.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261294 has a single transcript. 2021-10-25 09:33:53.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21371227, 21371286), (21373080, 21373330)] 2021-10-25 09:33:53.307 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21370917, 21373575, 'FBtr0433529_exon_1') contains intron (21371227, 21371286) 2021-10-25 09:33:53.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433529_exon_1'] 2021-10-25 09:33:53.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261341: ['FBtr0345144', 'FBtr0345145', 'FBtr0302335'] 2021-10-25 09:33:53.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9715164, 9715223), (9715454, 9715520), (9715668, 9715723), (9715930, 9715990), (9716316, 9716373), (9716450, 9716516), (9717473, 9717529), (9718276, 9718330), (9718541, 9718630), (9719103, 9719163), (9719397, 9719476), (9719621, 9719713), (9719621, 9719719), (9723220, 9723307), (9723498, 9723560), (9723799, 9723859), (9724077, 9724136), (9724416, 9724479), (9724677, 9725463)] 2021-10-25 09:33:53.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:53.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.338 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18856077, 18856142), (18856848, 18856915), (18857064, 18857176), (18857403, 18857587), (18857403, 18857541), (18857403, 18858951), (18859075, 18859136)] 2021-10-25 09:33:53.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267652: ['FBtr0347106', 'FBtr0433528'] 2021-10-25 09:33:53.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036258: ['FBtr0076022'] 2021-10-25 09:33:53.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036258 has a single transcript. 2021-10-25 09:33:53.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036259: ['FBtr0273438', 'FBtr0330196'] 2021-10-25 09:33:53.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19691656, 19691808), (19691958, 19692264), (19691958, 19692720), (19692377, 19692982), (19692851, 19692982), (19693094, 19694972), (19693094, 19693499), (19693571, 19694972), (19695042, 19695164)] 2021-10-25 09:33:53.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053270: ['FBtr0076149'] 2021-10-25 09:33:53.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053270 has a single transcript. 2021-10-25 09:33:53.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053271: ['FBtr0076150'] 2021-10-25 09:33:53.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21371227, 21371286), (21372067, 21372141)] 2021-10-25 09:33:53.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053271 has a single transcript. 2021-10-25 09:33:53.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21370917, 21373575, 'FBtr0433528_exon_1') contains intron (21371227, 21371286) 2021-10-25 09:33:53.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433528_exon_1'] 2021-10-25 09:33:53.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002440: ['FBtr0077062', 'FBtr0346811', 'FBtr0346812'] 2021-10-25 09:33:53.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053272: ['FBtr0076159'] 2021-10-25 09:33:53.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053272 has a single transcript. 2021-10-25 09:33:53.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12158318, 12159147), (12159683, 12163499)] 2021-10-25 09:33:53.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29738314, 29739728), (29739979, 29740567), (29740407, 29740567), (29740419, 29740567), (29740778, 29740839), (29740967, 29741028), (29741090, 29741149), (29741369, 29741697), (29741369, 29741767)] 2021-10-25 09:33:53.434 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29741149, 29741952, 'FBtr0085474_exon_5') contains intron (29741369, 29741697) 2021-10-25 09:33:53.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.435 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29741149, 29741952, 'FBtr0085475_exon_5') contains intron (29741369, 29741697) 2021-10-25 09:33:53.435 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29741149, 29741952, 'FBtr0333820_exon_6') contains intron (29741369, 29741697) 2021-10-25 09:33:53.435 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29741149, 29741952, 'FBtr0333821_exon_5') contains intron (29741369, 29741697) 2021-10-25 09:33:53.436 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29741149, 29741952, 'FBtr0330296_exon_5') contains intron (29741369, 29741697) 2021-10-25 09:33:53.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085474_exon_5', 'FBtr0085475_exon_5', 'FBtr0333820_exon_6', 'FBtr0333821_exon_5', 'FBtr0330296_exon_5'] 2021-10-25 09:33:53.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053276: ['FBtr0114530'] 2021-10-25 09:33:53.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053276 has a single transcript. 2021-10-25 09:33:53.444 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0273438': ['FBtr0330196']} 2021-10-25 09:33:53.445 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330196']] 2021-10-25 09:33:53.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053278: ['FBtr0076857'] 2021-10-25 09:33:53.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053278 has a single transcript. 2021-10-25 09:33:53.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036260: ['FBtr0076020'] 2021-10-25 09:33:53.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036260 has a single transcript. 2021-10-25 09:33:53.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053281: ['FBtr0077584'] 2021-10-25 09:33:53.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053281 has a single transcript. 2021-10-25 09:33:53.459 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085474': ['FBtr0330296']} 2021-10-25 09:33:53.460 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330296']] 2021-10-25 09:33:53.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036262: ['FBtr0290130', 'FBtr0333382'] 2021-10-25 09:33:53.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032723: ['FBtr0081193', 'FBtr0342929'] 2021-10-25 09:33:53.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053282: ['FBtr0113458'] 2021-10-25 09:33:53.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053282 has a single transcript. 2021-10-25 09:33:53.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267653: ['FBtr0347121'] 2021-10-25 09:33:53.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267653 has a single transcript. 2021-10-25 09:33:53.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053283: ['FBtr0302444'] 2021-10-25 09:33:53.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053283 has a single transcript. 2021-10-25 09:33:53.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267655: ['FBtr0347113'] 2021-10-25 09:33:53.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267655 has a single transcript. 2021-10-25 09:33:53.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053284: ['FBtr0078291'] 2021-10-25 09:33:53.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053284 has a single transcript. 2021-10-25 09:33:53.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6124738, 6124806), (6124869, 6125825), (6124869, 6125072), (6125654, 6125825), (6125993, 6126353), (6126497, 6128360), (6128469, 6128528)] 2021-10-25 09:33:53.494 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6125072, 6125993, 'FBtr0077062_exon_4') contains intron (6125654, 6125825) 2021-10-25 09:33:53.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077062_exon_4'] 2021-10-25 09:33:53.495 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267656: ['FBtr0347112'] 2021-10-25 09:33:53.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267656 has a single transcript. 2021-10-25 09:33:53.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053285: ['FBtr0078325'] 2021-10-25 09:33:53.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053285 has a single transcript. 2021-10-25 09:33:53.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261349: ['FBtr0302267'] 2021-10-25 09:33:53.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261349 has a single transcript. 2021-10-25 09:33:53.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267657: ['FBtr0347114'] 2021-10-25 09:33:53.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267657 has a single transcript. 2021-10-25 09:33:53.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053286: ['FBtr0113459'] 2021-10-25 09:33:53.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053286 has a single transcript. 2021-10-25 09:33:53.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261353: ['FBtr0302271'] 2021-10-25 09:33:53.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261353 has a single transcript. 2021-10-25 09:33:53.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267658: ['FBtr0347116'] 2021-10-25 09:33:53.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267658 has a single transcript. 2021-10-25 09:33:53.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12185052, 12186122), (12186057, 12186122), (12186297, 12186534), (12187111, 12187172)] 2021-10-25 09:33:53.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18917088, 18917189), (18917516, 18919924), (18920016, 18920278), (18920371, 18920470), (18920616, 18936424), (18936564, 18938561), (18938685, 18938753), (18939011, 18939180), (18940627, 18940687), (18942958, 18943276), (18942958, 18943282)] 2021-10-25 09:33:53.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053287: ['FBtr0290073'] 2021-10-25 09:33:53.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053287 has a single transcript. 2021-10-25 09:33:53.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261356: ['FBtr0302274'] 2021-10-25 09:33:53.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261356 has a single transcript. 2021-10-25 09:33:53.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267659: ['FBtr0347117'] 2021-10-25 09:33:53.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267659 has a single transcript. 2021-10-25 09:33:53.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053288: ['FBtr0301013'] 2021-10-25 09:33:53.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053288 has a single transcript. 2021-10-25 09:33:53.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261357: ['FBtr0302275'] 2021-10-25 09:33:53.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261357 has a single transcript. 2021-10-25 09:33:53.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267660: ['FBtr0347119', 'FBtr0347120'] 2021-10-25 09:33:53.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053289: ['FBtr0305326', 'FBtr0305327'] 2021-10-25 09:33:53.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261358: ['FBtr0346520', 'FBtr0302276'] 2021-10-25 09:33:53.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036263: ['FBtr0076019', 'FBtr0333384', 'FBtr0346911'] 2021-10-25 09:33:53.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032724: ['FBtr0081132'] 2021-10-25 09:33:53.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032724 has a single transcript. 2021-10-25 09:33:53.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21534813, 21534876), (21534976, 21535029), (21535290, 21535342), (21535553, 21535611), (21536092, 21536153), (21536197, 21536748)] 2021-10-25 09:33:53.581 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21535611, 21536197, 'FBtr0305326_exon_5') contains intron (21536092, 21536153) 2021-10-25 09:33:53.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305326_exon_5'] 2021-10-25 09:33:53.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16017858, 16017935), (16018324, 16018817), (16019221, 16019628), (16019221, 16020473), (16019996, 16020473)] 2021-10-25 09:33:53.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027654: ['FBtr0085681', 'FBtr0085682', 'FBtr0085683'] 2021-10-25 09:33:53.586 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032725: ['FBtr0081192', 'FBtr0342928'] 2021-10-25 09:33:53.589 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:53.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.589 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002441: ['FBtr0085175'] 2021-10-25 09:33:53.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002441 has a single transcript. 2021-10-25 09:33:53.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002466: ['FBtr0075970', 'FBtr0332643'] 2021-10-25 09:33:53.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18951346, 18951406), (18951537, 18951697)] 2021-10-25 09:33:53.630 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053290: ['FBtr0078370'] 2021-10-25 09:33:53.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053290 has a single transcript. 2021-10-25 09:33:53.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053293: ['FBtr0078824'] 2021-10-25 09:33:53.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053293 has a single transcript. 2021-10-25 09:33:53.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267661: ['FBtr0347124', 'FBtr0347125'] 2021-10-25 09:33:53.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30518573, 30519646), (30518573, 30519607), (30519763, 30523227), (30523329, 30526242), (30526375, 30526983)] 2021-10-25 09:33:53.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12509972, 12510028), (12510224, 12510300), (12511803, 12512034), (12513402, 12513461), (12513402, 12513473), (12513824, 12513880), (12514125, 12514381)] 2021-10-25 09:33:53.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12192424, 12192493), (12193435, 12193490)] 2021-10-25 09:33:53.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261360: ['FBtr0302277', 'FBtr0302278', 'FBtr0302279'] 2021-10-25 09:33:53.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053294: ['FBtr0308945', 'FBtr0308946'] 2021-10-25 09:33:53.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032726: ['FBtr0081191', 'FBtr0342926', 'FBtr0342927'] 2021-10-25 09:33:53.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4395728, 4395889), (4396036, 4396117), (4396303, 4396379)] 2021-10-25 09:33:53.696 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4395889, 4396303, 'FBtr0347124_exon_2') contains intron (4396036, 4396117) 2021-10-25 09:33:53.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4395548, 4396036, 'FBtr0347125_exon_1') contains intron (4395728, 4395889) 2021-10-25 09:33:53.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347124_exon_2', 'FBtr0347125_exon_1'] 2021-10-25 09:33:53.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4187151, 4194220), (4191536, 4194220), (4194329, 4194391), (4194873, 4194948), (4195567, 4195626), (4195808, 4195868)] 2021-10-25 09:33:53.701 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4195626, 4196210, 'FBtr0308945_exon_5') contains intron (4195808, 4195868) 2021-10-25 09:33:53.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308945_exon_5'] 2021-10-25 09:33:53.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039691: ['FBtr0085476'] 2021-10-25 09:33:53.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039691 has a single transcript. 2021-10-25 09:33:53.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039694: ['FBtr0085538'] 2021-10-25 09:33:53.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039694 has a single transcript. 2021-10-25 09:33:53.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002521: ['FBtr0089204', 'FBtr0089205'] 2021-10-25 09:33:53.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039696: ['FBtr0085537'] 2021-10-25 09:33:53.718 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19722174, 19722261), (19722426, 19722520), (19722749, 19722814), (19723121, 19723190), (19723356, 19723473), (19723806, 19723867), (19724158, 19724278), (19724439, 19724515), (19724687, 19724756), (19724979, 19725051), (19725206, 19725280), (19725493, 19726120), (19726186, 19726309), (19726507, 19726647), (19726873, 19780039), (19780279, 19789963), (19790254, 19793453), (19790254, 19790883), (19790254, 19791447), (19791610, 19793453)] 2021-10-25 09:33:53.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039696 has a single transcript. 2021-10-25 09:33:53.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039697: ['FBtr0085535', 'FBtr0085536'] 2021-10-25 09:33:53.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036264: ['FBtr0076005'] 2021-10-25 09:33:53.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036264 has a single transcript. 2021-10-25 09:33:53.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027655: ['FBtr0085310', 'FBtr0336788'] 2021-10-25 09:33:53.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036266: ['FBtr0076016'] 2021-10-25 09:33:53.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036266 has a single transcript. 2021-10-25 09:33:53.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18952997, 18953157), (18953337, 18953403), (18953573, 18954271), (18953573, 18953673), (18953790, 18954271)] 2021-10-25 09:33:53.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18953403, 18953790, 'FBtr0342926_exon_2') contains intron (18953573, 18953673) 2021-10-25 09:33:53.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342926_exon_2'] 2021-10-25 09:33:53.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1173030, 1173083), (1173203, 1173805), (1174097, 1174158), (1174928, 1174981), (1175123, 1181047), (1181281, 1181589), (1181281, 1181367)] 2021-10-25 09:33:53.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267662: ['FBtr0347131'] 2021-10-25 09:33:53.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267662 has a single transcript. 2021-10-25 09:33:53.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053296: ['FBtr0302519', 'FBtr0343408'] 2021-10-25 09:33:53.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036271: ['FBtr0076011', 'FBtr0333357'] 2021-10-25 09:33:53.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267663: ['FBtr0347132'] 2021-10-25 09:33:53.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267663 has a single transcript. 2021-10-25 09:33:53.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29802659, 29802789), (29802843, 29802905)] 2021-10-25 09:33:53.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267664: ['FBtr0347133'] 2021-10-25 09:33:53.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267664 has a single transcript. 2021-10-25 09:33:53.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267665: ['FBtr0347130'] 2021-10-25 09:33:53.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267665 has a single transcript. 2021-10-25 09:33:53.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267666: ['FBtr0347128', 'FBtr0347129'] 2021-10-25 09:33:53.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28696405, 28696671), (28696929, 28696992), (28697209, 28697270), (28697400, 28700334), (28701003, 28701437), (28702040, 28705534), (28705858, 28705916), (28706839, 28708479), (28709250, 28710258), (28710849, 28710937), (28711121, 28713942), (28714220, 28714667), (28715219, 28715596), (28715754, 28715858), (28716480, 28718430), (28719108, 28719709), (28719877, 28719966), (28720256, 28720622), (28720704, 28720839), (28721724, 28721809), (28721997, 28723820), (28724069, 28724999), (28725363, 28725603), (28725741, 28725950), (28726213, 28727524), (28727699, 28728814), (28729049, 28732213), (28732482, 28733200)] 2021-10-25 09:33:53.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:53.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7714378, 7714432), (7714639, 7714702), (7714831, 7714894), (7715043, 7715164), (7715619, 7715727), (7715804, 7715861), (7716025, 7716084), (7716216, 7716390)] 2021-10-25 09:33:53.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002522: ['FBtr0081696', 'FBtr0308035'] 2021-10-25 09:33:53.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039698: ['FBtr0085483'] 2021-10-25 09:33:53.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039698 has a single transcript. 2021-10-25 09:33:53.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261361: ['FBtr0302283'] 2021-10-25 09:33:53.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261361 has a single transcript. 2021-10-25 09:33:53.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039702: ['FBtr0085533'] 2021-10-25 09:33:53.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039702 has a single transcript. 2021-10-25 09:33:53.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261363: ['FBtr0302290'] 2021-10-25 09:33:53.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261363 has a single transcript. 2021-10-25 09:33:53.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10307132, 10313114)] 2021-10-25 09:33:53.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039703: ['FBtr0085531'] 2021-10-25 09:33:53.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039703 has a single transcript. 2021-10-25 09:33:53.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261373: ['FBtr0301037', 'FBtr0343490'] 2021-10-25 09:33:53.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039704: ['FBtr0085485', 'FBtr0085486'] 2021-10-25 09:33:53.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032727: ['FBtr0081190', 'FBtr0344844', 'FBtr0344845'] 2021-10-25 09:33:53.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036272: ['FBtr0076009', 'FBtr0076010', 'FBtr0346392', 'FBtr0346393'] 2021-10-25 09:33:53.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053299: ['FBtr0300213', 'FBtr0303875'] 2021-10-25 09:33:53.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027657: ['FBtr0083245', 'FBtr0083246', 'FBtr0083247', 'FBtr0083248', 'FBtr0300895', 'FBtr0344381'] 2021-10-25 09:33:53.864 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6662325, 6662570), (6662986, 6663183), (6662986, 6677130)] 2021-10-25 09:33:53.865 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.865 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24668680, 24668736), (24669096, 24669151)] 2021-10-25 09:33:53.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267667: ['FBtr0347134', 'FBtr0347135'] 2021-10-25 09:33:53.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29819279, 29822329), (29819279, 29822357), (29822754, 29822819), (29822980, 29823039), (29823241, 29823374), (29823626, 29823768), (29824700, 29824773), (29824974, 29825117)] 2021-10-25 09:33:53.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9656656, 9656719)] 2021-10-25 09:33:53.902 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9656599, 9657424, 'FBtr0300213_exon_1') contains intron (9656656, 9656719) 2021-10-25 09:33:53.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300213_exon_1'] 2021-10-25 09:33:53.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18956324, 18956430)] 2021-10-25 09:33:53.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002524: ['FBtr0080738', 'FBtr0343735'] 2021-10-25 09:33:53.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:53.943 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.943 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261380: ['FBtr0302273'] 2021-10-25 09:33:53.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261380 has a single transcript. 2021-10-25 09:33:53.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12273041, 12273497), (12273620, 12274002), (12273620, 12275075), (12274111, 12276889), (12275187, 12276889)] 2021-10-25 09:33:53.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:53.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261381: ['FBtr0302272'] 2021-10-25 09:33:53.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261381 has a single transcript. 2021-10-25 09:33:53.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053300: ['FBtr0305657'] 2021-10-25 09:33:53.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053300 has a single transcript. 2021-10-25 09:33:53.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039705: ['FBtr0085528', 'FBtr0085529', 'FBtr0085530', 'FBtr0339144'] 2021-10-25 09:33:53.973 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076009': ['FBtr0346393'], 'FBtr0076010': ['FBtr0346392']} 2021-10-25 09:33:53.973 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346393'], ['FBtr0346392']] 2021-10-25 09:33:53.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261383: ['FBtr0070841', 'FBtr0070842', 'FBtr0332399', 'FBtr0332400', 'FBtr0332401'] 2021-10-25 09:33:53.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053301: ['FBtr0079935', 'FBtr0343742'] 2021-10-25 09:33:53.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15499424, 15502116), (15503226, 15503290), (15503553, 15503698)] 2021-10-25 09:33:53.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:53.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15897423, 15897547), (15897709, 15897774), (15898015, 15902442), (15898015, 15901207), (15898015, 15902201), (15898015, 15904501), (15898015, 15901009), (15902383, 15902442)] 2021-10-25 09:33:54.007 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15897547, 15898015, 'FBtr0300895_exon_2') contains intron (15897709, 15897774) 2021-10-25 09:33:54.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300895_exon_2'] 2021-10-25 09:33:54.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267668: ['FBtr0347136', 'FBtr0347137', 'FBtr0347138', 'FBtr0347139', 'FBtr0347140'] 2021-10-25 09:33:54.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036273: ['FBtr0076007', 'FBtr0333356'] 2021-10-25 09:33:54.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10050642, 10050701)] 2021-10-25 09:33:54.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032728: ['FBtr0081133'] 2021-10-25 09:33:54.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032728 has a single transcript. 2021-10-25 09:33:54.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002525: ['FBtr0079100', 'FBtr0307058', 'FBtr0307059', 'FBtr0346460'] 2021-10-25 09:33:54.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29827653, 29827849), (29827993, 29828072), (29828157, 29828225), (29828526, 29831689), (29831832, 29831914), (29832348, 29833192), (29832372, 29833192), (29833281, 29833932), (29833281, 29833802), (29834095, 29834360), (29834622, 29834745)] 2021-10-25 09:33:54.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032729: ['FBtr0081186', 'FBtr0340323', 'FBtr0340324'] 2021-10-25 09:33:54.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12277736, 12278225), (12278283, 12278353), (12279879, 12279948), (12280863, 12280924)] 2021-10-25 09:33:54.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5743912, 5746771), (5743912, 5747101), (5743912, 5744355), (5744699, 5746202), (5744699, 5746771), (5744699, 5747101)] 2021-10-25 09:33:54.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053302: ['FBtr0079936'] 2021-10-25 09:33:54.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053302 has a single transcript. 2021-10-25 09:33:54.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053303: ['FBtr0080052', 'FBtr0332197'] 2021-10-25 09:33:54.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18972547, 18972601), (18973459, 18973916)] 2021-10-25 09:33:54.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10323871, 10348192), (10323871, 10326636), (10327662, 10348192), (10332800, 10348192), (10348230, 10358990)] 2021-10-25 09:33:54.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036274: ['FBtr0301071'] 2021-10-25 09:33:54.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036274 has a single transcript. 2021-10-25 09:33:54.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5542660, 5543324), (5543272, 5543324), (5543794, 5544037), (5544741, 5544806)] 2021-10-25 09:33:54.152 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5543099, 5543794, 'FBtr0307058_exon_1') contains intron (5543272, 5543324) 2021-10-25 09:33:54.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307058_exon_1'] 2021-10-25 09:33:54.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036277: ['FBtr0075954'] 2021-10-25 09:33:54.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036277 has a single transcript. 2021-10-25 09:33:54.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10375091, 10375147)] 2021-10-25 09:33:54.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036278: ['FBtr0075989', 'FBtr0330069'] 2021-10-25 09:33:54.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039707: ['FBtr0301745', 'FBtr0301746', 'FBtr0339143'] 2021-10-25 09:33:54.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12340502, 12341133), (12341285, 12342157), (12342363, 12342427), (12342611, 12347193), (12348139, 12351181)] 2021-10-25 09:33:54.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.219 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075989': ['FBtr0330069']} 2021-10-25 09:33:54.219 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330069']] 2021-10-25 09:33:54.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053306: ['FBtr0080564'] 2021-10-25 09:33:54.220 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053306 has a single transcript. 2021-10-25 09:33:54.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053307: ['FBtr0080565', 'FBtr0343672'] 2021-10-25 09:33:54.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036279: ['FBtr0075987', 'FBtr0333838', 'FBtr0333839', 'FBtr0333840', 'FBtr0333841', 'FBtr0333842'] 2021-10-25 09:33:54.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027660: ['FBtr0075232', 'FBtr0075233', 'FBtr0075234', 'FBtr0075235', 'FBtr0339898'] 2021-10-25 09:33:54.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032730: ['FBtr0081134', 'FBtr0340317'] 2021-10-25 09:33:54.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29836197, 29836531), (29836832, 29836912), (29836832, 29836888), (29837262, 29837317)] 2021-10-25 09:33:54.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13840503, 13840801), (13841035, 13841095), (13841374, 13841443)] 2021-10-25 09:33:54.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18974847, 18974904), (18977196, 18977262)] 2021-10-25 09:33:54.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261385: ['FBtr0088912', 'FBtr0100216', 'FBtr0088911'] 2021-10-25 09:33:54.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002526: ['FBtr0077014'] 2021-10-25 09:33:54.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002526 has a single transcript. 2021-10-25 09:33:54.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002531: ['FBtr0088763', 'FBtr0333557'] 2021-10-25 09:33:54.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053309: ['FBtr0080674'] 2021-10-25 09:33:54.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053309 has a single transcript. 2021-10-25 09:33:54.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053310: ['FBtr0343684'] 2021-10-25 09:33:54.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053310 has a single transcript. 2021-10-25 09:33:54.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267671: ['FBtr0347161'] 2021-10-25 09:33:54.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267671 has a single transcript. 2021-10-25 09:33:54.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8431125, 8431189)] 2021-10-25 09:33:54.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17398330, 17398394), (17398531, 17398586), (17398732, 17401610), (17401842, 17406409), (17401842, 17409224), (17401842, 17403492), (17403734, 17404587), (17409872, 17421353), (17409872, 17415220)] 2021-10-25 09:33:54.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053315: ['FBtr0081172'] 2021-10-25 09:33:54.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053315 has a single transcript. 2021-10-25 09:33:54.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267672: ['FBtr0347164'] 2021-10-25 09:33:54.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267672 has a single transcript. 2021-10-25 09:33:54.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032731: ['FBtr0081185', 'FBtr0340322'] 2021-10-25 09:33:54.358 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7590461, 7590567), (7590882, 7590945), (7591425, 7591506), (7591873, 7591937), (7592303, 7592361), (7592533, 7592694), (7592833, 7592900), (7593077, 7593138), (7593360, 7593417), (7593781, 7593894), (7594193, 7594256)] 2021-10-25 09:33:54.358 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7590945, 7591873, 'FBtr0088912_exon_3') contains intron (7591425, 7591506) 2021-10-25 09:33:54.359 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7590945, 7591873, 'FBtr0100216_exon_3') contains intron (7591425, 7591506) 2021-10-25 09:33:54.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088912_exon_3', 'FBtr0100216_exon_3'] 2021-10-25 09:33:54.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053317: ['FBtr0089856'] 2021-10-25 09:33:54.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053317 has a single transcript. 2021-10-25 09:33:54.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267673: ['FBtr0347162'] 2021-10-25 09:33:54.361 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267673 has a single transcript. 2021-10-25 09:33:54.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267674: ['FBtr0347163'] 2021-10-25 09:33:54.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267674 has a single transcript. 2021-10-25 09:33:54.371 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12368957, 12369048), (12369284, 12369936), (12370166, 12370234), (12370332, 12370958), (12370332, 12371760), (12370332, 12371543), (12371006, 12371543), (12371603, 12371760), (12372571, 12372633), (12372769, 12372969), (12373079, 12373139), (12373282, 12373354), (12373520, 12373577), (12373720, 12373784), (12373899, 12373956), (12374210, 12374287), (12374546, 12376000), (12376115, 12376436), (12376616, 12379138), (12379644, 12390496), (12379644, 12387652), (12379644, 12391322)] 2021-10-25 09:33:54.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053318: ['FBtr0089857'] 2021-10-25 09:33:54.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053318 has a single transcript. 2021-10-25 09:33:54.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267675: ['FBtr0347165'] 2021-10-25 09:33:54.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267675 has a single transcript. 2021-10-25 09:33:54.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039709: ['FBtr0085488', 'FBtr0303095'] 2021-10-25 09:33:54.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267676: ['FBtr0347166'] 2021-10-25 09:33:54.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267676 has a single transcript. 2021-10-25 09:33:54.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053319: ['FBtr0089858'] 2021-10-25 09:33:54.384 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053319 has a single transcript. 2021-10-25 09:33:54.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267677: ['FBtr0347167'] 2021-10-25 09:33:54.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267677 has a single transcript. 2021-10-25 09:33:54.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053322: ['FBtr0081455'] 2021-10-25 09:33:54.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053322 has a single transcript. 2021-10-25 09:33:54.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267678: ['FBtr0347168'] 2021-10-25 09:33:54.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267678 has a single transcript. 2021-10-25 09:33:54.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18978769, 18986671)] 2021-10-25 09:33:54.400 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.401 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053325: ['FBtr0307515'] 2021-10-25 09:33:54.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053325 has a single transcript. 2021-10-25 09:33:54.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267679: ['FBtr0347169'] 2021-10-25 09:33:54.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267679 has a single transcript. 2021-10-25 09:33:54.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002533: ['FBtr0088761', 'FBtr0333556'] 2021-10-25 09:33:54.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053329: ['FBtr0300406'] 2021-10-25 09:33:54.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053329 has a single transcript. 2021-10-25 09:33:54.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267680: ['FBtr0347170'] 2021-10-25 09:33:54.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267680 has a single transcript. 2021-10-25 09:33:54.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053333: ['FBtr0083441'] 2021-10-25 09:33:54.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053333 has a single transcript. 2021-10-25 09:33:54.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267681: ['FBtr0347171'] 2021-10-25 09:33:54.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267681 has a single transcript. 2021-10-25 09:33:54.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29841790, 29845598), (29841790, 29842724), (29842873, 29845598), (29845760, 29846692), (29846871, 29846948), (29847071, 29849076), (29849253, 29849320), (29849386, 29849621), (29852531, 29852600), (29853128, 29853193), (29853312, 29853381), (29854107, 29854172)] 2021-10-25 09:33:54.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053337: ['FBtr0304612'] 2021-10-25 09:33:54.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053337 has a single transcript. 2021-10-25 09:33:54.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267682: ['FBtr0347172'] 2021-10-25 09:33:54.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267682 has a single transcript. 2021-10-25 09:33:54.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267683: ['FBtr0347173'] 2021-10-25 09:33:54.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267683 has a single transcript. 2021-10-25 09:33:54.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053339: ['FBtr0303581'] 2021-10-25 09:33:54.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053339 has a single transcript. 2021-10-25 09:33:54.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053340: ['FBtr0084611'] 2021-10-25 09:33:54.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053340 has a single transcript. 2021-10-25 09:33:54.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267684: ['FBtr0347174'] 2021-10-25 09:33:54.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267684 has a single transcript. 2021-10-25 09:33:54.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8434459, 8434521)] 2021-10-25 09:33:54.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267685: ['FBtr0347175'] 2021-10-25 09:33:54.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267685 has a single transcript. 2021-10-25 09:33:54.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053341: ['FBtr0084613'] 2021-10-25 09:33:54.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053341 has a single transcript. 2021-10-25 09:33:54.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261386: ['FBtr0304153'] 2021-10-25 09:33:54.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261386 has a single transcript. 2021-10-25 09:33:54.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032732: ['FBtr0081135'] 2021-10-25 09:33:54.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032732 has a single transcript. 2021-10-25 09:33:54.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267686: ['FBtr0347176'] 2021-10-25 09:33:54.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267686 has a single transcript. 2021-10-25 09:33:54.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032733: ['FBtr0081184', 'FBtr0340321'] 2021-10-25 09:33:54.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053346: ['FBtr0302527'] 2021-10-25 09:33:54.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053346 has a single transcript. 2021-10-25 09:33:54.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261387: ['FBtr0111274', 'FBtr0111277'] 2021-10-25 09:33:54.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267687: ['FBtr0347177'] 2021-10-25 09:33:54.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267687 has a single transcript. 2021-10-25 09:33:54.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053348: ['FBtr0086168'] 2021-10-25 09:33:54.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053348 has a single transcript. 2021-10-25 09:33:54.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267688: ['FBtr0347180'] 2021-10-25 09:33:54.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267688 has a single transcript. 2021-10-25 09:33:54.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053349: ['FBtr0086169'] 2021-10-25 09:33:54.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053349 has a single transcript. 2021-10-25 09:33:54.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039710: ['FBtr0339942', 'FBtr0085527', 'FBtr0335006'] 2021-10-25 09:33:54.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267689: ['FBtr0347187', 'FBtr0347188', 'FBtr0347189', 'FBtr0347190'] 2021-10-25 09:33:54.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053353: ['FBtr0086345'] 2021-10-25 09:33:54.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053353 has a single transcript. 2021-10-25 09:33:54.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053354: ['FBtr0086346'] 2021-10-25 09:33:54.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053354 has a single transcript. 2021-10-25 09:33:54.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18989771, 18989952), (18990084, 18990154), (18990087, 18990154)] 2021-10-25 09:33:54.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002534: ['FBtr0088743', 'FBtr0333554'] 2021-10-25 09:33:54.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4817730, 4817784), (4817934, 4817997), (4818143, 4818208), (4819229, 4819287), (4819936, 4823904), (4819936, 4824110)] 2021-10-25 09:33:54.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053355: ['FBtr0086347'] 2021-10-25 09:33:54.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053355 has a single transcript. 2021-10-25 09:33:54.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053356: ['FBtr0086348'] 2021-10-25 09:33:54.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053356 has a single transcript. 2021-10-25 09:33:54.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053357: ['FBtr0086349'] 2021-10-25 09:33:54.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053357 has a single transcript. 2021-10-25 09:33:54.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053358: ['FBtr0086350'] 2021-10-25 09:33:54.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053358 has a single transcript. 2021-10-25 09:33:54.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027779: ['FBtr0080940', 'FBtr0080941', 'FBtr0080942', 'FBtr0335143'] 2021-10-25 09:33:54.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053359: ['FBtr0086351'] 2021-10-25 09:33:54.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053359 has a single transcript. 2021-10-25 09:33:54.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29855043, 29855129), (29855043, 29855952), (29855648, 29855952), (29856353, 29856410), (29856574, 29856640), (29856833, 29856886)] 2021-10-25 09:33:54.563 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29855628, 29856353, 'FBtr0335006_exon_4') contains intron (29855648, 29855952) 2021-10-25 09:33:54.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335006_exon_4'] 2021-10-25 09:33:54.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8435500, 8435556)] 2021-10-25 09:33:54.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053360: ['FBtr0086352'] 2021-10-25 09:33:54.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053360 has a single transcript. 2021-10-25 09:33:54.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032734: ['FBtr0081136'] 2021-10-25 09:33:54.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032734 has a single transcript. 2021-10-25 09:33:54.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053361: ['FBtr0086353'] 2021-10-25 09:33:54.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053361 has a single transcript. 2021-10-25 09:33:54.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261393: ['FBtr0307274', 'FBtr0081547'] 2021-10-25 09:33:54.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032740: ['FBtr0081140', 'FBtr0321270', 'FBtr0321271', 'FBtr0321272'] 2021-10-25 09:33:54.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7754394, 7754460), (7754549, 7761884), (7756930, 7761884), (7762035, 7763309), (7763444, 7763505), (7763696, 7764540), (7764333, 7764540), (7764687, 7764754), (7765154, 7765213)] 2021-10-25 09:33:54.586 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053362: ['FBtr0086354'] 2021-10-25 09:33:54.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053362 has a single transcript. 2021-10-25 09:33:54.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053363: ['FBtr0086355'] 2021-10-25 09:33:54.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053363 has a single transcript. 2021-10-25 09:33:54.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053364: ['FBtr0086356'] 2021-10-25 09:33:54.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053364 has a single transcript. 2021-10-25 09:33:54.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053365: ['FBtr0086357'] 2021-10-25 09:33:54.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053365 has a single transcript. 2021-10-25 09:33:54.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053366: ['FBtr0086358'] 2021-10-25 09:33:54.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053366 has a single transcript. 2021-10-25 09:33:54.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036282: ['FBtr0075985'] 2021-10-25 09:33:54.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036282 has a single transcript. 2021-10-25 09:33:54.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7534716, 7534801), (7535535, 7535732), (7535883, 7535945), (7536219, 7536283), (7536222, 7536283)] 2021-10-25 09:33:54.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002535: ['FBtr0088744', 'FBtr0333555'] 2021-10-25 09:33:54.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053367: ['FBtr0086359'] 2021-10-25 09:33:54.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053367 has a single transcript. 2021-10-25 09:33:54.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036285: ['FBtr0075980', 'FBtr0332087'] 2021-10-25 09:33:54.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053368: ['FBtr0086360'] 2021-10-25 09:33:54.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053368 has a single transcript. 2021-10-25 09:33:54.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16723897, 16724057), (16724001, 16724068), (16724171, 16724231), (16724794, 16724858), (16724993, 16725891), (16724993, 16727009), (16726113, 16727009), (16727488, 16727629)] 2021-10-25 09:33:54.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053369: ['FBtr0086361'] 2021-10-25 09:33:54.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053369 has a single transcript. 2021-10-25 09:33:54.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053370: ['FBtr0086362'] 2021-10-25 09:33:54.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053370 has a single transcript. 2021-10-25 09:33:54.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039711: ['FBtr0089927', 'FBtr0303035'] 2021-10-25 09:33:54.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8437707, 8437764)] 2021-10-25 09:33:54.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053371: ['FBtr0086363'] 2021-10-25 09:33:54.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053371 has a single transcript. 2021-10-25 09:33:54.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19022528, 19023139), (19022528, 19023125), (19023086, 19023139)] 2021-10-25 09:33:54.688 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19023017, 19023646, 'FBtr0321272_exon_1') contains intron (19023086, 19023139) 2021-10-25 09:33:54.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0321272_exon_1'] 2021-10-25 09:33:54.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053372: ['FBtr0086364'] 2021-10-25 09:33:54.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053372 has a single transcript. 2021-10-25 09:33:54.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12423250, 12423449), (12423267, 12423449), (12423634, 12423700), (12424168, 12425382), (12425523, 12427557), (12427812, 12432075)] 2021-10-25 09:33:54.694 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.695 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261394: ['FBtr0071522'] 2021-10-25 09:33:54.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261394 has a single transcript. 2021-10-25 09:33:54.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053373: ['FBtr0086365'] 2021-10-25 09:33:54.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053373 has a single transcript. 2021-10-25 09:33:54.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261395: ['FBtr0085738'] 2021-10-25 09:33:54.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261395 has a single transcript. 2021-10-25 09:33:54.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053374: ['FBtr0086366'] 2021-10-25 09:33:54.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053374 has a single transcript. 2021-10-25 09:33:54.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053375: ['FBtr0086367'] 2021-10-25 09:33:54.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053375 has a single transcript. 2021-10-25 09:33:54.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261396: ['FBtr0336843', 'FBtr0302289'] 2021-10-25 09:33:54.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053376: ['FBtr0086368'] 2021-10-25 09:33:54.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29858650, 29858774), (29858718, 29858774)] 2021-10-25 09:33:54.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053376 has a single transcript. 2021-10-25 09:33:54.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.730 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053377: ['FBtr0086369'] 2021-10-25 09:33:54.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053377 has a single transcript. 2021-10-25 09:33:54.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002542: ['FBtr0081758'] 2021-10-25 09:33:54.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002542 has a single transcript. 2021-10-25 09:33:54.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267690: ['FBtr0347194'] 2021-10-25 09:33:54.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267690 has a single transcript. 2021-10-25 09:33:54.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036286: ['FBtr0075956', 'FBtr0308896', 'FBtr0346569'] 2021-10-25 09:33:54.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053378: ['FBtr0086370'] 2021-10-25 09:33:54.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053378 has a single transcript. 2021-10-25 09:33:54.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267691: ['FBtr0347195'] 2021-10-25 09:33:54.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267691 has a single transcript. 2021-10-25 09:33:54.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002543: ['FBtr0077941', 'FBtr0329985'] 2021-10-25 09:33:54.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053379: ['FBtr0086371'] 2021-10-25 09:33:54.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053379 has a single transcript. 2021-10-25 09:33:54.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19052217, 19052278)] 2021-10-25 09:33:54.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.774 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267692: ['FBtr0347202'] 2021-10-25 09:33:54.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267692 has a single transcript. 2021-10-25 09:33:54.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053380: ['FBtr0086372'] 2021-10-25 09:33:54.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053380 has a single transcript. 2021-10-25 09:33:54.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267693: ['FBtr0347203'] 2021-10-25 09:33:54.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267693 has a single transcript. 2021-10-25 09:33:54.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053381: ['FBtr0086373'] 2021-10-25 09:33:54.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053381 has a single transcript. 2021-10-25 09:33:54.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039712: ['FBtr0085523', 'FBtr0335005'] 2021-10-25 09:33:54.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267694: ['FBtr0347204'] 2021-10-25 09:33:54.791 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267694 has a single transcript. 2021-10-25 09:33:54.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053382: ['FBtr0086374'] 2021-10-25 09:33:54.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053382 has a single transcript. 2021-10-25 09:33:54.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267695: ['FBtr0347205'] 2021-10-25 09:33:54.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267695 has a single transcript. 2021-10-25 09:33:54.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053383: ['FBtr0086375'] 2021-10-25 09:33:54.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1382632, 1384926), (1385212, 1386847), (1387011, 1387106), (1387353, 1387430), (1387526, 1390892), (1391298, 1391388), (1391508, 1391586), (1392524, 1392689), (1392821, 1394191), (1394332, 1394473), (1394758, 1395902), (1396005, 1397061), (1397252, 1419903)] 2021-10-25 09:33:54.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053383 has a single transcript. 2021-10-25 09:33:54.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267696: ['FBtr0347206'] 2021-10-25 09:33:54.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267696 has a single transcript. 2021-10-25 09:33:54.808 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053384: ['FBtr0086376'] 2021-10-25 09:33:54.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053384 has a single transcript. 2021-10-25 09:33:54.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027780: ['FBtr0089673', 'FBtr0340243', 'FBtr0340244'] 2021-10-25 09:33:54.817 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077941': ['FBtr0329985']} 2021-10-25 09:33:54.817 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329985']] 2021-10-25 09:33:54.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267697: ['FBtr0347207'] 2021-10-25 09:33:54.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267697 has a single transcript. 2021-10-25 09:33:54.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053385: ['FBtr0086377'] 2021-10-25 09:33:54.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053385 has a single transcript. 2021-10-25 09:33:54.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29860614, 29860706), (29860635, 29860706)] 2021-10-25 09:33:54.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002552: ['FBtr0088651'] 2021-10-25 09:33:54.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002552 has a single transcript. 2021-10-25 09:33:54.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12471929, 12472021), (12472196, 12472546), (12472637, 12472706), (12472832, 12473184), (12472832, 12472925), (12472973, 12473184)] 2021-10-25 09:33:54.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053386: ['FBtr0086378'] 2021-10-25 09:33:54.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053386 has a single transcript. 2021-10-25 09:33:54.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267698: ['FBtr0081714', 'FBtr0081715', 'FBtr0081716', 'FBtr0334539', 'FBtr0334540', 'FBtr0334541', 'FBtr0334542', 'FBtr0334543', 'FBtr0334544'] 2021-10-25 09:33:54.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261397: ['FBtr0089743', 'FBtr0089744', 'FBtr0089745'] 2021-10-25 09:33:54.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053387: ['FBtr0086379'] 2021-10-25 09:33:54.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053387 has a single transcript. 2021-10-25 09:33:54.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032741: ['FBtr0081141'] 2021-10-25 09:33:54.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032741 has a single transcript. 2021-10-25 09:33:54.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002561: ['FBtr0070074'] 2021-10-25 09:33:54.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002561 has a single transcript. 2021-10-25 09:33:54.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053388: ['FBtr0086380'] 2021-10-25 09:33:54.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053388 has a single transcript. 2021-10-25 09:33:54.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032744: ['FBtr0081178'] 2021-10-25 09:33:54.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032744 has a single transcript. 2021-10-25 09:33:54.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002562: ['FBtr0073651'] 2021-10-25 09:33:54.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053389: ['FBtr0086381'] 2021-10-25 09:33:54.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002562 has a single transcript. 2021-10-25 09:33:54.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053389 has a single transcript. 2021-10-25 09:33:54.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053390: ['FBtr0086382'] 2021-10-25 09:33:54.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053390 has a single transcript. 2021-10-25 09:33:54.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032746: ['FBtr0081146'] 2021-10-25 09:33:54.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032746 has a single transcript. 2021-10-25 09:33:54.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002563: ['FBtr0078025', 'FBtr0345738'] 2021-10-25 09:33:54.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053391: ['FBtr0086383'] 2021-10-25 09:33:54.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053391 has a single transcript. 2021-10-25 09:33:54.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032748: ['FBtr0081148', 'FBtr0113043'] 2021-10-25 09:33:54.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8446505, 8446564), (8447868, 8447919), (8448353, 8448424), (8448364, 8448424), (8448706, 8448758), (8449097, 8449158)] 2021-10-25 09:33:54.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039713: ['FBtr0085489', 'FBtr0310274', 'FBtr0346158', 'FBtr0346159'] 2021-10-25 09:33:54.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053392: ['FBtr0086384'] 2021-10-25 09:33:54.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053392 has a single transcript. 2021-10-25 09:33:54.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053393: ['FBtr0086385'] 2021-10-25 09:33:54.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053393 has a single transcript. 2021-10-25 09:33:54.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053394: ['FBtr0086386'] 2021-10-25 09:33:54.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053394 has a single transcript. 2021-10-25 09:33:54.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7500508, 7500910), (7501724, 7501789), (7502028, 7502101), (7502590, 7502643), (7502737, 7502801), (7503028, 7503171), (7503028, 7503648), (7503195, 7503648), (7503762, 7503828), (7504715, 7504774), (7505301, 7505363), (7505499, 7505838), (7505499, 7505648), (7505746, 7505838), (7506019, 7506076), (7506589, 7506654), (7506786, 7506848), (7507377, 7507435), (7507660, 7507714)] 2021-10-25 09:33:54.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053395: ['FBtr0086387'] 2021-10-25 09:33:54.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053395 has a single transcript. 2021-10-25 09:33:54.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(898941, 899009)] 2021-10-25 09:33:54.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053396: ['FBtr0086388'] 2021-10-25 09:33:54.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053396 has a single transcript. 2021-10-25 09:33:54.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19055570, 19055628), (19056072, 19056251)] 2021-10-25 09:33:54.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036287: ['FBtr0113167', 'FBtr0346570'] 2021-10-25 09:33:54.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053397: ['FBtr0086389'] 2021-10-25 09:33:54.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053397 has a single transcript. 2021-10-25 09:33:54.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053398: ['FBtr0086390'] 2021-10-25 09:33:54.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053398 has a single transcript. 2021-10-25 09:33:54.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053399: ['FBtr0086391'] 2021-10-25 09:33:54.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053399 has a single transcript. 2021-10-25 09:33:54.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053400: ['FBtr0086392'] 2021-10-25 09:33:54.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053400 has a single transcript. 2021-10-25 09:33:54.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002564: ['FBtr0072463'] 2021-10-25 09:33:54.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002564 has a single transcript. 2021-10-25 09:33:54.979 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29861650, 29861760), (29861934, 29862198), (29862305, 29862784), (29863196, 29863414)] 2021-10-25 09:33:54.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12475246, 12475303), (12475520, 12475578), (12475693, 12475753), (12476229, 12476449), (12477277, 12477823), (12478131, 12479711), (12479877, 12484800)] 2021-10-25 09:33:54.980 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.980 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.981 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:54.981 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:54.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053401: ['FBtr0086393'] 2021-10-25 09:33:54.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053401 has a single transcript. 2021-10-25 09:33:54.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002565: ['FBtr0089324', 'FBtr0345352'] 2021-10-25 09:33:54.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027783: ['FBtr0087461'] 2021-10-25 09:33:54.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027783 has a single transcript. 2021-10-25 09:33:54.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053402: ['FBtr0086394'] 2021-10-25 09:33:54.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053402 has a single transcript. 2021-10-25 09:33:54.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032749: ['FBtr0081149', 'FBtr0336844'] 2021-10-25 09:33:55.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053403: ['FBtr0086395'] 2021-10-25 09:33:55.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053403 has a single transcript. 2021-10-25 09:33:55.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027784: ['FBtr0083717'] 2021-10-25 09:33:55.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027784 has a single transcript. 2021-10-25 09:33:55.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053404: ['FBtr0086396'] 2021-10-25 09:33:55.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053404 has a single transcript. 2021-10-25 09:33:55.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027785: ['FBtr0083712'] 2021-10-25 09:33:55.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027785 has a single transcript. 2021-10-25 09:33:55.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053405: ['FBtr0086397'] 2021-10-25 09:33:55.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053405 has a single transcript. 2021-10-25 09:33:55.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027786: ['FBtr0072477', 'FBtr0072478', 'FBtr0072479', 'FBtr0305544', 'FBtr0305545', 'FBtr0305546'] 2021-10-25 09:33:55.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053406: ['FBtr0086398'] 2021-10-25 09:33:55.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053406 has a single transcript. 2021-10-25 09:33:55.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261399: ['FBtr0346674'] 2021-10-25 09:33:55.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261399 has a single transcript. 2021-10-25 09:33:55.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19059850, 19059964), (19060118, 19060397), (19061194, 19061278), (19061899, 19061960)] 2021-10-25 09:33:55.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:55.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053407: ['FBtr0086399'] 2021-10-25 09:33:55.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053407 has a single transcript. 2021-10-25 09:33:55.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261401: ['FBtr0302292'] 2021-10-25 09:33:55.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261401 has a single transcript. 2021-10-25 09:33:55.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036288: ['FBtr0075976', 'FBtr0332645', 'FBtr0332646', 'FBtr0332647'] 2021-10-25 09:33:55.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053408: ['FBtr0086400'] 2021-10-25 09:33:55.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053408 has a single transcript. 2021-10-25 09:33:55.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261402: ['FBtr0302293'] 2021-10-25 09:33:55.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6350954, 6354913), (6351351, 6354913), (6353539, 6354913), (6354250, 6354913), (6354595, 6354913), (6355180, 6355265), (6355420, 6356432), (6356598, 6356749), (6357340, 6357874), (6357340, 6358282), (6359022, 6359091), (6359310, 6359381)] 2021-10-25 09:33:55.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261402 has a single transcript. 2021-10-25 09:33:55.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053409: ['FBtr0086401'] 2021-10-25 09:33:55.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053409 has a single transcript. 2021-10-25 09:33:55.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053410: ['FBtr0086402'] 2021-10-25 09:33:55.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053410 has a single transcript. 2021-10-25 09:33:55.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261403: ['FBtr0086086', 'FBtr0086085', 'FBtr0086084'] 2021-10-25 09:33:55.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053411: ['FBtr0086403'] 2021-10-25 09:33:55.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053411 has a single transcript. 2021-10-25 09:33:55.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053412: ['FBtr0086404'] 2021-10-25 09:33:55.083 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053412 has a single transcript. 2021-10-25 09:33:55.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032750: ['FBtr0081150'] 2021-10-25 09:33:55.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032750 has a single transcript. 2021-10-25 09:33:55.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053413: ['FBtr0086405'] 2021-10-25 09:33:55.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053413 has a single transcript. 2021-10-25 09:33:55.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032751: ['FBtr0081151'] 2021-10-25 09:33:55.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032751 has a single transcript. 2021-10-25 09:33:55.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002566: ['FBtr0111125', 'FBtr0111123', 'FBtr0333519', 'FBtr0344082'] 2021-10-25 09:33:55.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053414: ['FBtr0086406'] 2021-10-25 09:33:55.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053414 has a single transcript. 2021-10-25 09:33:55.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032752: ['FBtr0081174', 'FBtr0081175', 'FBtr0081176', 'FBtr0303241'] 2021-10-25 09:33:55.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053415: ['FBtr0086407'] 2021-10-25 09:33:55.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053415 has a single transcript. 2021-10-25 09:33:55.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039714: ['FBtr0089924', 'FBtr0089925', 'FBtr0089922', 'FBtr0089923', 'FBtr0089921', 'FBtr0089920', 'FBtr0303032', 'FBtr0303033', 'FBtr0303034'] 2021-10-25 09:33:55.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053416: ['FBtr0086408'] 2021-10-25 09:33:55.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053416 has a single transcript. 2021-10-25 09:33:55.126 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12487447, 12488082), (12488219, 12488554), (12488753, 12488827), (12488774, 12488827), (12488960, 12489011), (12489115, 12489740)] 2021-10-25 09:33:55.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.127 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053417: ['FBtr0086409'] 2021-10-25 09:33:55.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053417 has a single transcript. 2021-10-25 09:33:55.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053418: ['FBtr0086410'] 2021-10-25 09:33:55.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053418 has a single transcript. 2021-10-25 09:33:55.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5307352, 5307413), (5307352, 5307472), (5307652, 5316268), (5316479, 5320007), (5320191, 5320247), (5320316, 5320418), (5320615, 5325803), (5325999, 5326062), (5327791, 5327847), (5328028, 5329009)] 2021-10-25 09:33:55.146 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5307287, 5307652, 'FBtr0086086_exon_1') contains intron (5307352, 5307413) 2021-10-25 09:33:55.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086086_exon_1'] 2021-10-25 09:33:55.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053419: ['FBtr0086411'] 2021-10-25 09:33:55.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053419 has a single transcript. 2021-10-25 09:33:55.153 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(184662, 184777), (184669, 184777), (184669, 184774), (184681, 184777), (184681, 184774), (185074, 185134), (185303, 185366), (185864, 185925)] 2021-10-25 09:33:55.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (184625, 185074, 'FBtr0072478_exon_1') contains intron (184662, 184777) 2021-10-25 09:33:55.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072478_exon_1'] 2021-10-25 09:33:55.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053420: ['FBtr0086412'] 2021-10-25 09:33:55.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053420 has a single transcript. 2021-10-25 09:33:55.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053421: ['FBtr0086413'] 2021-10-25 09:33:55.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053421 has a single transcript. 2021-10-25 09:33:55.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053422: ['FBtr0086414'] 2021-10-25 09:33:55.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053422 has a single transcript. 2021-10-25 09:33:55.191 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22924925, 22924981), (22925107, 22925159), (22925330, 22925380), (22925498, 22925565), (22925919, 22927437), (22927765, 22938773), (22938842, 22938903), (22939305, 22939353), (22939540, 22939594), (22939834, 22939886), (22940013, 22940072)] 2021-10-25 09:33:55.192 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22924981, 22925330, 'FBtr0111123_exon_2') contains intron (22925107, 22925159) 2021-10-25 09:33:55.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111123_exon_2'] 2021-10-25 09:33:55.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053423: ['FBtr0086415'] 2021-10-25 09:33:55.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053423 has a single transcript. 2021-10-25 09:33:55.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19066738, 19066800), (19067104, 19067163), (19067517, 19067571), (19067700, 19067781), (19068023, 19068202), (19069218, 19069470), (19069218, 19069762), (19069551, 19069762)] 2021-10-25 09:33:55.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19068202, 19069851, 'FBtr0081174_exon_1') contains intron (19069218, 19069470) 2021-10-25 09:33:55.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19068202, 19069551, 'FBtr0081175_exon_2') contains intron (19069218, 19069470) 2021-10-25 09:33:55.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19069470, 19069851, 'FBtr0081176_exon_1') contains intron (19069551, 19069762) 2021-10-25 09:33:55.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081174_exon_1', 'FBtr0081175_exon_2', 'FBtr0081176_exon_1'] 2021-10-25 09:33:55.199 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053424: ['FBtr0086416'] 2021-10-25 09:33:55.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053424 has a single transcript. 2021-10-25 09:33:55.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053425: ['FBtr0086417'] 2021-10-25 09:33:55.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053425 has a single transcript. 2021-10-25 09:33:55.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053426: ['FBtr0086418'] 2021-10-25 09:33:55.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053426 has a single transcript. 2021-10-25 09:33:55.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053427: ['FBtr0086419'] 2021-10-25 09:33:55.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053427 has a single transcript. 2021-10-25 09:33:55.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053428: ['FBtr0086420'] 2021-10-25 09:33:55.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053428 has a single transcript. 2021-10-25 09:33:55.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053429: ['FBtr0086421'] 2021-10-25 09:33:55.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053429 has a single transcript. 2021-10-25 09:33:55.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053430: ['FBtr0086422'] 2021-10-25 09:33:55.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053430 has a single transcript. 2021-10-25 09:33:55.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053431: ['FBtr0086423'] 2021-10-25 09:33:55.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053431 has a single transcript. 2021-10-25 09:33:55.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036289: ['FBtr0075975'] 2021-10-25 09:33:55.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036289 has a single transcript. 2021-10-25 09:33:55.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261429: ['FBtr0302350', 'FBtr0335261'] 2021-10-25 09:33:55.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036290: ['FBtr0089321', 'FBtr0089322', 'FBtr0345350'] 2021-10-25 09:33:55.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053432: ['FBtr0086424'] 2021-10-25 09:33:55.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053432 has a single transcript. 2021-10-25 09:33:55.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053433: ['FBtr0086425'] 2021-10-25 09:33:55.295 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053433 has a single transcript. 2021-10-25 09:33:55.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053434: ['FBtr0086426'] 2021-10-25 09:33:55.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053434 has a single transcript. 2021-10-25 09:33:55.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053435: ['FBtr0086427'] 2021-10-25 09:33:55.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053435 has a single transcript. 2021-10-25 09:33:55.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053436: ['FBtr0086428'] 2021-10-25 09:33:55.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053436 has a single transcript. 2021-10-25 09:33:55.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5363495, 5364270), (5363495, 5364209), (5364375, 5364454), (5364576, 5364650), (5365205, 5365290), (5365560, 5365619), (5366092, 5366468), (5366737, 5366803)] 2021-10-25 09:33:55.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053437: ['FBtr0086429'] 2021-10-25 09:33:55.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053437 has a single transcript. 2021-10-25 09:33:55.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053438: ['FBtr0086430'] 2021-10-25 09:33:55.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053438 has a single transcript. 2021-10-25 09:33:55.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29864136, 29864194), (29864350, 29864412), (29864826, 29864888), (29864996, 29865056), (29865399, 29867989), (29865399, 29868714), (29865399, 29867179), (29865399, 29867743), (29865399, 29868643), (29865399, 29866515), (29865399, 29868532), (29865399, 29866100)] 2021-10-25 09:33:55.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053439: ['FBtr0086431'] 2021-10-25 09:33:55.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053439 has a single transcript. 2021-10-25 09:33:55.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12498687, 12498748), (12499264, 12499320), (12499488, 12501164), (12500152, 12500211), (12500554, 12500630), (12500800, 12500874), (12501042, 12501164)] 2021-10-25 09:33:55.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032753: ['FBtr0081173'] 2021-10-25 09:33:55.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032753 has a single transcript. 2021-10-25 09:33:55.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002567: ['FBtr0089931', 'FBtr0089932', 'FBtr0089933', 'FBtr0089934', 'FBtr0339369', 'FBtr0346635', 'FBtr0346636'] 2021-10-25 09:33:55.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053440: ['FBtr0086432'] 2021-10-25 09:33:55.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053440 has a single transcript. 2021-10-25 09:33:55.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032754: ['FBtr0081171'] 2021-10-25 09:33:55.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032754 has a single transcript. 2021-10-25 09:33:55.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053441: ['FBtr0086433'] 2021-10-25 09:33:55.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053441 has a single transcript. 2021-10-25 09:33:55.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032755: ['FBtr0081152'] 2021-10-25 09:33:55.381 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032755 has a single transcript. 2021-10-25 09:33:55.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053442: ['FBtr0086434'] 2021-10-25 09:33:55.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053442 has a single transcript. 2021-10-25 09:33:55.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032763: ['FBtr0081233'] 2021-10-25 09:33:55.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032763 has a single transcript. 2021-10-25 09:33:55.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261434: ['FBtr0078951'] 2021-10-25 09:33:55.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261434 has a single transcript. 2021-10-25 09:33:55.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053443: ['FBtr0086435'] 2021-10-25 09:33:55.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053443 has a single transcript. 2021-10-25 09:33:55.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032768: ['FBtr0081225'] 2021-10-25 09:33:55.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032768 has a single transcript. 2021-10-25 09:33:55.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261436: ['FBtr0078986'] 2021-10-25 09:33:55.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261436 has a single transcript. 2021-10-25 09:33:55.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053444: ['FBtr0086436'] 2021-10-25 09:33:55.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053444 has a single transcript. 2021-10-25 09:33:55.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027788: ['FBtr0088869'] 2021-10-25 09:33:55.409 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027788 has a single transcript. 2021-10-25 09:33:55.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032769: ['FBtr0081196', 'FBtr0343804'] 2021-10-25 09:33:55.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261437: ['FBtr0079646'] 2021-10-25 09:33:55.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261437 has a single transcript. 2021-10-25 09:33:55.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053445: ['FBtr0086437'] 2021-10-25 09:33:55.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053445 has a single transcript. 2021-10-25 09:33:55.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027790: ['FBtr0072784', 'FBtr0072785'] 2021-10-25 09:33:55.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053446: ['FBtr0086438'] 2021-10-25 09:33:55.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053446 has a single transcript. 2021-10-25 09:33:55.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261439: ['FBtr0086552', 'FBtr0086554', 'FBtr0086553'] 2021-10-25 09:33:55.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053447: ['FBtr0086439'] 2021-10-25 09:33:55.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053447 has a single transcript. 2021-10-25 09:33:55.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053448: ['FBtr0086440'] 2021-10-25 09:33:55.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053448 has a single transcript. 2021-10-25 09:33:55.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19300485, 19300547), (19301002, 19301057), (19301345, 19301399), (19301347, 19301401)] 2021-10-25 09:33:55.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053449: ['FBtr0086441'] 2021-10-25 09:33:55.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053449 has a single transcript. 2021-10-25 09:33:55.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1810719, 1812628), (1812684, 1821213), (1821419, 1821806), (1822098, 1822393)] 2021-10-25 09:33:55.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053450: ['FBtr0086442'] 2021-10-25 09:33:55.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053450 has a single transcript. 2021-10-25 09:33:55.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036291: ['FBtr0075957', 'FBtr0332634'] 2021-10-25 09:33:55.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267701: ['FBtr0347242'] 2021-10-25 09:33:55.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267701 has a single transcript. 2021-10-25 09:33:55.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053451: ['FBtr0086443'] 2021-10-25 09:33:55.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053451 has a single transcript. 2021-10-25 09:33:55.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267702: ['FBtr0347244'] 2021-10-25 09:33:55.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267702 has a single transcript. 2021-10-25 09:33:55.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053452: ['FBtr0086444'] 2021-10-25 09:33:55.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053452 has a single transcript. 2021-10-25 09:33:55.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267703: ['FBtr0347243'] 2021-10-25 09:33:55.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267703 has a single transcript. 2021-10-25 09:33:55.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19392578, 19392638), (19392789, 19392845), (19394443, 19395686), (19395777, 19395910), (19395777, 19395864)] 2021-10-25 09:33:55.499 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19395686, 19395971, 'FBtr0086553_exon_1') contains intron (19395777, 19395910) 2021-10-25 09:33:55.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086553_exon_1'] 2021-10-25 09:33:55.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053453: ['FBtr0086564', 'FBtr0340471'] 2021-10-25 09:33:55.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267704: ['FBtr0347221', 'FBtr0347222', 'FBtr0347223', 'FBtr0347224', 'FBtr0347225', 'FBtr0347226', 'FBtr0347227', 'FBtr0347467', 'FBtr0347468', 'FBtr0347469'] 2021-10-25 09:33:55.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12501718, 12501774), (12501722, 12501774), (12501947, 12502003)] 2021-10-25 09:33:55.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032770: ['FBtr0081197', 'FBtr0336817', 'FBtr0336818'] 2021-10-25 09:33:55.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027791: ['FBtr0070296'] 2021-10-25 09:33:55.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027791 has a single transcript. 2021-10-25 09:33:55.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027793: ['FBtr0070298'] 2021-10-25 09:33:55.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027793 has a single transcript. 2021-10-25 09:33:55.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9178544, 9178605), (9178749, 9178829), (9179225, 9186115), (9179225, 9181436), (9179225, 9179748), (9179225, 9185216), (9185924, 9186115)] 2021-10-25 09:33:55.537 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9185216, 9186342, 'FBtr0089934_exon_1') contains intron (9185924, 9186115) 2021-10-25 09:33:55.537 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089934_exon_1'] 2021-10-25 09:33:55.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027794: ['FBtr0070230'] 2021-10-25 09:33:55.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027794 has a single transcript. 2021-10-25 09:33:55.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19252691, 19252752), (19252691, 19252755), (19253070, 19253119), (19253070, 19253125)] 2021-10-25 09:33:55.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027795: ['FBtr0070231'] 2021-10-25 09:33:55.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027795 has a single transcript. 2021-10-25 09:33:55.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027835: ['FBtr0086679', 'FBtr0086680', 'FBtr0086681', 'FBtr0086682', 'FBtr0086683', 'FBtr0340329', 'FBtr0345226'] 2021-10-25 09:33:55.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036292: ['FBtr0075972'] 2021-10-25 09:33:55.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036292 has a single transcript. 2021-10-25 09:33:55.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036294: ['FBtr0075971', 'FBtr0332644'] 2021-10-25 09:33:55.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19364522, 19364973), (19364567, 19364973)] 2021-10-25 09:33:55.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.582 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053454: ['FBtr0086565'] 2021-10-25 09:33:55.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053454 has a single transcript. 2021-10-25 09:33:55.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261444: ['FBtr0070249', 'FBtr0330205', 'FBtr0330206', 'FBtr0330207', 'FBtr0308707', 'FBtr0336978', 'FBtr0346960', 'FBtr0347011'] 2021-10-25 09:33:55.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053458: ['FBtr0087085'] 2021-10-25 09:33:55.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053458 has a single transcript. 2021-10-25 09:33:55.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053459: ['FBtr0089859'] 2021-10-25 09:33:55.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053459 has a single transcript. 2021-10-25 09:33:55.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12506487, 12507149), (12506487, 12507227)] 2021-10-25 09:33:55.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053460: ['FBtr0100642'] 2021-10-25 09:33:55.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053460 has a single transcript. 2021-10-25 09:33:55.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053461: ['FBtr0302528'] 2021-10-25 09:33:55.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053461 has a single transcript. 2021-10-25 09:33:55.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053462: ['FBtr0087284'] 2021-10-25 09:33:55.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053462 has a single transcript. 2021-10-25 09:33:55.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053463: ['FBtr0087301'] 2021-10-25 09:33:55.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053463 has a single transcript. 2021-10-25 09:33:55.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053465: ['FBtr0301048'] 2021-10-25 09:33:55.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053465 has a single transcript. 2021-10-25 09:33:55.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032771: ['FBtr0081198'] 2021-10-25 09:33:55.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032771 has a single transcript. 2021-10-25 09:33:55.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053467: ['FBtr0089861', 'FBtr0339992'] 2021-10-25 09:33:55.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036298: ['FBtr0075967'] 2021-10-25 09:33:55.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036298 has a single transcript. 2021-10-25 09:33:55.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032772: ['FBtr0081199'] 2021-10-25 09:33:55.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032772 has a single transcript. 2021-10-25 09:33:55.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032773: ['FBtr0081222', 'FBtr0081223', 'FBtr0301287', 'FBtr0336819'] 2021-10-25 09:33:55.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036299: ['FBtr0075966'] 2021-10-25 09:33:55.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036299 has a single transcript. 2021-10-25 09:33:55.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036300: ['FBtr0075961'] 2021-10-25 09:33:55.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036300 has a single transcript. 2021-10-25 09:33:55.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036301: ['FBtr0075965'] 2021-10-25 09:33:55.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036301 has a single transcript. 2021-10-25 09:33:55.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18412056, 18413001), (18412056, 18413004), (18412356, 18413001), (18413077, 18413325), (18413077, 18415198), (18413077, 18414828), (18413429, 18415198), (18414587, 18415198), (18414933, 18415198), (18415286, 18415344), (18415595, 18415662), (18417516, 18417576), (18418965, 18419050)] 2021-10-25 09:33:55.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039718: ['FBtr0085515'] 2021-10-25 09:33:55.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039718 has a single transcript. 2021-10-25 09:33:55.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21632322, 21633958), (21632322, 21636088), (21632322, 21633037), (21632472, 21790631), (21633080, 21633958), (21633999, 21635747), (21634066, 21669662), (21634106, 21636088), (21634106, 21669662), (21634106, 21723532), (21634106, 21637824), (21635801, 21636088)] 2021-10-25 09:33:55.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15055685, 15055749), (15055691, 15055749), (15055920, 15055976), (15056132, 15056190)] 2021-10-25 09:33:55.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.729 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036302: ['FBtr0332042', 'FBtr0300887', 'FBtr0300888', 'FBtr0300889'] 2021-10-25 09:33:55.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039719: ['FBtr0332429'] 2021-10-25 09:33:55.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039719 has a single transcript. 2021-10-25 09:33:55.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039722: ['FBtr0085514'] 2021-10-25 09:33:55.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039722 has a single transcript. 2021-10-25 09:33:55.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039723: ['FBtr0085503', 'FBtr0331355'] 2021-10-25 09:33:55.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19383762, 19383880), (19385354, 19385669), (19385363, 19385779), (19385363, 19385669), (19385705, 19385779), (19385792, 19386086)] 2021-10-25 09:33:55.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1221595, 1222643), (1221595, 1222748), (1221595, 1222484), (1223012, 1223087), (1223360, 1223435), (1223554, 1223622), (1223874, 1223935), (1224163, 1225433), (1225528, 1226104), (1226282, 1226845), (1226282, 1233802), (1226893, 1233802), (1234276, 1236444), (1234279, 1236433), (1234279, 1236444), (1234279, 1234753)] 2021-10-25 09:33:55.786 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053468: ['FBtr0087503'] 2021-10-25 09:33:55.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053468 has a single transcript. 2021-10-25 09:33:55.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053469: ['FBtr0087504', 'FBtr0339979'] 2021-10-25 09:33:55.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29927517, 29927869), (29927797, 29927869), (29928121, 29928180)] 2021-10-25 09:33:55.798 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002569: ['FBtr0088747'] 2021-10-25 09:33:55.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002569 has a single transcript. 2021-10-25 09:33:55.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002570: ['FBtr0088759'] 2021-10-25 09:33:55.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002570 has a single transcript. 2021-10-25 09:33:55.811 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330205': ['FBtr0347011'], 'FBtr0330206': ['FBtr0346960']} 2021-10-25 09:33:55.811 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0347011'], ['FBtr0346960']] 2021-10-25 09:33:55.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002571: ['FBtr0088758'] 2021-10-25 09:33:55.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002571 has a single transcript. 2021-10-25 09:33:55.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12538488, 12538549), (12538576, 12540056), (12538576, 12538995), (12538576, 12539621), (12539041, 12540056), (12540146, 12540389), (12540462, 12541181), (12541187, 12541287), (12541377, 12544318), (12544321, 12545402), (12545405, 12548484), (12548496, 12564898), (12565039, 12571538), (12572200, 12572311)] 2021-10-25 09:33:55.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002573: ['FBtr0075862'] 2021-10-25 09:33:55.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002573 has a single transcript. 2021-10-25 09:33:55.844 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14606192, 14606243)] 2021-10-25 09:33:55.845 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14605651, 14606302, 'FBtr0087504_exon_1') contains intron (14606192, 14606243) 2021-10-25 09:33:55.845 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087504_exon_1'] 2021-10-25 09:33:55.845 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002576: ['FBtr0071320', 'FBtr0112814'] 2021-10-25 09:33:55.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039726: ['FBtr0085508'] 2021-10-25 09:33:55.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039726 has a single transcript. 2021-10-25 09:33:55.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039727: ['FBtr0085505', 'FBtr0300825'] 2021-10-25 09:33:55.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9284736, 9285786), (9286782, 9288331), (9288571, 9293905), (9294019, 9295276), (9294019, 9301969), (9295639, 9301969)] 2021-10-25 09:33:55.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053470: ['FBtr0087656', 'FBtr0303099'] 2021-10-25 09:33:55.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29937457, 29937514), (29937811, 29937860), (29938862, 29938919), (29939623, 29939679), (29939878, 29939936), (29940556, 29940615), (29942480, 29942540), (29942697, 29942759), (29942981, 29943041), (29944075, 29944136), (29944496, 29944552), (29945311, 29945368), (29945853, 29945913), (29947856, 29947914)] 2021-10-25 09:33:55.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29937514, 29938862, 'FBtr0085505_exon_2') contains intron (29937811, 29937860) 2021-10-25 09:33:55.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085505_exon_2'] 2021-10-25 09:33:55.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032774: ['FBtr0081219', 'FBtr0081220', 'FBtr0081221', 'FBtr0300823', 'FBtr0310645'] 2021-10-25 09:33:55.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13411821, 13411894), (13412107, 13412166), (13412669, 13412725)] 2021-10-25 09:33:55.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:55.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:55.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002577: ['FBtr0073555'] 2021-10-25 09:33:55.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002577 has a single transcript. 2021-10-25 09:33:55.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002578: ['FBtr0084957', 'FBtr0310083'] 2021-10-25 09:33:55.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039728: ['FBtr0085545'] 2021-10-25 09:33:55.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039728 has a single transcript. 2021-10-25 09:33:55.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036305: ['FBtr0075919', 'FBtr0075920', 'FBtr0075921', 'FBtr0331554'] 2021-10-25 09:33:55.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039730: ['FBtr0085608', 'FBtr0334707'] 2021-10-25 09:33:56.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027836: ['FBtr0086773', 'FBtr0086774'] 2021-10-25 09:33:56.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053471: ['FBtr0088081'] 2021-10-25 09:33:56.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053471 has a single transcript. 2021-10-25 09:33:56.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26015026, 26015088)] 2021-10-25 09:33:56.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053474: ['FBtr0088260', 'FBtr0345937'] 2021-10-25 09:33:56.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261445: ['FBtr0076938'] 2021-10-25 09:33:56.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261445 has a single transcript. 2021-10-25 09:33:56.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261446: ['FBtr0070106', 'FBtr0332990'] 2021-10-25 09:33:56.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19387391, 19387537), (19387769, 19387861), (19387769, 19388039), (19387936, 19388039), (19388313, 19388473), (19388569, 19389926), (19388569, 19389935), (19388569, 19389764)] 2021-10-25 09:33:56.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29993813, 29993872), (29994088, 29994147), (29994733, 29994792), (29994739, 29994792), (29995078, 29995149)] 2021-10-25 09:33:56.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18170257, 18170314), (18170657, 18170717), (18170898, 18170967), (18171319, 18172437), (18171319, 18171392)] 2021-10-25 09:33:56.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:56.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12750201, 12750603), (12750344, 12750603), (12750739, 12750801), (12750739, 12751306), (12750855, 12751306), (12752922, 12752983)] 2021-10-25 09:33:56.076 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(258828, 258892), (259671, 263861), (259671, 263667)] 2021-10-25 09:33:56.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002579: ['FBtr0070155', 'FBtr0070156', 'FBtr0070157', 'FBtr0070158', 'FBtr0345321'] 2021-10-25 09:33:56.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039731: ['FBtr0085546'] 2021-10-25 09:33:56.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039731 has a single transcript. 2021-10-25 09:33:56.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027841: ['FBtr0083660'] 2021-10-25 09:33:56.112 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027841 has a single transcript. 2021-10-25 09:33:56.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039732: ['FBtr0085607'] 2021-10-25 09:33:56.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039732 has a single transcript. 2021-10-25 09:33:56.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027843: ['FBtr0076001', 'FBtr0333381'] 2021-10-25 09:33:56.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039733: ['FBtr0085547', 'FBtr0085548', 'FBtr0085549'] 2021-10-25 09:33:56.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053475: ['FBtr0088318'] 2021-10-25 09:33:56.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053475 has a single transcript. 2021-10-25 09:33:56.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261452: ['FBtr0309753'] 2021-10-25 09:33:56.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261452 has a single transcript. 2021-10-25 09:33:56.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053476: ['FBtr0088319'] 2021-10-25 09:33:56.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053476 has a single transcript. 2021-10-25 09:33:56.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261453: ['FBtr0309754'] 2021-10-25 09:33:56.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267705: ['FBtr0347272'] 2021-10-25 09:33:56.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267705 has a single transcript. 2021-10-25 09:33:56.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261453 has a single transcript. 2021-10-25 09:33:56.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053477: ['FBtr0088320'] 2021-10-25 09:33:56.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053477 has a single transcript. 2021-10-25 09:33:56.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261454: ['FBtr0309755'] 2021-10-25 09:33:56.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261454 has a single transcript. 2021-10-25 09:33:56.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267706: ['FBtr0347245'] 2021-10-25 09:33:56.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267706 has a single transcript. 2021-10-25 09:33:56.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053481: ['FBtr0334408', 'FBtr0334409'] 2021-10-25 09:33:56.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12177669, 12181675), (12180155, 12181675), (12182148, 12182209), (12182437, 12182498)] 2021-10-25 09:33:56.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267707: ['FBtr0347246'] 2021-10-25 09:33:56.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267707 has a single transcript. 2021-10-25 09:33:56.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261455: ['FBtr0309756'] 2021-10-25 09:33:56.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261455 has a single transcript. 2021-10-25 09:33:56.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267708: ['FBtr0347247'] 2021-10-25 09:33:56.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267708 has a single transcript. 2021-10-25 09:33:56.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261456: ['FBtr0086500', 'FBtr0331920'] 2021-10-25 09:33:56.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267709: ['FBtr0347248', 'FBtr0347249'] 2021-10-25 09:33:56.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29998206, 29998274), (29998206, 29998270)] 2021-10-25 09:33:56.189 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29997899, 29999755, 'FBtr0085547_exon_1') contains intron (29998206, 29998274) 2021-10-25 09:33:56.189 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085547_exon_1'] 2021-10-25 09:33:56.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.196 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(247228, 249556), (249735, 249789), (249977, 250033), (250136, 250189), (250243, 251314), (251525, 252054), (252170, 252658), (252170, 252823), (252711, 252823), (253013, 253200)] 2021-10-25 09:33:56.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (252823, 253329, 'FBtr0334409_exon_1') contains intron (253013, 253200) 2021-10-25 09:33:56.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334409_exon_1'] 2021-10-25 09:33:56.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(628686, 628750), (628878, 629327), (628878, 629381), (628878, 629290), (628878, 629347)] 2021-10-25 09:33:56.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036306: ['FBtr0100354'] 2021-10-25 09:33:56.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036306 has a single transcript. 2021-10-25 09:33:56.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036309: ['FBtr0075948', 'FBtr0075949'] 2021-10-25 09:33:56.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032775: ['FBtr0081216', 'FBtr0081217', 'FBtr0081218', 'FBtr0300822'] 2021-10-25 09:33:56.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027844: ['FBtr0080539'] 2021-10-25 09:33:56.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027844 has a single transcript. 2021-10-25 09:33:56.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19942268, 19942327), (19942268, 19942331)] 2021-10-25 09:33:56.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19495403, 19495460)] 2021-10-25 09:33:56.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027864: ['FBtr0071223'] 2021-10-25 09:33:56.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027864 has a single transcript. 2021-10-25 09:33:56.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027865: ['FBtr0084912', 'FBtr0330163', 'FBtr0330164'] 2021-10-25 09:33:56.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053483: ['FBtr0089295', 'FBtr0303425'] 2021-10-25 09:33:56.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12769374, 12769431), (12769836, 12769902), (12770338, 12770394), (12771141, 12771205), (12771315, 12771371), (12772102, 12772161), (12772583, 12773274), (12772583, 12772743)] 2021-10-25 09:33:56.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039734: ['FBtr0085550', 'FBtr0085551'] 2021-10-25 09:33:56.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267710: ['FBtr0347250'] 2021-10-25 09:33:56.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267710 has a single transcript. 2021-10-25 09:33:56.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267711: ['FBtr0347251'] 2021-10-25 09:33:56.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267711 has a single transcript. 2021-10-25 09:33:56.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267712: ['FBtr0347252'] 2021-10-25 09:33:56.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267712 has a single transcript. 2021-10-25 09:33:56.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30900873, 30900933), (30901101, 30901166), (30901322, 30901862), (30901322, 30901375), (30902018, 30902069)] 2021-10-25 09:33:56.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261458: ['FBtr0100023', 'FBtr0100022', 'FBtr0332274'] 2021-10-25 09:33:56.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267713: ['FBtr0347253'] 2021-10-25 09:33:56.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267713 has a single transcript. 2021-10-25 09:33:56.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267714: ['FBtr0347229'] 2021-10-25 09:33:56.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267714 has a single transcript. 2021-10-25 09:33:56.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25875239, 25875658), (25875874, 25875944), (25876124, 25876531), (25876726, 25881015)] 2021-10-25 09:33:56.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19391219, 19391437), (19391783, 19391838), (19391964, 19392065), (19392989, 19393496), (19393656, 19398334), (19393656, 19398346), (19393656, 19393767), (19393656, 19398350)] 2021-10-25 09:33:56.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267715: ['FBtr0347254'] 2021-10-25 09:33:56.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267715 has a single transcript. 2021-10-25 09:33:56.327 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084912': ['FBtr0330163']} 2021-10-25 09:33:56.327 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330163']] 2021-10-25 09:33:56.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30000661, 30000726), (30000966, 30001024), (30001458, 30001511), (30001706, 30002150), (30001706, 30001824), (30001963, 30002150), (30002386, 30002446), (30003010, 30003072), (30003178, 30003251), (30003414, 30003479)] 2021-10-25 09:33:56.330 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30001024, 30001706, 'FBtr0085550_exon_3') contains intron (30001458, 30001511) 2021-10-25 09:33:56.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085550_exon_3'] 2021-10-25 09:33:56.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267716: ['FBtr0347255'] 2021-10-25 09:33:56.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267716 has a single transcript. 2021-10-25 09:33:56.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036310: ['FBtr0075946'] 2021-10-25 09:33:56.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036310 has a single transcript. 2021-10-25 09:33:56.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267717: ['FBtr0347256'] 2021-10-25 09:33:56.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267717 has a single transcript. 2021-10-25 09:33:56.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036311: ['FBtr0075923', 'FBtr0075924'] 2021-10-25 09:33:56.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267719: ['FBtr0347259'] 2021-10-25 09:33:56.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267719 has a single transcript. 2021-10-25 09:33:56.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267720: ['FBtr0347260'] 2021-10-25 09:33:56.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267720 has a single transcript. 2021-10-25 09:33:56.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267721: ['FBtr0347261'] 2021-10-25 09:33:56.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267721 has a single transcript. 2021-10-25 09:33:56.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053487: ['FBtr0344319'] 2021-10-25 09:33:56.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053487 has a single transcript. 2021-10-25 09:33:56.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267722: ['FBtr0347262'] 2021-10-25 09:33:56.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267722 has a single transcript. 2021-10-25 09:33:56.370 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1152115, 1152176), (1152700, 1152770), (1153318, 1153385), (1153731, 1158078), (1153731, 1154281), (1153731, 1155745), (1154406, 1154551), (1155053, 1155745)] 2021-10-25 09:33:56.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027866: ['FBtr0078956', 'FBtr0078955'] 2021-10-25 09:33:56.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053489: ['FBtr0089525', 'FBtr0333216'] 2021-10-25 09:33:56.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267723: ['FBtr0347263'] 2021-10-25 09:33:56.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267723 has a single transcript. 2021-10-25 09:33:56.380 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12781517, 12781574), (12783269, 12783387), (12783690, 12783744)] 2021-10-25 09:33:56.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267724: ['FBtr0347264'] 2021-10-25 09:33:56.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267724 has a single transcript. 2021-10-25 09:33:56.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039735: ['FBtr0085606', 'FBtr0113308'] 2021-10-25 09:33:56.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267725: ['FBtr0347273'] 2021-10-25 09:33:56.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267725 has a single transcript. 2021-10-25 09:33:56.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002590: ['FBtr0074406', 'FBtr0343292', 'FBtr0343293', 'FBtr0345132'] 2021-10-25 09:33:56.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267726: ['FBtr0347275', 'FBtr0347276', 'FBtr0347277'] 2021-10-25 09:33:56.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4328017, 4328136), (4330034, 4330099), (4330248, 4331546), (4330248, 4331001), (4332224, 4332289), (4332477, 4332991), (4333159, 4333221)] 2021-10-25 09:33:56.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11575630, 11575840), (11576017, 11576337)] 2021-10-25 09:33:56.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30003904, 30003989), (30004157, 30004303), (30004449, 30004581)] 2021-10-25 09:33:56.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036314: ['FBtr0075944'] 2021-10-25 09:33:56.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036314 has a single transcript. 2021-10-25 09:33:56.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032779: ['FBtr0081204', 'FBtr0302874', 'FBtr0302938', 'FBtr0334164', 'FBtr0334165'] 2021-10-25 09:33:56.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036316: ['FBtr0075941', 'FBtr0075942', 'FBtr0075943'] 2021-10-25 09:33:56.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19183338, 19183387), (19183338, 19183391), (19183452, 19183511), (19183461, 19183511)] 2021-10-25 09:33:56.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027868: ['FBtr0080121'] 2021-10-25 09:33:56.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053490: ['FBtr0089526'] 2021-10-25 09:33:56.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027868 has a single transcript. 2021-10-25 09:33:56.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053490 has a single transcript. 2021-10-25 09:33:56.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053491: ['FBtr0344321'] 2021-10-25 09:33:56.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053491 has a single transcript. 2021-10-25 09:33:56.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027872: ['FBtr0086888'] 2021-10-25 09:33:56.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027872 has a single transcript. 2021-10-25 09:33:56.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261461: ['FBtr0299622', 'FBtr0299625', 'FBtr0299623', 'FBtr0299624', 'FBtr0339261'] 2021-10-25 09:33:56.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027873: ['FBtr0085357'] 2021-10-25 09:33:56.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027873 has a single transcript. 2021-10-25 09:33:56.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053493: ['FBtr0089606', 'FBtr0331576'] 2021-10-25 09:33:56.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17143771, 17144617), (17144716, 17145015), (17145132, 17146797), (17147200, 17148203), (17147200, 17147687), (17147200, 17148056)] 2021-10-25 09:33:56.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039736: ['FBtr0085605'] 2021-10-25 09:33:56.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039736 has a single transcript. 2021-10-25 09:33:56.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027885: ['FBtr0081001'] 2021-10-25 09:33:56.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027885 has a single transcript. 2021-10-25 09:33:56.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027889: ['FBtr0085095', 'FBtr0085096'] 2021-10-25 09:33:56.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039737: ['FBtr0085603', 'FBtr0334706'] 2021-10-25 09:33:56.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12826305, 12826375), (12826627, 12826961), (12827582, 12835311), (12827582, 12827788), (12827582, 12831882), (12835349, 12842779)] 2021-10-25 09:33:56.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10692808, 10692888)] 2021-10-25 09:33:56.532 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10692575, 10693167, 'FBtr0089606_exon_1') contains intron (10692808, 10692888) 2021-10-25 09:33:56.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089606_exon_1'] 2021-10-25 09:33:56.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19424212, 19427208), (19424212, 19424268), (19424809, 19427208), (19426698, 19427208), (19426894, 19427208), (19427120, 19427208)] 2021-10-25 09:33:56.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26866234, 26866290), (26866655, 26866775)] 2021-10-25 09:33:56.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30011117, 30011202), (30011607, 30011668), (30012061, 30014814)] 2021-10-25 09:33:56.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267727: ['FBtr0079937'] 2021-10-25 09:33:56.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267727 has a single transcript. 2021-10-25 09:33:56.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267728: ['FBtr0088027'] 2021-10-25 09:33:56.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267728 has a single transcript. 2021-10-25 09:33:56.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19136605, 19143472), (19143768, 19144004), (19144496, 19144563), (19144591, 19145967), (19146142, 19150810), (19146142, 19164150), (19151959, 19153027), (19155001, 19158119), (19164700, 19166856), (19164700, 19165219)] 2021-10-25 09:33:56.583 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19164150, 19165347, 'FBtr0299622_exon_1') contains intron (19164700, 19165219) 2021-10-25 09:33:56.584 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299622_exon_1'] 2021-10-25 09:33:56.584 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267729: ['FBtr0347307'] 2021-10-25 09:33:56.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267729 has a single transcript. 2021-10-25 09:33:56.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053494: ['FBtr0089607', 'FBtr0336802'] 2021-10-25 09:33:56.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267730: ['FBtr0347496', 'FBtr0347308'] 2021-10-25 09:33:56.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027903: ['FBtr0072775'] 2021-10-25 09:33:56.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027903 has a single transcript. 2021-10-25 09:33:56.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039738: ['FBtr0085602', 'FBtr0100418', 'FBtr0334705'] 2021-10-25 09:33:56.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036317: ['FBtr0075938', 'FBtr0075939', 'FBtr0273237'] 2021-10-25 09:33:56.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027929: ['FBtr0080585', 'FBtr0310074'] 2021-10-25 09:33:56.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25494078, 25494214), (25494420, 25495116)] 2021-10-25 09:33:56.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26235606, 26235655), (26235809, 26251329), (26235809, 26239350)] 2021-10-25 09:33:56.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002592: ['FBtr0084981'] 2021-10-25 09:33:56.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002592 has a single transcript. 2021-10-25 09:33:56.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13963738, 13963898), (13964456, 13964534), (13964738, 13964796), (13964738, 13964793)] 2021-10-25 09:33:56.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002593: ['FBtr0078056', 'FBtr0331932'] 2021-10-25 09:33:56.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12844924, 12845056), (12845668, 12845733), (12845853, 12847049), (12845853, 12848369), (12847156, 12848369), (12849095, 12849157), (12849739, 12850031)] 2021-10-25 09:33:56.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.684 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30016594, 30016659), (30016874, 30017624), (30016874, 30018265), (30016874, 30017137), (30017200, 30018265), (30017984, 30018265), (30018426, 30018487), (30018633, 30018690), (30019117, 30019181), (30019331, 30019388), (30019517, 30019594), (30019683, 30021649), (30019683, 30021948)] 2021-10-25 09:33:56.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053496: ['FBtr0344320'] 2021-10-25 09:33:56.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053496 has a single transcript. 2021-10-25 09:33:56.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267731: ['FBtr0347309'] 2021-10-25 09:33:56.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267731 has a single transcript. 2021-10-25 09:33:56.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053497: ['FBtr0089610', 'FBtr0345925', 'FBtr0345926'] 2021-10-25 09:33:56.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267732: ['FBtr0347292'] 2021-10-25 09:33:56.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267732 has a single transcript. 2021-10-25 09:33:56.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027930: ['FBtr0078903', 'FBtr0300936', 'FBtr0445313'] 2021-10-25 09:33:56.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(420146, 420291)] 2021-10-25 09:33:56.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267733: ['FBtr0347293'] 2021-10-25 09:33:56.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267733 has a single transcript. 2021-10-25 09:33:56.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032780: ['FBtr0081203', 'FBtr0335465'] 2021-10-25 09:33:56.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267734: ['FBtr0347294'] 2021-10-25 09:33:56.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267734 has a single transcript. 2021-10-25 09:33:56.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267735: ['FBtr0347295'] 2021-10-25 09:33:56.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267735 has a single transcript. 2021-10-25 09:33:56.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267736: ['FBtr0347296'] 2021-10-25 09:33:56.759 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267736 has a single transcript. 2021-10-25 09:33:56.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261477: ['FBtr0086693', 'FBtr0331958'] 2021-10-25 09:33:56.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267737: ['FBtr0347297'] 2021-10-25 09:33:56.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267737 has a single transcript. 2021-10-25 09:33:56.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4308056, 4308263), (4308427, 4308589), (4308427, 4308619), (4308454, 4308619), (4308833, 4308894)] 2021-10-25 09:33:56.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19424212, 19429401), (19426698, 19429401)] 2021-10-25 09:33:56.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002609: ['FBtr0084958'] 2021-10-25 09:33:56.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002609 has a single transcript. 2021-10-25 09:33:56.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20182691, 20182758), (20183681, 20184059), (20184212, 20186144), (20184236, 20186144), (20186272, 20186340)] 2021-10-25 09:33:56.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267738: ['FBtr0347298'] 2021-10-25 09:33:56.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267738 has a single transcript. 2021-10-25 09:33:56.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267739: ['FBtr0347299'] 2021-10-25 09:33:56.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267739 has a single transcript. 2021-10-25 09:33:56.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002622: ['FBtr0084410', 'FBtr0346349'] 2021-10-25 09:33:56.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036318: ['FBtr0332045', 'FBtr0332046', 'FBtr0332047', 'FBtr0332048', 'FBtr0273240', 'FBtr0273241'] 2021-10-25 09:33:56.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039739: ['FBtr0085601'] 2021-10-25 09:33:56.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039739 has a single transcript. 2021-10-25 09:33:56.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267740: ['FBtr0347300'] 2021-10-25 09:33:56.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267740 has a single transcript. 2021-10-25 09:33:56.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039740: ['FBtr0085600'] 2021-10-25 09:33:56.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039740 has a single transcript. 2021-10-25 09:33:56.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267741: ['FBtr0347301'] 2021-10-25 09:33:56.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267741 has a single transcript. 2021-10-25 09:33:56.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18442313, 18443654), (18444212, 18444352)] 2021-10-25 09:33:56.808 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267742: ['FBtr0347310'] 2021-10-25 09:33:56.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267742 has a single transcript. 2021-10-25 09:33:56.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039741: ['FBtr0085559', 'FBtr0085560'] 2021-10-25 09:33:56.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267743: ['FBtr0347303'] 2021-10-25 09:33:56.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267743 has a single transcript. 2021-10-25 09:33:56.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032781: ['FBtr0081205'] 2021-10-25 09:33:56.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032781 has a single transcript. 2021-10-25 09:33:56.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23358890, 23359153)] 2021-10-25 09:33:56.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032782: ['FBtr0081206'] 2021-10-25 09:33:56.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032782 has a single transcript. 2021-10-25 09:33:56.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267744: ['FBtr0347304'] 2021-10-25 09:33:56.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267744 has a single transcript. 2021-10-25 09:33:56.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267745: ['FBtr0347311'] 2021-10-25 09:33:56.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267745 has a single transcript. 2021-10-25 09:33:56.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032783: ['FBtr0081207', 'FBtr0081208', 'FBtr0081209', 'FBtr0308679', 'FBtr0334176'] 2021-10-25 09:33:56.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30047643, 30047706), (30047836, 30047903)] 2021-10-25 09:33:56.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.849 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267746: ['FBtr0347315'] 2021-10-25 09:33:56.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267746 has a single transcript. 2021-10-25 09:33:56.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267747: ['FBtr0347314'] 2021-10-25 09:33:56.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267747 has a single transcript. 2021-10-25 09:33:56.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267748: ['FBtr0347313'] 2021-10-25 09:33:56.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267748 has a single transcript. 2021-10-25 09:33:56.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261479: ['FBtr0085863'] 2021-10-25 09:33:56.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261479 has a single transcript. 2021-10-25 09:33:56.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027932: ['FBtr0079664', 'FBtr0079665', 'FBtr0079666', 'FBtr0079667', 'FBtr0340239', 'FBtr0340240', 'FBtr0340241'] 2021-10-25 09:33:56.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267749: ['FBtr0347312'] 2021-10-25 09:33:56.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267749 has a single transcript. 2021-10-25 09:33:56.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261501: ['FBtr0302392'] 2021-10-25 09:33:56.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261501 has a single transcript. 2021-10-25 09:33:56.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053498: ['FBtr0344318'] 2021-10-25 09:33:56.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053498 has a single transcript. 2021-10-25 09:33:56.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053499: ['FBtr0346678'] 2021-10-25 09:33:56.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053499 has a single transcript. 2021-10-25 09:33:56.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261502: ['FBtr0302394'] 2021-10-25 09:33:56.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261502 has a single transcript. 2021-10-25 09:33:56.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002626: ['FBtr0085592', 'FBtr0085593', 'FBtr0085594', 'FBtr0114555'] 2021-10-25 09:33:56.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267750: ['FBtr0347305'] 2021-10-25 09:33:56.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267750 has a single transcript. 2021-10-25 09:33:56.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053500: ['FBtr0076094'] 2021-10-25 09:33:56.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053500 has a single transcript. 2021-10-25 09:33:56.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261503: ['FBtr0334273'] 2021-10-25 09:33:56.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261503 has a single transcript. 2021-10-25 09:33:56.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267751: ['FBtr0347306'] 2021-10-25 09:33:56.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267751 has a single transcript. 2021-10-25 09:33:56.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039742: ['FBtr0303240'] 2021-10-25 09:33:56.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039742 has a single transcript. 2021-10-25 09:33:56.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053502: ['FBtr0070055'] 2021-10-25 09:33:56.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053502 has a single transcript. 2021-10-25 09:33:56.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261504: ['FBtr0302398'] 2021-10-25 09:33:56.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261504 has a single transcript. 2021-10-25 09:33:56.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053503: ['FBtr0089418'] 2021-10-25 09:33:56.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053503 has a single transcript. 2021-10-25 09:33:56.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267752: ['FBtr0347316'] 2021-10-25 09:33:56.911 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267752 has a single transcript. 2021-10-25 09:33:56.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039743: ['FBtr0085561', 'FBtr0310420'] 2021-10-25 09:33:56.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12850331, 12850497), (12850797, 12850914), (12851153, 12851308), (12851153, 12852231), (12851153, 12852426), (12851722, 12852231), (12851722, 12852615), (12851722, 12851805), (12852277, 12852426), (12852277, 12852615), (12852521, 12852615), (12852528, 12852615), (12852716, 12852780)] 2021-10-25 09:33:56.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053504: ['FBtr0100848'] 2021-10-25 09:33:56.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053504 has a single transcript. 2021-10-25 09:33:56.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267753: ['FBtr0347317'] 2021-10-25 09:33:56.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267753 has a single transcript. 2021-10-25 09:33:56.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261505: ['FBtr0302396', 'FBtr0334741'] 2021-10-25 09:33:56.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053505: ['FBtr0091445'] 2021-10-25 09:33:56.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053505 has a single transcript. 2021-10-25 09:33:56.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267754: ['FBtr0347318'] 2021-10-25 09:33:56.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267754 has a single transcript. 2021-10-25 09:33:56.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053506: ['FBtr0091446'] 2021-10-25 09:33:56.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053506 has a single transcript. 2021-10-25 09:33:56.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053508: ['FBtr0091448'] 2021-10-25 09:33:56.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053508 has a single transcript. 2021-10-25 09:33:56.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267755: ['FBtr0347319'] 2021-10-25 09:33:56.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267755 has a single transcript. 2021-10-25 09:33:56.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053509: ['FBtr0091449'] 2021-10-25 09:33:56.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053509 has a single transcript. 2021-10-25 09:33:56.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19436633, 19436809), (19436963, 19437031), (19437126, 19437665), (19437845, 19438008), (19437845, 19440663), (19437845, 19441158), (19438133, 19438886), (19438133, 19438293), (19441276, 19442338)] 2021-10-25 09:33:56.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267756: ['FBtr0347320'] 2021-10-25 09:33:56.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267756 has a single transcript. 2021-10-25 09:33:56.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053510: ['FBtr0300360'] 2021-10-25 09:33:56.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053510 has a single transcript. 2021-10-25 09:33:56.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30053464, 30053543), (30054346, 30054409)] 2021-10-25 09:33:56.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.962 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1207613, 1207918), (1207843, 1207918), (1208149, 1208258), (1208447, 1208564)] 2021-10-25 09:33:56.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053511: ['FBtr0346727'] 2021-10-25 09:33:56.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053511 has a single transcript. 2021-10-25 09:33:56.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267757: ['FBtr0347321'] 2021-10-25 09:33:56.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267757 has a single transcript. 2021-10-25 09:33:56.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053512: ['FBtr0300491'] 2021-10-25 09:33:56.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053512 has a single transcript. 2021-10-25 09:33:56.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30045624, 30045686), (30045786, 30045986), (30045786, 30045889), (30045786, 30046133), (30045786, 30045861)] 2021-10-25 09:33:56.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:56.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:56.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267758: ['FBtr0347322'] 2021-10-25 09:33:56.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267758 has a single transcript. 2021-10-25 09:33:56.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267759: ['FBtr0347323'] 2021-10-25 09:33:56.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267759 has a single transcript. 2021-10-25 09:33:56.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053513: ['FBtr0091453', 'FBtr0091454', 'FBtr0070288', 'FBtr0301842', 'FBtr0301843', 'FBtr0301844', 'FBtr0339592'] 2021-10-25 09:33:57.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267760: ['FBtr0347324'] 2021-10-25 09:33:57.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267760 has a single transcript. 2021-10-25 09:33:57.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267761: ['FBtr0347325'] 2021-10-25 09:33:57.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267761 has a single transcript. 2021-10-25 09:33:57.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039744: ['FBtr0085562'] 2021-10-25 09:33:57.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039744 has a single transcript. 2021-10-25 09:33:57.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267762: ['FBtr0347326'] 2021-10-25 09:33:57.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267762 has a single transcript. 2021-10-25 09:33:57.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039747: ['FBtr0085581', 'FBtr0334658'] 2021-10-25 09:33:57.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261506: ['FBtr0331803', 'FBtr0335392'] 2021-10-25 09:33:57.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8415886, 8426873), (8420064, 8426873), (8427093, 8427157), (8427553, 8427614), (8428067, 8430280), (8428067, 8428319), (8429462, 8430280)] 2021-10-25 09:33:57.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8427614, 8429462, 'FBtr0079667_exon_4') contains intron (8428067, 8428319) 2021-10-25 09:33:57.030 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8427614, 8429462, 'FBtr0340241_exon_4') contains intron (8428067, 8428319) 2021-10-25 09:33:57.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079667_exon_4', 'FBtr0340241_exon_4'] 2021-10-25 09:33:57.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267763: ['FBtr0347327'] 2021-10-25 09:33:57.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267763 has a single transcript. 2021-10-25 09:33:57.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267764: ['FBtr0347328'] 2021-10-25 09:33:57.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267764 has a single transcript. 2021-10-25 09:33:57.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267765: ['FBtr0347329'] 2021-10-25 09:33:57.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267765 has a single transcript. 2021-10-25 09:33:57.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267766: ['FBtr0347330'] 2021-10-25 09:33:57.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267766 has a single transcript. 2021-10-25 09:33:57.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267767: ['FBtr0347331'] 2021-10-25 09:33:57.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267767 has a single transcript. 2021-10-25 09:33:57.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19953874, 19953931), (19954023, 19954145), (19954094, 19954145), (19954231, 19954291), (19954327, 19954389)] 2021-10-25 09:33:57.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.068 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30136419, 30136485), (30136419, 30136491), (30136981, 30137073), (30137285, 30138053), (30138862, 30149160)] 2021-10-25 09:33:57.069 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.069 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267768: ['FBtr0347332'] 2021-10-25 09:33:57.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267768 has a single transcript. 2021-10-25 09:33:57.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267769: ['FBtr0347333'] 2021-10-25 09:33:57.083 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267769 has a single transcript. 2021-10-25 09:33:57.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267770: ['FBtr0347334'] 2021-10-25 09:33:57.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267770 has a single transcript. 2021-10-25 09:33:57.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267771: ['FBtr0347335'] 2021-10-25 09:33:57.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267771 has a single transcript. 2021-10-25 09:33:57.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267772: ['FBtr0347336'] 2021-10-25 09:33:57.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267772 has a single transcript. 2021-10-25 09:33:57.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267773: ['FBtr0347337'] 2021-10-25 09:33:57.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267773 has a single transcript. 2021-10-25 09:33:57.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039748: ['FBtr0085567', 'FBtr0347342'] 2021-10-25 09:33:57.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261507: ['FBtr0307886'] 2021-10-25 09:33:57.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261507 has a single transcript. 2021-10-25 09:33:57.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002629: ['FBtr0084980'] 2021-10-25 09:33:57.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002629 has a single transcript. 2021-10-25 09:33:57.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267774: ['FBtr0347338'] 2021-10-25 09:33:57.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267774 has a single transcript. 2021-10-25 09:33:57.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261508: ['FBtr0302437'] 2021-10-25 09:33:57.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261508 has a single transcript. 2021-10-25 09:33:57.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032785: ['FBtr0081236', 'FBtr0081237', 'FBtr0081238', 'FBtr0332317'] 2021-10-25 09:33:57.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267775: ['FBtr0347339'] 2021-10-25 09:33:57.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002631: ['FBtr0084979'] 2021-10-25 09:33:57.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267775 has a single transcript. 2021-10-25 09:33:57.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002631 has a single transcript. 2021-10-25 09:33:57.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267776: ['FBtr0347340'] 2021-10-25 09:33:57.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267776 has a single transcript. 2021-10-25 09:33:57.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261509: ['FBtr0310017', 'FBtr0310018', 'FBtr0310019', 'FBtr0310020', 'FBtr0344146'] 2021-10-25 09:33:57.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1486591, 1489451), (1486591, 1489448), (1489553, 1489667), (1490175, 1490540), (1490692, 1490753), (1490906, 1490968), (1491258, 1491355), (1491949, 1492159), (1492310, 1492490), (1493262, 1501796), (1493262, 1496347), (1493262, 1496093), (1493262, 1507429), (1493262, 1501193), (1502502, 1507429)] 2021-10-25 09:33:57.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002632: ['FBtr0084959'] 2021-10-25 09:33:57.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002632 has a single transcript. 2021-10-25 09:33:57.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267777: ['FBtr0347341'] 2021-10-25 09:33:57.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267777 has a single transcript. 2021-10-25 09:33:57.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267778: ['FBtr0347343'] 2021-10-25 09:33:57.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267778 has a single transcript. 2021-10-25 09:33:57.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002633: ['FBtr0084960'] 2021-10-25 09:33:57.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002633 has a single transcript. 2021-10-25 09:33:57.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30152394, 30152642)] 2021-10-25 09:33:57.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036319: ['FBtr0075935', 'FBtr0332049', 'FBtr0345343'] 2021-10-25 09:33:57.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267779: ['FBtr0347344'] 2021-10-25 09:33:57.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267779 has a single transcript. 2021-10-25 09:33:57.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002638: ['FBtr0077074', 'FBtr0077075', 'FBtr0077076'] 2021-10-25 09:33:57.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267780: ['FBtr0347345'] 2021-10-25 09:33:57.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267780 has a single transcript. 2021-10-25 09:33:57.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267781: ['FBtr0347346'] 2021-10-25 09:33:57.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267781 has a single transcript. 2021-10-25 09:33:57.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267782: ['FBtr0347348'] 2021-10-25 09:33:57.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267782 has a single transcript. 2021-10-25 09:33:57.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267783: ['FBtr0347347'] 2021-10-25 09:33:57.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267783 has a single transcript. 2021-10-25 09:33:57.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039749: ['FBtr0302562', 'FBtr0452163'] 2021-10-25 09:33:57.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12854263, 12854451), (12855013, 12855190), (12855013, 12855187), (12855433, 12855491)] 2021-10-25 09:33:57.227 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19454563, 19454730), (19454980, 19456408), (19455857, 19456408), (19456183, 19456408), (19456568, 19456629), (19456724, 19456823), (19457168, 19457227), (19457406, 19457475)] 2021-10-25 09:33:57.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267785: ['FBtr0347351'] 2021-10-25 09:33:57.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.229 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267785 has a single transcript. 2021-10-25 09:33:57.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5931558, 5931617), (5932317, 5932405), (5932317, 5932524), (5932464, 5932524)] 2021-10-25 09:33:57.239 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5932405, 5932773, 'FBtr0077074_exon_1') contains intron (5932464, 5932524) 2021-10-25 09:33:57.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077074_exon_1'] 2021-10-25 09:33:57.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267786: ['FBtr0347352'] 2021-10-25 09:33:57.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267786 has a single transcript. 2021-10-25 09:33:57.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1555205, 1556832), (1555205, 1556539), (1555211, 1556832), (1555753, 1556323), (1556915, 1600615), (1600825, 1600961), (1601912, 1602321), (1602657, 1602943), (1603629, 1604197), (1604336, 1604760), (1604885, 1606389), (1604885, 1605095), (1604885, 1605098), (1605485, 1606389)] 2021-10-25 09:33:57.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267787: ['FBtr0347353'] 2021-10-25 09:33:57.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267787 has a single transcript. 2021-10-25 09:33:57.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267788: ['FBtr0347354'] 2021-10-25 09:33:57.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267788 has a single transcript. 2021-10-25 09:33:57.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267789: ['FBtr0347355'] 2021-10-25 09:33:57.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267789 has a single transcript. 2021-10-25 09:33:57.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30153219, 30153280), (30153605, 30154753), (30154883, 30155058), (30155823, 30155914), (30156250, 30156408), (30156482, 30159953)] 2021-10-25 09:33:57.269 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30155914, 30156482, 'FBtr0302562_exon_2') contains intron (30156250, 30156408) 2021-10-25 09:33:57.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302562_exon_2'] 2021-10-25 09:33:57.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267790: ['FBtr0082123', 'FBtr0304684'] 2021-10-25 09:33:57.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027934: ['FBtr0090038'] 2021-10-25 09:33:57.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027934 has a single transcript. 2021-10-25 09:33:57.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027945: ['FBtr0078412'] 2021-10-25 09:33:57.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027945 has a single transcript. 2021-10-25 09:33:57.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9506199, 9506257), (9507386, 9509435), (9507386, 9508290), (9508429, 9509435), (9510016, 9510162)] 2021-10-25 09:33:57.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036320: ['FBtr0075936'] 2021-10-25 09:33:57.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036320 has a single transcript. 2021-10-25 09:33:57.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027948: ['FBtr0304801', 'FBtr0304802', 'FBtr0304803', 'FBtr0301479', 'FBtr0301480'] 2021-10-25 09:33:57.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039751: ['FBtr0085574', 'FBtr0339185'] 2021-10-25 09:33:57.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036321: ['FBtr0075868'] 2021-10-25 09:33:57.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036321 has a single transcript. 2021-10-25 09:33:57.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036323: ['FBtr0075870'] 2021-10-25 09:33:57.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036323 has a single transcript. 2021-10-25 09:33:57.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002641: ['FBtr0077306', 'FBtr0344987'] 2021-10-25 09:33:57.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036324: ['FBtr0343628', 'FBtr0113169'] 2021-10-25 09:33:57.370 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30176585, 30176642), (30176884, 30176943), (30177091, 30177176), (30177389, 30177453), (30177550, 30177618)] 2021-10-25 09:33:57.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032787: ['FBtr0332318', 'FBtr0302930'] 2021-10-25 09:33:57.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.376 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267791: ['FBtr0086219', 'FBtr0086220', 'FBtr0086221', 'FBtr0086222', 'FBtr0301760', 'FBtr0336730'] 2021-10-25 09:33:57.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20430326, 20430397), (20430548, 20430743), (20431526, 20431587)] 2021-10-25 09:33:57.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12902027, 12902111), (12902047, 12902111)] 2021-10-25 09:33:57.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.422 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19483362, 19483426), (19483634, 19483691), (19483773, 19483888), (19484146, 19484213), (19484458, 19484511)] 2021-10-25 09:33:57.423 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053514: ['FBtr0091456'] 2021-10-25 09:33:57.423 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053514 has a single transcript. 2021-10-25 09:33:57.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039752: ['FBtr0085568', 'FBtr0085569', 'FBtr0339182'] 2021-10-25 09:33:57.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053516: ['FBtr0300671', 'FBtr0334782', 'FBtr0334783'] 2021-10-25 09:33:57.440 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16051176, 16052074), (16051916, 16052074), (16052833, 16052888), (16052959, 16053023), (16053343, 16053402), (16055936, 16055995), (16056233, 16056291), (16056791, 16057293), (16056791, 16057551), (16057389, 16057551), (16057965, 16058028), (16058218, 16058290), (16058544, 16058603), (16058934, 16059001), (16059175, 16059242), (16059375, 16059460), (16059375, 16059484), (16059684, 16059738)] 2021-10-25 09:33:57.441 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.441 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261514: ['FBtr0343642', 'FBtr0304719', 'FBtr0304720'] 2021-10-25 09:33:57.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036325: ['FBtr0075903'] 2021-10-25 09:33:57.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036325 has a single transcript. 2021-10-25 09:33:57.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002643: ['FBtr0087596', 'FBtr0087597', 'FBtr0087598', 'FBtr0339956'] 2021-10-25 09:33:57.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036327: ['FBtr0075900'] 2021-10-25 09:33:57.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036327 has a single transcript. 2021-10-25 09:33:57.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036328: ['FBtr0075871'] 2021-10-25 09:33:57.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036328 has a single transcript. 2021-10-25 09:33:57.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036329: ['FBtr0075872'] 2021-10-25 09:33:57.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036329 has a single transcript. 2021-10-25 09:33:57.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036330: ['FBtr0075873', 'FBtr0300699'] 2021-10-25 09:33:57.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30178195, 30178248), (30178366, 30178432), (30179512, 30179577), (30179699, 30179764), (30179699, 30179769), (30179699, 30179749)] 2021-10-25 09:33:57.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032788: ['FBtr0081240'] 2021-10-25 09:33:57.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032788 has a single transcript. 2021-10-25 09:33:57.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20587744, 20589616), (20587744, 20595556), (20589667, 20595556), (20594080, 20595556), (20595663, 20595757), (20595814, 20597547), (20595814, 20598452), (20597591, 20598452), (20598525, 20598598), (20598694, 20604695), (20603148, 20604695), (20605619, 20605681), (20605851, 20606443), (20605876, 20606443)] 2021-10-25 09:33:57.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13958152, 13960830), (13961005, 13961063), (13961181, 13961248), (13961952, 13962119), (13961956, 13962119)] 2021-10-25 09:33:57.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2059983, 2061809), (2061907, 2061974), (2062299, 2065610), (2065743, 2066519), (2066597, 2066741), (2067160, 2094412), (2095172, 2109725), (2095172, 2109818)] 2021-10-25 09:33:57.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032789: ['FBtr0081242'] 2021-10-25 09:33:57.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032789 has a single transcript. 2021-10-25 09:33:57.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13006852, 13006900)] 2021-10-25 09:33:57.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13006816, 13007881, 'FBtr0075873_exon_1') contains intron (13006852, 13006900) 2021-10-25 09:33:57.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075873_exon_1'] 2021-10-25 09:33:57.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032790: ['FBtr0081285'] 2021-10-25 09:33:57.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032790 has a single transcript. 2021-10-25 09:33:57.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13991492, 13991977), (13992104, 14010162), (14009238, 14010162), (14009532, 14010162), (14011181, 14038709), (14031839, 14038032), (14038423, 14038709), (14039968, 14058768), (14040779, 14055762), (14056048, 14056116), (14057196, 14057261)] 2021-10-25 09:33:57.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032791: ['FBtr0081243', 'FBtr0331324'] 2021-10-25 09:33:57.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036331: ['FBtr0306091', 'FBtr0332074'] 2021-10-25 09:33:57.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039754: ['FBtr0085573', 'FBtr0346162'] 2021-10-25 09:33:57.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19490572, 19490633)] 2021-10-25 09:33:57.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261522: ['FBtr0344595'] 2021-10-25 09:33:57.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261522 has a single transcript. 2021-10-25 09:33:57.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053517: ['FBtr0070034', 'FBtr0343167', 'FBtr0343168', 'FBtr0343169', 'FBtr0343170', 'FBtr0343171'] 2021-10-25 09:33:57.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261523: ['FBtr0302458'] 2021-10-25 09:33:57.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261523 has a single transcript. 2021-10-25 09:33:57.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13008567, 13008622), (13008873, 13008935), (13008877, 13008935)] 2021-10-25 09:33:57.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261524: ['FBtr0073720'] 2021-10-25 09:33:57.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261524 has a single transcript. 2021-10-25 09:33:57.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30186282, 30186429), (30186821, 30187388), (30187519, 30190317)] 2021-10-25 09:33:57.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261526: ['FBtr0301518', 'FBtr0301608', 'FBtr0301517', 'FBtr0301519', 'FBtr0301520', 'FBtr0333586', 'FBtr0333587'] 2021-10-25 09:33:57.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032793: ['FBtr0081284', 'FBtr0331327'] 2021-10-25 09:33:57.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027949: ['FBtr0081258'] 2021-10-25 09:33:57.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0027949 has a single transcript. 2021-10-25 09:33:57.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027950: ['FBtr0082068', 'FBtr0082069', 'FBtr0334654'] 2021-10-25 09:33:57.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036332: ['FBtr0075899'] 2021-10-25 09:33:57.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036332 has a single transcript. 2021-10-25 09:33:57.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036333: ['FBtr0075898'] 2021-10-25 09:33:57.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036333 has a single transcript. 2021-10-25 09:33:57.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002645: ['FBtr0085875', 'FBtr0085876', 'FBtr0334299'] 2021-10-25 09:33:57.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19492908, 19493166)] 2021-10-25 09:33:57.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039755: ['FBtr0085572'] 2021-10-25 09:33:57.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039755 has a single transcript. 2021-10-25 09:33:57.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036334: ['FBtr0075875'] 2021-10-25 09:33:57.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036334 has a single transcript. 2021-10-25 09:33:57.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039756: ['FBtr0085571'] 2021-10-25 09:33:57.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039756 has a single transcript. 2021-10-25 09:33:57.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036335: ['FBtr0075897'] 2021-10-25 09:33:57.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036335 has a single transcript. 2021-10-25 09:33:57.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036336: ['FBtr0075876', 'FBtr0332075'] 2021-10-25 09:33:57.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039757: ['FBtr0089425', 'FBtr0089422', 'FBtr0089423', 'FBtr0339183'] 2021-10-25 09:33:57.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9560031, 9560922), (9560031, 9560274), (9560031, 9560271), (9560613, 9560922)] 2021-10-25 09:33:57.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(32058769, 32058931), (32059145, 32061445), (32059145, 32066328), (32061511, 32066328)] 2021-10-25 09:33:57.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (32057015, 32059145, 'FBtr0085875_exon_2') contains intron (32058769, 32058931) 2021-10-25 09:33:57.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (32056591, 32059145, 'FBtr0085876_exon_3') contains intron (32058769, 32058931) 2021-10-25 09:33:57.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085875_exon_2', 'FBtr0085876_exon_3'] 2021-10-25 09:33:57.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20007230, 20007340), (20007441, 20007629), (20007441, 20010324), (20007764, 20008829), (20007764, 20008853), (20007764, 20010324), (20009126, 20010324), (20009129, 20010324), (20010623, 20011129), (20011382, 20011454), (20011564, 20013101), (20011564, 20026704), (20013657, 20013716), (20026895, 20027750), (20028938, 20062054), (20028938, 20044906), (20045022, 20062054)] 2021-10-25 09:33:57.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13018620, 13018687), (13019059, 13019187)] 2021-10-25 09:33:57.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267792: ['FBtr0088692', 'FBtr0339354'] 2021-10-25 09:33:57.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032796: ['FBtr0081282', 'FBtr0081283', 'FBtr0329963'] 2021-10-25 09:33:57.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8601229, 8608311), (8601229, 8608156), (8608255, 8608311), (8608521, 8609049), (8609394, 8609454), (8609847, 8609913)] 2021-10-25 09:33:57.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30206721, 30208092), (30208425, 30208489), (30208657, 30208916)] 2021-10-25 09:33:57.817 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30208489, 30208942, 'FBtr0089423_exon_1') contains intron (30208657, 30208916) 2021-10-25 09:33:57.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089423_exon_1'] 2021-10-25 09:33:57.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036337: ['FBtr0075895', 'FBtr0075896', 'FBtr0346531'] 2021-10-25 09:33:57.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4502799, 4502890), (4503464, 4503531), (4503678, 4504047), (4504179, 4504403), (4505308, 4505399), (4505902, 4508060), (4505902, 4507948), (4505902, 4508352)] 2021-10-25 09:33:57.830 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4501651, 4503464, 'FBtr0301608_exon_6') contains intron (4502799, 4502890) 2021-10-25 09:33:57.831 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4501651, 4503464, 'FBtr0333586_exon_6') contains intron (4502799, 4502890) 2021-10-25 09:33:57.831 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4501651, 4503464, 'FBtr0333587_exon_6') contains intron (4502799, 4502890) 2021-10-25 09:33:57.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301608_exon_6', 'FBtr0333586_exon_6', 'FBtr0333587_exon_6'] 2021-10-25 09:33:57.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19506361, 19507489), (19508265, 19508325), (19508265, 19508351)] 2021-10-25 09:33:57.834 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19507489, 19508764, 'FBtr0081283_exon_1') contains intron (19508265, 19508325) 2021-10-25 09:33:57.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081283_exon_1'] 2021-10-25 09:33:57.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0027951: ['FBtr0078733', 'FBtr0078734', 'FBtr0290206', 'FBtr0330315'] 2021-10-25 09:33:57.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002673: ['FBtr0080855', 'FBtr0331444', 'FBtr0331445', 'FBtr0331446'] 2021-10-25 09:33:57.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267793: ['FBtr0345380', 'FBtr0347228'] 2021-10-25 09:33:57.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13020826, 13021073), (13021557, 13022437), (13021557, 13021627)] 2021-10-25 09:33:57.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:57.911 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5640564, 5640640), (5640756, 5640820), (5640948, 5641061), (5641415, 5641487), (5641738, 5642113), (5642364, 5642428), (5642698, 5642775), (5642964, 5643023), (5643344, 5643448), (5643777, 5647053), (5643777, 5644162), (5644270, 5647053), (5647215, 5648496)] 2021-10-25 09:33:57.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032797: ['FBtr0081280', 'FBtr0081281', 'FBtr0299519', 'FBtr0302107', 'FBtr0302108'] 2021-10-25 09:33:57.950 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16261505, 16261616), (16261505, 16261590)] 2021-10-25 09:33:57.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:57.952 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0078733': ['FBtr0330315']} 2021-10-25 09:33:57.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:57.952 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330315']] 2021-10-25 09:33:57.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039758: ['FBtr0085639'] 2021-10-25 09:33:57.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039758 has a single transcript. 2021-10-25 09:33:57.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039759: ['FBtr0085638', 'FBtr0345122'] 2021-10-25 09:33:57.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267794: ['FBtr0347237', 'FBtr0347291'] 2021-10-25 09:33:57.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036340: ['FBtr0075883'] 2021-10-25 09:33:57.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036340 has a single transcript. 2021-10-25 09:33:58.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036341: ['FBtr0075886', 'FBtr0332076'] 2021-10-25 09:33:58.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30244700, 30245523), (30246121, 30246560), (30246124, 30246560)] 2021-10-25 09:33:58.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053519: ['FBtr0113464', 'FBtr0343283', 'FBtr0343284', 'FBtr0343285', 'FBtr0343286', 'FBtr0343287'] 2021-10-25 09:33:58.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17934345, 17945336), (17934345, 17934743)] 2021-10-25 09:33:58.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19510137, 19510570), (19510730, 19510786), (19510905, 19510967), (19511082, 19511227), (19511373, 19511427), (19511738, 19511796), (19511904, 19511976), (19512980, 19513043), (19512983, 19513043), (19513251, 19513308), (19514105, 19514167), (19514350, 19514930), (19514859, 19514930), (19515107, 19515167), (19515359, 19515418), (19515598, 19515733), (19516033, 19516440), (19516858, 19517127)] 2021-10-25 09:33:58.052 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19510116, 19510730, 'FBtr0081281_exon_16') contains intron (19510137, 19510570) 2021-10-25 09:33:58.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081281_exon_16'] 2021-10-25 09:33:58.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028292: ['FBtr0071317', 'FBtr0346166'] 2021-10-25 09:33:58.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13044565, 13044917), (13044849, 13044917), (13045595, 13046216)] 2021-10-25 09:33:58.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039760: ['FBtr0345230', 'FBtr0345231'] 2021-10-25 09:33:58.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267795: ['FBtr0075775', 'FBtr0075776', 'FBtr0114573', 'FBtr0334053'] 2021-10-25 09:33:58.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002707: ['FBtr0070656', 'FBtr0343574'] 2021-10-25 09:33:58.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9256377, 9256442)] 2021-10-25 09:33:58.098 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.098 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261529: ['FBtr0080623'] 2021-10-25 09:33:58.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261529 has a single transcript. 2021-10-25 09:33:58.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30251190, 30251246), (30251357, 30251416), (30251554, 30251615), (30251678, 30251756)] 2021-10-25 09:33:58.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261530: ['FBtr0306039', 'FBtr0306040'] 2021-10-25 09:33:58.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036342: ['FBtr0075887', 'FBtr0332077', 'FBtr0345366'] 2021-10-25 09:33:58.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4314727, 4314816), (4315793, 4315859), (4316686, 4316748), (4316903, 4316963), (4317560, 4317632), (4317794, 4317852), (4318150, 4318709)] 2021-10-25 09:33:58.139 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.157 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9720565, 9720625), (9722160, 9722223), (9722160, 9722217), (9723039, 9723104)] 2021-10-25 09:33:58.158 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23995822, 23995880), (23995986, 23996057), (23997709, 23997771), (23997904, 23997966), (23998667, 23998743), (23999325, 23999398), (23999636, 23999694), (23999880, 23999935), (24000076, 24000130), (24000300, 24000361), (24000543, 24000596), (24000898, 24000957), (24001950, 24002008), (24002201, 24002260), (24002400, 24002450), (24002662, 24002727), (24002984, 24003047), (24003416, 24003471), (24003711, 24003775), (24003890, 24003956), (24004123, 24004788), (24004123, 24005022), (24004863, 24005022), (24005204, 24005260), (24005366, 24005421), (24006282, 24006393), (24006954, 24007015), (24007200, 24007264), (24007400, 24007460), (24007546, 24007609), (24007766, 24007833), (24008145, 24009570), (24008145, 24008700), (24008798, 24010922), (24010783, 24010922), (24011015, 24011953), (24011015, 24012267), (24012433, 24012488), (24012659, 24012723), (24012855, 24012913), (24013035, 24013852), (24013038, 24013852)] 2021-10-25 09:33:58.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028325: ['FBtr0070711', 'FBtr0070708', 'FBtr0070709', 'FBtr0070710'] 2021-10-25 09:33:58.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.167 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14054343, 14061427), (14061511, 14065071), (14065158, 14065615), (14065158, 14065588), (14067268, 14067329), (14067543, 14067611), (14067904, 14068191), (14068746, 14068807), (14068927, 14069921), (14068927, 14069085), (14068927, 14069891), (14069396, 14069891)] 2021-10-25 09:33:58.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039761: ['FBtr0085618'] 2021-10-25 09:33:58.169 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039761 has a single transcript. 2021-10-25 09:33:58.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039764: ['FBtr0085629', 'FBtr0346511'] 2021-10-25 09:33:58.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13047171, 13047234)] 2021-10-25 09:33:58.189 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.189 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002709: ['FBtr0100639', 'FBtr0100640', 'FBtr0299823', 'FBtr0303847'] 2021-10-25 09:33:58.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261531: ['FBtr0303712'] 2021-10-25 09:33:58.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261531 has a single transcript. 2021-10-25 09:33:58.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30423639, 30423709)] 2021-10-25 09:33:58.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261532: ['FBtr0083619', 'FBtr0336472'] 2021-10-25 09:33:58.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032798: ['FBtr0081247', 'FBtr0343771'] 2021-10-25 09:33:58.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4702300, 4702434), (4702591, 4702823), (4702591, 4702691), (4702892, 4703554), (4704119, 4704194), (4704517, 4704587)] 2021-10-25 09:33:58.241 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4702324, 4702892, 'FBtr0070710_exon_1') contains intron (4702591, 4702823) 2021-10-25 09:33:58.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070710_exon_1'] 2021-10-25 09:33:58.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18180001, 18180065), (18180625, 18180684), (18180822, 18180882), (18181080, 18181146), (18181746, 18181851), (18182533, 18182595), (18183092, 18183190)] 2021-10-25 09:33:58.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039765: ['FBtr0085625'] 2021-10-25 09:33:58.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039765 has a single transcript. 2021-10-25 09:33:58.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19519159, 19520533), (19520655, 19520712), (19520915, 19521066), (19522333, 19522398), (19522504, 19522561), (19523376, 19523436), (19524175, 19524239), (19524430, 19524490), (19524966, 19525023)] 2021-10-25 09:33:58.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039766: ['FBtr0085628'] 2021-10-25 09:33:58.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039766 has a single transcript. 2021-10-25 09:33:58.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17137396, 17137688), (17137921, 17137977), (17139311, 17139375), (17140915, 17140978), (17141203, 17141325), (17141481, 17141693), (17141481, 17142801), (17141761, 17142266), (17142707, 17142801)] 2021-10-25 09:33:58.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17141693, 17142990, 'FBtr0299823_exon_1') contains intron (17141761, 17142266) 2021-10-25 09:33:58.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299823_exon_1'] 2021-10-25 09:33:58.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036343: ['FBtr0075893'] 2021-10-25 09:33:58.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036343 has a single transcript. 2021-10-25 09:33:58.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039767: ['FBtr0085627', 'FBtr0339142'] 2021-10-25 09:33:58.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036345: ['FBtr0075892'] 2021-10-25 09:33:58.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036345 has a single transcript. 2021-10-25 09:33:58.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036346: ['FBtr0075891'] 2021-10-25 09:33:58.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036346 has a single transcript. 2021-10-25 09:33:58.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036348: ['FBtr0075838'] 2021-10-25 09:33:58.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036348 has a single transcript. 2021-10-25 09:33:58.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036349: ['FBtr0075840'] 2021-10-25 09:33:58.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036349 has a single transcript. 2021-10-25 09:33:58.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261534: ['FBtr0080640', 'FBtr0343680'] 2021-10-25 09:33:58.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036350: ['FBtr0331787'] 2021-10-25 09:33:58.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036350 has a single transcript. 2021-10-25 09:33:58.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30426814, 30427135)] 2021-10-25 09:33:58.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267796: ['FBtr0347573', 'FBtr0347574'] 2021-10-25 09:33:58.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032799: ['FBtr0081279'] 2021-10-25 09:33:58.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032799 has a single transcript. 2021-10-25 09:33:58.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036351: ['FBtr0075866'] 2021-10-25 09:33:58.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036351 has a single transcript. 2021-10-25 09:33:58.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036352: ['FBtr0075844'] 2021-10-25 09:33:58.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036352 has a single transcript. 2021-10-25 09:33:58.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032800: ['FBtr0081248'] 2021-10-25 09:33:58.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032800 has a single transcript. 2021-10-25 09:33:58.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036353: ['FBtr0075864', 'FBtr0075865'] 2021-10-25 09:33:58.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032801: ['FBtr0081277', 'FBtr0081278', 'FBtr0344843', 'FBtr0303779', 'FBtr0303780'] 2021-10-25 09:33:58.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028327: ['FBtr0071372', 'FBtr0343412'] 2021-10-25 09:33:58.374 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9598084, 9603841), (9603978, 9604050), (9604091, 9604411), (9604702, 9604930), (9605058, 9605326), (9605431, 9605748), (9605937, 9606015), (9606146, 9606392), (9606503, 9607104), (9607199, 9607262), (9607359, 9607420), (9607513, 9607659), (9607815, 9607879), (9609836, 9611203), (9611308, 9611380), (9611562, 9611617), (9611794, 9611849), (9612172, 9612242)] 2021-10-25 09:33:58.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14349639, 14349708), (14349782, 14351457), (14349782, 14351474)] 2021-10-25 09:33:58.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039768: ['FBtr0085626'] 2021-10-25 09:33:58.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039768 has a single transcript. 2021-10-25 09:33:58.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13386538, 13386600), (13387598, 13387665), (13387610, 13387665)] 2021-10-25 09:33:58.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039769: ['FBtr0085644'] 2021-10-25 09:33:58.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039769 has a single transcript. 2021-10-25 09:33:58.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039770: ['FBtr0113310', 'FBtr0339141'] 2021-10-25 09:33:58.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9552783, 9553451)] 2021-10-25 09:33:58.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002715: ['FBtr0071761', 'FBtr0342979'] 2021-10-25 09:33:58.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267797: ['FBtr0347366'] 2021-10-25 09:33:58.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267797 has a single transcript. 2021-10-25 09:33:58.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261535: ['FBtr0080639'] 2021-10-25 09:33:58.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261535 has a single transcript. 2021-10-25 09:33:58.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053523: ['FBtr0091475', 'FBtr0091476', 'FBtr0091477', 'FBtr0091478', 'FBtr0330119', 'FBtr0306383'] 2021-10-25 09:33:58.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267798: ['FBtr0347367'] 2021-10-25 09:33:58.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267798 has a single transcript. 2021-10-25 09:33:58.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267799: ['FBtr0347368'] 2021-10-25 09:33:58.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267799 has a single transcript. 2021-10-25 09:33:58.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261536: ['FBtr0302558', 'FBtr0346505'] 2021-10-25 09:33:58.458 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30435599, 30435656), (30435820, 30435881), (30436000, 30436052), (30436159, 30436217), (30436519, 30438300), (30438376, 30443190)] 2021-10-25 09:33:58.459 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.459 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036354: ['FBtr0075863', 'FBtr0321318'] 2021-10-25 09:33:58.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267800: ['FBtr0347369'] 2021-10-25 09:33:58.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267800 has a single transcript. 2021-10-25 09:33:58.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19527705, 19527760), (19527953, 19528087), (19528369, 19530089), (19528369, 19528770), (19528369, 19530268), (19528996, 19530089), (19528996, 19529991)] 2021-10-25 09:33:58.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267801: ['FBtr0347370'] 2021-10-25 09:33:58.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267801 has a single transcript. 2021-10-25 09:33:58.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028331: ['FBtr0071470', 'FBtr0347008', 'FBtr0347009'] 2021-10-25 09:33:58.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22122200, 22122902), (22123474, 22123535)] 2021-10-25 09:33:58.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267802: ['FBtr0347371'] 2021-10-25 09:33:58.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267802 has a single transcript. 2021-10-25 09:33:58.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267803: ['FBtr0347372', 'FBtr0347373'] 2021-10-25 09:33:58.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7465614, 7465669), (7465837, 7465900), (7466029, 7466086), (7466179, 7466246), (7466348, 7466400), (7466568, 7466625), (7466751, 7466818), (7467075, 7467128), (7467187, 7467252), (7467420, 7467477), (7467657, 7467723), (7467858, 7467919), (7468096, 7468145)] 2021-10-25 09:33:58.499 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7467477, 7467858, 'FBtr0346505_exon_11') contains intron (7467657, 7467723) 2021-10-25 09:33:58.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346505_exon_11'] 2021-10-25 09:33:58.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13388578, 13388722), (13388926, 13388993)] 2021-10-25 09:33:58.515 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13388298, 13388926, 'FBtr0075863_exon_2') contains intron (13388578, 13388722) 2021-10-25 09:33:58.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075863_exon_2'] 2021-10-25 09:33:58.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039771: ['FBtr0330291'] 2021-10-25 09:33:58.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039771 has a single transcript. 2021-10-25 09:33:58.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:58.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039773: ['FBtr0085691', 'FBtr0331358'] 2021-10-25 09:33:58.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002716: ['FBtr0086461'] 2021-10-25 09:33:58.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002716 has a single transcript. 2021-10-25 09:33:58.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10348854, 10356366), (10357813, 10358085), (10358504, 10358562), (10358635, 10358699), (10358851, 10358917), (10359127, 10359296), (10360163, 10366123)] 2021-10-25 09:33:58.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002719: ['FBtr0082660', 'FBtr0082661', 'FBtr0330025'] 2021-10-25 09:33:58.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261537: ['FBtr0302559', 'FBtr0346506'] 2021-10-25 09:33:58.577 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5924195, 5924836), (5925322, 5925400), (5925624, 5926736), (5925624, 5928223), (5926834, 5928223), (5927066, 5928223), (5927907, 5928223), (5928296, 5928536), (5928640, 5928703), (5929039, 5929103)] 2021-10-25 09:33:58.578 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036356: ['FBtr0075861', 'FBtr0345341'] 2021-10-25 09:33:58.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30457224, 30457291), (30457404, 30457462), (30457778, 30458270), (30458822, 30458925)] 2021-10-25 09:33:58.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.589 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267804: ['FBtr0347374'] 2021-10-25 09:33:58.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267804 has a single transcript. 2021-10-25 09:33:58.595 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0091475': ['FBtr0330119']} 2021-10-25 09:33:58.595 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330119']] 2021-10-25 09:33:58.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267805: ['FBtr0347375'] 2021-10-25 09:33:58.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267805 has a single transcript. 2021-10-25 09:33:58.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267806: ['FBtr0347377'] 2021-10-25 09:33:58.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267806 has a single transcript. 2021-10-25 09:33:58.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267807: ['FBtr0347376'] 2021-10-25 09:33:58.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267807 has a single transcript. 2021-10-25 09:33:58.616 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7465614, 7465669), (7465837, 7465900), (7466029, 7466086), (7466179, 7466246), (7466348, 7466400), (7466568, 7466625), (7466751, 7466818), (7467075, 7467128), (7467187, 7467252), (7467420, 7467477), (7467657, 7467723), (7467858, 7467919), (7468096, 7468145)] 2021-10-25 09:33:58.617 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7467477, 7467858, 'FBtr0346506_exon_11') contains intron (7467657, 7467723) 2021-10-25 09:33:58.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346506_exon_11'] 2021-10-25 09:33:58.617 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12714147, 12714203), (12715132, 12719402), (12720027, 12720616), (12720027, 12722135)] 2021-10-25 09:33:58.621 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.621 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267808: ['FBtr0347378'] 2021-10-25 09:33:58.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267808 has a single transcript. 2021-10-25 09:33:58.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:58.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267809: ['FBtr0347379'] 2021-10-25 09:33:58.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267809 has a single transcript. 2021-10-25 09:33:58.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267810: ['FBtr0347380'] 2021-10-25 09:33:58.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267810 has a single transcript. 2021-10-25 09:33:58.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028336: ['FBtr0070953', 'FBtr0070954'] 2021-10-25 09:33:58.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267811: ['FBtr0347381'] 2021-10-25 09:33:58.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267811 has a single transcript. 2021-10-25 09:33:58.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039774: ['FBtr0085645', 'FBtr0085646', 'FBtr0085647', 'FBtr0085648', 'FBtr0085649', 'FBtr0331357'] 2021-10-25 09:33:58.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267812: ['FBtr0347382'] 2021-10-25 09:33:58.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267812 has a single transcript. 2021-10-25 09:33:58.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267813: ['FBtr0347383'] 2021-10-25 09:33:58.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267813 has a single transcript. 2021-10-25 09:33:58.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032803: ['FBtr0081251'] 2021-10-25 09:33:58.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032803 has a single transcript. 2021-10-25 09:33:58.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267814: ['FBtr0347384'] 2021-10-25 09:33:58.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267814 has a single transcript. 2021-10-25 09:33:58.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032804: ['FBtr0081252', 'FBtr0343772'] 2021-10-25 09:33:58.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267815: ['FBtr0347385'] 2021-10-25 09:33:58.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267815 has a single transcript. 2021-10-25 09:33:58.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261538: ['FBtr0302554', 'FBtr0302555', 'FBtr0309868', 'FBtr0302556'] 2021-10-25 09:33:58.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6678616, 6679825), (6679760, 6679825), (6679957, 6680297), (6680498, 6680567), (6681372, 6681436)] 2021-10-25 09:33:58.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036359: ['FBtr0075857'] 2021-10-25 09:33:58.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036359 has a single transcript. 2021-10-25 09:33:58.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267816: ['FBtr0347386'] 2021-10-25 09:33:58.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267816 has a single transcript. 2021-10-25 09:33:58.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267817: ['FBtr0347387'] 2021-10-25 09:33:58.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267817 has a single transcript. 2021-10-25 09:33:58.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036360: ['FBtr0075855'] 2021-10-25 09:33:58.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036360 has a single transcript. 2021-10-25 09:33:58.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267818: ['FBtr0347388', 'FBtr0347389'] 2021-10-25 09:33:58.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036361: ['FBtr0075854', 'FBtr0303093'] 2021-10-25 09:33:58.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19540993, 19541048), (19541226, 19541288)] 2021-10-25 09:33:58.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002723: ['FBtr0073521', 'FBtr0343585'] 2021-10-25 09:33:58.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7997254, 7997303)] 2021-10-25 09:33:58.749 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7995984, 7997406, 'FBtr0347388_exon_1') contains intron (7997254, 7997303) 2021-10-25 09:33:58.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347388_exon_1'] 2021-10-25 09:33:58.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028341: ['FBtr0071407', 'FBtr0071406', 'FBtr0071404', 'FBtr0071405', 'FBtr0100192', 'FBtr0100193', 'FBtr0333427', 'FBtr0303558', 'FBtr0303559'] 2021-10-25 09:33:58.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13436078, 13436220), (13436705, 13436791), (13437031, 13437095)] 2021-10-25 09:33:58.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15699618, 15699687), (15700015, 15701111), (15701323, 15701378), (15701572, 15701628)] 2021-10-25 09:33:58.772 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15699687, 15701323, 'FBtr0302555_exon_3') contains intron (15700015, 15701111) 2021-10-25 09:33:58.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032805: ['FBtr0081276'] 2021-10-25 09:33:58.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032805 has a single transcript. 2021-10-25 09:33:58.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302555_exon_3'] 2021-10-25 09:33:58.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032809: ['FBtr0081256'] 2021-10-25 09:33:58.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032809 has a single transcript. 2021-10-25 09:33:58.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053526: ['FBtr0091487', 'FBtr0091486', 'FBtr0091489', 'FBtr0332000'] 2021-10-25 09:33:58.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11618160, 11618229)] 2021-10-25 09:33:58.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.788 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30459540, 30462814), (30459842, 30462814), (30460789, 30462814), (30460890, 30462814), (30460894, 30462814), (30460908, 30462550), (30462667, 30462814), (30462969, 30463031), (30463355, 30463414), (30464281, 30464706), (30465317, 30465377)] 2021-10-25 09:33:58.789 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032810: ['FBtr0081257', 'FBtr0336619'] 2021-10-25 09:33:58.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267819: ['FBtr0347390', 'FBtr0347391'] 2021-10-25 09:33:58.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036362: ['FBtr0089323'] 2021-10-25 09:33:58.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036362 has a single transcript. 2021-10-25 09:33:58.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036363: ['FBtr0075853'] 2021-10-25 09:33:58.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036363 has a single transcript. 2021-10-25 09:33:58.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036364: ['FBtr0075850', 'FBtr0331532'] 2021-10-25 09:33:58.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19566441, 19566507), (19566700, 19566985)] 2021-10-25 09:33:58.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002732: ['FBtr0084956'] 2021-10-25 09:33:58.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002732 has a single transcript. 2021-10-25 09:33:58.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002733: ['FBtr0084982'] 2021-10-25 09:33:58.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002733 has a single transcript. 2021-10-25 09:33:58.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:33:58.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.852 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002734: ['FBtr0084954'] 2021-10-25 09:33:58.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002734 has a single transcript. 2021-10-25 09:33:58.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13440980, 13441214), (13441279, 13441626)] 2021-10-25 09:33:58.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002735: ['FBtr0084955'] 2021-10-25 09:33:58.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002735 has a single transcript. 2021-10-25 09:33:58.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002736: ['FBtr0071569'] 2021-10-25 09:33:58.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002736 has a single transcript. 2021-10-25 09:33:58.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(870552, 871340), (871274, 871340), (871576, 871640), (871738, 871805), (872080, 872207), (873539, 875037)] 2021-10-25 09:33:58.890 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (870464, 871576, 'FBtr0091489_exon_1') contains intron (870552, 871340) 2021-10-25 09:33:58.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0091489_exon_1'] 2021-10-25 09:33:58.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032811: ['FBtr0081266'] 2021-10-25 09:33:58.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032811 has a single transcript. 2021-10-25 09:33:58.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002772: ['FBtr0085196', 'FBtr0085195', 'FBtr0344131'] 2021-10-25 09:33:58.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032812: ['FBtr0081263', 'FBtr0081264', 'FBtr0331245', 'FBtr0331246'] 2021-10-25 09:33:58.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267820: ['FBtr0347392'] 2021-10-25 09:33:58.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267820 has a single transcript. 2021-10-25 09:33:58.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261545: ['FBtr0302644', 'FBtr0302645', 'FBtr0310576'] 2021-10-25 09:33:58.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267821: ['FBtr0080008', 'FBtr0332195', 'FBtr0332196'] 2021-10-25 09:33:58.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036365: ['FBtr0075851', 'FBtr0075852', 'FBtr0331533', 'FBtr0331534'] 2021-10-25 09:33:58.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9629332, 9629395), (9629603, 9629667), (9629897, 9629962), (9630123, 9630193), (9631095, 9638192), (9631095, 9643656), (9631095, 9640533), (9638462, 9638915), (9638465, 9638915), (9638465, 9640533), (9643887, 9643956), (9644367, 9658000), (9644367, 9650484), (9644367, 9645710), (9644367, 9649738), (9644367, 9658846), (9658166, 9658846)] 2021-10-25 09:33:58.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27657955, 27658468), (27657955, 27658066), (27658113, 27658468), (27658555, 27658615), (27658921, 27659928), (27659956, 27660109)] 2021-10-25 09:33:58.973 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:58.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12705636, 12722304), (12723006, 12734920), (12735119, 12738435), (12735119, 12746608), (12738504, 12746608), (12746661, 12747677), (12747747, 12748912), (12749461, 12749522), (12750275, 12750337), (12750275, 12750340)] 2021-10-25 09:33:58.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:58.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10388527, 10390048)] 2021-10-25 09:33:59.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19581285, 19581355), (19581876, 19582006), (19581903, 19582006)] 2021-10-25 09:33:59.020 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19580611, 19581876, 'FBtr0081263_exon_2') contains intron (19581285, 19581355) 2021-10-25 09:33:59.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.020 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19580611, 19581903, 'FBtr0081264_exon_2') contains intron (19581285, 19581355) 2021-10-25 09:33:59.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081263_exon_2', 'FBtr0081264_exon_2'] 2021-10-25 09:33:59.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13442988, 13443299), (13443456, 13443688), (13444086, 13444212), (13444305, 13444367), (13445639, 13445735), (13445639, 13445738), (13445898, 13446008), (13445898, 13446011), (13446280, 13446341), (13446883, 13447273), (13448384, 13448442)] 2021-10-25 09:33:59.032 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13444367, 13445898, 'FBtr0075851_exon_5') contains intron (13445639, 13445735) 2021-10-25 09:33:59.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13444367, 13445898, 'FBtr0075852_exon_4') contains intron (13445639, 13445735) 2021-10-25 09:33:59.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075851_exon_5', 'FBtr0075852_exon_4'] 2021-10-25 09:33:59.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039776: ['FBtr0085650'] 2021-10-25 09:33:59.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039776 has a single transcript. 2021-10-25 09:33:59.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039777: ['FBtr0085690'] 2021-10-25 09:33:59.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039777 has a single transcript. 2021-10-25 09:33:59.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053527: ['FBtr0305055'] 2021-10-25 09:33:59.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053527 has a single transcript. 2021-10-25 09:33:59.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039778: ['FBtr0085652'] 2021-10-25 09:33:59.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039778 has a single transcript. 2021-10-25 09:33:59.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053530: ['FBtr0091496', 'FBtr0303024'] 2021-10-25 09:33:59.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039779: ['FBtr0085653'] 2021-10-25 09:33:59.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039779 has a single transcript. 2021-10-25 09:33:59.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039780: ['FBtr0085688'] 2021-10-25 09:33:59.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039780 has a single transcript. 2021-10-25 09:33:59.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002773: ['FBtr0089747'] 2021-10-25 09:33:59.083 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002773 has a single transcript. 2021-10-25 09:33:59.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039782: ['FBtr0085655', 'FBtr0110859', 'FBtr0345121'] 2021-10-25 09:33:59.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002774: ['FBtr0086031', 'FBtr0100576'] 2021-10-25 09:33:59.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261547: ['FBtr0302647', 'FBtr0302648', 'FBtr0302649', 'FBtr0302650', 'FBtr0302651'] 2021-10-25 09:33:59.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16751135, 16751192), (16751297, 16751449), (16751350, 16751449)] 2021-10-25 09:33:59.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267823: ['FBtr0071905'] 2021-10-25 09:33:59.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267823 has a single transcript. 2021-10-25 09:33:59.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267824: ['FBtr0347396'] 2021-10-25 09:33:59.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267824 has a single transcript. 2021-10-25 09:33:59.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5977468, 5977986), (5978677, 5979318), (5979637, 5979700), (5979637, 5980042), (5980559, 5980618)] 2021-10-25 09:33:59.135 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267826: ['FBtr0347399'] 2021-10-25 09:33:59.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267826 has a single transcript. 2021-10-25 09:33:59.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30506188, 30506240), (30506374, 30506424), (30506575, 30506628), (30506828, 30506887), (30507015, 30507065), (30507015, 30507068), (30507509, 30507561), (30507603, 30507658), (30507824, 30507879)] 2021-10-25 09:33:59.150 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30506240, 30506575, 'FBtr0085655_exon_2') contains intron (30506374, 30506424) 2021-10-25 09:33:59.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085655_exon_2'] 2021-10-25 09:33:59.151 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267827: ['FBtr0347397', 'FBtr0445834'] 2021-10-25 09:33:59.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032813: ['FBtr0081262'] 2021-10-25 09:33:59.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032813 has a single transcript. 2021-10-25 09:33:59.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032814: ['FBtr0081259'] 2021-10-25 09:33:59.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032814 has a single transcript. 2021-10-25 09:33:59.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053531: ['FBtr0340169', 'FBtr0344770', 'FBtr0344771'] 2021-10-25 09:33:59.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036366: ['FBtr0075825'] 2021-10-25 09:33:59.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036366 has a single transcript. 2021-10-25 09:33:59.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032815: ['FBtr0081325', 'FBtr0100351', 'FBtr0100352', 'FBtr0331243', 'FBtr0331244', 'FBtr0305952'] 2021-10-25 09:33:59.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002775: ['FBtr0076926'] 2021-10-25 09:33:59.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002775 has a single transcript. 2021-10-25 09:33:59.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036367: ['FBtr0075824'] 2021-10-25 09:33:59.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036367 has a single transcript. 2021-10-25 09:33:59.201 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(588579, 588646)] 2021-10-25 09:33:59.202 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002778: ['FBtr0075626', 'FBtr0075627', 'FBtr0114529'] 2021-10-25 09:33:59.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036368: ['FBtr0302487', 'FBtr0302488', 'FBtr0304791', 'FBtr0304792'] 2021-10-25 09:33:59.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16970540, 16980558), (16976771, 16980558), (16983862, 16985235), (16985339, 16991013), (16986680, 16990501), (16986711, 16990501), (16986720, 16990501), (16990879, 16991013), (16991261, 16991323), (16992298, 16992359), (16992549, 16992616), (16993638, 16993708), (16993913, 16993977)] 2021-10-25 09:33:59.219 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.219 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039783: ['FBtr0085685'] 2021-10-25 09:33:59.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039783 has a single transcript. 2021-10-25 09:33:59.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039784: ['FBtr0085657'] 2021-10-25 09:33:59.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039784 has a single transcript. 2021-10-25 09:33:59.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6253329, 6272749), (6273126, 6278678), (6278784, 6289764), (6289996, 6290543), (6290691, 6291005), (6291185, 6291244), (6291378, 6293484), (6293692, 6296603), (6296741, 6297023), (6297235, 6297588), (6297736, 6301153), (6301682, 6303094), (6303343, 6303757), (6303850, 6320227), (6320390, 6321758), (6321908, 6321970)] 2021-10-25 09:33:59.255 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267828: ['FBtr0347403', 'FBtr0347404', 'FBtr0347405', 'FBtr0347406'] 2021-10-25 09:33:59.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039787: ['FBtr0085664', 'FBtr0336448', 'FBtr0336449'] 2021-10-25 09:33:59.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14985154, 14987581), (14985154, 14987911), (14988249, 14989848), (14990067, 14990145), (14990741, 14990829)] 2021-10-25 09:33:59.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13451574, 13459972), (13460685, 13460741), (13461051, 13461110), (13461361, 13461492), (13461564, 13461638), (13461784, 13461852), (13462018, 13462202), (13462018, 13462101), (13462107, 13462202), (13462293, 13462357), (13462545, 13462864), (13462545, 13462903), (13463083, 13463141), (13463246, 13463308), (13463380, 13463444), (13463619, 13463678), (13464999, 13465058)] 2021-10-25 09:33:59.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.328 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19732670, 19732744), (19732676, 19732744), (19733069, 19733162), (19733590, 19733638), (19734409, 19734469), (19734412, 19734469), (19734941, 19734999), (19735221, 19735511), (19735633, 19735766)] 2021-10-25 09:33:59.329 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19735511, 19735980, 'FBtr0100351_exon_1') contains intron (19735633, 19735766) 2021-10-25 09:33:59.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100351_exon_1'] 2021-10-25 09:33:59.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028342: ['FBtr0071438', 'FBtr0332896', 'FBtr0343981'] 2021-10-25 09:33:59.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30580026, 30580339), (30581429, 30581499), (30581429, 30581487)] 2021-10-25 09:33:59.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10512608, 10512667), (10512869, 10512934), (10513564, 10516485), (10516739, 10516815), (10516893, 10516994)] 2021-10-25 09:33:59.362 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10516485, 10516893, 'FBtr0347405_exon_2') contains intron (10516739, 10516815) 2021-10-25 09:33:59.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347405_exon_2'] 2021-10-25 09:33:59.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053532: ['FBtr0091498', 'FBtr0302361'] 2021-10-25 09:33:59.375 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0347404': ['FBtr0347406']} 2021-10-25 09:33:59.375 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0347406']] 2021-10-25 09:33:59.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002780: ['FBtr0085874', 'FBtr0310268'] 2021-10-25 09:33:59.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10213074, 10213280), (10213485, 10213559), (10213771, 10214098)] 2021-10-25 09:33:59.404 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.404 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.404 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19418408, 19418470)] 2021-10-25 09:33:59.405 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(32052176, 32052319), (32052396, 32052480), (32052977, 32053245), (32053555, 32053622), (32054357, 32054423)] 2021-10-25 09:33:59.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261549: ['FBtr0302660', 'FBtr0302661', 'FBtr0302662', 'FBtr0302663', 'FBtr0302664', 'FBtr0302665', 'FBtr0344165', 'FBtr0344166', 'FBtr0333601', 'FBtr0333602'] 2021-10-25 09:33:59.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039788: ['FBtr0085680'] 2021-10-25 09:33:59.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039788 has a single transcript. 2021-10-25 09:33:59.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036369: ['FBtr0075820', 'FBtr0075821', 'FBtr0075822', 'FBtr0075823', 'FBtr0331535', 'FBtr0345364'] 2021-10-25 09:33:59.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039789: ['FBtr0085679'] 2021-10-25 09:33:59.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039789 has a single transcript. 2021-10-25 09:33:59.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053533: ['FBtr0091499', 'FBtr0302362'] 2021-10-25 09:33:59.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267849: ['FBtr0078351', 'FBtr0078352'] 2021-10-25 09:33:59.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039790: ['FBtr0085676', 'FBtr0085677', 'FBtr0085678', 'FBtr0085673', 'FBtr0085674', 'FBtr0085675', 'FBtr0302605', 'FBtr0302606', 'FBtr0302607', 'FBtr0302608', 'FBtr0302609', 'FBtr0302610', 'FBtr0302313', 'FBtr0335443', 'FBtr0335444', 'FBtr0335445'] 2021-10-25 09:33:59.488 | ERROR | trand.event_analysis:loop_over_genes:1411 - Multiple strands found in ['FBtr0084066', 'FBtr0084067', 'FBtr0084068', 'FBtr0084069', 'FBtr0084070', 'FBtr0084071', 'FBtr0084072', 'FBtr0084073', 'FBtr0084074', 'FBtr0084075', 'FBtr0084077', 'FBtr0084078', 'FBtr0084079', 'FBtr0084080', 'FBtr0084081', 'FBtr0084082', 'FBtr0084083', 'FBtr0084084', 'FBtr0084085', 'FBtr0084060', 'FBtr0084061', 'FBtr0084062', 'FBtr0084063', 'FBtr0084064', 'FBtr0084065', 'FBtr0114359', 'FBtr0114360', 'FBtr0114361', 'FBtr0307759', 'FBtr0307760', 'FBtr0343765'], skipping. 2021-10-25 09:33:59.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002783: ['FBtr0083238', 'FBtr0302550'] 2021-10-25 09:33:59.500 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19419175, 19419306)] 2021-10-25 09:33:59.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21446023, 21446160), (21446023, 21446197), (21446375, 21446442), (21446512, 21446862), (21447007, 21447080), (21447497, 21447555)] 2021-10-25 09:33:59.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028343: ['FBtr0301413', 'FBtr0301414', 'FBtr0301415', 'FBtr0340625'] 2021-10-25 09:33:59.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15968510, 15968574), (15969402, 15969881), (15969594, 15969881), (15970092, 15970154), (15970929, 15970992), (15971323, 15971373), (15972298, 15972478), (15972604, 15972695)] 2021-10-25 09:33:59.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053534: ['FBtr0100842'] 2021-10-25 09:33:59.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053534 has a single transcript. 2021-10-25 09:33:59.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053535: ['FBtr0100843'] 2021-10-25 09:33:59.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053535 has a single transcript. 2021-10-25 09:33:59.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032816: ['FBtr0081289', 'FBtr0343854'] 2021-10-25 09:33:59.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267861: ['FBtr0113829', 'FBtr0113830', 'FBtr0113831', 'FBtr0301121', 'FBtr0344972'] 2021-10-25 09:33:59.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053536: ['FBtr0100845'] 2021-10-25 09:33:59.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053536 has a single transcript. 2021-10-25 09:33:59.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053537: ['FBtr0100849'] 2021-10-25 09:33:59.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053537 has a single transcript. 2021-10-25 09:33:59.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053538: ['FBtr0100846'] 2021-10-25 09:33:59.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053538 has a single transcript. 2021-10-25 09:33:59.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053539: ['FBtr0100847'] 2021-10-25 09:33:59.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053539 has a single transcript. 2021-10-25 09:33:59.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053542: ['FBtr0113465'] 2021-10-25 09:33:59.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053542 has a single transcript. 2021-10-25 09:33:59.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002787: ['FBtr0072290', 'FBtr0330237', 'FBtr0332921'] 2021-10-25 09:33:59.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13466888, 13466943), (13467139, 13467343), (13467871, 13468443), (13468894, 13468952), (13469069, 13469135), (13469069, 13469776), (13469212, 13469776), (13469862, 13474296), (13469862, 13474347)] 2021-10-25 09:33:59.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17572444, 17572519), (17572459, 17572519), (17572651, 17572709), (17572843, 17572908), (17573475, 17573540), (17574539, 17574819), (17574972, 17575049), (17575768, 17575842), (17576022, 17578512), (17578767, 17579104)] 2021-10-25 09:33:59.621 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.621 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19736208, 19736272), (19736580, 19736633)] 2021-10-25 09:33:59.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053543: ['FBtr0309285'] 2021-10-25 09:33:59.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053543 has a single transcript. 2021-10-25 09:33:59.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053544: ['FBtr0091510'] 2021-10-25 09:33:59.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053544 has a single transcript. 2021-10-25 09:33:59.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8907744, 8908064), (8908321, 8916696), (8912944, 8916696), (8916702, 9014828), (8916702, 9013310), (8925696, 8999379), (9000240, 9000681), (9000249, 9000681), (9002117, 9014825), (9002117, 9014828), (9014556, 9014828), (9014967, 9016124), (9016328, 9017843), (9016328, 9017861), (9017988, 9019404), (9019783, 9019850), (9020031, 9020866), (9020031, 9020881), (9021291, 9021358), (9021652, 9021725), (9021952, 9022017), (9022239, 9024260), (9022239, 9023274), (9022239, 9024073), (9023326, 9023741), (9023326, 9024073), (9023795, 9024073), (9024137, 9024260), (9024418, 9024623), (9024787, 9025165)] 2021-10-25 09:33:59.677 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9024623, 9027615, 'FBtr0333601_exon_16') contains intron (9024787, 9025165) 2021-10-25 09:33:59.678 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9024623, 9029476, 'FBtr0333602_exon_16') contains intron (9024787, 9025165) 2021-10-25 09:33:59.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333601_exon_16', 'FBtr0333602_exon_16'] 2021-10-25 09:33:59.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053547: ['FBtr0336713', 'FBtr0336714', 'FBtr0336715', 'FBtr0336716', 'FBtr0336717', 'FBtr0336718', 'FBtr0336719', 'FBtr0336720', 'FBtr0336721', 'FBtr0336722', 'FBtr0336723', 'FBtr0308498', 'FBtr0305016', 'FBtr0305021'] 2021-10-25 09:33:59.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032817: ['FBtr0081324'] 2021-10-25 09:33:59.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032817 has a single transcript. 2021-10-25 09:33:59.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032818: ['FBtr0081323'] 2021-10-25 09:33:59.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032818 has a single transcript. 2021-10-25 09:33:59.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24400103, 24403063), (24403364, 24403431)] 2021-10-25 09:33:59.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032819: ['FBtr0081290'] 2021-10-25 09:33:59.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032819 has a single transcript. 2021-10-25 09:33:59.709 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072290': ['FBtr0330237']} 2021-10-25 09:33:59.709 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330237']] 2021-10-25 09:33:59.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1515836, 1515889), (1516167, 1516221), (1516468, 1516519), (1516661, 1521331), (1521506, 1527004), (1521559, 1527004), (1521559, 1526740)] 2021-10-25 09:33:59.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032820: ['FBtr0081321', 'FBtr0343856', 'FBtr0343857', 'FBtr0347410'] 2021-10-25 09:33:59.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002789: ['FBtr0087745', 'FBtr0345532'] 2021-10-25 09:33:59.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028360: ['FBtr0070950', 'FBtr0343377'] 2021-10-25 09:33:59.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19762305, 19762487), (19762814, 19763425), (19762814, 19764069), (19762831, 19763425), (19762831, 19764069), (19763497, 19764069)] 2021-10-25 09:33:59.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6654896, 6655059), (6655480, 6655549), (6655480, 6655552), (6655772, 6657606)] 2021-10-25 09:33:59.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13246772, 13246916), (13247249, 13247316), (13247504, 13248811)] 2021-10-25 09:33:59.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.857 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30593420, 30593488), (30593635, 30593704), (30593816, 30594817), (30593819, 30594817), (30593849, 30594817), (30593849, 30594112), (30594169, 30594817), (30594984, 30595039), (30595328, 30595389), (30595621, 30600123), (30595626, 30601416), (30595626, 30595720), (30595626, 30599918), (30595626, 30601200), (30595626, 30600123), (30595626, 30600263), (30601308, 30601416)] 2021-10-25 09:33:59.858 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30601200, 30601489, 'FBtr0085673_exon_1') contains intron (30601308, 30601416) 2021-10-25 09:33:59.859 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30601200, 30601489, 'FBtr0302313_exon_1') contains intron (30601308, 30601416) 2021-10-25 09:33:59.860 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30601200, 30601489, 'FBtr0335443_exon_1') contains intron (30601308, 30601416) 2021-10-25 09:33:59.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036372: ['FBtr0075819'] 2021-10-25 09:33:59.860 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036372 has a single transcript. 2021-10-25 09:33:59.860 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30601200, 30601489, 'FBtr0335444_exon_1') contains intron (30601308, 30601416) 2021-10-25 09:33:59.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085673_exon_1', 'FBtr0302313_exon_1', 'FBtr0335443_exon_1', 'FBtr0335444_exon_1'] 2021-10-25 09:33:59.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036373: ['FBtr0075810', 'FBtr0075811'] 2021-10-25 09:33:59.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028369: ['FBtr0070559', 'FBtr0070560', 'FBtr0309498', 'FBtr0309499', 'FBtr0309500', 'FBtr0309501', 'FBtr0332492'] 2021-10-25 09:33:59.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002791: ['FBtr0072156'] 2021-10-25 09:33:59.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002791 has a single transcript. 2021-10-25 09:33:59.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002838: ['FBtr0085063'] 2021-10-25 09:33:59.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002838 has a single transcript. 2021-10-25 09:33:59.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002842: ['FBtr0078401'] 2021-10-25 09:33:59.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002842 has a single transcript. 2021-10-25 09:33:59.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13487007, 13487562), (13487730, 13500899), (13496146, 13500899), (13501214, 13501282)] 2021-10-25 09:33:59.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:33:59.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:33:59.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002855: ['FBtr0079155'] 2021-10-25 09:33:59.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002855 has a single transcript. 2021-10-25 09:33:59.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267862: ['FBtr0347419'] 2021-10-25 09:33:59.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267862 has a single transcript. 2021-10-25 09:33:59.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002856: ['FBtr0079156', 'FBtr0079157', 'FBtr0342618'] 2021-10-25 09:33:59.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267863: ['FBtr0347420'] 2021-10-25 09:33:59.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267863 has a single transcript. 2021-10-25 09:33:59.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267864: ['FBtr0347422'] 2021-10-25 09:33:59.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267864 has a single transcript. 2021-10-25 09:33:59.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267865: ['FBtr0347423'] 2021-10-25 09:33:59.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267865 has a single transcript. 2021-10-25 09:33:59.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032821: ['FBtr0081318', 'FBtr0300966', 'FBtr0300967', 'FBtr0332179'] 2021-10-25 09:33:59.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267866: ['FBtr0347424'] 2021-10-25 09:33:59.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267866 has a single transcript. 2021-10-25 09:33:59.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267867: ['FBtr0347425'] 2021-10-25 09:33:59.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267867 has a single transcript. 2021-10-25 09:33:59.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036374: ['FBtr0075812', 'FBtr0340705', 'FBtr0304904'] 2021-10-25 09:33:59.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267868: ['FBtr0347426'] 2021-10-25 09:33:59.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267868 has a single transcript. 2021-10-25 09:33:59.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267869: ['FBtr0347464'] 2021-10-25 09:33:59.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267869 has a single transcript. 2021-10-25 09:33:59.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267870: ['FBtr0347463'] 2021-10-25 09:33:59.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267870 has a single transcript. 2021-10-25 09:34:00.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5892745, 5892806)] 2021-10-25 09:34:00.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.001 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267871: ['FBtr0347431'] 2021-10-25 09:34:00.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267871 has a single transcript. 2021-10-25 09:34:00.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17875545, 17875783), (17875545, 17876331), (17875545, 17877066), (17875947, 17877066), (17877198, 17877258), (17877426, 17877488), (17877666, 17878777), (17877666, 17881177), (17878997, 17881775), (17881427, 17881775), (17881901, 17882100), (17882183, 17885603), (17884103, 17885603), (17884682, 17885603), (17885947, 17886148), (17886541, 17893904), (17886541, 17887420), (17887543, 17889594), (17887543, 17893904), (17889780, 17890460), (17890595, 17890660), (17890798, 17890893), (17891507, 17892100), (17892406, 17892539), (17892786, 17893904), (17892786, 17896460), (17894902, 17904946), (17896528, 17904946), (17905550, 17905645), (17906002, 17906063), (17906189, 17907986), (17908191, 17908630), (17909655, 17914953), (17915164, 17916138)] 2021-10-25 09:34:00.015 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17875783, 17877198, 'FBtr0305021_exon_23') contains intron (17875947, 17877066) 2021-10-25 09:34:00.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267872: ['FBtr0347433'] 2021-10-25 09:34:00.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267872 has a single transcript. 2021-10-25 09:34:00.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305021_exon_23'] 2021-10-25 09:34:00.016 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267873: ['FBtr0347432'] 2021-10-25 09:34:00.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267873 has a single transcript. 2021-10-25 09:34:00.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267874: ['FBtr0347462'] 2021-10-25 09:34:00.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267874 has a single transcript. 2021-10-25 09:34:00.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13503384, 13503455), (13504397, 13504455), (13506570, 13506639), (13506871, 13506934), (13508545, 13509049), (13508545, 13508875), (13509334, 13509397)] 2021-10-25 09:34:00.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267875: ['FBtr0347461'] 2021-10-25 09:34:00.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267875 has a single transcript. 2021-10-25 09:34:00.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19777014, 19777081), (19777020, 19777081), (19778946, 19779017), (19779330, 19779399), (19779333, 19779399), (19781025, 19781091), (19782365, 19782420), (19782825, 19791269), (19782825, 19791763), (19791341, 19791763)] 2021-10-25 09:34:00.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267876: ['FBtr0347434'] 2021-10-25 09:34:00.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267876 has a single transcript. 2021-10-25 09:34:00.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2740471, 2741156), (2741004, 2741156), (2741244, 2862763), (2862816, 2968280), (2862816, 2994860), (2968578, 2994860), (2989113, 2989185), (2989281, 2994860), (2995159, 2995210), (2995488, 3129252), (2995488, 3113167), (2995488, 3066110), (3066508, 3099761), (3100318, 3129252), (3100318, 3113167), (3113223, 3129252), (3128802, 3129252), (3130312, 3130381), (3130484, 3130558), (3130686, 3130742), (3131847, 3131925)] 2021-10-25 09:34:00.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267877: ['FBtr0347460'] 2021-10-25 09:34:00.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267877 has a single transcript. 2021-10-25 09:34:00.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267878: ['FBtr0347435'] 2021-10-25 09:34:00.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267878 has a single transcript. 2021-10-25 09:34:00.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267879: ['FBtr0347436'] 2021-10-25 09:34:00.076 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267879 has a single transcript. 2021-10-25 09:34:00.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267880: ['FBtr0347459'] 2021-10-25 09:34:00.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267880 has a single transcript. 2021-10-25 09:34:00.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267881: ['FBtr0347437'] 2021-10-25 09:34:00.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267881 has a single transcript. 2021-10-25 09:34:00.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002862: ['FBtr0082884', 'FBtr0346062'] 2021-10-25 09:34:00.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267882: ['FBtr0347438'] 2021-10-25 09:34:00.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267882 has a single transcript. 2021-10-25 09:34:00.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267883: ['FBtr0347458'] 2021-10-25 09:34:00.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267883 has a single transcript. 2021-10-25 09:34:00.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267884: ['FBtr0347439'] 2021-10-25 09:34:00.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267884 has a single transcript. 2021-10-25 09:34:00.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261550: ['FBtr0302673', 'FBtr0302666', 'FBtr0302667', 'FBtr0302668', 'FBtr0302669', 'FBtr0302670', 'FBtr0303586', 'FBtr0306633', 'FBtr0306634'] 2021-10-25 09:34:00.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267885: ['FBtr0347457'] 2021-10-25 09:34:00.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267885 has a single transcript. 2021-10-25 09:34:00.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13827488, 13827831), (13827488, 13827578)] 2021-10-25 09:34:00.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267886: ['FBtr0347456'] 2021-10-25 09:34:00.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267886 has a single transcript. 2021-10-25 09:34:00.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036376: ['FBtr0075813', 'FBtr0075814', 'FBtr0330342'] 2021-10-25 09:34:00.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267887: ['FBtr0347440'] 2021-10-25 09:34:00.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267887 has a single transcript. 2021-10-25 09:34:00.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267888: ['FBtr0347455'] 2021-10-25 09:34:00.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267888 has a single transcript. 2021-10-25 09:34:00.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267889: ['FBtr0347454'] 2021-10-25 09:34:00.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267889 has a single transcript. 2021-10-25 09:34:00.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267890: ['FBtr0347453'] 2021-10-25 09:34:00.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267890 has a single transcript. 2021-10-25 09:34:00.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267891: ['FBtr0347441'] 2021-10-25 09:34:00.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267891 has a single transcript. 2021-10-25 09:34:00.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032822: ['FBtr0081291', 'FBtr0332178'] 2021-10-25 09:34:00.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267892: ['FBtr0347452'] 2021-10-25 09:34:00.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267892 has a single transcript. 2021-10-25 09:34:00.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002863: ['FBtr0084561'] 2021-10-25 09:34:00.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002863 has a single transcript. 2021-10-25 09:34:00.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267893: ['FBtr0347442'] 2021-10-25 09:34:00.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267893 has a single transcript. 2021-10-25 09:34:00.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267894: ['FBtr0347451'] 2021-10-25 09:34:00.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267894 has a single transcript. 2021-10-25 09:34:00.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002865: ['FBtr0085277'] 2021-10-25 09:34:00.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002865 has a single transcript. 2021-10-25 09:34:00.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267895: ['FBtr0347449'] 2021-10-25 09:34:00.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267895 has a single transcript. 2021-10-25 09:34:00.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13513397, 13513481), (13513417, 13513481), (13513792, 13513857), (13514801, 13514862)] 2021-10-25 09:34:00.226 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13513363, 13513792, 'FBtr0075814_exon_1') contains intron (13513397, 13513481) 2021-10-25 09:34:00.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075814_exon_1'] 2021-10-25 09:34:00.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002868: ['FBtr0082158', 'FBtr0334686'] 2021-10-25 09:34:00.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267896: ['FBtr0347443'] 2021-10-25 09:34:00.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267896 has a single transcript. 2021-10-25 09:34:00.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267897: ['FBtr0347448'] 2021-10-25 09:34:00.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267897 has a single transcript. 2021-10-25 09:34:00.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19792451, 19792509)] 2021-10-25 09:34:00.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267898: ['FBtr0347444'] 2021-10-25 09:34:00.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267898 has a single transcript. 2021-10-25 09:34:00.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267899: ['FBtr0347430'] 2021-10-25 09:34:00.257 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267899 has a single transcript. 2021-10-25 09:34:00.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267900: ['FBtr0347447'] 2021-10-25 09:34:00.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267900 has a single transcript. 2021-10-25 09:34:00.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9783959, 9784223)] 2021-10-25 09:34:00.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267901: ['FBtr0347445'] 2021-10-25 09:34:00.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267901 has a single transcript. 2021-10-25 09:34:00.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267902: ['FBtr0347446'] 2021-10-25 09:34:00.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267902 has a single transcript. 2021-10-25 09:34:00.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267903: ['FBtr0347450'] 2021-10-25 09:34:00.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267903 has a single transcript. 2021-10-25 09:34:00.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267904: ['FBtr0347429'] 2021-10-25 09:34:00.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267904 has a single transcript. 2021-10-25 09:34:00.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267905: ['FBtr0347428'] 2021-10-25 09:34:00.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267905 has a single transcript. 2021-10-25 09:34:00.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032824: ['FBtr0081314', 'FBtr0332245'] 2021-10-25 09:34:00.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267910: ['FBtr0307365', 'FBtr0307366'] 2021-10-25 09:34:00.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002869: ['FBtr0083890', 'FBtr0346152', 'FBtr0346153'] 2021-10-25 09:34:00.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036377: ['FBtr0075817'] 2021-10-25 09:34:00.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036377 has a single transcript. 2021-10-25 09:34:00.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036380: ['FBtr0306683'] 2021-10-25 09:34:00.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20309630, 20309903), (20309666, 20309903), (20310638, 20318976), (20310638, 20315838), (20315940, 20318976), (20318285, 20318976), (20319026, 20319563), (20319710, 20319768), (20320000, 20320214), (20320451, 20321475), (20320874, 20321475), (20321413, 20321475), (20321636, 20321701), (20321713, 20321767), (20321880, 20321948), (20323142, 20323214)] 2021-10-25 09:34:00.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036380 has a single transcript. 2021-10-25 09:34:00.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20309343, 20310638, 'FBtr0302673_exon_1') contains intron (20309630, 20309903) 2021-10-25 09:34:00.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028370: ['FBtr0080752', 'FBtr0300848'] 2021-10-25 09:34:00.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0302673_exon_7') contains intron (20321713, 20321767) 2021-10-25 09:34:00.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0302666_exon_3') contains intron (20321713, 20321767) 2021-10-25 09:34:00.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0302667_exon_7') contains intron (20321713, 20321767) 2021-10-25 09:34:00.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0302668_exon_7') contains intron (20321713, 20321767) 2021-10-25 09:34:00.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0302670_exon_6') contains intron (20321713, 20321767) 2021-10-25 09:34:00.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0303586_exon_8') contains intron (20321713, 20321767) 2021-10-25 09:34:00.344 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0306633_exon_9') contains intron (20321713, 20321767) 2021-10-25 09:34:00.344 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20321701, 20321880, 'FBtr0306634_exon_6') contains intron (20321713, 20321767) 2021-10-25 09:34:00.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302673_exon_1', 'FBtr0302673_exon_7', 'FBtr0302666_exon_3', 'FBtr0302667_exon_7', 'FBtr0302668_exon_7', 'FBtr0302670_exon_6', 'FBtr0303586_exon_8', 'FBtr0306633_exon_9', 'FBtr0306634_exon_6'] 2021-10-25 09:34:00.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036381: ['FBtr0075801'] 2021-10-25 09:34:00.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036381 has a single transcript. 2021-10-25 09:34:00.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036382: ['FBtr0075754', 'FBtr0075755'] 2021-10-25 09:34:00.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19814413, 19814473)] 2021-10-25 09:34:00.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:00.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15552809, 15554509), (15552873, 15554509), (15555030, 15578882), (15580850, 15581858)] 2021-10-25 09:34:00.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20503444, 20503505)] 2021-10-25 09:34:00.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13879095, 13882638), (13882188, 13882638)] 2021-10-25 09:34:00.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032827: ['FBtr0081312'] 2021-10-25 09:34:00.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032827 has a single transcript. 2021-10-25 09:34:00.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267912: ['FBtr0074292', 'FBtr0074293', 'FBtr0305198', 'FBtr0332870'] 2021-10-25 09:34:00.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032833: ['FBtr0081300', 'FBtr0081301', 'FBtr0332242', 'FBtr0332243'] 2021-10-25 09:34:00.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028371: ['FBtr0071919', 'FBtr0302374', 'FBtr0301374', 'FBtr0301375', 'FBtr0301376', 'FBtr0301377', 'FBtr0330233', 'FBtr0330234', 'FBtr0302116', 'FBtr0302117'] 2021-10-25 09:34:00.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036386: ['FBtr0075792'] 2021-10-25 09:34:00.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036386 has a single transcript. 2021-10-25 09:34:00.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036389: ['FBtr0075759', 'FBtr0346645'] 2021-10-25 09:34:00.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002872: ['FBtr0072856', 'FBtr0072857', 'FBtr0301465'] 2021-10-25 09:34:00.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13965392, 13965523), (13965630, 13968646), (13968702, 13968760), (13971100, 13971161), (13971317, 13971420)] 2021-10-25 09:34:00.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19958764, 19959266), (19958768, 19959266), (19958909, 19959266), (19959691, 19959750)] 2021-10-25 09:34:00.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.512 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19958831, 19959691, 'FBtr0332243_exon_1') contains intron (19958909, 19959266) 2021-10-25 09:34:00.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332243_exon_1'] 2021-10-25 09:34:00.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16568276, 16569395), (16568276, 16586428), (16568276, 16586924), (16568276, 16586293)] 2021-10-25 09:34:00.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1943196, 1943252), (1943555, 1943614), (1943722, 1943779), (1943821, 1943876), (1945052, 1945109), (1945205, 1945263), (1945381, 1945436), (1945528, 1945647), (1945573, 1945647), (1945591, 1945647), (1946484, 1946538), (1947019, 1947079), (1947280, 1947338)] 2021-10-25 09:34:00.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036390: ['FBtr0075790'] 2021-10-25 09:34:00.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036390 has a single transcript. 2021-10-25 09:34:00.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036391: ['FBtr0333026', 'FBtr0333027', 'FBtr0333028', 'FBtr0333029'] 2021-10-25 09:34:00.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039792: ['FBtr0085672', 'FBtr0335441'] 2021-10-25 09:34:00.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30628666, 30628723), (30628666, 30628720)] 2021-10-25 09:34:00.635 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032834: ['FBtr0081308'] 2021-10-25 09:34:00.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032834 has a single transcript. 2021-10-25 09:34:00.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032835: ['FBtr0081302', 'FBtr0346480'] 2021-10-25 09:34:00.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053548: ['FBtr0070421', 'FBtr0070422', 'FBtr0342772', 'FBtr0345599'] 2021-10-25 09:34:00.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22717810, 22717872), (22718052, 22718123), (22719616, 22719680), (22721775, 22721878), (22722027, 22723936), (22722904, 22723936), (22724157, 22724530), (22725542, 22727563), (22725542, 22729814), (22727781, 22729141), (22727781, 22729131), (22727781, 22729100), (22727781, 22729194), (22727988, 22729100), (22730233, 22730309), (22730743, 22730814), (22731012, 22731665), (22731012, 22731143), (22731491, 22731665), (22731921, 22731981), (22732718, 22732999), (22733305, 22733545), (22734196, 22736604), (22736915, 22740368)] 2021-10-25 09:34:00.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13979207, 13979347), (13979640, 13981986), (13979640, 13982645), (13982852, 13983103), (13983280, 13983439), (13983601, 13983676), (13983823, 13985120), (13986168, 13992828), (13986168, 13992975)] 2021-10-25 09:34:00.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002873: ['FBtr0332621', 'FBtr0332622', 'FBtr0308325', 'FBtr0308326', 'FBtr0308327', 'FBtr0308328', 'FBtr0308329'] 2021-10-25 09:34:00.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267913: ['FBtr0347470', 'FBtr0347471'] 2021-10-25 09:34:00.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19962754, 19962825)] 2021-10-25 09:34:00.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039795: ['FBtr0085698'] 2021-10-25 09:34:00.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039795 has a single transcript. 2021-10-25 09:34:00.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039796: ['FBtr0085728', 'FBtr0335455'] 2021-10-25 09:34:00.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261552: ['FBtr0111027', 'FBtr0111028', 'FBtr0111029', 'FBtr0111030', 'FBtr0111031', 'FBtr0111032', 'FBtr0082037', 'FBtr0082038', 'FBtr0082039', 'FBtr0302692', 'FBtr0302691', 'FBtr0302695', 'FBtr0302694', 'FBtr0302693', 'FBtr0344283', 'FBtr0344284', 'FBtr0334303', 'FBtr0334304'] 2021-10-25 09:34:00.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:00.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2206463, 2212866), (2206463, 2212389), (2206463, 2207533)] 2021-10-25 09:34:00.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032836: ['FBtr0081303', 'FBtr0332182'] 2021-10-25 09:34:00.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30694347, 30694400), (30694678, 30694746), (30694912, 30694968)] 2021-10-25 09:34:00.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267914: ['FBtr0347472'] 2021-10-25 09:34:00.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267914 has a single transcript. 2021-10-25 09:34:00.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19964281, 19964338), (19964365, 19964425), (19964581, 19964643), (19964775, 19964839), (19965010, 19965062)] 2021-10-25 09:34:00.793 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.793 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267915: ['FBtr0347474'] 2021-10-25 09:34:00.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267915 has a single transcript. 2021-10-25 09:34:00.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267916: ['FBtr0347475'] 2021-10-25 09:34:00.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267916 has a single transcript. 2021-10-25 09:34:00.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039797: ['FBtr0085699', 'FBtr0339513'] 2021-10-25 09:34:00.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267917: ['FBtr0347476'] 2021-10-25 09:34:00.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267917 has a single transcript. 2021-10-25 09:34:00.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036393: ['FBtr0333024'] 2021-10-25 09:34:00.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036393 has a single transcript. 2021-10-25 09:34:00.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267918: ['FBtr0347477'] 2021-10-25 09:34:00.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267918 has a single transcript. 2021-10-25 09:34:00.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036394: ['FBtr0075765'] 2021-10-25 09:34:00.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036394 has a single transcript. 2021-10-25 09:34:00.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267919: ['FBtr0347478'] 2021-10-25 09:34:00.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267919 has a single transcript. 2021-10-25 09:34:00.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036395: ['FBtr0075767'] 2021-10-25 09:34:00.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036395 has a single transcript. 2021-10-25 09:34:00.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267921: ['FBtr0347481'] 2021-10-25 09:34:00.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267921 has a single transcript. 2021-10-25 09:34:00.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14248158, 14248224), (14248399, 14248535), (14249120, 14249190), (14249297, 14249374), (14249482, 14249644), (14252875, 14253061), (14252875, 14252935), (14254288, 14255458), (14254288, 14256484), (14254288, 14255012), (14254288, 14255015), (14255554, 14255611), (14255934, 14256000), (14256100, 14256484), (14256298, 14256484), (14256757, 14256976), (14256757, 14258336), (14256757, 14256988)] 2021-10-25 09:34:00.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14249644, 14254288, 'FBtr0308325_exon_6') contains intron (14252875, 14253061) 2021-10-25 09:34:00.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14249644, 14254288, 'FBtr0308326_exon_6') contains intron (14252875, 14253061) 2021-10-25 09:34:00.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14249644, 14254288, 'FBtr0308327_exon_6') contains intron (14252875, 14253061) 2021-10-25 09:34:00.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14249644, 14254288, 'FBtr0308328_exon_6') contains intron (14252875, 14253061) 2021-10-25 09:34:00.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14249644, 14254288, 'FBtr0308329_exon_6') contains intron (14252875, 14253061) 2021-10-25 09:34:00.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308325_exon_6', 'FBtr0308326_exon_6', 'FBtr0308327_exon_6', 'FBtr0308328_exon_6', 'FBtr0308329_exon_6'] 2021-10-25 09:34:00.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036396: ['FBtr0075787'] 2021-10-25 09:34:00.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036396 has a single transcript. 2021-10-25 09:34:00.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032839: ['FBtr0081350'] 2021-10-25 09:34:00.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032839 has a single transcript. 2021-10-25 09:34:00.856 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30727154, 30727214), (30727784, 30727847)] 2021-10-25 09:34:00.856 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30727214, 30727997, 'FBtr0085699_exon_2') contains intron (30727784, 30727847) 2021-10-25 09:34:00.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085699_exon_2'] 2021-10-25 09:34:00.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267922: ['FBtr0347482'] 2021-10-25 09:34:00.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267922 has a single transcript. 2021-10-25 09:34:00.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032840: ['FBtr0081327'] 2021-10-25 09:34:00.860 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032840 has a single transcript. 2021-10-25 09:34:00.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036397: ['FBtr0075785', 'FBtr0075786', 'FBtr0333025'] 2021-10-25 09:34:00.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267923: ['FBtr0347483'] 2021-10-25 09:34:00.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032843: ['FBtr0343848'] 2021-10-25 09:34:00.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267923 has a single transcript. 2021-10-25 09:34:00.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032843 has a single transcript. 2021-10-25 09:34:00.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032845: ['FBtr0081341', 'FBtr0331618'] 2021-10-25 09:34:00.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267924: ['FBtr0347484'] 2021-10-25 09:34:00.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267924 has a single transcript. 2021-10-25 09:34:00.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267925: ['FBtr0347486'] 2021-10-25 09:34:00.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267925 has a single transcript. 2021-10-25 09:34:00.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267926: ['FBtr0347487'] 2021-10-25 09:34:00.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267926 has a single transcript. 2021-10-25 09:34:00.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267927: ['FBtr0347488'] 2021-10-25 09:34:00.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267927 has a single transcript. 2021-10-25 09:34:00.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053551: ['FBtr0091521'] 2021-10-25 09:34:00.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053551 has a single transcript. 2021-10-25 09:34:00.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267928: ['FBtr0347489'] 2021-10-25 09:34:00.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267928 has a single transcript. 2021-10-25 09:34:00.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053552: ['FBtr0091522'] 2021-10-25 09:34:00.916 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053552 has a single transcript. 2021-10-25 09:34:00.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039798: ['FBtr0335451', 'FBtr0335452'] 2021-10-25 09:34:00.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267929: ['FBtr0347490'] 2021-10-25 09:34:00.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267929 has a single transcript. 2021-10-25 09:34:00.925 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20090939, 20090997), (20091188, 20091243)] 2021-10-25 09:34:00.926 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053554: ['FBtr0347556', 'FBtr0303293'] 2021-10-25 09:34:00.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267930: ['FBtr0347491', 'FBtr0347492'] 2021-10-25 09:34:00.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14001433, 14001492), (14001644, 14001789)] 2021-10-25 09:34:00.937 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14001492, 14001818, 'FBtr0075786_exon_1') contains intron (14001644, 14001789) 2021-10-25 09:34:00.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075786_exon_1'] 2021-10-25 09:34:00.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30730506, 30730568), (30730515, 30730568), (30731031, 30731085)] 2021-10-25 09:34:00.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16191448, 16191501)] 2021-10-25 09:34:00.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.978 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5178622, 5180549), (5181767, 5183506), (5183626, 5184123), (5184660, 5185574), (5188356, 5194907), (5188356, 5193556), (5193707, 5194911), (5195194, 5195250), (5196837, 5197810), (5198106, 5198467), (5199860, 5201445), (5202063, 5203751), (5203955, 5204004), (5204139, 5204193), (5204278, 5210501), (5210874, 5212328), (5212467, 5217344), (5217435, 5241895), (5242062, 5242384), (5242582, 5245951), (5246137, 5250728)] 2021-10-25 09:34:00.979 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:00.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:00.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032846: ['FBtr0081333', 'FBtr0331615'] 2021-10-25 09:34:01.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039799: ['FBtr0085700', 'FBtr0346147'] 2021-10-25 09:34:01.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20091505, 20091651)] 2021-10-25 09:34:01.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036398: ['FBtr0075768', 'FBtr0333050'] 2021-10-25 09:34:01.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267932: ['FBtr0347507'] 2021-10-25 09:34:01.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267932 has a single transcript. 2021-10-25 09:34:01.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267933: ['FBtr0347508'] 2021-10-25 09:34:01.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267933 has a single transcript. 2021-10-25 09:34:01.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267934: ['FBtr0347509'] 2021-10-25 09:34:01.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267934 has a single transcript. 2021-10-25 09:34:01.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053556: ['FBtr0091533', 'FBtr0113469'] 2021-10-25 09:34:01.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267935: ['FBtr0347510'] 2021-10-25 09:34:01.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267935 has a single transcript. 2021-10-25 09:34:01.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:01.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267936: ['FBtr0347511'] 2021-10-25 09:34:01.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267936 has a single transcript. 2021-10-25 09:34:01.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267937: ['FBtr0347512'] 2021-10-25 09:34:01.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267937 has a single transcript. 2021-10-25 09:34:01.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028372: ['FBtr0086473', 'FBtr0086474', 'FBtr0330247'] 2021-10-25 09:34:01.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267938: ['FBtr0347513'] 2021-10-25 09:34:01.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267938 has a single transcript. 2021-10-25 09:34:01.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14002301, 14003192), (14002379, 14003192), (14003415, 14007236), (14009717, 14010030), (14010587, 14010696), (14010895, 14010995), (14017627, 14017692), (14017881, 14017945)] 2021-10-25 09:34:01.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267939: ['FBtr0347514'] 2021-10-25 09:34:01.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267939 has a single transcript. 2021-10-25 09:34:01.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032847: ['FBtr0081340'] 2021-10-25 09:34:01.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032847 has a single transcript. 2021-10-25 09:34:01.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267940: ['FBtr0347515'] 2021-10-25 09:34:01.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267940 has a single transcript. 2021-10-25 09:34:01.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267941: ['FBtr0347516'] 2021-10-25 09:34:01.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267941 has a single transcript. 2021-10-25 09:34:01.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032848: ['FBtr0081334', 'FBtr0081335'] 2021-10-25 09:34:01.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7095400, 7111063), (7111467, 7111626), (7111801, 7115216), (7115250, 7117932), (7115250, 7117317), (7117536, 7117932), (7118080, 7118255), (7119274, 7119335), (7119686, 7119747), (7120127, 7120182), (7120750, 7120818), (7120952, 7121014)] 2021-10-25 09:34:01.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.106 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267944: ['FBtr0347519'] 2021-10-25 09:34:01.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267944 has a single transcript. 2021-10-25 09:34:01.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267945: ['FBtr0347520'] 2021-10-25 09:34:01.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267945 has a single transcript. 2021-10-25 09:34:01.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039800: ['FBtr0085723', 'FBtr0306293'] 2021-10-25 09:34:01.123 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9418000, 9419782), (9418000, 9432028), (9418000, 9419806), (9420047, 9432028), (9420047, 9432031), (9428652, 9432028), (9428652, 9432031), (9432839, 9445043), (9432839, 9440680), (9432839, 9441415), (9432839, 9444010), (9434422, 9445043), (9434422, 9444010), (9437118, 9445043), (9437118, 9444010), (9437118, 9439345), (9439705, 9440680), (9439705, 9441415), (9441665, 9444010), (9441665, 9445043), (9444076, 9445043), (9445187, 9445254), (9445895, 9445968), (9446497, 9447628)] 2021-10-25 09:34:01.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9445968, 9449468, 'FBtr0111030_exon_5') contains intron (9446497, 9447628) 2021-10-25 09:34:01.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9445968, 9449468, 'FBtr0082037_exon_5') contains intron (9446497, 9447628) 2021-10-25 09:34:01.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111030_exon_5', 'FBtr0082037_exon_5'] 2021-10-25 09:34:01.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267946: ['FBtr0347521'] 2021-10-25 09:34:01.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267946 has a single transcript. 2021-10-25 09:34:01.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267947: ['FBtr0347522'] 2021-10-25 09:34:01.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267947 has a single transcript. 2021-10-25 09:34:01.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002878: ['FBtr0073817'] 2021-10-25 09:34:01.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002878 has a single transcript. 2021-10-25 09:34:01.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20094353, 20094438), (20095939, 20096002)] 2021-10-25 09:34:01.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267948: ['FBtr0347523'] 2021-10-25 09:34:01.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267948 has a single transcript. 2021-10-25 09:34:01.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036402: ['FBtr0075769', 'FBtr0343100', 'FBtr0304672'] 2021-10-25 09:34:01.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19671149, 19671360), (19671149, 19671283), (19671295, 19671360), (19671850, 19671905), (19672241, 19672293), (19672597, 19672660)] 2021-10-25 09:34:01.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267949: ['FBtr0347524'] 2021-10-25 09:34:01.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002887: ['FBtr0100473', 'FBtr0346117'] 2021-10-25 09:34:01.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267949 has a single transcript. 2021-10-25 09:34:01.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267950: ['FBtr0347525'] 2021-10-25 09:34:01.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267950 has a single transcript. 2021-10-25 09:34:01.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267951: ['FBtr0347526'] 2021-10-25 09:34:01.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267951 has a single transcript. 2021-10-25 09:34:01.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:01.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267952: ['FBtr0347527'] 2021-10-25 09:34:01.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267952 has a single transcript. 2021-10-25 09:34:01.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053557: ['FBtr0091534'] 2021-10-25 09:34:01.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053557 has a single transcript. 2021-10-25 09:34:01.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267953: ['FBtr0347528'] 2021-10-25 09:34:01.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267953 has a single transcript. 2021-10-25 09:34:01.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267954: ['FBtr0347529', 'FBtr0347530'] 2021-10-25 09:34:01.190 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8438463, 8438526), (8438702, 8438771), (8440931, 8441023)] 2021-10-25 09:34:01.191 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.191 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032849: ['FBtr0081338', 'FBtr0081339'] 2021-10-25 09:34:01.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14031595, 14031660), (14032370, 14032424), (14032643, 14032732), (14032897, 14032956), (14033683, 14033744)] 2021-10-25 09:34:01.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053558: ['FBtr0302577', 'FBtr0302578', 'FBtr0302579', 'FBtr0113470', 'FBtr0302034', 'FBtr0302035', 'FBtr0306614', 'FBtr0306615', 'FBtr0306616', 'FBtr0332941', 'FBtr0332942', 'FBtr0332943', 'FBtr0332944'] 2021-10-25 09:34:01.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039801: ['FBtr0085721', 'FBtr0085722', 'FBtr0306292'] 2021-10-25 09:34:01.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20096803, 20096865)] 2021-10-25 09:34:01.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18816238, 18816303), (18816238, 18816322)] 2021-10-25 09:34:01.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028374: ['FBtr0082639'] 2021-10-25 09:34:01.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028374 has a single transcript. 2021-10-25 09:34:01.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002891: ['FBtr0088831'] 2021-10-25 09:34:01.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002891 has a single transcript. 2021-10-25 09:34:01.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028375: ['FBtr0080852'] 2021-10-25 09:34:01.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028375 has a single transcript. 2021-10-25 09:34:01.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028377: ['FBtr0091756'] 2021-10-25 09:34:01.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002899: ['FBtr0076689'] 2021-10-25 09:34:01.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028377 has a single transcript. 2021-10-25 09:34:01.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002899 has a single transcript. 2021-10-25 09:34:01.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028379: ['FBtr0076683'] 2021-10-25 09:34:01.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028379 has a single transcript. 2021-10-25 09:34:01.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002901: ['FBtr0075122'] 2021-10-25 09:34:01.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002901 has a single transcript. 2021-10-25 09:34:01.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002905: ['FBtr0082662'] 2021-10-25 09:34:01.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002905 has a single transcript. 2021-10-25 09:34:01.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028380: ['FBtr0321324', 'FBtr0290284', 'FBtr0347258'] 2021-10-25 09:34:01.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002906: ['FBtr0082434'] 2021-10-25 09:34:01.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002906 has a single transcript. 2021-10-25 09:34:01.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267955: ['FBtr0347531'] 2021-10-25 09:34:01.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267955 has a single transcript. 2021-10-25 09:34:01.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032850: ['FBtr0081336', 'FBtr0303230', 'FBtr0331617', 'FBtr0331616'] 2021-10-25 09:34:01.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002909: ['FBtr0076839', 'FBtr0299690', 'FBtr0344453'] 2021-10-25 09:34:01.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30745871, 30745952)] 2021-10-25 09:34:01.299 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30745478, 30746290, 'FBtr0085722_exon_1') contains intron (30745871, 30745952) 2021-10-25 09:34:01.300 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30745693, 30746290, 'FBtr0306292_exon_1') contains intron (30745871, 30745952) 2021-10-25 09:34:01.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085722_exon_1', 'FBtr0306292_exon_1'] 2021-10-25 09:34:01.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267956: ['FBtr0347532'] 2021-10-25 09:34:01.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267956 has a single transcript. 2021-10-25 09:34:01.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267957: ['FBtr0347533'] 2021-10-25 09:34:01.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267957 has a single transcript. 2021-10-25 09:34:01.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267958: ['FBtr0347534'] 2021-10-25 09:34:01.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267958 has a single transcript. 2021-10-25 09:34:01.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036403: ['FBtr0075770'] 2021-10-25 09:34:01.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036403 has a single transcript. 2021-10-25 09:34:01.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267959: ['FBtr0347535'] 2021-10-25 09:34:01.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267959 has a single transcript. 2021-10-25 09:34:01.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036405: ['FBtr0075774', 'FBtr0302433'] 2021-10-25 09:34:01.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267960: ['FBtr0347536'] 2021-10-25 09:34:01.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267960 has a single transcript. 2021-10-25 09:34:01.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19295098, 19296142), (19295098, 19297045), (19296296, 19296350), (19296559, 19296612), (19296843, 19297045), (19297212, 19297276), (19297448, 19297518), (19298219, 19298277)] 2021-10-25 09:34:01.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267961: ['FBtr0347537'] 2021-10-25 09:34:01.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267961 has a single transcript. 2021-10-25 09:34:01.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267962: ['FBtr0347538'] 2021-10-25 09:34:01.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267962 has a single transcript. 2021-10-25 09:34:01.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267963: ['FBtr0347539'] 2021-10-25 09:34:01.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267963 has a single transcript. 2021-10-25 09:34:01.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7329363, 7329428), (7329637, 7329715), (7330239, 7330298), (7331231, 7331296), (7331231, 7331291), (7331336, 7331392), (7331336, 7331404)] 2021-10-25 09:34:01.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14051245, 14051322)] 2021-10-25 09:34:01.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14051205, 14052469, 'FBtr0075774_exon_1') contains intron (14051245, 14051322) 2021-10-25 09:34:01.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075774_exon_1'] 2021-10-25 09:34:01.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267964: ['FBtr0347542'] 2021-10-25 09:34:01.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267964 has a single transcript. 2021-10-25 09:34:01.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267965: ['FBtr0347543'] 2021-10-25 09:34:01.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267965 has a single transcript. 2021-10-25 09:34:01.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267966: ['FBtr0347544'] 2021-10-25 09:34:01.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267966 has a single transcript. 2021-10-25 09:34:01.386 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20097682, 20100943), (20097940, 20100943), (20098234, 20100943), (20098234, 20099070), (20099281, 20100943), (20101187, 20101630), (20101842, 20101911), (20102130, 20102194), (20102364, 20102425)] 2021-10-25 09:34:01.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.388 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039802: ['FBtr0445215'] 2021-10-25 09:34:01.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039802 has a single transcript. 2021-10-25 09:34:01.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267967: ['FBtr0074485', 'FBtr0340624'] 2021-10-25 09:34:01.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039804: ['FBtr0085708', 'FBtr0335414'] 2021-10-25 09:34:01.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036406: ['FBtr0075780'] 2021-10-25 09:34:01.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036406 has a single transcript. 2021-10-25 09:34:01.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036410: ['FBtr0075779', 'FBtr0334054', 'FBtr0347505'] 2021-10-25 09:34:01.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028381: ['FBtr0083304'] 2021-10-25 09:34:01.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028381 has a single transcript. 2021-10-25 09:34:01.446 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17631129, 17631181), (17631369, 17631526), (17631811, 17631881), (17631817, 17631881)] 2021-10-25 09:34:01.446 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.446 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30828465, 30833641), (30828480, 30833641), (30833863, 30838294), (30840029, 30840444)] 2021-10-25 09:34:01.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028382: ['FBtr0086945'] 2021-10-25 09:34:01.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028382 has a single transcript. 2021-10-25 09:34:01.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028387: ['FBtr0079443', 'FBtr0308610', 'FBtr0332523'] 2021-10-25 09:34:01.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002914: ['FBtr0074169', 'FBtr0074170', 'FBtr0074171', 'FBtr0074173'] 2021-10-25 09:34:01.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14083864, 14083963)] 2021-10-25 09:34:01.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267969: ['FBtr0347547', 'FBtr0347548', 'FBtr0347549'] 2021-10-25 09:34:01.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6926298, 6928508), (6926298, 6926472), (6926298, 6930248), (6926298, 6927389), (6926298, 6926669), (6926591, 6926669), (6926821, 6927389), (6926821, 6928508), (6928148, 6928508), (6928151, 6928508), (6928262, 6928508), (6928836, 6929072), (6928836, 6929822), (6928836, 6930248), (6929273, 6929849), (6929273, 6929954), (6929273, 6929822), (6930098, 6930248), (6930370, 6931062), (6930370, 6931842), (6930370, 6933123), (6930370, 6934065), (6932643, 6933123), (6932697, 6933123), (6932697, 6934065), (6933441, 6934065), (6933927, 6934065), (6934180, 6934805), (6935108, 6935422), (6935108, 6935214), (6935295, 6935422), (6935680, 6935740), (6936195, 6938384), (6938458, 6939281), (6939343, 6962879), (6963095, 6970892)] 2021-10-25 09:34:01.564 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6927389, 6928836, 'FBtr0302578_exon_14') contains intron (6928148, 6928508) 2021-10-25 09:34:01.565 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6927389, 6928836, 'FBtr0302579_exon_14') contains intron (6928148, 6928508) 2021-10-25 09:34:01.566 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6927389, 6928836, 'FBtr0302034_exon_14') contains intron (6928148, 6928508) 2021-10-25 09:34:01.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302578_exon_14', 'FBtr0302579_exon_14', 'FBtr0302034_exon_14'] 2021-10-25 09:34:01.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039805: ['FBtr0085710'] 2021-10-25 09:34:01.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039805 has a single transcript. 2021-10-25 09:34:01.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039806: ['FBtr0085719'] 2021-10-25 09:34:01.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039806 has a single transcript. 2021-10-25 09:34:01.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7413308, 7413381), (7414007, 7414073), (7414231, 7414291), (7414664, 7417372), (7417478, 7421456), (7417478, 7417546), (7421614, 7421688), (7421784, 7421843)] 2021-10-25 09:34:01.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032851: ['FBtr0089388'] 2021-10-25 09:34:01.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032851 has a single transcript. 2021-10-25 09:34:01.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039807: ['FBtr0085718'] 2021-10-25 09:34:01.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039807 has a single transcript. 2021-10-25 09:34:01.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032853: ['FBtr0081378', 'FBtr0345683'] 2021-10-25 09:34:01.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039808: ['FBtr0346757', 'FBtr0346758', 'FBtr0344715', 'FBtr0344716'] 2021-10-25 09:34:01.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15855725, 15855789), (15857545, 15857716), (15857545, 15857640), (15857613, 15857676)] 2021-10-25 09:34:01.604 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15855789, 15857823, 'FBtr0074173_exon_1') contains intron (15857545, 15857716) 2021-10-25 09:34:01.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074173_exon_1'] 2021-10-25 09:34:01.604 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.615 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4064122, 4064446), (4064122, 4064430)] 2021-10-25 09:34:01.616 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4062858, 4064506, 'FBtr0347549_exon_1') contains intron (4064122, 4064446) 2021-10-25 09:34:01.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347549_exon_1'] 2021-10-25 09:34:01.617 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036411: ['FBtr0075748', 'FBtr0330178'] 2021-10-25 09:34:01.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20134281, 20134331), (20134723, 20134781)] 2021-10-25 09:34:01.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14104887, 14106541), (14107158, 14107807)] 2021-10-25 09:34:01.674 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30877997, 30878146), (30878581, 30878691), (30879054, 30879132), (30879242, 30879353), (30879906, 30880762)] 2021-10-25 09:34:01.681 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075748': ['FBtr0330178']} 2021-10-25 09:34:01.681 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330178']] 2021-10-25 09:34:01.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036414: ['FBtr0089524', 'FBtr0321258'] 2021-10-25 09:34:01.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028394: ['FBtr0079686', 'FBtr0079687', 'FBtr0079688', 'FBtr0079689', 'FBtr0333417', 'FBtr0333418'] 2021-10-25 09:34:01.693 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0346757': ['FBtr0344716'], 'FBtr0346758': ['FBtr0344715']} 2021-10-25 09:34:01.693 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344716'], ['FBtr0344715']] 2021-10-25 09:34:01.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032856: ['FBtr0081371'] 2021-10-25 09:34:01.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032856 has a single transcript. 2021-10-25 09:34:01.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032857: ['FBtr0081369', 'FBtr0081370', 'FBtr0336750'] 2021-10-25 09:34:01.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267970: ['FBtr0347551'] 2021-10-25 09:34:01.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267970 has a single transcript. 2021-10-25 09:34:01.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14186538, 14186596), (14186541, 14186596), (14187019, 14187087), (14187196, 14187257), (14187409, 14187462), (14187689, 14187748), (14188262, 14188320), (14188600, 14188671), (14188898, 14189023)] 2021-10-25 09:34:01.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267972: ['FBtr0077813', 'FBtr0334758'] 2021-10-25 09:34:01.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039809: ['FBtr0085715'] 2021-10-25 09:34:01.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039809 has a single transcript. 2021-10-25 09:34:01.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002917: ['FBtr0344822', 'FBtr0344823'] 2021-10-25 09:34:01.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039810: ['FBtr0085752'] 2021-10-25 09:34:01.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039810 has a single transcript. 2021-10-25 09:34:01.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039811: ['FBtr0085751'] 2021-10-25 09:34:01.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039811 has a single transcript. 2021-10-25 09:34:01.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039812: ['FBtr0085731'] 2021-10-25 09:34:01.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039812 has a single transcript. 2021-10-25 09:34:01.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20387592, 20399205), (20387592, 20414333), (20387592, 20399091)] 2021-10-25 09:34:01.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039816: ['FBtr0085741', 'FBtr0334547'] 2021-10-25 09:34:01.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1974480, 1974563), (1974818, 1974880), (1974991, 1975060)] 2021-10-25 09:34:01.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036415: ['FBtr0075737', 'FBtr0075736'] 2021-10-25 09:34:01.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14266708, 14267606), (14268903, 14268958), (14269071, 14269132), (14269243, 14269307), (14269451, 14269542), (14271072, 14271145), (14271277, 14271374), (14271277, 14271347), (14271713, 14271796), (14272547, 14272626), (14272926, 14273821), (14274016, 14274203), (14274390, 14274545), (14274800, 14275132), (14275406, 14275467), (14275630, 14275701)] 2021-10-25 09:34:01.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31091562, 31091685), (31091773, 31092045), (31091773, 31092054), (31092543, 31096954)] 2021-10-25 09:34:01.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8529367, 8535917), (8529557, 8535917), (8535845, 8535917), (8536079, 8536206), (8536268, 8536893), (8537071, 8537230), (8537463, 8540457)] 2021-10-25 09:34:01.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8535785, 8536079, 'FBtr0079688_exon_1') contains intron (8535845, 8535917) 2021-10-25 09:34:01.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8535785, 8536079, 'FBtr0333417_exon_1') contains intron (8535845, 8535917) 2021-10-25 09:34:01.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079688_exon_1', 'FBtr0333417_exon_1'] 2021-10-25 09:34:01.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14218290, 14218382), (14218290, 14218344)] 2021-10-25 09:34:01.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267975: ['FBtr0083745', 'FBtr0310064', 'FBtr0344554'] 2021-10-25 09:34:01.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032858: ['FBtr0081367', 'FBtr0346417'] 2021-10-25 09:34:01.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002921: ['FBtr0089511', 'FBtr0089509', 'FBtr0089513', 'FBtr0089514', 'FBtr0089515', 'FBtr0089516', 'FBtr0089510', 'FBtr0089512', 'FBtr0300191', 'FBtr0333324', 'FBtr0333325'] 2021-10-25 09:34:01.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039817: ['FBtr0290201'] 2021-10-25 09:34:01.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039817 has a single transcript. 2021-10-25 09:34:01.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039818: ['FBtr0085739'] 2021-10-25 09:34:01.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039818 has a single transcript. 2021-10-25 09:34:01.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036416: ['FBtr0075740'] 2021-10-25 09:34:01.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036416 has a single transcript. 2021-10-25 09:34:01.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039820: ['FBtr0085736'] 2021-10-25 09:34:01.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039820 has a single transcript. 2021-10-25 09:34:01.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036417: ['FBtr0075741', 'FBtr0321257'] 2021-10-25 09:34:01.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039821: ['FBtr0085737', 'FBtr0309194', 'FBtr0309195'] 2021-10-25 09:34:01.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19218031, 19218158), (19218338, 19218401), (19218511, 19218683), (19218511, 19218968), (19218764, 19219188), (19219046, 19219188), (19219340, 19219404), (19219516, 19219596), (19219627, 19226014), (19226070, 19226480)] 2021-10-25 09:34:01.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20416106, 20416163)] 2021-10-25 09:34:01.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261553: ['FBtr0330283', 'FBtr0302700', 'FBtr0302696', 'FBtr0302697', 'FBtr0302698', 'FBtr0302699', 'FBtr0304933', 'FBtr0304934', 'FBtr0339906', 'FBtr0339907', 'FBtr0345849'] 2021-10-25 09:34:01.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14236789, 14237020), (14237995, 14238057), (14238001, 14238057)] 2021-10-25 09:34:01.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31129168, 31129227)] 2021-10-25 09:34:01.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:01.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:01.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032859: ['FBtr0081358', 'FBtr0346418'] 2021-10-25 09:34:01.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036419: ['FBtr0075744'] 2021-10-25 09:34:01.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036419 has a single transcript. 2021-10-25 09:34:02.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036421: ['FBtr0113170', 'FBtr0333022'] 2021-10-25 09:34:02.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267976: ['FBtr0113781'] 2021-10-25 09:34:02.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267976 has a single transcript. 2021-10-25 09:34:02.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20417667, 20420318), (20420412, 20420489), (20420589, 20420647), (20420834, 20420896), (20421117, 20422144), (20422236, 20422301), (20422411, 20422468)] 2021-10-25 09:34:02.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267977: ['FBtr0074074'] 2021-10-25 09:34:02.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267977 has a single transcript. 2021-10-25 09:34:02.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267978: ['FBtr0086058', 'FBtr0086059', 'FBtr0300504', 'FBtr0335274'] 2021-10-25 09:34:02.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:02.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039827: ['FBtr0085755'] 2021-10-25 09:34:02.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039827 has a single transcript. 2021-10-25 09:34:02.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039828: ['FBtr0085757'] 2021-10-25 09:34:02.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039828 has a single transcript. 2021-10-25 09:34:02.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028396: ['FBtr0083971'] 2021-10-25 09:34:02.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028396 has a single transcript. 2021-10-25 09:34:02.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039829: ['FBtr0085776'] 2021-10-25 09:34:02.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039829 has a single transcript. 2021-10-25 09:34:02.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032860: ['FBtr0307019', 'FBtr0307020'] 2021-10-25 09:34:02.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028397: ['FBtr0074255', 'FBtr0301652', 'FBtr0310317', 'FBtr0310446'] 2021-10-25 09:34:02.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039830: ['FBtr0085772', 'FBtr0085773', 'FBtr0085774', 'FBtr0305121', 'FBtr0305122', 'FBtr0306237'] 2021-10-25 09:34:02.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036422: ['FBtr0075729'] 2021-10-25 09:34:02.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036422 has a single transcript. 2021-10-25 09:34:02.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20948829, 20962214), (20948829, 20960725), (20948829, 20959236), (20958167, 20959236), (20958167, 20960725), (20958167, 20963724), (20959380, 20962214), (20959380, 20960725), (20960825, 20963724), (20962295, 20963724), (20963856, 20963926), (20964193, 20964257), (20966039, 20966397), (20966613, 20970882), (20966613, 20967107), (20966613, 20968391), (20966613, 20966804), (20966899, 20973172), (20967202, 20973172), (20968486, 20973172), (20970977, 20973172), (20973347, 20973505), (20973738, 20973810)] 2021-10-25 09:34:02.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036423: ['FBtr0273239', 'FBtr0333040'] 2021-10-25 09:34:02.117 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20966397, 20966899, 'FBtr0089512_exon_6') contains intron (20966613, 20966804) 2021-10-25 09:34:02.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089512_exon_6'] 2021-10-25 09:34:02.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20423273, 20423350), (20423273, 20424274), (20423480, 20424274), (20424427, 20424487)] 2021-10-25 09:34:02.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5708106, 5708182), (5708379, 5708610), (5708867, 5708925), (5709099, 5709158), (5709099, 5716648), (5716788, 5717281), (5717498, 5717554), (5717763, 5727453), (5717763, 5725820), (5717766, 5725820)] 2021-10-25 09:34:02.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053626: ['FBtr0290008'] 2021-10-25 09:34:02.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053626 has a single transcript. 2021-10-25 09:34:02.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053627: ['FBtr0091604'] 2021-10-25 09:34:02.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053627 has a single transcript. 2021-10-25 09:34:02.159 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14410901, 14411080), (14411272, 14411499), (14411810, 14412034), (14412136, 14412255), (14412184, 14412255)] 2021-10-25 09:34:02.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053629: ['FBtr0091606'] 2021-10-25 09:34:02.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053629 has a single transcript. 2021-10-25 09:34:02.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16080702, 16080803), (16080705, 16080803), (16080957, 16081041), (16081282, 16081785), (16081282, 16081791), (16081962, 16082033), (16082975, 16087210), (16082975, 16089260), (16082975, 16091146)] 2021-10-25 09:34:02.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16080803, 16081282, 'FBtr0074255_exon_4') contains intron (16080957, 16081041) 2021-10-25 09:34:02.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16080803, 16081282, 'FBtr0310446_exon_4') contains intron (16080957, 16081041) 2021-10-25 09:34:02.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074255_exon_4', 'FBtr0310446_exon_4'] 2021-10-25 09:34:02.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.176 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11214574, 11216585), (11215810, 11216585), (11215814, 11216585), (11215951, 11216585), (11215987, 11216585), (11217282, 11222614), (11217282, 11222617), (11223565, 11223703), (11224224, 11224992), (11226568, 11226635), (11226801, 11227672), (11226801, 11229112), (11228088, 11229112)] 2021-10-25 09:34:02.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053630: ['FBtr0091607'] 2021-10-25 09:34:02.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053630 has a single transcript. 2021-10-25 09:34:02.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.179 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053631: ['FBtr0091608'] 2021-10-25 09:34:02.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053631 has a single transcript. 2021-10-25 09:34:02.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032863: ['FBtr0081362', 'FBtr0332969'] 2021-10-25 09:34:02.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053632: ['FBtr0091609'] 2021-10-25 09:34:02.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053632 has a single transcript. 2021-10-25 09:34:02.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053635: ['FBtr0091612'] 2021-10-25 09:34:02.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053635 has a single transcript. 2021-10-25 09:34:02.214 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330283': ['FBtr0302696']} 2021-10-25 09:34:02.214 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0302696']] 2021-10-25 09:34:02.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31217177, 31217739), (31217944, 31218792), (31217944, 31218942), (31219048, 31219109), (31219048, 31219173), (31219048, 31219535)] 2021-10-25 09:34:02.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053639: ['FBtr0091616', 'FBtr0302908', 'FBtr0302909', 'FBtr0332379'] 2021-10-25 09:34:02.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036426: ['FBtr0290282'] 2021-10-25 09:34:02.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036426 has a single transcript. 2021-10-25 09:34:02.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036427: ['FBtr0333038', 'FBtr0333039'] 2021-10-25 09:34:02.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20460390, 20460448), (20461050, 20461110)] 2021-10-25 09:34:02.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14520026, 14520097), (14520666, 14521285)] 2021-10-25 09:34:02.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267982: ['FBtr0347579'] 2021-10-25 09:34:02.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267982 has a single transcript. 2021-10-25 09:34:02.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267983: ['FBtr0347580'] 2021-10-25 09:34:02.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267983 has a single transcript. 2021-10-25 09:34:02.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032864: ['FBtr0081363', 'FBtr0332970'] 2021-10-25 09:34:02.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267984: ['FBtr0347581'] 2021-10-25 09:34:02.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267984 has a single transcript. 2021-10-25 09:34:02.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267985: ['FBtr0347582'] 2021-10-25 09:34:02.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267985 has a single transcript. 2021-10-25 09:34:02.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267986: ['FBtr0347583', 'FBtr0347584'] 2021-10-25 09:34:02.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028398: ['FBtr0077717'] 2021-10-25 09:34:02.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028398 has a single transcript. 2021-10-25 09:34:02.319 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18213117, 18213229), (18213899, 18213950), (18214044, 18214465), (18214615, 18218452), (18218606, 18219890), (18220056, 18220661), (18220825, 18225096), (18220828, 18225096), (18225524, 18225647)] 2021-10-25 09:34:02.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18212961, 18213899, 'FBtr0091616_exon_7') contains intron (18213117, 18213229) 2021-10-25 09:34:02.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18225096, 18226076, 'FBtr0091616_exon_1') contains intron (18225524, 18225647) 2021-10-25 09:34:02.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18212961, 18213899, 'FBtr0302908_exon_8') contains intron (18213117, 18213229) 2021-10-25 09:34:02.321 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18210811, 18213899, 'FBtr0302909_exon_7') contains intron (18213117, 18213229) 2021-10-25 09:34:02.321 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18225096, 18226076, 'FBtr0302909_exon_1') contains intron (18225524, 18225647) 2021-10-25 09:34:02.321 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18225096, 18226076, 'FBtr0332379_exon_1') contains intron (18225524, 18225647) 2021-10-25 09:34:02.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0091616_exon_7', 'FBtr0091616_exon_1', 'FBtr0302908_exon_8', 'FBtr0302909_exon_7', 'FBtr0302909_exon_1', 'FBtr0332379_exon_1'] 2021-10-25 09:34:02.321 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028399: ['FBtr0075389', 'FBtr0331174', 'FBtr0310550', 'FBtr0310551', 'FBtr0310552', 'FBtr0310553'] 2021-10-25 09:34:02.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036428: ['FBtr0075723', 'FBtr0075724', 'FBtr0333037'] 2021-10-25 09:34:02.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:02.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23239831, 23240169), (23240022, 23240169)] 2021-10-25 09:34:02.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14542295, 14542354), (14542667, 14542732), (14542939, 14547116), (14547482, 14549997), (14547482, 14550536), (14550159, 14550536)] 2021-10-25 09:34:02.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032867: ['FBtr0081381'] 2021-10-25 09:34:02.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032867 has a single transcript. 2021-10-25 09:34:02.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032868: ['FBtr0081382'] 2021-10-25 09:34:02.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032868 has a single transcript. 2021-10-25 09:34:02.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267987: ['FBtr0347585'] 2021-10-25 09:34:02.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267987 has a single transcript. 2021-10-25 09:34:02.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032869: ['FBtr0081406'] 2021-10-25 09:34:02.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032869 has a single transcript. 2021-10-25 09:34:02.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267988: ['FBtr0347586'] 2021-10-25 09:34:02.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267988 has a single transcript. 2021-10-25 09:34:02.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032870: ['FBtr0081384'] 2021-10-25 09:34:02.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267989: ['FBtr0347587'] 2021-10-25 09:34:02.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032870 has a single transcript. 2021-10-25 09:34:02.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267989 has a single transcript. 2021-10-25 09:34:02.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032871: ['FBtr0081387'] 2021-10-25 09:34:02.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032871 has a single transcript. 2021-10-25 09:34:02.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267990: ['FBtr0347588'] 2021-10-25 09:34:02.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267990 has a single transcript. 2021-10-25 09:34:02.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032873: ['FBtr0081388', 'FBtr0339520'] 2021-10-25 09:34:02.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267991: ['FBtr0347589', 'FBtr0347590'] 2021-10-25 09:34:02.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039831: ['FBtr0085758', 'FBtr0113312', 'FBtr0335408', 'FBtr0335409'] 2021-10-25 09:34:02.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16412880, 16413247), (16413803, 16413868), (16413978, 16414037), (16414221, 16414283), (16414493, 16414802), (16414493, 16414805), (16414493, 16414814), (16414493, 16414820), (16414493, 16414793), (16414956, 16415001), (16414956, 16415020)] 2021-10-25 09:34:02.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053640: ['FBtr0332506'] 2021-10-25 09:34:02.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053640 has a single transcript. 2021-10-25 09:34:02.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053641: ['FBtr0091618'] 2021-10-25 09:34:02.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053641 has a single transcript. 2021-10-25 09:34:02.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:02.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20656601, 20656707), (20656830, 20656972), (20657209, 20657267), (20657475, 20657536), (20658155, 20658211), (20658155, 20658223), (20658404, 20658461), (20658601, 20658668)] 2021-10-25 09:34:02.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053642: ['FBtr0091619'] 2021-10-25 09:34:02.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053642 has a single transcript. 2021-10-25 09:34:02.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036433: ['FBtr0075677', 'FBtr0075678', 'FBtr0301239'] 2021-10-25 09:34:02.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053643: ['FBtr0091620'] 2021-10-25 09:34:02.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053643 has a single transcript. 2021-10-25 09:34:02.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053644: ['FBtr0091621'] 2021-10-25 09:34:02.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053644 has a single transcript. 2021-10-25 09:34:02.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053645: ['FBtr0332507'] 2021-10-25 09:34:02.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053645 has a single transcript. 2021-10-25 09:34:02.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053647: ['FBtr0091624'] 2021-10-25 09:34:02.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053647 has a single transcript. 2021-10-25 09:34:02.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053648: ['FBtr0343695', 'FBtr0343696'] 2021-10-25 09:34:02.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267992: ['FBtr0347591'] 2021-10-25 09:34:02.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267992 has a single transcript. 2021-10-25 09:34:02.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032876: ['FBtr0081399', 'FBtr0081401'] 2021-10-25 09:34:02.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267993: ['FBtr0347592'] 2021-10-25 09:34:02.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267993 has a single transcript. 2021-10-25 09:34:02.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267994: ['FBtr0347593'] 2021-10-25 09:34:02.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267994 has a single transcript. 2021-10-25 09:34:02.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267995: ['FBtr0347594'] 2021-10-25 09:34:02.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267995 has a single transcript. 2021-10-25 09:34:02.611 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31220842, 31220912), (31221465, 31225812), (31225461, 31225812), (31226076, 31226140), (31226249, 31226365), (31226503, 31226566), (31227078, 31228696)] 2021-10-25 09:34:02.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14622907, 14626840), (14622935, 14626840), (14623033, 14627019), (14626894, 14627019), (14627126, 14627334), (14627495, 14627555)] 2021-10-25 09:34:02.616 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0267996: ['FBtr0347595'] 2021-10-25 09:34:02.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0267996 has a single transcript. 2021-10-25 09:34:02.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0268063: ['FBtr0076793', 'FBtr0332144'] 2021-10-25 09:34:02.637 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14524573, 14525042), (14524991, 14525042), (14525186, 14525242), (14525413, 14525469)] 2021-10-25 09:34:02.639 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20681533, 20681618)] 2021-10-25 09:34:02.640 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20678920, 20681626, 'FBtr0081401_exon_1') contains intron (20681533, 20681618) 2021-10-25 09:34:02.640 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081401_exon_1'] 2021-10-25 09:34:02.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002922: ['FBtr0084472', 'FBtr0301445'] 2021-10-25 09:34:02.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261554: ['FBtr0302702', 'FBtr0302703', 'FBtr0302704', 'FBtr0302706', 'FBtr0302707', 'FBtr0302701', 'FBtr0342885', 'FBtr0342886', 'FBtr0344188', 'FBtr0344189'] 2021-10-25 09:34:02.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7519977, 7524486), (7525495, 7525556), (7525755, 7526094)] 2021-10-25 09:34:02.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032877: ['FBtr0081391', 'FBtr0336825'] 2021-10-25 09:34:02.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053653: ['FBtr0307333', 'FBtr0307334', 'FBtr0091630', 'FBtr0091631', 'FBtr0333702'] 2021-10-25 09:34:02.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23713139, 23713195), (23713139, 23713207), (23713274, 23716362), (23716437, 23716500), (23716623, 23717428)] 2021-10-25 09:34:02.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036436: ['FBtr0075712'] 2021-10-25 09:34:02.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036436 has a single transcript. 2021-10-25 09:34:02.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036437: ['FBtr0075684'] 2021-10-25 09:34:02.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036437 has a single transcript. 2021-10-25 09:34:02.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036438: ['FBtr0075685'] 2021-10-25 09:34:02.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036438 has a single transcript. 2021-10-25 09:34:02.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036439: ['FBtr0075711'] 2021-10-25 09:34:02.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036439 has a single transcript. 2021-10-25 09:34:02.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:02.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036440: ['FBtr0075710', 'FBtr0333018'] 2021-10-25 09:34:02.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0270924: ['FBtr0079865'] 2021-10-25 09:34:02.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0270924 has a single transcript. 2021-10-25 09:34:02.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0270925: ['FBtr0083826', 'FBtr0083827', 'FBtr0083828', 'FBtr0273258', 'FBtr0273259'] 2021-10-25 09:34:02.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028400: ['FBtr0081578'] 2021-10-25 09:34:02.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028400 has a single transcript. 2021-10-25 09:34:02.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039832: ['FBtr0085771'] 2021-10-25 09:34:02.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039832 has a single transcript. 2021-10-25 09:34:02.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002924: ['FBtr0085534', 'FBtr0344976'] 2021-10-25 09:34:02.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028402: ['FBtr0078288', 'FBtr0304820'] 2021-10-25 09:34:02.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039833: ['FBtr0085770'] 2021-10-25 09:34:02.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039833 has a single transcript. 2021-10-25 09:34:02.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14699306, 14699670)] 2021-10-25 09:34:02.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.821 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032878: ['FBtr0081396'] 2021-10-25 09:34:02.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032878 has a single transcript. 2021-10-25 09:34:02.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039835: ['FBtr0085759'] 2021-10-25 09:34:02.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039835 has a single transcript. 2021-10-25 09:34:02.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032879: ['FBtr0081395', 'FBtr0335150'] 2021-10-25 09:34:02.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039836: ['FBtr0085767'] 2021-10-25 09:34:02.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039836 has a single transcript. 2021-10-25 09:34:02.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039838: ['FBtr0113313'] 2021-10-25 09:34:02.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039838 has a single transcript. 2021-10-25 09:34:02.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039839: ['FBtr0085764'] 2021-10-25 09:34:02.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039839 has a single transcript. 2021-10-25 09:34:02.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039840: ['FBtr0085766', 'FBtr0347502'] 2021-10-25 09:34:02.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21031921, 21031980), (21033051, 21033115)] 2021-10-25 09:34:02.879 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21031824, 21033051, 'FBtr0304820_exon_1') contains intron (21031921, 21031980) 2021-10-25 09:34:02.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304820_exon_1'] 2021-10-25 09:34:02.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29805647, 29805706), (29806344, 29806403)] 2021-10-25 09:34:02.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20727892, 20727967), (20728366, 20728428), (20729020, 20729075), (20729334, 20729482), (20729665, 20729876), (20730101, 20730159)] 2021-10-25 09:34:02.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036441: ['FBtr0075687'] 2021-10-25 09:34:02.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036441 has a single transcript. 2021-10-25 09:34:02.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036442: ['FBtr0075689'] 2021-10-25 09:34:02.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036442 has a single transcript. 2021-10-25 09:34:02.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1231014, 1233128), (1232190, 1233128), (1233510, 1234678), (1234799, 1241729), (1241897, 1243476), (1243652, 1243718), (1243950, 1244013), (1244264, 1245100), (1244264, 1244336), (1244351, 1245100), (1245224, 1245284), (1245331, 1245378), (1245523, 1245576), (1245683, 1245751), (1245927, 1245989), (1246193, 1247101), (1246196, 1247101), (1247238, 1248302), (1248490, 1248546), (1248836, 1250770), (1250883, 1254005), (1250883, 1255841), (1254212, 1255841), (1255998, 1261951), (1262093, 1262411), (1262093, 1264655), (1262579, 1264655), (1264965, 1265028), (1265409, 1270731), (1270868, 1270924)] 2021-10-25 09:34:02.899 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1245100, 1245331, 'FBtr0307333_exon_9') contains intron (1245224, 1245284) 2021-10-25 09:34:02.900 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1245100, 1245331, 'FBtr0307334_exon_9') contains intron (1245224, 1245284) 2021-10-25 09:34:02.900 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1245100, 1245331, 'FBtr0091630_exon_8') contains intron (1245224, 1245284) 2021-10-25 09:34:02.901 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1245100, 1245331, 'FBtr0333702_exon_9') contains intron (1245224, 1245284) 2021-10-25 09:34:02.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307333_exon_9', 'FBtr0307334_exon_9', 'FBtr0091630_exon_8', 'FBtr0333702_exon_9'] 2021-10-25 09:34:02.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036443: ['FBtr0075709'] 2021-10-25 09:34:02.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036443 has a single transcript. 2021-10-25 09:34:02.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31304339, 31304991)] 2021-10-25 09:34:02.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036446: ['FBtr0075690', 'FBtr0333044'] 2021-10-25 09:34:02.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20014018, 20014287), (20016757, 20016821), (20016757, 20016830), (20016757, 20016825), (20017016, 20017077), (20017858, 20017914)] 2021-10-25 09:34:02.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028406: ['FBtr0080478'] 2021-10-25 09:34:02.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028406 has a single transcript. 2021-10-25 09:34:02.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032880: ['FBtr0081393', 'FBtr0335149'] 2021-10-25 09:34:02.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028407: ['FBtr0087979', 'FBtr0087980'] 2021-10-25 09:34:02.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002926: ['FBtr0076984'] 2021-10-25 09:34:02.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002926 has a single transcript. 2021-10-25 09:34:02.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21296213, 21303884), (21296213, 21299836), (21298487, 21303884), (21299397, 21303884), (21300371, 21303884), (21302485, 21303884), (21304019, 21304078), (21304276, 21304334), (21307099, 21307167), (21307346, 21307403), (21307639, 21307704), (21307875, 21307933), (21308158, 21308291), (21308158, 21308451), (21308321, 21308451), (21308548, 21309628), (21309895, 21309955)] 2021-10-25 09:34:02.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14762396, 14763052), (14763114, 14763203), (14763262, 14763753), (14763434, 14763753)] 2021-10-25 09:34:02.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002930: ['FBtr0089052'] 2021-10-25 09:34:02.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002930 has a single transcript. 2021-10-25 09:34:02.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039844: ['FBtr0085785', 'FBtr0085786', 'FBtr0334549', 'FBtr0334550'] 2021-10-25 09:34:02.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002931: ['FBtr0290323', 'FBtr0330637'] 2021-10-25 09:34:02.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20731503, 20731563), (20731723, 20731777), (20732760, 20732821), (20733016, 20733925)] 2021-10-25 09:34:02.987 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:02.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12055218, 12055973), (12055218, 12055968), (12056386, 12061507), (12061717, 12061820)] 2021-10-25 09:34:02.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:02.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036447: ['FBtr0075701'] 2021-10-25 09:34:03.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036447 has a single transcript. 2021-10-25 09:34:03.012 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(84277, 87019)] 2021-10-25 09:34:03.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036448: ['FBtr0075700'] 2021-10-25 09:34:03.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036448 has a single transcript. 2021-10-25 09:34:03.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036449: ['FBtr0075699', 'FBtr0300190'] 2021-10-25 09:34:03.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032881: ['FBtr0081460', 'FBtr0335148'] 2021-10-25 09:34:03.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028408: ['FBtr0088597', 'FBtr0112930', 'FBtr0332998', 'FBtr0304798'] 2021-10-25 09:34:03.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31382335, 31387075), (31384499, 31387075), (31387398, 31387933), (31388180, 31389036), (31389110, 31389168), (31389314, 31389380), (31389595, 31389658), (31389888, 31389945), (31390198, 31390297), (31390198, 31390588), (31390359, 31390588)] 2021-10-25 09:34:03.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.076 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14776985, 14777105), (14776985, 14777338), (14777241, 14777338), (14777607, 14777677), (14777766, 14777932), (14778041, 14778110), (14778277, 14778339), (14779022, 14785918)] 2021-10-25 09:34:03.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002932: ['FBtr0082001', 'FBtr0082002', 'FBtr0082003', 'FBtr0082004', 'FBtr0300414'] 2021-10-25 09:34:03.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20752015, 20752088)] 2021-10-25 09:34:03.095 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.096 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053654: ['FBtr0091633'] 2021-10-25 09:34:03.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053654 has a single transcript. 2021-10-25 09:34:03.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053658: ['FBtr0091637'] 2021-10-25 09:34:03.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053658 has a single transcript. 2021-10-25 09:34:03.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053664: ['FBtr0302417'] 2021-10-25 09:34:03.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053664 has a single transcript. 2021-10-25 09:34:03.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053665: ['FBtr0302414'] 2021-10-25 09:34:03.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053665 has a single transcript. 2021-10-25 09:34:03.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0270926: ['FBtr0089463'] 2021-10-25 09:34:03.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0270926 has a single transcript. 2021-10-25 09:34:03.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053666: ['FBtr0302415'] 2021-10-25 09:34:03.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053666 has a single transcript. 2021-10-25 09:34:03.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0270927: ['FBtr0085858'] 2021-10-25 09:34:03.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9292869, 9297265), (9293682, 9297265), (9295782, 9297265), (9297536, 9298266)] 2021-10-25 09:34:03.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0270927 has a single transcript. 2021-10-25 09:34:03.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053667: ['FBtr0302416'] 2021-10-25 09:34:03.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053667 has a single transcript. 2021-10-25 09:34:03.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0270928: ['FBtr0083671'] 2021-10-25 09:34:03.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0270928 has a single transcript. 2021-10-25 09:34:03.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036450: ['FBtr0075691'] 2021-10-25 09:34:03.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036450 has a single transcript. 2021-10-25 09:34:03.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053668: ['FBtr0302418'] 2021-10-25 09:34:03.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053668 has a single transcript. 2021-10-25 09:34:03.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0275432: ['FBtr0392913'] 2021-10-25 09:34:03.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0275432 has a single transcript. 2021-10-25 09:34:03.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036451: ['FBtr0075693', 'FBtr0333074', 'FBtr0333075'] 2021-10-25 09:34:03.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053669: ['FBtr0302419'] 2021-10-25 09:34:03.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053669 has a single transcript. 2021-10-25 09:34:03.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0275433: ['FBtr0392914'] 2021-10-25 09:34:03.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0275433 has a single transcript. 2021-10-25 09:34:03.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053673: ['FBtr0307516'] 2021-10-25 09:34:03.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053673 has a single transcript. 2021-10-25 09:34:03.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032882: ['FBtr0081409'] 2021-10-25 09:34:03.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032882 has a single transcript. 2021-10-25 09:34:03.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0275434: ['FBtr0392915', 'FBtr0392916'] 2021-10-25 09:34:03.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053679: ['FBtr0091659'] 2021-10-25 09:34:03.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053679 has a single transcript. 2021-10-25 09:34:03.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032883: ['FBtr0081459', 'FBtr0335147'] 2021-10-25 09:34:03.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053680: ['FBtr0091660'] 2021-10-25 09:34:03.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053680 has a single transcript. 2021-10-25 09:34:03.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9022041, 9022103), (9022044, 9022103), (9023845, 9039154), (9023845, 9033178)] 2021-10-25 09:34:03.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053687: ['FBtr0345888'] 2021-10-25 09:34:03.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053687 has a single transcript. 2021-10-25 09:34:03.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053688: ['FBtr0091668'] 2021-10-25 09:34:03.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053688 has a single transcript. 2021-10-25 09:34:03.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039846: ['FBtr0085811', 'FBtr0085812', 'FBtr0300881', 'FBtr0334553'] 2021-10-25 09:34:03.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:03.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053689: ['FBtr0346809'] 2021-10-25 09:34:03.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053689 has a single transcript. 2021-10-25 09:34:03.206 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.206 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053690: ['FBtr0091670'] 2021-10-25 09:34:03.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053690 has a single transcript. 2021-10-25 09:34:03.217 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14790072, 14791870), (14790604, 14791870), (14791550, 14791870), (14791960, 14792027), (14792460, 14792660), (14793264, 14793742), (14798449, 14798564)] 2021-10-25 09:34:03.218 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.218 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.220 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20754750, 20754808), (20754937, 20754992), (20755265, 20755319), (20755433, 20755487), (20755880, 20755941)] 2021-10-25 09:34:03.221 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053696: ['FBtr0091684'] 2021-10-25 09:34:03.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053696 has a single transcript. 2021-10-25 09:34:03.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053700: ['FBtr0301069'] 2021-10-25 09:34:03.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053700 has a single transcript. 2021-10-25 09:34:03.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053701: ['FBtr0091689'] 2021-10-25 09:34:03.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053701 has a single transcript. 2021-10-25 09:34:03.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053702: ['FBtr0091690'] 2021-10-25 09:34:03.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053702 has a single transcript. 2021-10-25 09:34:03.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053703: ['FBtr0091691'] 2021-10-25 09:34:03.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053703 has a single transcript. 2021-10-25 09:34:03.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0275436: ['FBtr0087594'] 2021-10-25 09:34:03.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0275436 has a single transcript. 2021-10-25 09:34:03.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053704: ['FBtr0091692'] 2021-10-25 09:34:03.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053704 has a single transcript. 2021-10-25 09:34:03.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278597: ['FBtr0415462'] 2021-10-25 09:34:03.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0278597 has a single transcript. 2021-10-25 09:34:03.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31402582, 31402654), (31403875, 31403935), (31404355, 31404411), (31404583, 31404652), (31404604, 31404652), (31404604, 31405270)] 2021-10-25 09:34:03.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053710: ['FBtr0091698'] 2021-10-25 09:34:03.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053710 has a single transcript. 2021-10-25 09:34:03.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032884: ['FBtr0081414'] 2021-10-25 09:34:03.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032884 has a single transcript. 2021-10-25 09:34:03.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278598: ['FBtr0415455', 'FBtr0415456', 'FBtr0415457', 'FBtr0415458', 'FBtr0415459', 'FBtr0415460'] 2021-10-25 09:34:03.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028410: ['FBtr0080432'] 2021-10-25 09:34:03.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028410 has a single transcript. 2021-10-25 09:34:03.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053721: ['FBtr0091718'] 2021-10-25 09:34:03.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053721 has a single transcript. 2021-10-25 09:34:03.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032886: ['FBtr0081415', 'FBtr0081416'] 2021-10-25 09:34:03.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028411: ['FBtr0072241', 'FBtr0343270'] 2021-10-25 09:34:03.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053723: ['FBtr0091721'] 2021-10-25 09:34:03.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053723 has a single transcript. 2021-10-25 09:34:03.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036454: ['FBtr0075695', 'FBtr0110825'] 2021-10-25 09:34:03.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053725: ['FBtr0091723', 'FBtr0346651'] 2021-10-25 09:34:03.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20798514, 20813155), (20810373, 20813155), (20813357, 20813432)] 2021-10-25 09:34:03.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23811724, 23811794), (23811737, 23811794), (23811881, 23811938)] 2021-10-25 09:34:03.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261555: ['FBtr0302709', 'FBtr0302710', 'FBtr0302711'] 2021-10-25 09:34:03.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.353 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12482656, 12485813), (12485755, 12485813), (12486131, 12486194)] 2021-10-25 09:34:03.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14805490, 14805562), (14805629, 14839217), (14839307, 14864836), (14864930, 14865002), (14865173, 14865241), (14865379, 14865716), (14866839, 14867393), (14867607, 14867920), (14868194, 14869396), (14869717, 14870543), (14870860, 14877326), (14877480, 14877562), (14877680, 14878083), (14878276, 14878333), (14878580, 14878882), (14879561, 14880205), (14880516, 14880593), (14880838, 14881344)] 2021-10-25 09:34:03.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.376 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002933: ['FBtr0070523'] 2021-10-25 09:34:03.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002933 has a single transcript. 2021-10-25 09:34:03.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002936: ['FBtr0078023'] 2021-10-25 09:34:03.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002936 has a single transcript. 2021-10-25 09:34:03.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032888: ['FBtr0081452'] 2021-10-25 09:34:03.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032888 has a single transcript. 2021-10-25 09:34:03.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002937: ['FBtr0082820'] 2021-10-25 09:34:03.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002937 has a single transcript. 2021-10-25 09:34:03.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028412: ['FBtr0080271', 'FBtr0080272', 'FBtr0305324'] 2021-10-25 09:34:03.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22538287, 22539952), (22538355, 22539952), (22538568, 22538626), (22538568, 22539952), (22538993, 22539952), (22540324, 22540377), (22540324, 22547539), (22547486, 22547539)] 2021-10-25 09:34:03.408 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22538626, 22540324, 'FBtr0415458_exon_2') contains intron (22538993, 22539952) 2021-10-25 09:34:03.408 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22538289, 22538993, 'FBtr0415460_exon_1') contains intron (22538568, 22538626) 2021-10-25 09:34:03.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0415458_exon_2', 'FBtr0415460_exon_1'] 2021-10-25 09:34:03.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053727: ['FBtr0091725'] 2021-10-25 09:34:03.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002938: ['FBtr0079436', 'FBtr0079437', 'FBtr0334835', 'FBtr0334836'] 2021-10-25 09:34:03.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053727 has a single transcript. 2021-10-25 09:34:03.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036459: ['FBtr0309063'] 2021-10-25 09:34:03.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036459 has a single transcript. 2021-10-25 09:34:03.412 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9547477, 9552901), (9553536, 9575650), (9575722, 9581390), (9581486, 9581545), (9581713, 9588239), (9583642, 9586626), (9588046, 9588239), (9588444, 9591240), (9591347, 9592085), (9592256, 9592333), (9592456, 9592726), (9592456, 9594966)] 2021-10-25 09:34:03.413 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039848: ['FBtr0085810'] 2021-10-25 09:34:03.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039848 has a single transcript. 2021-10-25 09:34:03.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032889: ['FBtr0081419', 'FBtr0081420', 'FBtr0081417', 'FBtr0081418', 'FBtr0345687', 'FBtr0302942', 'FBtr0302943', 'FBtr0302944', 'FBtr0302945', 'FBtr0339559', 'FBtr0339560', 'FBtr0339561'] 2021-10-25 09:34:03.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036460: ['FBtr0075624', 'FBtr0309064'] 2021-10-25 09:34:03.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053728: ['FBtr0091726'] 2021-10-25 09:34:03.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053728 has a single transcript. 2021-10-25 09:34:03.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039849: ['FBtr0085808', 'FBtr0085809', 'FBtr0334556'] 2021-10-25 09:34:03.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053729: ['FBtr0091727'] 2021-10-25 09:34:03.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053729 has a single transcript. 2021-10-25 09:34:03.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053730: ['FBtr0091728'] 2021-10-25 09:34:03.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053730 has a single transcript. 2021-10-25 09:34:03.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053731: ['FBtr0091729'] 2021-10-25 09:34:03.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053731 has a single transcript. 2021-10-25 09:34:03.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053732: ['FBtr0091730'] 2021-10-25 09:34:03.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053732 has a single transcript. 2021-10-25 09:34:03.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14983790, 14983912), (14983850, 14983912), (14984120, 14984210)] 2021-10-25 09:34:03.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.468 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11586270, 11586351), (11586614, 11586687), (11586628, 11586687)] 2021-10-25 09:34:03.468 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11585432, 11586628, 'FBtr0080271_exon_2') contains intron (11586270, 11586351) 2021-10-25 09:34:03.469 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11585432, 11586614, 'FBtr0080272_exon_2') contains intron (11586270, 11586351) 2021-10-25 09:34:03.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080271_exon_2', 'FBtr0080272_exon_2'] 2021-10-25 09:34:03.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053733: ['FBtr0091731'] 2021-10-25 09:34:03.469 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053733 has a single transcript. 2021-10-25 09:34:03.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053734: ['FBtr0091732'] 2021-10-25 09:34:03.477 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053734 has a single transcript. 2021-10-25 09:34:03.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053735: ['FBtr0091733'] 2021-10-25 09:34:03.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053735 has a single transcript. 2021-10-25 09:34:03.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053736: ['FBtr0091734'] 2021-10-25 09:34:03.493 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053736 has a single transcript. 2021-10-25 09:34:03.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053737: ['FBtr0091735'] 2021-10-25 09:34:03.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053737 has a single transcript. 2021-10-25 09:34:03.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7377865, 7378384), (7378688, 7378783), (7379647, 7379705), (7380643, 7380711), (7381004, 7381063), (7381335, 7381402), (7381689, 7381755), (7381905, 7381960), (7382058, 7382121), (7382175, 7382757), (7382661, 7382757), (7382945, 7383010), (7383426, 7383478), (7383755, 7383806)] 2021-10-25 09:34:03.505 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7382121, 7382776, 'FBtr0079437_exon_10') contains intron (7382175, 7382757) 2021-10-25 09:34:03.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31460341, 31460399), (31460563, 31460629), (31460862, 31460920), (31461156, 31461813), (31461968, 31462395), (31461968, 31462829), (31461968, 31462034)] 2021-10-25 09:34:03.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079437_exon_10'] 2021-10-25 09:34:03.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036461: ['FBtr0113171', 'FBtr0347146'] 2021-10-25 09:34:03.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261556: ['FBtr0302714', 'FBtr0302715', 'FBtr0302716', 'FBtr0302712', 'FBtr0302713', 'FBtr0332698', 'FBtr0332699'] 2021-10-25 09:34:03.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028415: ['FBtr0075116'] 2021-10-25 09:34:03.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028415 has a single transcript. 2021-10-25 09:34:03.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14992615, 14994582), (14994865, 14996145), (14996442, 14996499)] 2021-10-25 09:34:03.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028416: ['FBtr0075115'] 2021-10-25 09:34:03.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028416 has a single transcript. 2021-10-25 09:34:03.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028418: ['FBtr0075722'] 2021-10-25 09:34:03.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028418 has a single transcript. 2021-10-25 09:34:03.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028421: ['FBtr0289954', 'FBtr0289955', 'FBtr0289956', 'FBtr0343145', 'FBtr0343146'] 2021-10-25 09:34:03.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039850: ['FBtr0085789'] 2021-10-25 09:34:03.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039850 has a single transcript. 2021-10-25 09:34:03.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036462: ['FBtr0075672'] 2021-10-25 09:34:03.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036462 has a single transcript. 2021-10-25 09:34:03.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039851: ['FBtr0085790', 'FBtr0346230'] 2021-10-25 09:34:03.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036463: ['FBtr0075671', 'FBtr0333876'] 2021-10-25 09:34:03.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053738: ['FBtr0091736'] 2021-10-25 09:34:03.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053738 has a single transcript. 2021-10-25 09:34:03.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278599: ['FBtr0415461'] 2021-10-25 09:34:03.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0278599 has a single transcript. 2021-10-25 09:34:03.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002939: ['FBtr0081031', 'FBtr0302454'] 2021-10-25 09:34:03.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053739: ['FBtr0091737'] 2021-10-25 09:34:03.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053739 has a single transcript. 2021-10-25 09:34:03.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278600: ['FBtr0415454'] 2021-10-25 09:34:03.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0278600 has a single transcript. 2021-10-25 09:34:03.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053740: ['FBtr0091738'] 2021-10-25 09:34:03.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053740 has a single transcript. 2021-10-25 09:34:03.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278604: ['FBtr0082086'] 2021-10-25 09:34:03.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0278604 has a single transcript. 2021-10-25 09:34:03.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20823207, 20825667), (20824115, 20825271), (20824493, 20825658), (20824493, 20825667), (20824493, 20825271), (20824493, 20825470), (20824601, 20825271), (20824630, 20825271), (20824630, 20825667), (20824724, 20825667), (20825512, 20825667), (20826087, 20826632), (20826970, 20827031), (20827157, 20827496)] 2021-10-25 09:34:03.680 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20825470, 20826087, 'FBtr0302943_exon_2') contains intron (20825512, 20825667) 2021-10-25 09:34:03.681 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20825433, 20826087, 'FBtr0339561_exon_1') contains intron (20825512, 20825667) 2021-10-25 09:34:03.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302943_exon_2', 'FBtr0339561_exon_1'] 2021-10-25 09:34:03.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053741: ['FBtr0091739'] 2021-10-25 09:34:03.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053741 has a single transcript. 2021-10-25 09:34:03.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15002624, 15002726), (15004292, 15004352), (15004494, 15004668), (15004874, 15004947), (15005062, 15007934), (15007990, 15011192), (15011764, 15013870), (15011764, 15013838)] 2021-10-25 09:34:03.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.685 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31499592, 31502206), (31502686, 31502958), (31503119, 31503486), (31503688, 31503992), (31505182, 31505771), (31505996, 31506223)] 2021-10-25 09:34:03.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.686 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053742: ['FBtr0091740'] 2021-10-25 09:34:03.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053742 has a single transcript. 2021-10-25 09:34:03.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0278608: ['FBtr0089259', 'FBtr0089260', 'FBtr0089261', 'FBtr0089262', 'FBtr0089263', 'FBtr0289960', 'FBtr0339766'] 2021-10-25 09:34:03.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053743: ['FBtr0091741'] 2021-10-25 09:34:03.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053743 has a single transcript. 2021-10-25 09:34:03.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18081793, 18081852), (18082155, 18082223), (18083035, 18083098), (18083189, 18083253)] 2021-10-25 09:34:03.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20151890, 20152200), (20151890, 20153163), (20152305, 20153163), (20153335, 20153468), (20154144, 20154203), (20154548, 20154610), (20154838, 20154900), (20155278, 20155537), (20155659, 20155732), (20155827, 20155900), (20155998, 20156679), (20155998, 20158479), (20157222, 20158479), (20158668, 20184962), (20158668, 20190657), (20158668, 20162454), (20164430, 20168475), (20169063, 20190657), (20192299, 20197481), (20197802, 20197911)] 2021-10-25 09:34:03.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.703 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20197481, 20198317, 'FBtr0302714_exon_1') contains intron (20197802, 20197911) 2021-10-25 09:34:03.703 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20197481, 20198317, 'FBtr0302716_exon_1') contains intron (20197802, 20197911) 2021-10-25 09:34:03.704 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20197481, 20198317, 'FBtr0302712_exon_1') contains intron (20197802, 20197911) 2021-10-25 09:34:03.705 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20197481, 20198317, 'FBtr0302713_exon_1') contains intron (20197802, 20197911) 2021-10-25 09:34:03.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302714_exon_1', 'FBtr0302716_exon_1', 'FBtr0302712_exon_1', 'FBtr0302713_exon_1'] 2021-10-25 09:34:03.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053744: ['FBtr0091742'] 2021-10-25 09:34:03.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053744 has a single transcript. 2021-10-25 09:34:03.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11334921, 11334995), (11334933, 11334995), (11335252, 11335333), (11336809, 11336874), (11337063, 11337126), (11337260, 11337328), (11337263, 11337328), (11337643, 11337696), (11337862, 11338671), (11338789, 11339213), (11339410, 11339737)] 2021-10-25 09:34:03.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053745: ['FBtr0091743'] 2021-10-25 09:34:03.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053745 has a single transcript. 2021-10-25 09:34:03.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053746: ['FBtr0091744'] 2021-10-25 09:34:03.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053746 has a single transcript. 2021-10-25 09:34:03.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053752: ['FBtr0091753'] 2021-10-25 09:34:03.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053752 has a single transcript. 2021-10-25 09:34:03.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053757: ['FBtr0091758'] 2021-10-25 09:34:03.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036465: ['FBtr0075669'] 2021-10-25 09:34:03.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053757 has a single transcript. 2021-10-25 09:34:03.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036465 has a single transcript. 2021-10-25 09:34:03.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039852: ['FBtr0300875', 'FBtr0300876'] 2021-10-25 09:34:03.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053758: ['FBtr0091759'] 2021-10-25 09:34:03.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036466: ['FBtr0075666'] 2021-10-25 09:34:03.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053758 has a single transcript. 2021-10-25 09:34:03.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036466 has a single transcript. 2021-10-25 09:34:03.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002940: ['FBtr0083857'] 2021-10-25 09:34:03.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002940 has a single transcript. 2021-10-25 09:34:03.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053764: ['FBtr0091765'] 2021-10-25 09:34:03.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036467: ['FBtr0075665'] 2021-10-25 09:34:03.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053764 has a single transcript. 2021-10-25 09:34:03.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036467 has a single transcript. 2021-10-25 09:34:03.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002941: ['FBtr0084123', 'FBtr0330389'] 2021-10-25 09:34:03.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053766: ['FBtr0091767'] 2021-10-25 09:34:03.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053766 has a single transcript. 2021-10-25 09:34:03.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036468: ['FBtr0075664'] 2021-10-25 09:34:03.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036468 has a single transcript. 2021-10-25 09:34:03.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31543527, 31549286), (31543577, 31549286), (31549352, 31558126), (31558508, 31559228), (31559389, 31560001), (31560203, 31560533), (31560785, 31560851), (31561795, 31561946), (31562150, 31565110)] 2021-10-25 09:34:03.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053767: ['FBtr0091768'] 2021-10-25 09:34:03.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053767 has a single transcript. 2021-10-25 09:34:03.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036469: ['FBtr0075663', 'FBtr0333874'] 2021-10-25 09:34:03.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053768: ['FBtr0091769'] 2021-10-25 09:34:03.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053768 has a single transcript. 2021-10-25 09:34:03.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21549242, 21549461), (21549739, 21554531), (21554790, 21555631)] 2021-10-25 09:34:03.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053769: ['FBtr0091770'] 2021-10-25 09:34:03.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053769 has a single transcript. 2021-10-25 09:34:03.825 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084123': ['FBtr0330389']} 2021-10-25 09:34:03.826 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330389']] 2021-10-25 09:34:03.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053770: ['FBtr0290125'] 2021-10-25 09:34:03.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053770 has a single transcript. 2021-10-25 09:34:03.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002945: ['FBtr0075039', 'FBtr0332649', 'FBtr0332650'] 2021-10-25 09:34:03.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053771: ['FBtr0303713'] 2021-10-25 09:34:03.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053771 has a single transcript. 2021-10-25 09:34:03.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053772: ['FBtr0303714'] 2021-10-25 09:34:03.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053772 has a single transcript. 2021-10-25 09:34:03.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:03.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.860 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16333643, 16334300), (16333718, 16334300), (16333763, 16334300), (16334239, 16334300), (16334413, 16336266), (16334413, 16336287), (16334413, 16336290), (16336743, 16336850), (16337009, 16337085), (16337249, 16337380), (16337555, 16337624)] 2021-10-25 09:34:03.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039854: ['FBtr0085796'] 2021-10-25 09:34:03.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039854 has a single transcript. 2021-10-25 09:34:03.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053773: ['FBtr0091774'] 2021-10-25 09:34:03.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053773 has a single transcript. 2021-10-25 09:34:03.862 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16333611, 16334413, 'FBtr0089262_exon_1') contains intron (16333643, 16334300) 2021-10-25 09:34:03.862 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089262_exon_1'] 2021-10-25 09:34:03.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039855: ['FBtr0113315'] 2021-10-25 09:34:03.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039855 has a single transcript. 2021-10-25 09:34:03.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053774: ['FBtr0091775'] 2021-10-25 09:34:03.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053774 has a single transcript. 2021-10-25 09:34:03.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053775: ['FBtr0091776'] 2021-10-25 09:34:03.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053775 has a single transcript. 2021-10-25 09:34:03.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039856: ['FBtr0085798', 'FBtr0344003'] 2021-10-25 09:34:03.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053777: ['FBtr0091778'] 2021-10-25 09:34:03.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053777 has a single transcript. 2021-10-25 09:34:03.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053783: ['FBtr0091784'] 2021-10-25 09:34:03.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053783 has a single transcript. 2021-10-25 09:34:03.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19005991, 19007430), (19005991, 19006545), (19005991, 19007441), (19006922, 19007441), (19008254, 19010594), (19011058, 19044303)] 2021-10-25 09:34:03.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053784: ['FBtr0091785'] 2021-10-25 09:34:03.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053784 has a single transcript. 2021-10-25 09:34:03.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028422: ['FBtr0083938'] 2021-10-25 09:34:03.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028422 has a single transcript. 2021-10-25 09:34:03.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036470: ['FBtr0075631'] 2021-10-25 09:34:03.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036470 has a single transcript. 2021-10-25 09:34:03.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053792: ['FBtr0332251'] 2021-10-25 09:34:03.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053792 has a single transcript. 2021-10-25 09:34:03.925 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31593309, 31593366)] 2021-10-25 09:34:03.926 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028424: ['FBtr0087139'] 2021-10-25 09:34:03.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028424 has a single transcript. 2021-10-25 09:34:03.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036471: ['FBtr0114510'] 2021-10-25 09:34:03.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036471 has a single transcript. 2021-10-25 09:34:03.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053795: ['FBtr0346810'] 2021-10-25 09:34:03.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053795 has a single transcript. 2021-10-25 09:34:03.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036474: ['FBtr0075659', 'FBtr0310278'] 2021-10-25 09:34:03.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028425: ['FBtr0089655', 'FBtr0089656', 'FBtr0342608', 'FBtr0346427', 'FBtr0305089'] 2021-10-25 09:34:03.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053796: ['FBtr0091800'] 2021-10-25 09:34:03.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053796 has a single transcript. 2021-10-25 09:34:03.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053797: ['FBtr0334484'] 2021-10-25 09:34:03.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053797 has a single transcript. 2021-10-25 09:34:03.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053798: ['FBtr0091802'] 2021-10-25 09:34:03.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053798 has a single transcript. 2021-10-25 09:34:03.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053801: ['FBtr0091805'] 2021-10-25 09:34:03.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053801 has a single transcript. 2021-10-25 09:34:03.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039857: ['FBtr0085804', 'FBtr0085805'] 2021-10-25 09:34:03.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15077256, 15077306), (15077573, 15077631), (15077573, 15077676)] 2021-10-25 09:34:03.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:03.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:03.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053802: ['FBtr0091806'] 2021-10-25 09:34:03.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053802 has a single transcript. 2021-10-25 09:34:03.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053803: ['FBtr0091807'] 2021-10-25 09:34:03.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053803 has a single transcript. 2021-10-25 09:34:04.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053804: ['FBtr0091808'] 2021-10-25 09:34:04.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053804 has a single transcript. 2021-10-25 09:34:04.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261560: ['FBtr0077524', 'FBtr0345289'] 2021-10-25 09:34:04.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053805: ['FBtr0091809'] 2021-10-25 09:34:04.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053805 has a single transcript. 2021-10-25 09:34:04.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053806: ['FBtr0091810'] 2021-10-25 09:34:04.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053806 has a single transcript. 2021-10-25 09:34:04.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002948: ['FBtr0073516', 'FBtr0340297'] 2021-10-25 09:34:04.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053807: ['FBtr0091811'] 2021-10-25 09:34:04.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053807 has a single transcript. 2021-10-25 09:34:04.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053808: ['FBtr0091812'] 2021-10-25 09:34:04.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053808 has a single transcript. 2021-10-25 09:34:04.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31595463, 31595520), (31595601, 31596047)] 2021-10-25 09:34:04.042 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31594791, 31595601, 'FBtr0085805_exon_2') contains intron (31595463, 31595520) 2021-10-25 09:34:04.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085805_exon_2'] 2021-10-25 09:34:04.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053809: ['FBtr0091813'] 2021-10-25 09:34:04.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036476: ['FBtr0075657'] 2021-10-25 09:34:04.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036476 has a single transcript. 2021-10-25 09:34:04.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053809 has a single transcript. 2021-10-25 09:34:04.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036479: ['FBtr0075637'] 2021-10-25 09:34:04.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036479 has a single transcript. 2021-10-25 09:34:04.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053810: ['FBtr0091814'] 2021-10-25 09:34:04.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053810 has a single transcript. 2021-10-25 09:34:04.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12052503, 12052559), (12052684, 12052763), (12053088, 12053656), (12053924, 12053981), (12054084, 12054302), (12054498, 12055084), (12055359, 12055479), (12055359, 12055901), (12055359, 12055714)] 2021-10-25 09:34:04.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3478760, 3479184)] 2021-10-25 09:34:04.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036480: ['FBtr0075638', 'FBtr0303375', 'FBtr0333853'] 2021-10-25 09:34:04.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053811: ['FBtr0091815'] 2021-10-25 09:34:04.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053811 has a single transcript. 2021-10-25 09:34:04.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053812: ['FBtr0091816'] 2021-10-25 09:34:04.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053812 has a single transcript. 2021-10-25 09:34:04.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11581040, 11581104), (11581299, 11581369), (11581904, 11582038), (11582184, 11584305), (11584496, 11584559), (11585270, 11585348)] 2021-10-25 09:34:04.082 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053813: ['FBtr0091817'] 2021-10-25 09:34:04.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053813 has a single transcript. 2021-10-25 09:34:04.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039858: ['FBtr0085799', 'FBtr0085800', 'FBtr0085802', 'FBtr0085803', 'FBtr0333328'] 2021-10-25 09:34:04.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053814: ['FBtr0091818'] 2021-10-25 09:34:04.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053814 has a single transcript. 2021-10-25 09:34:04.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053815: ['FBtr0091819'] 2021-10-25 09:34:04.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053815 has a single transcript. 2021-10-25 09:34:04.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053816: ['FBtr0091820'] 2021-10-25 09:34:04.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053816 has a single transcript. 2021-10-25 09:34:04.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053817: ['FBtr0091821'] 2021-10-25 09:34:04.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053817 has a single transcript. 2021-10-25 09:34:04.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053818: ['FBtr0091822'] 2021-10-25 09:34:04.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053818 has a single transcript. 2021-10-25 09:34:04.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261561: ['FBtr0302724', 'FBtr0302725', 'FBtr0302726', 'FBtr0302727', 'FBtr0303165', 'FBtr0335519'] 2021-10-25 09:34:04.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053819: ['FBtr0091823'] 2021-10-25 09:34:04.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053819 has a single transcript. 2021-10-25 09:34:04.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15116959, 15117020), (15117095, 15117473), (15117600, 15117660), (15117813, 15117910), (15119306, 15119374), (15119585, 15119647), (15119763, 15126215), (15126341, 15126493), (15126647, 15126720), (15126647, 15126702), (15126827, 15127016), (15127284, 15127465), (15127409, 15127465), (15127651, 15127744)] 2021-10-25 09:34:04.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002962: ['FBtr0083732', 'FBtr0335019'] 2021-10-25 09:34:04.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053820: ['FBtr0091824'] 2021-10-25 09:34:04.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053820 has a single transcript. 2021-10-25 09:34:04.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283426: ['FBtr0445179'] 2021-10-25 09:34:04.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283426 has a single transcript. 2021-10-25 09:34:04.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053821: ['FBtr0091825'] 2021-10-25 09:34:04.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053821 has a single transcript. 2021-10-25 09:34:04.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283427: ['FBtr0077659', 'FBtr0335387'] 2021-10-25 09:34:04.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053822: ['FBtr0091826'] 2021-10-25 09:34:04.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053822 has a single transcript. 2021-10-25 09:34:04.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032891: ['FBtr0290042'] 2021-10-25 09:34:04.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032891 has a single transcript. 2021-10-25 09:34:04.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053823: ['FBtr0091827'] 2021-10-25 09:34:04.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053823 has a single transcript. 2021-10-25 09:34:04.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032894: ['FBtr0081425', 'FBtr0339565'] 2021-10-25 09:34:04.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19157539, 19157596), (19157972, 19158515), (19158985, 19159058)] 2021-10-25 09:34:04.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19157237, 19157972, 'FBtr0083732_exon_1') contains intron (19157539, 19157596) 2021-10-25 09:34:04.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083732_exon_1'] 2021-10-25 09:34:04.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053824: ['FBtr0091828'] 2021-10-25 09:34:04.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053824 has a single transcript. 2021-10-25 09:34:04.208 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31599348, 31600388), (31600603, 31600673), (31601048, 31601111), (31601351, 31601415), (31602230, 31610880), (31602230, 31612310), (31602230, 31609319), (31603073, 31610880)] 2021-10-25 09:34:04.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053825: ['FBtr0091829'] 2021-10-25 09:34:04.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053825 has a single transcript. 2021-10-25 09:34:04.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3056924, 3059604), (3057110, 3059604), (3060142, 3060229), (3066957, 3067019), (3067115, 3067183), (3067327, 3067388)] 2021-10-25 09:34:04.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053826: ['FBtr0091830'] 2021-10-25 09:34:04.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053826 has a single transcript. 2021-10-25 09:34:04.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053827: ['FBtr0091831'] 2021-10-25 09:34:04.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053827 has a single transcript. 2021-10-25 09:34:04.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053828: ['FBtr0091832'] 2021-10-25 09:34:04.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053828 has a single transcript. 2021-10-25 09:34:04.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:04.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053829: ['FBtr0091833'] 2021-10-25 09:34:04.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053829 has a single transcript. 2021-10-25 09:34:04.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053830: ['FBtr0091834'] 2021-10-25 09:34:04.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053830 has a single transcript. 2021-10-25 09:34:04.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036481: ['FBtr0075655', 'FBtr0075656', 'FBtr0303378', 'FBtr0333935', 'FBtr0344235'] 2021-10-25 09:34:04.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028426: ['FBtr0088360'] 2021-10-25 09:34:04.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028426 has a single transcript. 2021-10-25 09:34:04.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002973: ['FBtr0079822', 'FBtr0079821', 'FBtr0339526'] 2021-10-25 09:34:04.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053831: ['FBtr0091835'] 2021-10-25 09:34:04.262 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053831 has a single transcript. 2021-10-25 09:34:04.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028427: ['FBtr0078305', 'FBtr0307160'] 2021-10-25 09:34:04.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053832: ['FBtr0091836'] 2021-10-25 09:34:04.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053832 has a single transcript. 2021-10-25 09:34:04.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283428: ['FBtr0445172'] 2021-10-25 09:34:04.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283428 has a single transcript. 2021-10-25 09:34:04.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053833: ['FBtr0091837'] 2021-10-25 09:34:04.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053833 has a single transcript. 2021-10-25 09:34:04.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283429: ['FBtr0445177'] 2021-10-25 09:34:04.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283429 has a single transcript. 2021-10-25 09:34:04.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5813937, 5814938), (5814849, 5814938), (5815283, 5817515), (5816899, 5817515), (5817279, 5817515), (5818067, 5818151), (5818187, 5818248)] 2021-10-25 09:34:04.285 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5814678, 5815283, 'FBtr0302725_exon_1') contains intron (5814849, 5814938) 2021-10-25 09:34:04.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302725_exon_1'] 2021-10-25 09:34:04.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053834: ['FBtr0091838'] 2021-10-25 09:34:04.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053834 has a single transcript. 2021-10-25 09:34:04.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283430: ['FBtr0445175'] 2021-10-25 09:34:04.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283430 has a single transcript. 2021-10-25 09:34:04.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283431: ['FBtr0445173'] 2021-10-25 09:34:04.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283431 has a single transcript. 2021-10-25 09:34:04.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053835: ['FBtr0091839'] 2021-10-25 09:34:04.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053835 has a single transcript. 2021-10-25 09:34:04.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032895: ['FBtr0081426'] 2021-10-25 09:34:04.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032895 has a single transcript. 2021-10-25 09:34:04.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283432: ['FBtr0445178'] 2021-10-25 09:34:04.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283432 has a single transcript. 2021-10-25 09:34:04.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053836: ['FBtr0091840'] 2021-10-25 09:34:04.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053836 has a single transcript. 2021-10-25 09:34:04.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032896: ['FBtr0081449'] 2021-10-25 09:34:04.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032896 has a single transcript. 2021-10-25 09:34:04.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21217152, 21217566), (21217732, 21217790), (21218336, 21218398)] 2021-10-25 09:34:04.315 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21216900, 21217571, 'FBtr0307160_exon_1') contains intron (21217152, 21217566) 2021-10-25 09:34:04.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307160_exon_1'] 2021-10-25 09:34:04.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283433: ['FBtr0445176'] 2021-10-25 09:34:04.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283433 has a single transcript. 2021-10-25 09:34:04.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053837: ['FBtr0091841'] 2021-10-25 09:34:04.324 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053837 has a single transcript. 2021-10-25 09:34:04.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032897: ['FBtr0081427', 'FBtr0307498'] 2021-10-25 09:34:04.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9437959, 9447017), (9447047, 9460504), (9450381, 9460046), (9450381, 9450595), (9450620, 9460046), (9460368, 9460504), (9460753, 9460937)] 2021-10-25 09:34:04.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283434: ['FBtr0445174'] 2021-10-25 09:34:04.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283434 has a single transcript. 2021-10-25 09:34:04.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283435: ['FBtr0445180'] 2021-10-25 09:34:04.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283435 has a single transcript. 2021-10-25 09:34:04.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053838: ['FBtr0091842'] 2021-10-25 09:34:04.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053838 has a single transcript. 2021-10-25 09:34:04.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283437: ['FBtr0302291'] 2021-10-25 09:34:04.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283437 has a single transcript. 2021-10-25 09:34:04.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053839: ['FBtr0091843'] 2021-10-25 09:34:04.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053839 has a single transcript. 2021-10-25 09:34:04.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283438: ['FBtr0445182', 'FBtr0445183'] 2021-10-25 09:34:04.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053840: ['FBtr0091844'] 2021-10-25 09:34:04.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053840 has a single transcript. 2021-10-25 09:34:04.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053841: ['FBtr0091845'] 2021-10-25 09:34:04.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15120030, 15120279), (15120949, 15121063), (15121407, 15122623), (15123061, 15124124), (15123061, 15125083), (15124324, 15125083), (15124324, 15125260)] 2021-10-25 09:34:04.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053841 has a single transcript. 2021-10-25 09:34:04.368 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15119877, 15120949, 'FBtr0075655_exon_5') contains intron (15120030, 15120279) 2021-10-25 09:34:04.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15119877, 15120949, 'FBtr0075656_exon_4') contains intron (15120030, 15120279) 2021-10-25 09:34:04.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075655_exon_5', 'FBtr0075656_exon_4'] 2021-10-25 09:34:04.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20858820, 20859724), (20859333, 20859724), (20859901, 20860681)] 2021-10-25 09:34:04.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.374 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028429: ['FBtr0076370', 'FBtr0112935'] 2021-10-25 09:34:04.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053842: ['FBtr0091846'] 2021-10-25 09:34:04.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053842 has a single transcript. 2021-10-25 09:34:04.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053843: ['FBtr0091847'] 2021-10-25 09:34:04.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053843 has a single transcript. 2021-10-25 09:34:04.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13027966, 13028026), (13028146, 13028204), (13028884, 13029918), (13030154, 13030221), (13030154, 13030413)] 2021-10-25 09:34:04.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053844: ['FBtr0091848'] 2021-10-25 09:34:04.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053844 has a single transcript. 2021-10-25 09:34:04.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039859: ['FBtr0085868', 'FBtr0337033'] 2021-10-25 09:34:04.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053845: ['FBtr0091849'] 2021-10-25 09:34:04.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053845 has a single transcript. 2021-10-25 09:34:04.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053846: ['FBtr0091850'] 2021-10-25 09:34:04.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053846 has a single transcript. 2021-10-25 09:34:04.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9835282, 9835338), (9835433, 9835812), (9835980, 9836048), (9836146, 9836208), (9836146, 9836521)] 2021-10-25 09:34:04.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032898: ['FBtr0081448'] 2021-10-25 09:34:04.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032898 has a single transcript. 2021-10-25 09:34:04.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053847: ['FBtr0091851'] 2021-10-25 09:34:04.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053847 has a single transcript. 2021-10-25 09:34:04.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002985: ['FBtr0077557'] 2021-10-25 09:34:04.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002985 has a single transcript. 2021-10-25 09:34:04.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053848: ['FBtr0091852'] 2021-10-25 09:34:04.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053848 has a single transcript. 2021-10-25 09:34:04.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032899: ['FBtr0081428', 'FBtr0333009'] 2021-10-25 09:34:04.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0002989: ['FBtr0077673'] 2021-10-25 09:34:04.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0002989 has a single transcript. 2021-10-25 09:34:04.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053849: ['FBtr0091853'] 2021-10-25 09:34:04.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053849 has a single transcript. 2021-10-25 09:34:04.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31616004, 31616071)] 2021-10-25 09:34:04.449 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003002: ['FBtr0078836'] 2021-10-25 09:34:04.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003002 has a single transcript. 2021-10-25 09:34:04.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053850: ['FBtr0091854'] 2021-10-25 09:34:04.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053850 has a single transcript. 2021-10-25 09:34:04.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283439: ['FBtr0445184'] 2021-10-25 09:34:04.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283439 has a single transcript. 2021-10-25 09:34:04.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003008: ['FBtr0072152'] 2021-10-25 09:34:04.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003008 has a single transcript. 2021-10-25 09:34:04.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283440: ['FBtr0445188', 'FBtr0445189'] 2021-10-25 09:34:04.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053851: ['FBtr0091855'] 2021-10-25 09:34:04.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053851 has a single transcript. 2021-10-25 09:34:04.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003009: ['FBtr0072047', 'FBtr0343199'] 2021-10-25 09:34:04.477 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20865353, 20865411), (20865585, 20866935)] 2021-10-25 09:34:04.478 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.478 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053852: ['FBtr0091856'] 2021-10-25 09:34:04.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053852 has a single transcript. 2021-10-25 09:34:04.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028430: ['FBtr0080616', 'FBtr0343645'] 2021-10-25 09:34:04.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053853: ['FBtr0091857'] 2021-10-25 09:34:04.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053853 has a single transcript. 2021-10-25 09:34:04.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053854: ['FBtr0091858'] 2021-10-25 09:34:04.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053854 has a single transcript. 2021-10-25 09:34:04.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15061736, 15068381), (15061782, 15068381), (15068429, 15068482), (15068870, 15069033), (15070096, 15070422)] 2021-10-25 09:34:04.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053855: ['FBtr0091859'] 2021-10-25 09:34:04.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053855 has a single transcript. 2021-10-25 09:34:04.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039860: ['FBtr0085819'] 2021-10-25 09:34:04.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039860 has a single transcript. 2021-10-25 09:34:04.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053856: ['FBtr0091860'] 2021-10-25 09:34:04.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053856 has a single transcript. 2021-10-25 09:34:04.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261562: ['FBtr0302729', 'FBtr0302730', 'FBtr0332874', 'FBtr0345814'] 2021-10-25 09:34:04.521 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23271949, 23272013), (23272288, 23272341), (23272419, 23272486), (23272666, 23272726), (23272976, 23273039), (23273665, 23273723)] 2021-10-25 09:34:04.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039861: ['FBtr0085820', 'FBtr0337031', 'FBtr0337032'] 2021-10-25 09:34:04.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053857: ['FBtr0091861'] 2021-10-25 09:34:04.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053857 has a single transcript. 2021-10-25 09:34:04.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032900: ['FBtr0081430', 'FBtr0307163', 'FBtr0333010'] 2021-10-25 09:34:04.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053858: ['FBtr0091862'] 2021-10-25 09:34:04.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053858 has a single transcript. 2021-10-25 09:34:04.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13972611, 13972790)] 2021-10-25 09:34:04.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053859: ['FBtr0091863'] 2021-10-25 09:34:04.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053859 has a single transcript. 2021-10-25 09:34:04.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053860: ['FBtr0091864'] 2021-10-25 09:34:04.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053860 has a single transcript. 2021-10-25 09:34:04.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283442: ['FBtr0445185', 'FBtr0445186', 'FBtr0445187'] 2021-10-25 09:34:04.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036482: ['FBtr0075653', 'FBtr0075654'] 2021-10-25 09:34:04.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053861: ['FBtr0091865'] 2021-10-25 09:34:04.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053861 has a single transcript. 2021-10-25 09:34:04.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003011: ['FBtr0083784'] 2021-10-25 09:34:04.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003011 has a single transcript. 2021-10-25 09:34:04.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053862: ['FBtr0091866'] 2021-10-25 09:34:04.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053862 has a single transcript. 2021-10-25 09:34:04.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028434: ['FBtr0087448'] 2021-10-25 09:34:04.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028434 has a single transcript. 2021-10-25 09:34:04.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20870191, 20870601), (20870347, 20870601), (20870760, 20870831), (20870772, 20870831)] 2021-10-25 09:34:04.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.589 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.589 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31618769, 31619240), (31619057, 31619240), (31619444, 31619509), (31620459, 31620515), (31620770, 31620829), (31621359, 31621919)] 2021-10-25 09:34:04.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.590 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003015: ['FBtr0081956', 'FBtr0081954', 'FBtr0392898'] 2021-10-25 09:34:04.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028436: ['FBtr0078647'] 2021-10-25 09:34:04.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028436 has a single transcript. 2021-10-25 09:34:04.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053863: ['FBtr0091867'] 2021-10-25 09:34:04.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053863 has a single transcript. 2021-10-25 09:34:04.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028467: ['FBtr0079297'] 2021-10-25 09:34:04.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028467 has a single transcript. 2021-10-25 09:34:04.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15128250, 15128355), (15131210, 15131267), (15131217, 15131267)] 2021-10-25 09:34:04.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053864: ['FBtr0091868'] 2021-10-25 09:34:04.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053864 has a single transcript. 2021-10-25 09:34:04.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1803327, 1803432), (1803567, 1803794), (1803567, 1805009), (1803733, 1803794), (1804355, 1804416), (1805458, 1805530), (1805708, 1806235)] 2021-10-25 09:34:04.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028468: ['FBtr0084009'] 2021-10-25 09:34:04.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028468 has a single transcript. 2021-10-25 09:34:04.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028471: ['FBtr0084633'] 2021-10-25 09:34:04.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028471 has a single transcript. 2021-10-25 09:34:04.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053865: ['FBtr0091869'] 2021-10-25 09:34:04.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028473: ['FBtr0088554', 'FBtr0300649'] 2021-10-25 09:34:04.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053865 has a single transcript. 2021-10-25 09:34:04.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053866: ['FBtr0091870'] 2021-10-25 09:34:04.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053866 has a single transcript. 2021-10-25 09:34:04.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15061736, 15068381), (15061782, 15068381), (15068429, 15068482), (15068870, 15072337), (15072627, 15072686), (15073430, 15073488), (15073702, 15073766), (15074038, 15074109)] 2021-10-25 09:34:04.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053867: ['FBtr0091871'] 2021-10-25 09:34:04.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053867 has a single transcript. 2021-10-25 09:34:04.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053868: ['FBtr0091872'] 2021-10-25 09:34:04.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053868 has a single transcript. 2021-10-25 09:34:04.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9398114, 9398183), (9398458, 9398583)] 2021-10-25 09:34:04.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036483: ['FBtr0075652', 'FBtr0075651'] 2021-10-25 09:34:04.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8935680, 8935928), (8935799, 8935928), (8936346, 8936441), (8936361, 8936441), (8937078, 8937141), (8937206, 8937264)] 2021-10-25 09:34:04.672 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8936441, 8937206, 'FBtr0081956_exon_3') contains intron (8937078, 8937141) 2021-10-25 09:34:04.673 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8936441, 8937206, 'FBtr0081954_exon_3') contains intron (8937078, 8937141) 2021-10-25 09:34:04.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081956_exon_3', 'FBtr0081954_exon_3'] 2021-10-25 09:34:04.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053869: ['FBtr0091873'] 2021-10-25 09:34:04.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053869 has a single transcript. 2021-10-25 09:34:04.682 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081956': ['FBtr0081954']} 2021-10-25 09:34:04.682 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0081954']] 2021-10-25 09:34:04.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039862: ['FBtr0085821', 'FBtr0330107'] 2021-10-25 09:34:04.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053870: ['FBtr0091874'] 2021-10-25 09:34:04.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053870 has a single transcript. 2021-10-25 09:34:04.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053871: ['FBtr0091875'] 2021-10-25 09:34:04.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053871 has a single transcript. 2021-10-25 09:34:04.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053872: ['FBtr0091876'] 2021-10-25 09:34:04.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053872 has a single transcript. 2021-10-25 09:34:04.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032901: ['FBtr0081442', 'FBtr0081443', 'FBtr0081444', 'FBtr0081445', 'FBtr0081446', 'FBtr0081447', 'FBtr0081440', 'FBtr0081441', 'FBtr0330255', 'FBtr0330256', 'FBtr0330257', 'FBtr0301961'] 2021-10-25 09:34:04.713 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15133594, 15133661), (15134472, 15134889), (15135220, 15135605), (15135971, 15136031), (15136304, 15136473)] 2021-10-25 09:34:04.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053873: ['FBtr0091877'] 2021-10-25 09:34:04.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053873 has a single transcript. 2021-10-25 09:34:04.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028474: ['FBtr0070799', 'FBtr0340463'] 2021-10-25 09:34:04.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31622822, 31633570), (31633612, 31658578), (31658969, 31659150)] 2021-10-25 09:34:04.727 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053874: ['FBtr0091878'] 2021-10-25 09:34:04.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053874 has a single transcript. 2021-10-25 09:34:04.736 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085821': ['FBtr0330107']} 2021-10-25 09:34:04.736 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330107']] 2021-10-25 09:34:04.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003016: ['FBtr0114465', 'FBtr0301494', 'FBtr0301495', 'FBtr0301496'] 2021-10-25 09:34:04.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053875: ['FBtr0091879'] 2021-10-25 09:34:04.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053875 has a single transcript. 2021-10-25 09:34:04.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039863: ['FBtr0085823', 'FBtr0085824'] 2021-10-25 09:34:04.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053876: ['FBtr0091880'] 2021-10-25 09:34:04.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053876 has a single transcript. 2021-10-25 09:34:04.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283450: ['FBtr0089013'] 2021-10-25 09:34:04.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283450 has a single transcript. 2021-10-25 09:34:04.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261563: ['FBtr0302731', 'FBtr0302732', 'FBtr0302733', 'FBtr0302734', 'FBtr0302735', 'FBtr0305063'] 2021-10-25 09:34:04.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053877: ['FBtr0091881'] 2021-10-25 09:34:04.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053877 has a single transcript. 2021-10-25 09:34:04.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5666313, 5666376), (5666468, 5666556), (5666798, 5667209), (5668332, 5668397), (5669226, 5669301), (5669945, 5670050)] 2021-10-25 09:34:04.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5666051, 5666468, 'FBtr0340463_exon_1') contains intron (5666313, 5666376) 2021-10-25 09:34:04.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340463_exon_1'] 2021-10-25 09:34:04.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036484: ['FBtr0075640', 'FBtr0331830'] 2021-10-25 09:34:04.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053878: ['FBtr0091882'] 2021-10-25 09:34:04.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053878 has a single transcript. 2021-10-25 09:34:04.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053879: ['FBtr0091883'] 2021-10-25 09:34:04.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053879 has a single transcript. 2021-10-25 09:34:04.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283451: ['FBtr0070261', 'FBtr0070262', 'FBtr0070263', 'FBtr0070265', 'FBtr0070266', 'FBtr0300427', 'FBtr0300428', 'FBtr0300429', 'FBtr0303562', 'FBtr0303563', 'FBtr0303564', 'FBtr0308319', 'FBtr0330406', 'FBtr0332293'] 2021-10-25 09:34:04.795 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31669680, 31669816), (31669940, 31670763), (31669940, 31670775), (31671795, 31671913), (31672080, 31672143), (31672225, 31673456), (31673637, 31673705), (31675381, 31675457), (31676167, 31676300), (31677167, 31677234)] 2021-10-25 09:34:04.796 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31673705, 31676167, 'FBtr0085824_exon_7') contains intron (31675381, 31675457) 2021-10-25 09:34:04.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085824_exon_7'] 2021-10-25 09:34:04.796 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053880: ['FBtr0091884'] 2021-10-25 09:34:04.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053880 has a single transcript. 2021-10-25 09:34:04.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053881: ['FBtr0091885'] 2021-10-25 09:34:04.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053881 has a single transcript. 2021-10-25 09:34:04.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15144535, 15144668), (15144549, 15144668)] 2021-10-25 09:34:04.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053882: ['FBtr0091886'] 2021-10-25 09:34:04.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053882 has a single transcript. 2021-10-25 09:34:04.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053883: ['FBtr0091887'] 2021-10-25 09:34:04.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053883 has a single transcript. 2021-10-25 09:34:04.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028475: ['FBtr0084467', 'FBtr0321255'] 2021-10-25 09:34:04.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14600875, 14601131), (14600875, 14601686), (14601480, 14601686), (14601798, 14601850), (14602000, 14602112), (14602252, 14602326), (14602461, 14602590), (14605244, 14610683), (14611260, 14611850), (14611916, 14636078), (14636159, 14688465), (14636159, 14639742), (14639769, 14688465)] 2021-10-25 09:34:04.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053884: ['FBtr0091888'] 2021-10-25 09:34:04.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053884 has a single transcript. 2021-10-25 09:34:04.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053885: ['FBtr0091889'] 2021-10-25 09:34:04.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053885 has a single transcript. 2021-10-25 09:34:04.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053886: ['FBtr0091890'] 2021-10-25 09:34:04.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053886 has a single transcript. 2021-10-25 09:34:04.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039864: ['FBtr0085867'] 2021-10-25 09:34:04.859 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039864 has a single transcript. 2021-10-25 09:34:04.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036485: ['FBtr0075641', 'FBtr0331831'] 2021-10-25 09:34:04.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053887: ['FBtr0091891'] 2021-10-25 09:34:04.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053887 has a single transcript. 2021-10-25 09:34:04.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039867: ['FBtr0085865'] 2021-10-25 09:34:04.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039867 has a single transcript. 2021-10-25 09:34:04.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23755213, 23755273), (23755478, 23755538), (23755873, 23755938), (23756087, 23756156), (23756331, 23756397), (23757143, 23757196), (23758007, 23758283)] 2021-10-25 09:34:04.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053888: ['FBtr0091892'] 2021-10-25 09:34:04.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053888 has a single transcript. 2021-10-25 09:34:04.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039868: ['FBtr0085831'] 2021-10-25 09:34:04.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039868 has a single transcript. 2021-10-25 09:34:04.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053889: ['FBtr0091893'] 2021-10-25 09:34:04.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053889 has a single transcript. 2021-10-25 09:34:04.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039869: ['FBtr0085836'] 2021-10-25 09:34:04.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039869 has a single transcript. 2021-10-25 09:34:04.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053890: ['FBtr0091894'] 2021-10-25 09:34:04.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053890 has a single transcript. 2021-10-25 09:34:04.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14264123, 14278218), (14278559, 14285955), (14287847, 14288149), (14288958, 14319553), (14301676, 14308074), (14301758, 14307948), (14301758, 14308074), (14301758, 14308135), (14309177, 14319553), (14320913, 14320988), (14321244, 14321308), (14321705, 14321790), (14323478, 14323535), (14324288, 14324348), (14324631, 14324687), (14324838, 14324896), (14325554, 14325695), (14325554, 14326434), (14327053, 14327109), (14327243, 14327300), (14327529, 14327596)] 2021-10-25 09:34:04.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039870: ['FBtr0085837'] 2021-10-25 09:34:04.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039870 has a single transcript. 2021-10-25 09:34:04.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053891: ['FBtr0091895'] 2021-10-25 09:34:04.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053891 has a single transcript. 2021-10-25 09:34:04.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039872: ['FBtr0300915', 'FBtr0339190'] 2021-10-25 09:34:04.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053892: ['FBtr0091896'] 2021-10-25 09:34:04.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053892 has a single transcript. 2021-10-25 09:34:04.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15147402, 15150811), (15150710, 15150811), (15151001, 15151467), (15152184, 15152369), (15152553, 15152619)] 2021-10-25 09:34:04.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053893: ['FBtr0091897'] 2021-10-25 09:34:04.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053893 has a single transcript. 2021-10-25 09:34:04.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053894: ['FBtr0091898'] 2021-10-25 09:34:04.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053894 has a single transcript. 2021-10-25 09:34:04.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053895: ['FBtr0091899'] 2021-10-25 09:34:04.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053895 has a single transcript. 2021-10-25 09:34:04.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028476: ['FBtr0333818', 'FBtr0300832', 'FBtr0300833'] 2021-10-25 09:34:04.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053896: ['FBtr0091900'] 2021-10-25 09:34:04.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053896 has a single transcript. 2021-10-25 09:34:04.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31752331, 31752397), (31752334, 31752397), (31752930, 31752989), (31753239, 31753303), (31753523, 31753591), (31753709, 31753849), (31754009, 31754382)] 2021-10-25 09:34:04.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053897: ['FBtr0091901'] 2021-10-25 09:34:04.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053897 has a single transcript. 2021-10-25 09:34:04.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053898: ['FBtr0091902'] 2021-10-25 09:34:04.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053898 has a single transcript. 2021-10-25 09:34:04.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036486: ['FBtr0075646'] 2021-10-25 09:34:04.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036486 has a single transcript. 2021-10-25 09:34:04.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053899: ['FBtr0091903'] 2021-10-25 09:34:04.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053899 has a single transcript. 2021-10-25 09:34:04.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036487: ['FBtr0075642'] 2021-10-25 09:34:04.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036487 has a single transcript. 2021-10-25 09:34:04.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053900: ['FBtr0091904'] 2021-10-25 09:34:04.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053900 has a single transcript. 2021-10-25 09:34:04.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036488: ['FBtr0075643'] 2021-10-25 09:34:04.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036488 has a single transcript. 2021-10-25 09:34:04.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20873890, 20873956), (20874177, 20874273), (20874432, 20875079), (20874432, 20875637), (20874432, 20876911), (20875136, 20876911), (20875724, 20876586), (20875724, 20876911), (20876613, 20876911), (20876616, 20876911), (20877083, 20877148), (20877477, 20877552), (20877677, 20881986), (20882191, 20882261), (20882464, 20885288), (20882464, 20903015), (20885806, 20890182), (20903559, 20918638), (20903559, 20916904), (20917120, 20918798), (20917120, 20918638), (20917142, 20918798)] 2021-10-25 09:34:04.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053901: ['FBtr0091905'] 2021-10-25 09:34:04.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053901 has a single transcript. 2021-10-25 09:34:04.991 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:04.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:04.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036489: ['FBtr0075645'] 2021-10-25 09:34:04.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036489 has a single transcript. 2021-10-25 09:34:04.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003023: ['FBtr0071236', 'FBtr0071237', 'FBtr0071238', 'FBtr0333146', 'FBtr0333147'] 2021-10-25 09:34:05.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053902: ['FBtr0091906'] 2021-10-25 09:34:05.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053902 has a single transcript. 2021-10-25 09:34:05.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036490: ['FBtr0075644'] 2021-10-25 09:34:05.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036490 has a single transcript. 2021-10-25 09:34:05.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039873: ['FBtr0085860'] 2021-10-25 09:34:05.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039873 has a single transcript. 2021-10-25 09:34:05.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053903: ['FBtr0091907'] 2021-10-25 09:34:05.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053903 has a single transcript. 2021-10-25 09:34:05.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29229348, 29229508), (29229577, 29230324), (29230810, 29231080), (29232098, 29232164), (29232807, 29232862)] 2021-10-25 09:34:05.012 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29229160, 29229577, 'FBtr0300833_exon_1') contains intron (29229348, 29229508) 2021-10-25 09:34:05.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036491: ['FBtr0113172'] 2021-10-25 09:34:05.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300833_exon_1'] 2021-10-25 09:34:05.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036491 has a single transcript. 2021-10-25 09:34:05.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039875: ['FBtr0085842', 'FBtr0330113'] 2021-10-25 09:34:05.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053904: ['FBtr0091908'] 2021-10-25 09:34:05.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053904 has a single transcript. 2021-10-25 09:34:05.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036492: ['FBtr0075618'] 2021-10-25 09:34:05.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036492 has a single transcript. 2021-10-25 09:34:05.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053905: ['FBtr0091909'] 2021-10-25 09:34:05.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053905 has a single transcript. 2021-10-25 09:34:05.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036493: ['FBtr0100360', 'FBtr0110880', 'FBtr0110881', 'FBtr0301185', 'FBtr0334105'] 2021-10-25 09:34:05.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053906: ['FBtr0091910'] 2021-10-25 09:34:05.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053906 has a single transcript. 2021-10-25 09:34:05.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053907: ['FBtr0091911'] 2021-10-25 09:34:05.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053907 has a single transcript. 2021-10-25 09:34:05.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053908: ['FBtr0091912'] 2021-10-25 09:34:05.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053908 has a single transcript. 2021-10-25 09:34:05.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31772679, 31772741), (31772798, 31772853), (31773042, 31773096), (31773946, 31774004), (31774219, 31774275)] 2021-10-25 09:34:05.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053909: ['FBtr0091913'] 2021-10-25 09:34:05.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053909 has a single transcript. 2021-10-25 09:34:05.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053910: ['FBtr0091914'] 2021-10-25 09:34:05.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053910 has a single transcript. 2021-10-25 09:34:05.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053912: ['FBtr0091916'] 2021-10-25 09:34:05.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053912 has a single transcript. 2021-10-25 09:34:05.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053914: ['FBtr0307215', 'FBtr0307216'] 2021-10-25 09:34:05.104 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8485680, 8485748), (8486993, 8487256), (8486993, 8487576), (8487382, 8487576), (8487713, 8487766), (8488162, 8488219), (8488374, 8488443), (8488541, 8488603), (8488838, 8488943), (8488838, 8489373), (8488838, 8489468), (8488852, 8489373)] 2021-10-25 09:34:05.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028479: ['FBtr0079857', 'FBtr0079858'] 2021-10-25 09:34:05.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039876: ['FBtr0085857', 'FBtr0330114'] 2021-10-25 09:34:05.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15304876, 15305297), (15305486, 15305570), (15305486, 15305576), (15305486, 15305550), (15305679, 15306512), (15306798, 15306956), (15307241, 15307308), (15307413, 15307674), (15308490, 15308559), (15308835, 15308920), (15308835, 15310957)] 2021-10-25 09:34:05.142 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15305460, 15305679, 'FBtr0110881_exon_1') contains intron (15305486, 15305570) 2021-10-25 09:34:05.142 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15305460, 15305679, 'FBtr0334105_exon_1') contains intron (15305486, 15305570) 2021-10-25 09:34:05.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110881_exon_1', 'FBtr0334105_exon_1'] 2021-10-25 09:34:05.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1575721, 1624137), (1575721, 1604925), (1604947, 1624137), (1609481, 1624137), (1610686, 1624137), (1612803, 1624137), (1612803, 1613865), (1613945, 1624137), (1622988, 1624137), (1624707, 1635831), (1636020, 1636095), (1636549, 1636638), (1636912, 1636999), (1637139, 1637283), (1637334, 1647364), (1637334, 1642884), (1637334, 1643067), (1637334, 1654391), (1637334, 1658787), (1655990, 1658787)] 2021-10-25 09:34:05.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7037096, 7037157), (7037343, 7037392), (7037545, 7037603)] 2021-10-25 09:34:05.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261564: ['FBtr0302766', 'FBtr0302767', 'FBtr0302768', 'FBtr0302769', 'FBtr0302770', 'FBtr0302771', 'FBtr0302772', 'FBtr0302773', 'FBtr0344190', 'FBtr0345077', 'FBtr0345078', 'FBtr0345079', 'FBtr0336697'] 2021-10-25 09:34:05.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9574406, 9574468), (9575238, 9575294), (9575435, 9575501), (9576229, 9576517), (9576380, 9576517)] 2021-10-25 09:34:05.162 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31775502, 31775558), (31775693, 31775747), (31775920, 31775983), (31776196, 31776248), (31776382, 31776444)] 2021-10-25 09:34:05.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.180 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085857': ['FBtr0330114']} 2021-10-25 09:34:05.181 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330114']] 2021-10-25 09:34:05.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039877: ['FBtr0085856', 'FBtr0085855', 'FBtr0307551', 'FBtr0307552'] 2021-10-25 09:34:05.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053919: ['FBtr0091923'] 2021-10-25 09:34:05.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053919 has a single transcript. 2021-10-25 09:34:05.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053920: ['FBtr0091924'] 2021-10-25 09:34:05.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053920 has a single transcript. 2021-10-25 09:34:05.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053922: ['FBtr0091926'] 2021-10-25 09:34:05.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053922 has a single transcript. 2021-10-25 09:34:05.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028480: ['FBtr0071444'] 2021-10-25 09:34:05.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028480 has a single transcript. 2021-10-25 09:34:05.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053923: ['FBtr0343846'] 2021-10-25 09:34:05.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053923 has a single transcript. 2021-10-25 09:34:05.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028481: ['FBtr0077949', 'FBtr0305064'] 2021-10-25 09:34:05.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053926: ['FBtr0091930', 'FBtr0344978'] 2021-10-25 09:34:05.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(923219, 930064), (923219, 950491), (930423, 950491), (950578, 951586), (952142, 952255), (953333, 953395), (953510, 956248), (956334, 956403), (956792, 956859), (956944, 957051), (957209, 957278)] 2021-10-25 09:34:05.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9443364, 9445701)] 2021-10-25 09:34:05.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31791256, 31791313), (31791485, 31791549), (31791737, 31791792), (31792084, 31792143), (31792650, 31792704), (31793470, 31793577), (31793607, 31793876)] 2021-10-25 09:34:05.314 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31793577, 31793907, 'FBtr0307551_exon_1') contains intron (31793607, 31793876) 2021-10-25 09:34:05.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307551_exon_1'] 2021-10-25 09:34:05.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003028: ['FBtr0070740', 'FBtr0070738', 'FBtr0070739', 'FBtr0100408', 'FBtr0301914'] 2021-10-25 09:34:05.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036494: ['FBtr0075614', 'FBtr0306307', 'FBtr0306308'] 2021-10-25 09:34:05.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028482: ['FBtr0077425'] 2021-10-25 09:34:05.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028482 has a single transcript. 2021-10-25 09:34:05.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053927: ['FBtr0091931'] 2021-10-25 09:34:05.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053927 has a single transcript. 2021-10-25 09:34:05.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028484: ['FBtr0073211'] 2021-10-25 09:34:05.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028484 has a single transcript. 2021-10-25 09:34:05.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053928: ['FBtr0091932'] 2021-10-25 09:34:05.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053928 has a single transcript. 2021-10-25 09:34:05.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053929: ['FBtr0303313'] 2021-10-25 09:34:05.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053929 has a single transcript. 2021-10-25 09:34:05.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028487: ['FBtr0082846', 'FBtr0082847', 'FBtr0112937', 'FBtr0112938', 'FBtr0112939', 'FBtr0334526', 'FBtr0334527', 'FBtr0334528', 'FBtr0334529'] 2021-10-25 09:34:05.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053958: ['FBtr0099994'] 2021-10-25 09:34:05.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053958 has a single transcript. 2021-10-25 09:34:05.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053963: ['FBtr0100004'] 2021-10-25 09:34:05.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053963 has a single transcript. 2021-10-25 09:34:05.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053964: ['FBtr0100005'] 2021-10-25 09:34:05.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053964 has a single transcript. 2021-10-25 09:34:05.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:05.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053965: ['FBtr0100006'] 2021-10-25 09:34:05.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053965 has a single transcript. 2021-10-25 09:34:05.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5049542, 5064452), (5063868, 5064452), (5064310, 5064452), (5065913, 5066072), (5067247, 5068135), (5067781, 5068135), (5068798, 5068894)] 2021-10-25 09:34:05.428 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5064452, 5067247, 'FBtr0070738_exon_2') contains intron (5065913, 5066072) 2021-10-25 09:34:05.428 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5064452, 5067247, 'FBtr0070739_exon_2') contains intron (5065913, 5066072) 2021-10-25 09:34:05.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5064452, 5067781, 'FBtr0100408_exon_2') contains intron (5065913, 5066072) 2021-10-25 09:34:05.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5064452, 5067247, 'FBtr0301914_exon_2') contains intron (5065913, 5066072) 2021-10-25 09:34:05.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070738_exon_2', 'FBtr0070739_exon_2', 'FBtr0100408_exon_2', 'FBtr0301914_exon_2'] 2021-10-25 09:34:05.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053966: ['FBtr0100007'] 2021-10-25 09:34:05.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053966 has a single transcript. 2021-10-25 09:34:05.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053969: ['FBtr0100010', 'FBtr0307394'] 2021-10-25 09:34:05.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039879: ['FBtr0085846'] 2021-10-25 09:34:05.466 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039879 has a single transcript. 2021-10-25 09:34:05.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039881: ['FBtr0085847', 'FBtr0085848', 'FBtr0305131', 'FBtr0344004'] 2021-10-25 09:34:05.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20392489, 20392640), (20393216, 20393278), (20393225, 20393278)] 2021-10-25 09:34:05.505 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22925484, 22925548), (22925612, 22927098), (22927171, 22927249), (22927447, 22927515), (22927629, 22929798), (22927629, 22929087), (22927629, 22927759), (22928840, 22929798), (22928840, 22929087), (22929291, 22929798), (22930073, 22930192), (22930319, 22930385), (22930319, 22930388), (22930319, 22931514), (22931166, 22931514), (22931280, 22931514)] 2021-10-25 09:34:05.508 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22925106, 22925612, 'FBtr0302768_exon_1') contains intron (22925484, 22925548) 2021-10-25 09:34:05.508 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22929087, 22930073, 'FBtr0302768_exon_5') contains intron (22929291, 22929798) 2021-10-25 09:34:05.508 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22925106, 22925612, 'FBtr0302769_exon_1') contains intron (22925484, 22925548) 2021-10-25 09:34:05.509 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22925106, 22925612, 'FBtr0302771_exon_1') contains intron (22925484, 22925548) 2021-10-25 09:34:05.509 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22925106, 22925612, 'FBtr0344190_exon_1') contains intron (22925484, 22925548) 2021-10-25 09:34:05.510 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22925106, 22925612, 'FBtr0345079_exon_1') contains intron (22925484, 22925548) 2021-10-25 09:34:05.510 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302768_exon_1', 'FBtr0302768_exon_5', 'FBtr0302769_exon_1', 'FBtr0302771_exon_1', 'FBtr0344190_exon_1', 'FBtr0345079_exon_1'] 2021-10-25 09:34:05.510 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036495: ['FBtr0075615'] 2021-10-25 09:34:05.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036495 has a single transcript. 2021-10-25 09:34:05.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036496: ['FBtr0075617', 'FBtr0332815'] 2021-10-25 09:34:05.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032906: ['FBtr0081438', 'FBtr0333011'] 2021-10-25 09:34:05.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053970: ['FBtr0100012', 'FBtr0100013', 'FBtr0346107'] 2021-10-25 09:34:05.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13695642, 13695705), (13695891, 13695960), (13696149, 13696202), (13696346, 13696436), (13696346, 13696826), (13696346, 13696441), (13696346, 13696438), (13696346, 13696443), (13696768, 13696826), (13697227, 13697291), (13697464, 13697522), (13697646, 13697834), (13698038, 13698090), (13698281, 13698342), (13698281, 13699067), (13698281, 13700091), (13698859, 13699067), (13699423, 13700091), (13700145, 13700682)] 2021-10-25 09:34:05.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31805639, 31805766), (31805735, 31805798), (31805735, 31805792)] 2021-10-25 09:34:05.582 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31805663, 31806769, 'FBtr0085848_exon_1') contains intron (31805735, 31805798) 2021-10-25 09:34:05.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085848_exon_1'] 2021-10-25 09:34:05.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15473642, 15473702), (15473886, 15474018)] 2021-10-25 09:34:05.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20925174, 20925263), (20925850, 20925913), (20925975, 20926033)] 2021-10-25 09:34:05.602 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15472196, 15473886, 'FBtr0332815_exon_2') contains intron (15473642, 15473702) 2021-10-25 09:34:05.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332815_exon_2'] 2021-10-25 09:34:05.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003034: ['FBtr0075836'] 2021-10-25 09:34:05.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003034 has a single transcript. 2021-10-25 09:34:05.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26318973, 26331395), (26331643, 26348913), (26349073, 26349601), (26349864, 26350079), (26350173, 26355599), (26355506, 26355599), (26356027, 26356215), (26356435, 26360563), (26360741, 26360809)] 2021-10-25 09:34:05.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036497: ['FBtr0075616'] 2021-10-25 09:34:05.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036497 has a single transcript. 2021-10-25 09:34:05.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003041: ['FBtr0076771', 'FBtr0076772', 'FBtr0076773', 'FBtr0076774', 'FBtr0112817', 'FBtr0306647'] 2021-10-25 09:34:05.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036498: ['FBtr0075544'] 2021-10-25 09:34:05.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036498 has a single transcript. 2021-10-25 09:34:05.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032907: ['FBtr0089944'] 2021-10-25 09:34:05.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032907 has a single transcript. 2021-10-25 09:34:05.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036499: ['FBtr0075546'] 2021-10-25 09:34:05.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036499 has a single transcript. 2021-10-25 09:34:05.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036500: ['FBtr0075547'] 2021-10-25 09:34:05.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036500 has a single transcript. 2021-10-25 09:34:05.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032908: ['FBtr0306031'] 2021-10-25 09:34:05.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032908 has a single transcript. 2021-10-25 09:34:05.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036501: ['FBtr0075548'] 2021-10-25 09:34:05.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036501 has a single transcript. 2021-10-25 09:34:05.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036502: ['FBtr0075604', 'FBtr0334085'] 2021-10-25 09:34:05.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032910: ['FBtr0081507', 'FBtr0331376', 'FBtr0331377', 'FBtr0331378'] 2021-10-25 09:34:05.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039882: ['FBtr0085852'] 2021-10-25 09:34:05.722 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039882 has a single transcript. 2021-10-25 09:34:05.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15506148, 15506226), (15506345, 15507472), (15507566, 15507798)] 2021-10-25 09:34:05.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039883: ['FBtr0309829', 'FBtr0343538', 'FBtr0343539', 'FBtr0302179', 'FBtr0302180', 'FBtr0302181', 'FBtr0304594', 'FBtr0304595'] 2021-10-25 09:34:05.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053971: ['FBtr0100014'] 2021-10-25 09:34:05.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053971 has a single transcript. 2021-10-25 09:34:05.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053977: ['FBtr0100020'] 2021-10-25 09:34:05.759 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053977 has a single transcript. 2021-10-25 09:34:05.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21058475, 21059340), (21059457, 21059546), (21059668, 21059726), (21059852, 21059926), (21060037, 21062260), (21062385, 21062454), (21062608, 21069354), (21069607, 21071302), (21069645, 21070770)] 2021-10-25 09:34:05.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053978: ['FBtr0310435', 'FBtr0310436', 'FBtr0310437', 'FBtr0308251', 'FBtr0334300'] 2021-10-25 09:34:05.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283461: ['FBtr0073073'] 2021-10-25 09:34:05.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283461 has a single transcript. 2021-10-25 09:34:05.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7896852, 7896911), (7897061, 7897121), (7897232, 7897297), (7898239, 7898302), (7898653, 7898722), (7898854, 7899268), (7898854, 7901614), (7898854, 7900079), (7901453, 7901614), (7901864, 7901958), (7902065, 7902139), (7902275, 7907121), (7902275, 7903195), (7907338, 7911421), (7907338, 7909160)] 2021-10-25 09:34:05.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.798 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036503: ['FBtr0075603'] 2021-10-25 09:34:05.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036503 has a single transcript. 2021-10-25 09:34:05.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283462: ['FBtr0087654', 'FBtr0339757'] 2021-10-25 09:34:05.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036504: ['FBtr0075556'] 2021-10-25 09:34:05.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036504 has a single transcript. 2021-10-25 09:34:05.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036505: ['FBtr0075599', 'FBtr0075600'] 2021-10-25 09:34:05.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13407094, 13407167), (13407380, 13407439), (13407942, 13407998)] 2021-10-25 09:34:05.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15522195, 15522359), (15522502, 15522559), (15522580, 15523511), (15522580, 15522967), (15523464, 15523832)] 2021-10-25 09:34:05.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(158442, 158499), (158577, 158643), (158662, 159221), (158704, 159221), (159712, 159766), (160275, 160331), (160461, 160524), (160763, 160821), (164395, 164461), (164656, 164714), (165064, 174110), (173736, 174110), (174164, 174784), (174968, 175515), (174968, 175521), (174968, 175109)] 2021-10-25 09:34:05.884 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (157574, 158577, 'FBtr0310435_exon_12') contains intron (158442, 158499) 2021-10-25 09:34:05.884 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (157574, 158577, 'FBtr0310437_exon_12') contains intron (158442, 158499) 2021-10-25 09:34:05.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310435_exon_12', 'FBtr0310437_exon_12'] 2021-10-25 09:34:05.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31813540, 31817818), (31813826, 31817818), (31818118, 31833396), (31826305, 31827722), (31828103, 31833396), (31833981, 31834037), (31834305, 31834374), (31834311, 31834374), (31834314, 31834374), (31835477, 31835542), (31836653, 31836721), (31836801, 31836871), (31837181, 31839879), (31837181, 31837773), (31837181, 31837769), (31837904, 31839879), (31838027, 31839879), (31840003, 31840096)] 2021-10-25 09:34:05.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032911: ['FBtr0329987', 'FBtr0329988'] 2021-10-25 09:34:05.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283467: ['FBtr0303164', 'FBtr0336864'] 2021-10-25 09:34:05.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036509: ['FBtr0075596'] 2021-10-25 09:34:05.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036509 has a single transcript. 2021-10-25 09:34:05.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036510: ['FBtr0075561', 'FBtr0331934', 'FBtr0306154', 'FBtr0306155', 'FBtr0306156'] 2021-10-25 09:34:05.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028490: ['FBtr0080242', 'FBtr0321293', 'FBtr0345719'] 2021-10-25 09:34:05.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21075715, 21077358), (21077504, 21077562), (21077757, 21078093), (21078185, 21078270), (21078408, 21078966), (21079121, 21079289), (21079956, 21080036), (21080135, 21080200)] 2021-10-25 09:34:05.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:05.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:05.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:05.962 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329987': ['FBtr0329988']} 2021-10-25 09:34:05.963 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329988']] 2021-10-25 09:34:05.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032913: ['FBtr0081464', 'FBtr0332033', 'FBtr0332034'] 2021-10-25 09:34:06.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11524499, 11524567), (11525667, 11528120), (11525667, 11525916), (11526012, 11528120)] 2021-10-25 09:34:06.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.001 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283468: ['FBtr0084032', 'FBtr0330049', 'FBtr0333931'] 2021-10-25 09:34:06.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003042: ['FBtr0078405'] 2021-10-25 09:34:06.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003042 has a single transcript. 2021-10-25 09:34:06.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15563519, 15563607), (15563729, 15564015), (15563729, 15564261), (15563928, 15564261), (15564085, 15564158)] 2021-10-25 09:34:06.028 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15563426, 15563729, 'FBtr0075561_exon_1') contains intron (15563519, 15563607) 2021-10-25 09:34:06.028 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15563426, 15563729, 'FBtr0306154_exon_1') contains intron (15563519, 15563607) 2021-10-25 09:34:06.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15563426, 15563928, 'FBtr0306155_exon_1') contains intron (15563519, 15563607) 2021-10-25 09:34:06.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15564015, 15565272, 'FBtr0306156_exon_3') contains intron (15564085, 15564158) 2021-10-25 09:34:06.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075561_exon_1', 'FBtr0306154_exon_1', 'FBtr0306155_exon_1', 'FBtr0306156_exon_3'] 2021-10-25 09:34:06.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21089431, 21089490)] 2021-10-25 09:34:06.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003044: ['FBtr0086735', 'FBtr0329998'] 2021-10-25 09:34:06.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261565: ['FBtr0302776', 'FBtr0302777', 'FBtr0302778', 'FBtr0302779', 'FBtr0302780', 'FBtr0302781', 'FBtr0302782', 'FBtr0302783', 'FBtr0302784', 'FBtr0302785', 'FBtr0302786', 'FBtr0302787', 'FBtr0332703', 'FBtr0306704', 'FBtr0346965'] 2021-10-25 09:34:06.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053983: ['FBtr0100028'] 2021-10-25 09:34:06.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053983 has a single transcript. 2021-10-25 09:34:06.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053985: ['FBtr0100030'] 2021-10-25 09:34:06.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053985 has a single transcript. 2021-10-25 09:34:06.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21120739, 21120833), (21120969, 21121029), (21121219, 21121552), (21122007, 21122071), (21122251, 21122321), (21122593, 21125161), (21125384, 21126937)] 2021-10-25 09:34:06.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18137411, 18137470), (18137643, 18137698), (18138773, 18138840)] 2021-10-25 09:34:06.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053986: ['FBtr0305542'] 2021-10-25 09:34:06.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053986 has a single transcript. 2021-10-25 09:34:06.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053987: ['FBtr0100032', 'FBtr0335390'] 2021-10-25 09:34:06.097 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084032': ['FBtr0330049']} 2021-10-25 09:34:06.097 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330049']] 2021-10-25 09:34:06.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028491: ['FBtr0070608', 'FBtr0070609', 'FBtr0070610', 'FBtr0340201', 'FBtr0340202'] 2021-10-25 09:34:06.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032914: ['FBtr0300444'] 2021-10-25 09:34:06.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032914 has a single transcript. 2021-10-25 09:34:06.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:06.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032916: ['FBtr0081465'] 2021-10-25 09:34:06.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032916 has a single transcript. 2021-10-25 09:34:06.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003046: ['FBtr0079388'] 2021-10-25 09:34:06.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003046 has a single transcript. 2021-10-25 09:34:06.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032919: ['FBtr0081468'] 2021-10-25 09:34:06.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032919 has a single transcript. 2021-10-25 09:34:06.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283469: ['FBtr0074504', 'FBtr0342787'] 2021-10-25 09:34:06.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032921: ['FBtr0081469', 'FBtr0343869'] 2021-10-25 09:34:06.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003048: ['FBtr0342766', 'FBtr0344153', 'FBtr0332381'] 2021-10-25 09:34:06.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17907851, 17908573), (17908713, 17908807), (17909669, 17909780), (17910009, 17910077)] 2021-10-25 09:34:06.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053988: ['FBtr0100033', 'FBtr0331983'] 2021-10-25 09:34:06.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21156328, 21156391)] 2021-10-25 09:34:06.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.199 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036512: ['FBtr0075563'] 2021-10-25 09:34:06.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036512 has a single transcript. 2021-10-25 09:34:06.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3869179, 3869498), (3869818, 3869952), (3870226, 3870317), (3870544, 3873117), (3872512, 3873117), (3872557, 3873117), (3873176, 3875901), (3875834, 3875901), (3876242, 3876314), (3876393, 3876454), (3877458, 3879006), (3877458, 3877627), (3879214, 3879512)] 2021-10-25 09:34:06.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036514: ['FBtr0075564'] 2021-10-25 09:34:06.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036514 has a single transcript. 2021-10-25 09:34:06.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039886: ['FBtr0085870', 'FBtr0085871', 'FBtr0344271'] 2021-10-25 09:34:06.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2225863, 2225905), (2225863, 2225917), (2226227, 2226281), (2227232, 2227321), (2230333, 2230389), (2231847, 2231997), (2232158, 2232219), (2232619, 2232679), (2233026, 2233082), (2235515, 2235578)] 2021-10-25 09:34:06.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036515: ['FBtr0075565', 'FBtr0075566'] 2021-10-25 09:34:06.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24700317, 24700378), (24700536, 24700604), (24701209, 24714470), (24715199, 24725338), (24727159, 24736613)] 2021-10-25 09:34:06.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032922: ['FBtr0081500', 'FBtr0301238'] 2021-10-25 09:34:06.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283471: ['FBtr0074520', 'FBtr0074521', 'FBtr0074522', 'FBtr0074523', 'FBtr0074524', 'FBtr0074525', 'FBtr0074526', 'FBtr0308235', 'FBtr0308236', 'FBtr0308237', 'FBtr0336895', 'FBtr0336896', 'FBtr0336897'] 2021-10-25 09:34:06.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15583881, 15583996), (15583881, 15584286), (15584095, 15584286), (15584439, 15584639), (15584868, 15584922)] 2021-10-25 09:34:06.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21157647, 21157710), (21158243, 21158303), (21158480, 21158534)] 2021-10-25 09:34:06.302 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21157432, 21158243, 'FBtr0081500_exon_3') contains intron (21157647, 21157710) 2021-10-25 09:34:06.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081500_exon_3'] 2021-10-25 09:34:06.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31978314, 31989251), (31987127, 31989251), (31989329, 31989386), (31989526, 31989590), (31989530, 31989590)] 2021-10-25 09:34:06.307 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.307 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053993: ['FBtr0100046', 'FBtr0301034'] 2021-10-25 09:34:06.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003053: ['FBtr0070680', 'FBtr0100265'] 2021-10-25 09:34:06.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036516: ['FBtr0075592', 'FBtr0300329', 'FBtr0301186', 'FBtr0332095'] 2021-10-25 09:34:06.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032923: ['FBtr0081470', 'FBtr0081471', 'FBtr0343870'] 2021-10-25 09:34:06.360 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5933991, 5934053), (5934334, 5934404), (5934693, 5937398), (5934693, 5935184), (5937732, 5937828), (5938006, 5950292)] 2021-10-25 09:34:06.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16865404, 16866520), (16865426, 16866665), (16865437, 16866665), (16866946, 16883918), (16884004, 16896803), (16887389, 16896803), (16891314, 16896234), (16891318, 16896234), (16896347, 16896407), (16896599, 16896803), (16897180, 16897383), (16897628, 16912128), (16902068, 16902128), (16902191, 16906822), (16902191, 16902377), (16902191, 16912128), (16906750, 16906822), (16911591, 16912139), (16911591, 16912128), (16911879, 16912128), (16912329, 16913223), (16913398, 16920881), (16916424, 16919470), (16916424, 16919466), (16916446, 16919470), (16919702, 16920881), (16921051, 16921179), (16921366, 16921436)] 2021-10-25 09:34:06.367 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16896234, 16896599, 'FBtr0302782_exon_2') contains intron (16896347, 16896407) 2021-10-25 09:34:06.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302782_exon_2'] 2021-10-25 09:34:06.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4618063, 4619974), (4618063, 4619969), (4620860, 4621151)] 2021-10-25 09:34:06.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028494: ['FBtr0086886', 'FBtr0086887', 'FBtr0301202', 'FBtr0340273'] 2021-10-25 09:34:06.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039887: ['FBtr0085873', 'FBtr0344005'] 2021-10-25 09:34:06.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053995: ['FBtr0100048', 'FBtr0100049', 'FBtr0100050'] 2021-10-25 09:34:06.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15586594, 15587004), (15586600, 15587004), (15587596, 15588054)] 2021-10-25 09:34:06.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21158900, 21159006), (21159197, 21159271)] 2021-10-25 09:34:06.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003057: ['FBtr0074400', 'FBtr0346194'] 2021-10-25 09:34:06.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(32039347, 32039397)] 2021-10-25 09:34:06.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:06.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17705190, 17706353), (17708045, 17715705), (17708045, 17708608), (17717749, 17719173)] 2021-10-25 09:34:06.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5043383, 5044306), (5043383, 5044582), (5044689, 5045821), (5045925, 5046146), (5047206, 5047272), (5047479, 5047542)] 2021-10-25 09:34:06.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039889: ['FBtr0089153', 'FBtr0308248', 'FBtr0333677'] 2021-10-25 09:34:06.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032924: ['FBtr0081499'] 2021-10-25 09:34:06.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032924 has a single transcript. 2021-10-25 09:34:06.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032925: ['FBtr0081472'] 2021-10-25 09:34:06.532 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032925 has a single transcript. 2021-10-25 09:34:06.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032929: ['FBtr0081475'] 2021-10-25 09:34:06.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032929 has a single transcript. 2021-10-25 09:34:06.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003060: ['FBtr0082860', 'FBtr0334496'] 2021-10-25 09:34:06.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032934: ['FBtr0081488'] 2021-10-25 09:34:06.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032934 has a single transcript. 2021-10-25 09:34:06.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032935: ['FBtr0081487', 'FBtr0331678'] 2021-10-25 09:34:06.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18106032, 18106505), (18106032, 18106680), (18106548, 18106680), (18106822, 18106887), (18106931, 18109469), (18106931, 18111937), (18106931, 18110503), (18106931, 18112561), (18109570, 18113257), (18110604, 18113257), (18112038, 18113257), (18112662, 18113257), (18113381, 18113446), (18113569, 18114605), (18113569, 18114443), (18113569, 18113729), (18113575, 18114610), (18113575, 18113739), (18113922, 18114610), (18114532, 18114605), (18114646, 18116706)] 2021-10-25 09:34:06.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036518: ['FBtr0075567', 'FBtr0075568', 'FBtr0075569', 'FBtr0290065', 'FBtr0303510', 'FBtr0332092', 'FBtr0332093'] 2021-10-25 09:34:06.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(177992, 178777), (178836, 178936), (178880, 178936), (179034, 179091), (179211, 179260), (179211, 179263)] 2021-10-25 09:34:06.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.577 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:06.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.582 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0053998: ['FBtr0100053'] 2021-10-25 09:34:06.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0053998 has a single transcript. 2021-10-25 09:34:06.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21213166, 21213222), (21213768, 21213916), (21214647, 21220259)] 2021-10-25 09:34:06.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054001: ['FBtr0300947', 'FBtr0334066'] 2021-10-25 09:34:06.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028496: ['FBtr0086718', 'FBtr0086719', 'FBtr0086720', 'FBtr0086721'] 2021-10-25 09:34:06.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10631195, 10634074), (10634198, 10634296), (10634198, 10634266)] 2021-10-25 09:34:06.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003062: ['FBtr0071982'] 2021-10-25 09:34:06.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003062 has a single transcript. 2021-10-25 09:34:06.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003065: ['FBtr0085859'] 2021-10-25 09:34:06.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003065 has a single transcript. 2021-10-25 09:34:06.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032938: ['FBtr0081483', 'FBtr0081484', 'FBtr0114602', 'FBtr0346464', 'FBtr0330678', 'FBtr0330679', 'FBtr0330680'] 2021-10-25 09:34:06.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003067: ['FBtr0086701'] 2021-10-25 09:34:06.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003067 has a single transcript. 2021-10-25 09:34:06.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003068: ['FBtr0070477', 'FBtr0332311'] 2021-10-25 09:34:06.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039890: ['FBtr0089148', 'FBtr0089149', 'FBtr0089150', 'FBtr0089146', 'FBtr0089147', 'FBtr0308247'] 2021-10-25 09:34:06.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2685900, 2688196), (2688339, 2688399), (2689439, 2689503), (2689860, 2689922), (2691637, 2691707), (2691944, 2692008), (2692149, 2692207), (2692390, 2692476)] 2021-10-25 09:34:06.726 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2692207, 2692780, 'FBtr0070477_exon_8') contains intron (2692390, 2692476) 2021-10-25 09:34:06.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054002: ['FBtr0302155'] 2021-10-25 09:34:06.726 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070477_exon_8'] 2021-10-25 09:34:06.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054002 has a single transcript. 2021-10-25 09:34:06.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054003: ['FBtr0100058'] 2021-10-25 09:34:06.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054003 has a single transcript. 2021-10-25 09:34:06.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054005: ['FBtr0300216', 'FBtr0344762'] 2021-10-25 09:34:06.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15589996, 15600415), (15600617, 15600687), (15600871, 15601232), (15601295, 15601634), (15601295, 15606658), (15601295, 15604835), (15602515, 15602664), (15602515, 15606658), (15602515, 15604835), (15605280, 15606658), (15605755, 15606658)] 2021-10-25 09:34:06.749 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15601634, 15603119, 'FBtr0075568_exon_5') contains intron (15602515, 15602664) 2021-10-25 09:34:06.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18457598, 18460565), (18458470, 18460565), (18460644, 18460911), (18461228, 18461294), (18461537, 18461596), (18462680, 18462737), (18462833, 18464850), (18465033, 18466978), (18467093, 18467377), (18467507, 18467574), (18468022, 18469501), (18469959, 18470063), (18470976, 18474586), (18474752, 18475288), (18475433, 18475493), (18475669, 18476111), (18476419, 18476483), (18477023, 18496746), (18496868, 18497841), (18496905, 18497755)] 2021-10-25 09:34:06.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075568_exon_5'] 2021-10-25 09:34:06.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003071: ['FBtr0088420', 'FBtr0088421', 'FBtr0088422', 'FBtr0304925', 'FBtr0333067'] 2021-10-25 09:34:06.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18048170, 18048222), (18048546, 18048602)] 2021-10-25 09:34:06.791 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.791 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(184614, 184669), (184795, 185826), (185916, 185977), (186840, 187996), (188169, 188229), (188369, 188424), (188523, 188577), (189248, 189525), (189248, 193672), (189248, 189997), (190061, 191308), (190061, 193544), (190061, 193672), (190061, 193343), (191386, 193343)] 2021-10-25 09:34:06.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.829 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21263123, 21263722), (21263123, 21263647), (21263179, 21263647), (21263786, 21273323), (21273771, 21273827), (21274139, 21274199), (21274429, 21275378), (21275656, 21275723), (21275806, 21277277), (21275806, 21279883), (21275806, 21277196), (21275806, 21277229), (21275806, 21281131), (21278429, 21281131), (21278429, 21279883), (21280447, 21281131), (21281337, 21281395)] 2021-10-25 09:34:06.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054006: ['FBtr0344481'] 2021-10-25 09:34:06.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054006 has a single transcript. 2021-10-25 09:34:06.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054007: ['FBtr0100062', 'FBtr0339235'] 2021-10-25 09:34:06.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10109885, 10109950), (10109885, 10109932), (10110053, 10110105), (10110173, 10110231), (10110547, 10112616), (10110547, 10111473), (10111575, 10112616), (10112958, 10113015), (10113170, 10113542), (10113170, 10113284), (10113170, 10114125), (10113393, 10114916), (10113651, 10114916), (10114234, 10114916), (10115105, 10115314), (10115757, 10115814), (10116657, 10116736)] 2021-10-25 09:34:06.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028497: ['FBtr0072028', 'FBtr0072029', 'FBtr0112940'] 2021-10-25 09:34:06.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20495238, 20495296)] 2021-10-25 09:34:06.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054008: ['FBtr0100063'] 2021-10-25 09:34:06.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054008 has a single transcript. 2021-10-25 09:34:06.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23389658, 23389718), (23389941, 23390005), (23390248, 23390304), (23390817, 23390894), (23391124, 23391191), (23391326, 23391389), (23391673, 23391740), (23391903, 23393363), (23391903, 23392980), (23393480, 23396428), (23393480, 23394916)] 2021-10-25 09:34:06.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:06.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:06.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054010: ['FBtr0100065'] 2021-10-25 09:34:06.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054010 has a single transcript. 2021-10-25 09:34:06.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054011: ['FBtr0343391'] 2021-10-25 09:34:06.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054011 has a single transcript. 2021-10-25 09:34:06.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054012: ['FBtr0100067'] 2021-10-25 09:34:06.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054012 has a single transcript. 2021-10-25 09:34:06.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054015: ['FBtr0100070'] 2021-10-25 09:34:06.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054015 has a single transcript. 2021-10-25 09:34:06.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261566: ['FBtr0302802'] 2021-10-25 09:34:07.000 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261566 has a single transcript. 2021-10-25 09:34:07.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054021: ['FBtr0100076'] 2021-10-25 09:34:07.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054021 has a single transcript. 2021-10-25 09:34:07.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261567: ['FBtr0302803'] 2021-10-25 09:34:07.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261567 has a single transcript. 2021-10-25 09:34:07.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054024: ['FBtr0308933'] 2021-10-25 09:34:07.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054024 has a single transcript. 2021-10-25 09:34:07.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261568: ['FBtr0343681'] 2021-10-25 09:34:07.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261568 has a single transcript. 2021-10-25 09:34:07.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054025: ['FBtr0290083'] 2021-10-25 09:34:07.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054025 has a single transcript. 2021-10-25 09:34:07.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054026: ['FBtr0100081', 'FBtr0343410'] 2021-10-25 09:34:07.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261570: ['FBtr0302833', 'FBtr0302834', 'FBtr0302835', 'FBtr0302836', 'FBtr0302837', 'FBtr0340629', 'FBtr0340630', 'FBtr0340631', 'FBtr0340632'] 2021-10-25 09:34:07.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036519: ['FBtr0075591'] 2021-10-25 09:34:07.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036519 has a single transcript. 2021-10-25 09:34:07.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036520: ['FBtr0075590', 'FBtr0332094'] 2021-10-25 09:34:07.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039896: ['FBtr0089115'] 2021-10-25 09:34:07.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039896 has a single transcript. 2021-10-25 09:34:07.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028499: ['FBtr0083559', 'FBtr0336469'] 2021-10-25 09:34:07.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9534023, 9534084)] 2021-10-25 09:34:07.082 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039897: ['FBtr0089116', 'FBtr0089119', 'FBtr0300796', 'FBtr0300797', 'FBtr0300798', 'FBtr0300799', 'FBtr0300800', 'FBtr0308086', 'FBtr0308087', 'FBtr0333671'] 2021-10-25 09:34:07.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003074: ['FBtr0088679', 'FBtr0088680', 'FBtr0088681'] 2021-10-25 09:34:07.104 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15611189, 15611248), (15611417, 15611478), (15611723, 15611819), (15612561, 15612762)] 2021-10-25 09:34:07.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.107 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18199976, 18212408), (18200440, 18212408), (18213161, 18213214), (18214598, 18214665)] 2021-10-25 09:34:07.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032940: ['FBtr0081527', 'FBtr0081524', 'FBtr0081525', 'FBtr0301457', 'FBtr0301458', 'FBtr0301459', 'FBtr0301460', 'FBtr0301461', 'FBtr0301462', 'FBtr0301463', 'FBtr0301464'] 2021-10-25 09:34:07.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283472: ['FBtr0077114', 'FBtr0333264'] 2021-10-25 09:34:07.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054027: ['FBtr0100082'] 2021-10-25 09:34:07.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054027 has a single transcript. 2021-10-25 09:34:07.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054028: ['FBtr0100083'] 2021-10-25 09:34:07.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054028 has a single transcript. 2021-10-25 09:34:07.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036522: ['FBtr0075570'] 2021-10-25 09:34:07.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036522 has a single transcript. 2021-10-25 09:34:07.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054029: ['FBtr0100084'] 2021-10-25 09:34:07.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054029 has a single transcript. 2021-10-25 09:34:07.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8911370, 8911425), (8911954, 8912016), (8912256, 8912604), (8913187, 8913432), (8913570, 8913709)] 2021-10-25 09:34:07.169 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8913432, 8914069, 'FBtr0088679_exon_1') contains intron (8913570, 8913709) 2021-10-25 09:34:07.169 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8913432, 8913886, 'FBtr0088681_exon_1') contains intron (8913570, 8913709) 2021-10-25 09:34:07.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088679_exon_1', 'FBtr0088681_exon_1'] 2021-10-25 09:34:07.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028500: ['FBtr0078512', 'FBtr0334751'] 2021-10-25 09:34:07.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054030: ['FBtr0100085'] 2021-10-25 09:34:07.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054030 has a single transcript. 2021-10-25 09:34:07.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036527: ['FBtr0075577'] 2021-10-25 09:34:07.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036527 has a single transcript. 2021-10-25 09:34:07.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054031: ['FBtr0308948'] 2021-10-25 09:34:07.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054031 has a single transcript. 2021-10-25 09:34:07.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036528: ['FBtr0075581'] 2021-10-25 09:34:07.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036528 has a single transcript. 2021-10-25 09:34:07.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054033: ['FBtr0100088'] 2021-10-25 09:34:07.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054033 has a single transcript. 2021-10-25 09:34:07.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036529: ['FBtr0075578'] 2021-10-25 09:34:07.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036529 has a single transcript. 2021-10-25 09:34:07.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5800717, 5805827), (5805935, 5806006), (5806255, 5806314), (5806405, 5806492), (5806684, 5806746), (5806880, 5806944), (5807076, 5807133), (5807260, 5807947), (5807988, 5810289)] 2021-10-25 09:34:07.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054034: ['FBtr0300407'] 2021-10-25 09:34:07.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054034 has a single transcript. 2021-10-25 09:34:07.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036531: ['FBtr0075502'] 2021-10-25 09:34:07.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036531 has a single transcript. 2021-10-25 09:34:07.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054038: ['FBtr0307197', 'FBtr0299878'] 2021-10-25 09:34:07.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036532: ['FBtr0075503'] 2021-10-25 09:34:07.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036532 has a single transcript. 2021-10-25 09:34:07.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22260373, 22260623), (22262696, 22262757), (22262696, 22262753)] 2021-10-25 09:34:07.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036534: ['FBtr0075539', 'FBtr0075538', 'FBtr0100528', 'FBtr0304975'] 2021-10-25 09:34:07.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17711119, 17720586), (17720699, 17720947), (17720699, 17721422), (17720974, 17721422), (17721615, 17736197), (17721615, 17746570), (17723249, 17734711), (17735263, 17736197), (17736269, 17746570), (17741017, 17746570), (17746691, 17746770), (17746898, 17746967), (17750486, 17750553), (17750848, 17751029), (17750848, 17751008)] 2021-10-25 09:34:07.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283473: ['FBtr0074634', 'FBtr0307198', 'FBtr0307199'] 2021-10-25 09:34:07.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25168018, 25169002), (25168120, 25169002), (25169194, 25169257), (25169528, 25169594)] 2021-10-25 09:34:07.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028504: ['FBtr0072955', 'FBtr0332040', 'FBtr0344989'] 2021-10-25 09:34:07.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003076: ['FBtr0075492'] 2021-10-25 09:34:07.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003076 has a single transcript. 2021-10-25 09:34:07.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003079: ['FBtr0070401', 'FBtr0344007'] 2021-10-25 09:34:07.308 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15822011, 15822070), (15822014, 15822070), (15822808, 15822962), (15823181, 15823246), (15823755, 15823814), (15823989, 15825470), (15823989, 15824167), (15823989, 15826285)] 2021-10-25 09:34:07.309 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15823246, 15823989, 'FBtr0075539_exon_2') contains intron (15823755, 15823814) 2021-10-25 09:34:07.309 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15823246, 15823989, 'FBtr0075538_exon_2') contains intron (15823755, 15823814) 2021-10-25 09:34:07.310 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15823246, 15823989, 'FBtr0304975_exon_2') contains intron (15823755, 15823814) 2021-10-25 09:34:07.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075539_exon_2', 'FBtr0075538_exon_2', 'FBtr0304975_exon_2'] 2021-10-25 09:34:07.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054039: ['FBtr0301014'] 2021-10-25 09:34:07.316 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054039 has a single transcript. 2021-10-25 09:34:07.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(230895, 231934), (231600, 231934), (231627, 231934), (231977, 232278), (231977, 234264), (232848, 234264), (234345, 234863), (234345, 236394), (234944, 236394), (236475, 237268), (237559, 239937), (237559, 240313), (240072, 240313), (240398, 243265), (240398, 240644), (240833, 242460), (240833, 242487), (240833, 243265), (242679, 243169), (242679, 243265), (243585, 243633), (243748, 244417), (243748, 245179), (244834, 245179)] 2021-10-25 09:34:07.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18789089, 18790505), (18789089, 18790511), (18790309, 18790505), (18790615, 18790676), (18790893, 18790957), (18791081, 18791145), (18791244, 18791300), (18791459, 18793758), (18793847, 18805293), (18805581, 18805640)] 2021-10-25 09:34:07.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054040: ['FBtr0100095'] 2021-10-25 09:34:07.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054040 has a single transcript. 2021-10-25 09:34:07.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2295958, 2296153), (2296353, 2339990), (2341048, 2341177), (2342139, 2342203), (2342344, 2342412), (2342786, 2342851)] 2021-10-25 09:34:07.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054041: ['FBtr0304737', 'FBtr0332434', 'FBtr0332435'] 2021-10-25 09:34:07.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2597142, 2597193), (2599070, 2599264), (2599070, 2599124)] 2021-10-25 09:34:07.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003082: ['FBtr0088838', 'FBtr0088839'] 2021-10-25 09:34:07.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21286425, 21286488), (21286618, 21287203), (21287327, 21287390), (21287994, 21288051), (21289404, 21289461), (21289548, 21289614), (21289744, 21297694), (21297811, 21301453), (21301527, 21303776), (21301527, 21304824), (21304931, 21308287), (21308810, 21309579), (21308938, 21309945), (21308938, 21309938), (21308995, 21310000), (21309018, 21309579), (21309091, 21310000), (21309091, 21309579)] 2021-10-25 09:34:07.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30508236, 30508286), (30508438, 30508495), (30508616, 30508665), (30508811, 30508900), (30509174, 30509220), (30509372, 30509422), (30509573, 30509630), (30509815, 30509865)] 2021-10-25 09:34:07.399 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30509422, 30509815, 'FBtr0332435_exon_7') contains intron (30509573, 30509630) 2021-10-25 09:34:07.399 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332435_exon_7'] 2021-10-25 09:34:07.399 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21308287, 21310050, 'FBtr0301457_exon_1') contains intron (21308810, 21309579) 2021-10-25 09:34:07.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.400 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21308287, 21310050, 'FBtr0301459_exon_1') contains intron (21308810, 21309579) 2021-10-25 09:34:07.401 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301457_exon_1', 'FBtr0301459_exon_1'] 2021-10-25 09:34:07.401 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283476: ['FBtr0074509'] 2021-10-25 09:34:07.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283476 has a single transcript. 2021-10-25 09:34:07.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283477: ['FBtr0083272', 'FBtr0304727'] 2021-10-25 09:34:07.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7825545, 7825599), (7826871, 7826933)] 2021-10-25 09:34:07.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028506: ['FBtr0080836'] 2021-10-25 09:34:07.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028506 has a single transcript. 2021-10-25 09:34:07.444 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7825520, 7826871, 'FBtr0088839_exon_1') contains intron (7825545, 7825599) 2021-10-25 09:34:07.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088839_exon_1'] 2021-10-25 09:34:07.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028507: ['FBtr0080761', 'FBtr0305560'] 2021-10-25 09:34:07.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036536: ['FBtr0075506'] 2021-10-25 09:34:07.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036536 has a single transcript. 2021-10-25 09:34:07.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036537: ['FBtr0075537', 'FBtr0306855', 'FBtr0332134'] 2021-10-25 09:34:07.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16340762, 16340821), (16340946, 16341228), (16341598, 16341727)] 2021-10-25 09:34:07.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.496 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15764621, 15764782), (15765208, 15765272), (15765577, 15765674), (15765589, 15765674)] 2021-10-25 09:34:07.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054043: ['FBtr0300408'] 2021-10-25 09:34:07.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054043 has a single transcript. 2021-10-25 09:34:07.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054044: ['FBtr0308934'] 2021-10-25 09:34:07.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054044 has a single transcript. 2021-10-25 09:34:07.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003086: ['FBtr0070537'] 2021-10-25 09:34:07.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003086 has a single transcript. 2021-10-25 09:34:07.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054045: ['FBtr0302390'] 2021-10-25 09:34:07.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054045 has a single transcript. 2021-10-25 09:34:07.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003087: ['FBtr0080001', 'FBtr0332190'] 2021-10-25 09:34:07.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054046: ['FBtr0308935'] 2021-10-25 09:34:07.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054046 has a single transcript. 2021-10-25 09:34:07.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054047: ['FBtr0308936'] 2021-10-25 09:34:07.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054047 has a single transcript. 2021-10-25 09:34:07.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283478: ['FBtr0079866', 'FBtr0335504', 'FBtr0345287'] 2021-10-25 09:34:07.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054049: ['FBtr0302372'] 2021-10-25 09:34:07.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054049 has a single transcript. 2021-10-25 09:34:07.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15834451, 15834733), (15834879, 15835193), (15834883, 15835193)] 2021-10-25 09:34:07.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054051: ['FBtr0100106', 'FBtr0304045'] 2021-10-25 09:34:07.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028509: ['FBtr0080546', 'FBtr0080547', 'FBtr0080548'] 2021-10-25 09:34:07.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10363138, 10363201), (10363525, 10363588)] 2021-10-25 09:34:07.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19960350, 19960404), (19960590, 19960658), (19960593, 19960658), (19960781, 19960853)] 2021-10-25 09:34:07.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9763734, 9763835), (9764648, 9764769)] 2021-10-25 09:34:07.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261571: ['FBtr0302857'] 2021-10-25 09:34:07.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261571 has a single transcript. 2021-10-25 09:34:07.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13836432, 13891299), (13879706, 13891299), (13891532, 13895028), (13894375, 13895028), (13895170, 13895254), (13895389, 13895456), (13896740, 13896804), (13896922, 13896985), (13897361, 13897425)] 2021-10-25 09:34:07.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261573: ['FBtr0336667', 'FBtr0302859', 'FBtr0302860', 'FBtr0302861', 'FBtr0302862', 'FBtr0302863', 'FBtr0302864', 'FBtr0307901', 'FBtr0307902', 'FBtr0307903'] 2021-10-25 09:34:07.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003089: ['FBtr0075012', 'FBtr0075013', 'FBtr0075003', 'FBtr0075004', 'FBtr0075005', 'FBtr0075007', 'FBtr0075008', 'FBtr0075009', 'FBtr0075010', 'FBtr0075011', 'FBtr0300340', 'FBtr0333897'] 2021-10-25 09:34:07.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036538: ['FBtr0075536', 'FBtr0306854'] 2021-10-25 09:34:07.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054052: ['FBtr0308938', 'FBtr0308939'] 2021-10-25 09:34:07.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15836248, 15836779), (15836929, 15837091), (15836929, 15837256), (15837128, 15837256)] 2021-10-25 09:34:07.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283479: ['FBtr0078396', 'FBtr0331821'] 2021-10-25 09:34:07.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2322060, 2322128), (2322060, 2322124)] 2021-10-25 09:34:07.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039900: ['FBtr0089134', 'FBtr0089139', 'FBtr0089137', 'FBtr0343990', 'FBtr0305658'] 2021-10-25 09:34:07.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028513: ['FBtr0080512'] 2021-10-25 09:34:07.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028513 has a single transcript. 2021-10-25 09:34:07.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028514: ['FBtr0300612'] 2021-10-25 09:34:07.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028514 has a single transcript. 2021-10-25 09:34:07.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21442501, 21442631), (21442522, 21442631), (21443736, 21443840), (21444100, 21444674)] 2021-10-25 09:34:07.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028515: ['FBtr0080824', 'FBtr0331442', 'FBtr0331443'] 2021-10-25 09:34:07.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036544: ['FBtr0089527', 'FBtr0334070', 'FBtr0334071'] 2021-10-25 09:34:07.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054054: ['FBtr0100109'] 2021-10-25 09:34:07.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054054 has a single transcript. 2021-10-25 09:34:07.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054056: ['FBtr0100833'] 2021-10-25 09:34:07.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0054056 has a single transcript. 2021-10-25 09:34:07.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0054057: ['FBtr0100835', 'FBtr0100834'] 2021-10-25 09:34:07.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283480: ['FBtr0071782'] 2021-10-25 09:34:07.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283480 has a single transcript. 2021-10-25 09:34:07.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283494: ['FBtr0072163'] 2021-10-25 09:34:07.810 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283494 has a single transcript. 2021-10-25 09:34:07.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283499: ['FBtr0084121', 'FBtr0290230', 'FBtr0290231', 'FBtr0290232'] 2021-10-25 09:34:07.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(897539, 897609), (897976, 898031), (898401, 898463)] 2021-10-25 09:34:07.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (897379, 897976, 'FBtr0100834_exon_1') contains intron (897539, 897609) 2021-10-25 09:34:07.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100834_exon_1'] 2021-10-25 09:34:07.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(280239, 281723), (280239, 280324), (280431, 280496), (280537, 281723), (281892, 281947), (282028, 282435), (282738, 302241), (302323, 302385), (302526, 305360), (302526, 305015), (305178, 306439), (305178, 305731), (305178, 306059), (305178, 305695)] 2021-10-25 09:34:07.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16257765, 16258036), (16258179, 16258248)] 2021-10-25 09:34:07.829 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (280324, 280537, 'FBtr0089139_exon_7') contains intron (280431, 280496) 2021-10-25 09:34:07.829 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (280324, 280537, 'FBtr0089137_exon_8') contains intron (280431, 280496) 2021-10-25 09:34:07.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.829 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (280324, 280537, 'FBtr0343990_exon_8') contains intron (280431, 280496) 2021-10-25 09:34:07.830 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089139_exon_7', 'FBtr0089137_exon_8', 'FBtr0343990_exon_8'] 2021-10-25 09:34:07.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15903454, 15903758), (15903889, 15903948), (15904121, 15904182), (15904258, 15904316), (15904421, 15904483), (15904650, 15904706), (15904865, 15905196), (15904865, 15905178), (15904865, 15905148), (15905636, 15905702), (15905927, 15905993), (15906193, 15906636), (15906852, 15908707), (15908858, 15908924), (15909151, 15910500), (15910595, 15911153), (15911652, 15924287)] 2021-10-25 09:34:07.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19521958, 19522167), (19522389, 19523002), (19522397, 19523002), (19522569, 19523002), (19522635, 19523002), (19523315, 19523386), (19523434, 19523494), (19523629, 19523714), (19523929, 19523989), (19524163, 19528640), (19524163, 19528634), (19524163, 19526840), (19524163, 19525178), (19527328, 19527620), (19527834, 19528634), (19528444, 19528634), (19528823, 19528893), (19529601, 19529673)] 2021-10-25 09:34:07.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032943: ['FBtr0273404'] 2021-10-25 09:34:07.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032943 has a single transcript. 2021-10-25 09:34:07.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032945: ['FBtr0081517'] 2021-10-25 09:34:07.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032945 has a single transcript. 2021-10-25 09:34:07.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032946: ['FBtr0081518', 'FBtr0081519', 'FBtr0081520', 'FBtr0333355'] 2021-10-25 09:34:07.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058002: ['FBtr0113773', 'FBtr0339924'] 2021-10-25 09:34:07.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19299137, 19299395), (19299550, 19299637), (19300197, 19313155), (19300681, 19300763), (19300918, 19300970), (19301530, 19313155), (19301873, 19301935), (19302495, 19313155), (19302827, 19302883), (19303038, 19303109), (19303669, 19313155), (19304073, 19304139), (19304294, 19304359), (19304922, 19313155), (19305554, 19305739), (19305894, 19305952), (19306512, 19313155), (19306885, 19306947), (19307102, 19307323), (19307880, 19313155), (19308178, 19308240), (19308395, 19308454), (19308699, 19308755), (19309073, 19313155), (19309684, 19309740), (19309895, 19309951), (19310793, 19313155), (19310796, 19313155), (19311311, 19311618), (19312184, 19313155), (19313214, 19318783), (19318950, 19337341)] 2021-10-25 09:34:07.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19300763, 19301530, 'FBtr0300340_exon_4') contains intron (19300918, 19300970) 2021-10-25 09:34:07.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300340_exon_4'] 2021-10-25 09:34:07.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21575916, 21575987), (21576292, 21576350), (21577004, 21577067), (21577182, 21577284), (21577709, 21577783), (21578146, 21578211), (21578500, 21578559), (21578729, 21578796), (21579372, 21579469), (21580688, 21587952), (21588009, 21591966), (21588009, 21589970), (21588009, 21603019), (21603573, 21618726), (21603573, 21619021)] 2021-10-25 09:34:07.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028516: ['FBtr0080714', 'FBtr0080715'] 2021-10-25 09:34:07.925 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24976434, 24976488), (24976612, 24976678)] 2021-10-25 09:34:07.926 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036545: ['FBtr0075509', 'FBtr0273189', 'FBtr0333572'] 2021-10-25 09:34:07.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21380361, 21382041), (21380361, 21382018), (21380478, 21382018), (21382330, 21384454), (21384595, 21385277), (21385397, 21388281), (21385397, 21388502), (21388287, 21388502), (21388669, 21388731), (21388842, 21388913), (21389079, 21390051)] 2021-10-25 09:34:07.959 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15229074, 15229543), (15229691, 15229852), (15230354, 15236604), (15236784, 15240464), (15240585, 15241410), (15241521, 15246173), (15241521, 15245557), (15246352, 15247562)] 2021-10-25 09:34:07.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:07.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058005: ['FBtr0347083'] 2021-10-25 09:34:07.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058005 has a single transcript. 2021-10-25 09:34:07.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15955309, 15955387), (15955314, 15955387), (15955547, 15955610)] 2021-10-25 09:34:07.998 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:07.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058006: ['FBtr0111230'] 2021-10-25 09:34:08.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058006 has a single transcript. 2021-10-25 09:34:08.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058045: ['FBtr0111163', 'FBtr0304740', 'FBtr0331585', 'FBtr0331586'] 2021-10-25 09:34:08.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039902: ['FBtr0089133', 'FBtr0340652', 'FBtr0340653', 'FBtr0333681'] 2021-10-25 09:34:08.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028517: ['FBtr0080757'] 2021-10-25 09:34:08.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028517 has a single transcript. 2021-10-25 09:34:08.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028518: ['FBtr0080755', 'FBtr0343716', 'FBtr0343717'] 2021-10-25 09:34:08.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283500: ['FBtr0072652', 'FBtr0303217'] 2021-10-25 09:34:08.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036547: ['FBtr0075511', 'FBtr0333574'] 2021-10-25 09:34:08.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15630374, 15630440), (15630543, 15630660), (15631618, 15631684)] 2021-10-25 09:34:08.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24028723, 24028810), (24028723, 24030754), (24028938, 24030754), (24030854, 24035431), (24030857, 24034877), (24030857, 24035431), (24035018, 24035431)] 2021-10-25 09:34:08.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.111 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(313298, 313356), (313642, 313698), (313642, 314019), (313642, 313747)] 2021-10-25 09:34:08.112 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.112 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032949: ['FBtr0085896'] 2021-10-25 09:34:08.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1247947, 1248255), (1248188, 1248255)] 2021-10-25 09:34:08.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032949 has a single transcript. 2021-10-25 09:34:08.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032955: ['FBtr0085923', 'FBtr0085922', 'FBtr0085921', 'FBtr0100511', 'FBtr0345685', 'FBtr0305503'] 2021-10-25 09:34:08.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15959383, 15959687)] 2021-10-25 09:34:08.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283501: ['FBtr0347349', 'FBtr0347350', 'FBtr0445387'] 2021-10-25 09:34:08.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036549: ['FBtr0075512'] 2021-10-25 09:34:08.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036549 has a single transcript. 2021-10-25 09:34:08.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036550: ['FBtr0075513'] 2021-10-25 09:34:08.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036550 has a single transcript. 2021-10-25 09:34:08.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028519: ['FBtr0080591'] 2021-10-25 09:34:08.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028519 has a single transcript. 2021-10-25 09:34:08.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036551: ['FBtr0075514', 'FBtr0333575'] 2021-10-25 09:34:08.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028520: ['FBtr0080815'] 2021-10-25 09:34:08.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028520 has a single transcript. 2021-10-25 09:34:08.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30697621, 30697678), (30697837, 30701976), (30697837, 30698767), (30697837, 30697943)] 2021-10-25 09:34:08.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028523: ['FBtr0080880', 'FBtr0340234'] 2021-10-25 09:34:08.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058053: ['FBtr0334764'] 2021-10-25 09:34:08.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058053 has a single transcript. 2021-10-25 09:34:08.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261574: ['FBtr0332721', 'FBtr0332722', 'FBtr0346077'] 2021-10-25 09:34:08.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15977555, 15977954)] 2021-10-25 09:34:08.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058064: ['FBtr0301807', 'FBtr0301808'] 2021-10-25 09:34:08.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21615040, 21615102), (21615526, 21615607), (21615676, 21616181), (21616573, 21617279), (21617432, 21617493), (21617821, 21618003), (21618110, 21623365), (21618110, 21618708), (21618110, 21618495)] 2021-10-25 09:34:08.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039904: ['FBtr0089125', 'FBtr0089126', 'FBtr0307379', 'FBtr0334479', 'FBtr0345284'] 2021-10-25 09:34:08.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16400526, 16404485), (16404841, 16404938), (16405955, 16448313)] 2021-10-25 09:34:08.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036552: ['FBtr0075515', 'FBtr0302493'] 2021-10-25 09:34:08.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(702599, 702712), (702653, 702712), (702880, 702931), (703101, 703162), (703505, 703561)] 2021-10-25 09:34:08.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20005489, 20008799), (20006653, 20008799), (20012252, 20012310), (20012417, 20012475), (20012683, 20012738), (20012800, 20012864), (20013020, 20013082), (20013455, 20013517), (20014526, 20014581), (20014767, 20014826), (20015001, 20015057), (20015320, 20015377), (20016107, 20016168), (20016346, 20016408), (20016849, 20016906), (20017307, 20017372), (20017681, 20017743), (20023048, 20023110), (20023392, 20023450), (20023639, 20023952), (20023639, 20024155), (20023982, 20024155), (20024287, 20024348)] 2021-10-25 09:34:08.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028525: ['FBtr0080830'] 2021-10-25 09:34:08.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028525 has a single transcript. 2021-10-25 09:34:08.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283503: ['FBtr0445388'] 2021-10-25 09:34:08.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283503 has a single transcript. 2021-10-25 09:34:08.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028526: ['FBtr0080603', 'FBtr0346641'] 2021-10-25 09:34:08.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283508: ['FBtr0305701', 'FBtr0305702', 'FBtr0305703', 'FBtr0305704', 'FBtr0305705'] 2021-10-25 09:34:08.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15979022, 15979303), (15979407, 15979467)] 2021-10-25 09:34:08.357 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058068: ['FBtr0302912'] 2021-10-25 09:34:08.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058068 has a single transcript. 2021-10-25 09:34:08.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(359980, 360586), (360284, 360586), (360358, 360586), (361006, 362303), (362613, 362670), (362882, 362945), (363134, 363493), (363639, 364023), (363639, 363867), (363645, 363867), (364941, 365673), (365805, 365859), (366762, 369506), (369744, 369809), (369964, 371090), (371357, 371812), (372176, 372249)] 2021-10-25 09:34:08.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (365673, 366762, 'FBtr0089125_exon_8') contains intron (365805, 365859) 2021-10-25 09:34:08.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058100: ['FBtr0302913'] 2021-10-25 09:34:08.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (365673, 366762, 'FBtr0089126_exon_8') contains intron (365805, 365859) 2021-10-25 09:34:08.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058100 has a single transcript. 2021-10-25 09:34:08.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14109140, 14109194)] 2021-10-25 09:34:08.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.380 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (365673, 366762, 'FBtr0334479_exon_8') contains intron (365805, 365859) 2021-10-25 09:34:08.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.380 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (365673, 366762, 'FBtr0345284_exon_8') contains intron (365805, 365859) 2021-10-25 09:34:08.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089125_exon_8', 'FBtr0089126_exon_8', 'FBtr0334479_exon_8', 'FBtr0345284_exon_8'] 2021-10-25 09:34:08.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058160: ['FBtr0113813', 'FBtr0301797', 'FBtr0301802', 'FBtr0301803', 'FBtr0301804', 'FBtr0333380'] 2021-10-25 09:34:08.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003090: ['FBtr0089042', 'FBtr0089043', 'FBtr0089044'] 2021-10-25 09:34:08.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036553: ['FBtr0075516', 'FBtr0333576'] 2021-10-25 09:34:08.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261575: ['FBtr0084847'] 2021-10-25 09:34:08.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261575 has a single transcript. 2021-10-25 09:34:08.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028527: ['FBtr0080527', 'FBtr0080528', 'FBtr0331332', 'FBtr0331333', 'FBtr0331334'] 2021-10-25 09:34:08.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261580: ['FBtr0302889', 'FBtr0347025'] 2021-10-25 09:34:08.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15980953, 15981184)] 2021-10-25 09:34:08.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.463 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17502960, 17505635), (17506011, 17506157), (17506011, 17506160), (17506310, 17507443), (17506745, 17507443)] 2021-10-25 09:34:08.464 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17506157, 17507459, 'FBtr0305704_exon_3') contains intron (17506310, 17507443) 2021-10-25 09:34:08.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305704_exon_3'] 2021-10-25 09:34:08.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7151530, 7208979), (7172868, 7208979), (7187613, 7192602), (7194032, 7208979), (7209568, 7219054), (7219168, 7220453), (7220582, 7220673), (7220877, 7221001)] 2021-10-25 09:34:08.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.500 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19944418, 19944480), (19944631, 19944691), (19944786, 19944839), (19945169, 19945229), (19945386, 19945438), (19945533, 19945580)] 2021-10-25 09:34:08.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.502 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032956: ['FBtr0085899', 'FBtr0085900'] 2021-10-25 09:34:08.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26215898, 26219967), (26215898, 26224648), (26220152, 26224648), (26222008, 26224648), (26222031, 26224648), (26222064, 26224648), (26222077, 26224648)] 2021-10-25 09:34:08.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036556: ['FBtr0075521', 'FBtr0333579'] 2021-10-25 09:34:08.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13666122, 13667974), (13668353, 13668689), (13668805, 13668863), (13669385, 13670437), (13669385, 13669544), (13670597, 13671414), (13670597, 13671018), (13670597, 13672138), (13672221, 13672356), (13672712, 13672777)] 2021-10-25 09:34:08.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13670437, 13671247, 'FBtr0080528_exon_5') contains intron (13670597, 13671018) 2021-10-25 09:34:08.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080528_exon_5'] 2021-10-25 09:34:08.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21658854, 21659094), (21658961, 21659094), (21659272, 21659839), (21660064, 21660122), (21661200, 21661347), (21661465, 21661529), (21661636, 21662083), (21662452, 21662517), (21662631, 21662688)] 2021-10-25 09:34:08.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261581: ['FBtr0310548', 'FBtr0302888'] 2021-10-25 09:34:08.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15995066, 15995134), (15995288, 15995357), (15995539, 15995609), (15995845, 16003898), (15995845, 15999169), (15999238, 16003898), (16004074, 16004348)] 2021-10-25 09:34:08.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039907: ['FBtr0089111'] 2021-10-25 09:34:08.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039907 has a single transcript. 2021-10-25 09:34:08.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003091: ['FBtr0087048', 'FBtr0087049', 'FBtr0112819', 'FBtr0331960', 'FBtr0305069', 'FBtr0305070'] 2021-10-25 09:34:08.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039908: ['FBtr0300342', 'FBtr0300343', 'FBtr0300344', 'FBtr0344869', 'FBtr0332904', 'FBtr0332905', 'FBtr0332906', 'FBtr0332907', 'FBtr0332908'] 2021-10-25 09:34:08.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032957: ['FBtr0085918', 'FBtr0085914', 'FBtr0085915', 'FBtr0100618', 'FBtr0085917', 'FBtr0332967', 'FBtr0304885'] 2021-10-25 09:34:08.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19946163, 19946221), (19946287, 19946429), (19946378, 19946429), (19946524, 19946571)] 2021-10-25 09:34:08.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036557: ['FBtr0075519'] 2021-10-25 09:34:08.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036557 has a single transcript. 2021-10-25 09:34:08.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036560: ['FBtr0075437', 'FBtr0333614'] 2021-10-25 09:34:08.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283509: ['FBtr0072202', 'FBtr0072203'] 2021-10-25 09:34:08.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16035636, 16035732), (16036291, 16036351), (16036701, 16036776)] 2021-10-25 09:34:08.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.675 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261582: ['FBtr0302892', 'FBtr0302893'] 2021-10-25 09:34:08.708 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23985695, 23985762), (23986101, 23986159), (23986208, 23986261), (23986394, 23987336), (23987409, 23987466), (23987554, 23987617), (23987675, 23988113)] 2021-10-25 09:34:08.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028530: ['FBtr0080641'] 2021-10-25 09:34:08.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028530 has a single transcript. 2021-10-25 09:34:08.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14008306, 14008363), (14008435, 14008495)] 2021-10-25 09:34:08.721 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14008363, 14008799, 'FBtr0302893_exon_2') contains intron (14008435, 14008495) 2021-10-25 09:34:08.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302893_exon_2'] 2021-10-25 09:34:08.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036563: ['FBtr0301031'] 2021-10-25 09:34:08.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036563 has a single transcript. 2021-10-25 09:34:08.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028531: ['FBtr0080625', 'FBtr0343676'] 2021-10-25 09:34:08.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036565: ['FBtr0075497', 'FBtr0333599'] 2021-10-25 09:34:08.731 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16924790, 16926345), (16924977, 16926345), (16925037, 16926345), (16925745, 16926345), (16926807, 16931111), (16926807, 16928124), (16928151, 16931111), (16931143, 16931198), (16931278, 16936418), (16931278, 16932463), (16932578, 16940092), (16936530, 16940092), (16939844, 16940092), (16940221, 16940900), (16941057, 16941143), (16941492, 16941573), (16941747, 16941804), (16941896, 16941952), (16942154, 16942222), (16942411, 16942474), (16942615, 16942673)] 2021-10-25 09:34:08.732 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058172: ['FBtr0344578'] 2021-10-25 09:34:08.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058172 has a single transcript. 2021-10-25 09:34:08.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058178: ['FBtr0113817', 'FBtr0113818', 'FBtr0333869'] 2021-10-25 09:34:08.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21665595, 21665917), (21666004, 21666062), (21666377, 21668105), (21668236, 21668292), (21669238, 21669366), (21669913, 21670101), (21669913, 21670448), (21669913, 21670534), (21670481, 21670534), (21671140, 21671228), (21671391, 21672289), (21672469, 21672856), (21673272, 21675865), (21673272, 21677054), (21673272, 21677117), (21673272, 21677498)] 2021-10-25 09:34:08.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:08.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283510: ['FBtr0088385', 'FBtr0339422', 'FBtr0339423'] 2021-10-25 09:34:08.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16089708, 16089763)] 2021-10-25 09:34:08.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261583: ['FBtr0302894'] 2021-10-25 09:34:08.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261583 has a single transcript. 2021-10-25 09:34:08.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261584: ['FBtr0334011', 'FBtr0302896'] 2021-10-25 09:34:08.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(472520, 472577), (472677, 473146), (473719, 474452), (474768, 474959), (474768, 477291), (475104, 476962), (477102, 477291), (478083, 478537), (478738, 480034), (478738, 478799), (478868, 480034), (480238, 480301), (480691, 480775), (481141, 481208), (481704, 485209), (481704, 481810), (481704, 483500), (481704, 482483), (481704, 488847)] 2021-10-25 09:34:08.814 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (474452, 475104, 'FBtr0300344_exon_10') contains intron (474768, 474959) 2021-10-25 09:34:08.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300344_exon_10'] 2021-10-25 09:34:08.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25798742, 25843724), (25844107, 25873859), (25874085, 25874141), (25874384, 25924295), (25924456, 25933195), (25933410, 25961359), (25961540, 25969033), (25969180, 25969229), (25969627, 25977966), (25978150, 26013542), (25978150, 26008060), (26008177, 26010106), (26010354, 26013542), (26013568, 26014020)] 2021-10-25 09:34:08.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028532: ['FBtr0080551'] 2021-10-25 09:34:08.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028532 has a single transcript. 2021-10-25 09:34:08.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028533: ['FBtr0080550', 'FBtr0343666'] 2021-10-25 09:34:08.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036566: ['FBtr0075444', 'FBtr0302503', 'FBtr0333598'] 2021-10-25 09:34:08.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9959634, 9959701), (9959872, 9959948), (9960302, 9960525), (9960703, 9960762), (9961003, 9961562), (9962062, 9962225), (9962660, 9963197)] 2021-10-25 09:34:08.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22943404, 22943460), (22943506, 22943560), (22943703, 22943762), (22944341, 22944401), (22944450, 22944516), (22944650, 22944708)] 2021-10-25 09:34:08.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13848106, 13848251)] 2021-10-25 09:34:08.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261586: ['FBtr0344486', 'FBtr0344487'] 2021-10-25 09:34:08.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16090521, 16091515), (16090918, 16091515), (16091858, 16092531), (16092698, 16092755), (16092959, 16093015), (16093648, 16093704), (16093922, 16093987), (16094548, 16094606), (16094770, 16094828), (16095042, 16095105), (16096003, 16096056)] 2021-10-25 09:34:08.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058182: ['FBtr0302347'] 2021-10-25 09:34:08.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058182 has a single transcript. 2021-10-25 09:34:08.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028534: ['FBtr0080549'] 2021-10-25 09:34:08.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028534 has a single transcript. 2021-10-25 09:34:08.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058191: ['FBtr0113824', 'FBtr0113825', 'FBtr0113826', 'FBtr0113827', 'FBtr0334735'] 2021-10-25 09:34:08.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21326775, 21326844)] 2021-10-25 09:34:08.932 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21326659, 21327114, 'FBtr0344486_exon_1') contains intron (21326775, 21326844) 2021-10-25 09:34:08.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344486_exon_1'] 2021-10-25 09:34:08.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028537: ['FBtr0080691', 'FBtr0301739'] 2021-10-25 09:34:08.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283521: ['FBtr0343132', 'FBtr0089365', 'FBtr0089347', 'FBtr0089350', 'FBtr0089348', 'FBtr0089361', 'FBtr0089360', 'FBtr0089352', 'FBtr0089357', 'FBtr0089366', 'FBtr0089355', 'FBtr0089353', 'FBtr0089356', 'FBtr0089359', 'FBtr0089344', 'FBtr0089362', 'FBtr0089346', 'FBtr0089349', 'FBtr0089345', 'FBtr0089342', 'FBtr0089364', 'FBtr0089351', 'FBtr0089363', 'FBtr0089343', 'FBtr0100286'] 2021-10-25 09:34:08.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14737651, 14737718)] 2021-10-25 09:34:08.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:08.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:08.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003093: ['FBtr0085359', 'FBtr0301516', 'FBtr0339149', 'FBtr0339150'] 2021-10-25 09:34:08.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261587: ['FBtr0302904'] 2021-10-25 09:34:08.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261587 has a single transcript. 2021-10-25 09:34:09.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036567: ['FBtr0075496'] 2021-10-25 09:34:09.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036567 has a single transcript. 2021-10-25 09:34:09.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261588: ['FBtr0302918', 'FBtr0302919', 'FBtr0339349', 'FBtr0339350'] 2021-10-25 09:34:09.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036568: ['FBtr0075446'] 2021-10-25 09:34:09.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036568 has a single transcript. 2021-10-25 09:34:09.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036569: ['FBtr0302328'] 2021-10-25 09:34:09.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036569 has a single transcript. 2021-10-25 09:34:09.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036570: ['FBtr0075495'] 2021-10-25 09:34:09.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036570 has a single transcript. 2021-10-25 09:34:09.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028538: ['FBtr0080537'] 2021-10-25 09:34:09.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028538 has a single transcript. 2021-10-25 09:34:09.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036571: ['FBtr0075452', 'FBtr0301912', 'FBtr0333292'] 2021-10-25 09:34:09.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032961: ['FBtr0085903', 'FBtr0085904', 'FBtr0085905'] 2021-10-25 09:34:09.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028539: ['FBtr0110941', 'FBtr0300996'] 2021-10-25 09:34:09.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1264370, 1264443), (1264493, 1264547), (1264841, 1265170), (1265110, 1265170), (1265293, 1265342), (1266052, 1266191)] 2021-10-25 09:34:09.058 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1264392, 1264841, 'FBtr0113824_exon_1') contains intron (1264493, 1264547) 2021-10-25 09:34:09.058 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1265342, 1266349, 'FBtr0113824_exon_3') contains intron (1266052, 1266191) 2021-10-25 09:34:09.058 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1265342, 1267747, 'FBtr0113825_exon_4') contains intron (1266052, 1266191) 2021-10-25 09:34:09.059 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1265342, 1266349, 'FBtr0334735_exon_3') contains intron (1266052, 1266191) 2021-10-25 09:34:09.059 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113824_exon_1', 'FBtr0113824_exon_3', 'FBtr0113825_exon_4', 'FBtr0334735_exon_3'] 2021-10-25 09:34:09.060 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29039364, 29041095), (29040072, 29041095), (29041425, 29041599), (29041793, 29041866), (29041924, 29041989), (29042102, 29042166), (29042240, 29044366), (29042240, 29042825), (29042857, 29044366), (29044437, 29044496), (29044437, 29044499), (29045718, 29045869), (29046009, 29046062)] 2021-10-25 09:34:09.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.106 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13784352, 13784470), (13784594, 13784785), (13784986, 13785050), (13785521, 13785579), (13785732, 13785796), (13785738, 13785796), (13785975, 13786279), (13785975, 13786209), (13786496, 13786558), (13786859, 13786922), (13787235, 13787299), (13787451, 13787512), (13787696, 13787798), (13788036, 13788096), (13788720, 13788787), (13789790, 13789856)] 2021-10-25 09:34:09.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21758099, 21758201), (21758142, 21758201), (21758359, 21758441), (21759078, 21759230), (21759366, 21760479)] 2021-10-25 09:34:09.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16122093, 16122145), (16122305, 16122361), (16122464, 16122523), (16122464, 16122595), (16125351, 16125411), (16125783, 16125845)] 2021-10-25 09:34:09.128 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21758009, 21758359, 'FBtr0085903_exon_1') contains intron (21758099, 21758201) 2021-10-25 09:34:09.128 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16122001, 16122305, 'FBtr0301912_exon_1') contains intron (16122093, 16122145) 2021-10-25 09:34:09.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085903_exon_1'] 2021-10-25 09:34:09.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301912_exon_1'] 2021-10-25 09:34:09.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8328007, 8347500), (8348294, 8387755), (8387594, 8387755), (8388221, 8388948), (8389506, 8390179), (8391446, 8391500), (8391736, 8393556), (8393737, 8395030), (8393737, 8394562), (8393737, 8394565), (8394619, 8395030), (8395114, 8395210), (8395359, 8395434)] 2021-10-25 09:34:09.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039909: ['FBtr0089105', 'FBtr0333676'] 2021-10-25 09:34:09.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028540: ['FBtr0080576', 'FBtr0343663', 'FBtr0346632'] 2021-10-25 09:34:09.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(569056, 569113), (569301, 569974), (570176, 570233), (570343, 570408), (570533, 570603), (570781, 571534)] 2021-10-25 09:34:09.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032964: ['FBtr0085909'] 2021-10-25 09:34:09.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032964 has a single transcript. 2021-10-25 09:34:09.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032965: ['FBtr0085950'] 2021-10-25 09:34:09.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032965 has a single transcript. 2021-10-25 09:34:09.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036574: ['FBtr0089713', 'FBtr0089714', 'FBtr0307518'] 2021-10-25 09:34:09.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032966: ['FBtr0085928'] 2021-10-25 09:34:09.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032966 has a single transcript. 2021-10-25 09:34:09.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003114: ['FBtr0086306'] 2021-10-25 09:34:09.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003114 has a single transcript. 2021-10-25 09:34:09.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032967: ['FBtr0085929'] 2021-10-25 09:34:09.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13775047, 13775254), (13775185, 13775254), (13775406, 13775470), (13775808, 13775877), (13776034, 13776097), (13776156, 13777770), (13777822, 13779644)] 2021-10-25 09:34:09.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032967 has a single transcript. 2021-10-25 09:34:09.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058198: ['FBtr0333189', 'FBtr0301809'] 2021-10-25 09:34:09.248 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13774339, 13775406, 'FBtr0346632_exon_6') contains intron (13775047, 13775254) 2021-10-25 09:34:09.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346632_exon_6'] 2021-10-25 09:34:09.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003116: ['FBtr0070389'] 2021-10-25 09:34:09.257 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003116 has a single transcript. 2021-10-25 09:34:09.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032968: ['FBtr0085930', 'FBtr0343880'] 2021-10-25 09:34:09.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003117: ['FBtr0083220', 'FBtr0083221', 'FBtr0335426', 'FBtr0335427'] 2021-10-25 09:34:09.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039911: ['FBtr0089079', 'FBtr0089080'] 2021-10-25 09:34:09.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261592: ['FBtr0071135', 'FBtr0071136'] 2021-10-25 09:34:09.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16132289, 16132385), (16132289, 16132539), (16133238, 16133293), (16135786, 16136195)] 2021-10-25 09:34:09.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4162048, 4162107)] 2021-10-25 09:34:09.302 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16132027, 16133238, 'FBtr0089713_exon_1') contains intron (16132289, 16132385) 2021-10-25 09:34:09.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089713_exon_1'] 2021-10-25 09:34:09.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.308 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21917429, 21919528)] 2021-10-25 09:34:09.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(583225, 583788), (583252, 583788), (583863, 583935), (584018, 584761), (584931, 584989), (585174, 585297), (585772, 585839), (585938, 586901), (587093, 587842), (588042, 588571)] 2021-10-25 09:34:09.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7900289, 7900802), (7901007, 7901242)] 2021-10-25 09:34:09.339 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7900802, 7901331, 'FBtr0071136_exon_1') contains intron (7901007, 7901242) 2021-10-25 09:34:09.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071136_exon_1'] 2021-10-25 09:34:09.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028541: ['FBtr0080532', 'FBtr0343657'] 2021-10-25 09:34:09.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16026838, 16038586), (16035106, 16038586), (16039198, 16039269), (16039207, 16039269), (16039546, 16039614)] 2021-10-25 09:34:09.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058263: ['FBtr0301779', 'FBtr0301780', 'FBtr0301781', 'FBtr0334935', 'FBtr0334936'] 2021-10-25 09:34:09.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032969: ['FBtr0344210', 'FBtr0347504'] 2021-10-25 09:34:09.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039914: ['FBtr0089103'] 2021-10-25 09:34:09.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039914 has a single transcript. 2021-10-25 09:34:09.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039915: ['FBtr0089972', 'FBtr0089971'] 2021-10-25 09:34:09.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13747109, 13771044), (13771246, 13771336), (13772571, 13772640), (13772868, 13772932), (13773116, 13773183), (13773322, 13773382)] 2021-10-25 09:34:09.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036575: ['FBtr0075490'] 2021-10-25 09:34:09.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036575 has a single transcript. 2021-10-25 09:34:09.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261596: ['FBtr0071935'] 2021-10-25 09:34:09.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261596 has a single transcript. 2021-10-25 09:34:09.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036576: ['FBtr0346525', 'FBtr0307519', 'FBtr0307520', 'FBtr0307521'] 2021-10-25 09:34:09.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21974875, 21974928), (21977803, 21979321), (21979604, 21990890), (21981736, 21990848)] 2021-10-25 09:34:09.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261597: ['FBtr0081090', 'FBtr0081091', 'FBtr0081089', 'FBtr0346591', 'FBtr0331455'] 2021-10-25 09:34:09.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(629979, 631626), (631894, 632027), (632129, 632207), (632388, 632447), (632715, 633328), (633432, 633490), (633860, 633960), (633860, 633920), (634124, 634176), (634344, 634409)] 2021-10-25 09:34:09.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028542: ['FBtr0080617'] 2021-10-25 09:34:09.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028542 has a single transcript. 2021-10-25 09:34:09.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028543: ['FBtr0080618'] 2021-10-25 09:34:09.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028543 has a single transcript. 2021-10-25 09:34:09.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032971: ['FBtr0085935'] 2021-10-25 09:34:09.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032971 has a single transcript. 2021-10-25 09:34:09.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028544: ['FBtr0080557'] 2021-10-25 09:34:09.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028544 has a single transcript. 2021-10-25 09:34:09.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032972: ['FBtr0085943'] 2021-10-25 09:34:09.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032972 has a single transcript. 2021-10-25 09:34:09.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028546: ['FBtr0080511', 'FBtr0342905', 'FBtr0342906'] 2021-10-25 09:34:09.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2495023, 2520578), (2495023, 2522392), (2495023, 2515642), (2495023, 2521440), (2515908, 2521440), (2522511, 2522572), (2522730, 2553782), (2553877, 2565118), (2553877, 2564443), (2553877, 2562626), (2562805, 2565118), (2564669, 2565118)] 2021-10-25 09:34:09.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032973: ['FBtr0299905', 'FBtr0344787'] 2021-10-25 09:34:09.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039916: ['FBtr0089102', 'FBtr0110906', 'FBtr0344874'] 2021-10-25 09:34:09.509 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16141264, 16141326), (16141915, 16142039), (16142128, 16142201), (16142128, 16148407), (16148958, 16163668), (16148958, 16149289)] 2021-10-25 09:34:09.510 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.510 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003118: ['FBtr0089717', 'FBtr0089715', 'FBtr0089716', 'FBtr0334554'] 2021-10-25 09:34:09.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10484252, 10532038), (10488426, 10532038), (10489143, 10532038), (10491051, 10532038), (10492585, 10532038), (10498089, 10532038), (10502059, 10502357), (10502229, 10502357), (10502462, 10532038), (10506073, 10532038), (10509554, 10509794), (10510136, 10532038), (10511004, 10532038), (10515658, 10515834), (10516051, 10532038), (10518202, 10532038), (10519375, 10532038), (10521277, 10532038), (10522969, 10532038), (10524633, 10532038), (10525862, 10532038), (10526974, 10527065), (10527219, 10532038), (10532119, 10532180), (10532894, 10533117), (10533511, 10533575), (10533968, 10542904), (10533968, 10534849), (10533968, 10541344), (10533968, 10534177)] 2021-10-25 09:34:09.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22109161, 22109222), (22109161, 22109234)] 2021-10-25 09:34:09.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13639796, 13639859), (13640481, 13641109), (13641270, 13642019), (13642192, 13642295)] 2021-10-25 09:34:09.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13642019, 13642602, 'FBtr0342906_exon_1') contains intron (13642192, 13642295) 2021-10-25 09:34:09.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342906_exon_1'] 2021-10-25 09:34:09.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18442438, 18442504), (18443070, 18443152), (18443073, 18443152)] 2021-10-25 09:34:09.551 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18442034, 18443070, 'FBtr0081091_exon_2') contains intron (18442438, 18442504) 2021-10-25 09:34:09.551 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18441334, 18443070, 'FBtr0346591_exon_2') contains intron (18442438, 18442504) 2021-10-25 09:34:09.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081091_exon_2', 'FBtr0346591_exon_2'] 2021-10-25 09:34:09.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(636618, 639014), (639203, 639332), (639534, 639592), (640048, 640106), (640208, 640272), (640211, 640272), (640476, 640532), (640736, 642275), (642428, 642491), (642728, 643988), (644155, 645948), (646182, 646232), (646394, 646444)] 2021-10-25 09:34:09.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (639332, 640048, 'FBtr0089102_exon_10') contains intron (639534, 639592) 2021-10-25 09:34:09.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089102_exon_10'] 2021-10-25 09:34:09.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23291428, 23291495), (23291653, 23291716), (23292681, 23311981), (23292681, 23293850), (23292681, 23293844), (23312206, 23312886), (23313090, 23313441), (23313558, 23337895), (23313558, 23313664), (23337986, 23340181), (23340527, 23345397)] 2021-10-25 09:34:09.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032974: ['FBtr0331655', 'FBtr0331656', 'FBtr0331657'] 2021-10-25 09:34:09.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036577: ['FBtr0075485'] 2021-10-25 09:34:09.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036577 has a single transcript. 2021-10-25 09:34:09.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028550: ['FBtr0070244', 'FBtr0330391', 'FBtr0345507'] 2021-10-25 09:34:09.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039920: ['FBtr0089091', 'FBtr0310539', 'FBtr0310540', 'FBtr0310541'] 2021-10-25 09:34:09.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036579: ['FBtr0075457'] 2021-10-25 09:34:09.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036579 has a single transcript. 2021-10-25 09:34:09.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036580: ['FBtr0075483'] 2021-10-25 09:34:09.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036580 has a single transcript. 2021-10-25 09:34:09.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036581: ['FBtr0333560', 'FBtr0301481'] 2021-10-25 09:34:09.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22121413, 22121945), (22122180, 22122250), (22123681, 22123740), (22124028, 22124089), (22124216, 22124781)] 2021-10-25 09:34:09.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058298: ['FBtr0111169'] 2021-10-25 09:34:09.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058298 has a single transcript. 2021-10-25 09:34:09.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058354: ['FBtr0302346'] 2021-10-25 09:34:09.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058354 has a single transcript. 2021-10-25 09:34:09.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058439: ['FBtr0111232', 'FBtr0111233'] 2021-10-25 09:34:09.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1248008, 1251171), (1251261, 1251339), (1252096, 1274425), (1252096, 1259958), (1260008, 1274425)] 2021-10-25 09:34:09.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16232323, 16232379)] 2021-10-25 09:34:09.723 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.723 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.734 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0070244': ['FBtr0330391']} 2021-10-25 09:34:09.734 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330391']] 2021-10-25 09:34:09.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(671166, 671246), (671387, 680439), (671616, 680439), (680304, 680439), (681135, 684580)] 2021-10-25 09:34:09.745 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (671141, 671616, 'FBtr0310541_exon_1') contains intron (671166, 671246) 2021-10-25 09:34:09.745 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310541_exon_1'] 2021-10-25 09:34:09.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261599: ['FBtr0082136', 'FBtr0334681'] 2021-10-25 09:34:09.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003124: ['FBtr0074839', 'FBtr0100318'] 2021-10-25 09:34:09.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22798103, 22798173), (22798122, 22798173)] 2021-10-25 09:34:09.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036583: ['FBtr0075482', 'FBtr0333564'] 2021-10-25 09:34:09.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9778196, 9778618), (9778718, 9778776)] 2021-10-25 09:34:09.786 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028552: ['FBtr0072187'] 2021-10-25 09:34:09.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028552 has a single transcript. 2021-10-25 09:34:09.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20310408, 20311048), (20311273, 20311334), (20312117, 20312182), (20312611, 20312678)] 2021-10-25 09:34:09.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032979: ['FBtr0085964', 'FBtr0100407'] 2021-10-25 09:34:09.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028554: ['FBtr0079368', 'FBtr0332328'] 2021-10-25 09:34:09.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058441: ['FBtr0302914'] 2021-10-25 09:34:09.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058441 has a single transcript. 2021-10-25 09:34:09.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:09.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058461: ['FBtr0302353'] 2021-10-25 09:34:09.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058461 has a single transcript. 2021-10-25 09:34:09.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058469: ['FBtr0307364'] 2021-10-25 09:34:09.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058469 has a single transcript. 2021-10-25 09:34:09.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6915397, 6919523), (6915400, 6919523)] 2021-10-25 09:34:09.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22166987, 22167049), (22167238, 22167302), (22167253, 22167302), (22167576, 22167636), (22168066, 22168119), (22168320, 22168379), (22168643, 22168887)] 2021-10-25 09:34:09.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.849 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.849 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261602: ['FBtr0072924', 'FBtr0072925'] 2021-10-25 09:34:09.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0058470: ['FBtr0111152'] 2021-10-25 09:34:09.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0058470 has a single transcript. 2021-10-25 09:34:09.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003129: ['FBtr0111026'] 2021-10-25 09:34:09.859 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003129 has a single transcript. 2021-10-25 09:34:09.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0060291: ['FBtr0076635'] 2021-10-25 09:34:09.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0060291 has a single transcript. 2021-10-25 09:34:09.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003130: ['FBtr0087311', 'FBtr0329908'] 2021-10-25 09:34:09.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0060292: ['FBtr0076634'] 2021-10-25 09:34:09.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0060292 has a single transcript. 2021-10-25 09:34:09.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0060296: ['FBtr0072417', 'FBtr0333813', 'FBtr0333814'] 2021-10-25 09:34:09.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036584: ['FBtr0075481'] 2021-10-25 09:34:09.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036584 has a single transcript. 2021-10-25 09:34:09.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036585: ['FBtr0303379'] 2021-10-25 09:34:09.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036585 has a single transcript. 2021-10-25 09:34:09.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039923: ['FBtr0089254', 'FBtr0089253'] 2021-10-25 09:34:09.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028560: ['FBtr0089674'] 2021-10-25 09:34:09.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028560 has a single transcript. 2021-10-25 09:34:09.911 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2587513, 2587575), (2587513, 2587750), (2587890, 2588083)] 2021-10-25 09:34:09.911 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036586: ['FBtr0303380'] 2021-10-25 09:34:09.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036586 has a single transcript. 2021-10-25 09:34:09.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032981: ['FBtr0299879', 'FBtr0304739'] 2021-10-25 09:34:09.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028561: ['FBtr0088779', 'FBtr0332247'] 2021-10-25 09:34:09.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036587: ['FBtr0333562', 'FBtr0290260'] 2021-10-25 09:34:09.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15828073, 15830165), (15830245, 15830314), (15830455, 15831030), (15831513, 15834682)] 2021-10-25 09:34:09.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(781669, 783173), (783245, 783301), (783937, 786191), (787026, 787080), (787209, 787451), (787209, 788894)] 2021-10-25 09:34:09.946 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24922288, 24922355), (24923750, 24924482), (24924353, 24924413), (24924641, 24928244)] 2021-10-25 09:34:09.959 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22175602, 22182737), (22183466, 22183527), (22183466, 22183607)] 2021-10-25 09:34:09.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8089651, 8089712), (8089651, 8089704), (8090448, 8090504), (8090717, 8090779), (8090882, 8090935)] 2021-10-25 09:34:09.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:09.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:09.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:09.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003132: ['FBtr0074017'] 2021-10-25 09:34:09.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003132 has a single transcript. 2021-10-25 09:34:09.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261608: ['FBtr0302570', 'FBtr0079017', 'FBtr0079016'] 2021-10-25 09:34:09.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003134: ['FBtr0084642', 'FBtr0334334'] 2021-10-25 09:34:10.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039924: ['FBtr0100543', 'FBtr0100544'] 2021-10-25 09:34:10.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028562: ['FBtr0088778'] 2021-10-25 09:34:10.022 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028562 has a single transcript. 2021-10-25 09:34:10.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036588: ['FBtr0075464'] 2021-10-25 09:34:10.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036588 has a single transcript. 2021-10-25 09:34:10.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028563: ['FBtr0088777'] 2021-10-25 09:34:10.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028563 has a single transcript. 2021-10-25 09:34:10.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036589: ['FBtr0075465'] 2021-10-25 09:34:10.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036589 has a single transcript. 2021-10-25 09:34:10.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032986: ['FBtr0299875', 'FBtr0334168', 'FBtr0334169'] 2021-10-25 09:34:10.037 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24518707, 24518843), (24519192, 24519595), (24519881, 24519939), (24520087, 24520342)] 2021-10-25 09:34:10.038 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.038 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028567: ['FBtr0072695', 'FBtr0332655'] 2021-10-25 09:34:10.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036590: ['FBtr0075468'] 2021-10-25 09:34:10.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036590 has a single transcript. 2021-10-25 09:34:10.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036591: ['FBtr0075478'] 2021-10-25 09:34:10.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036591 has a single transcript. 2021-10-25 09:34:10.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061188: ['FBtr0302365'] 2021-10-25 09:34:10.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061188 has a single transcript. 2021-10-25 09:34:10.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036592: ['FBtr0075477'] 2021-10-25 09:34:10.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036592 has a single transcript. 2021-10-25 09:34:10.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1192652, 1192705), (1192770, 1193559), (1193654, 1193707), (1193859, 1195427), (1195596, 1195659), (1195790, 1195841), (1196091, 1196164), (1196262, 1196319), (1196477, 1196707), (1196477, 1196757)] 2021-10-25 09:34:10.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061196: ['FBtr0070727'] 2021-10-25 09:34:10.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061196 has a single transcript. 2021-10-25 09:34:10.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036593: ['FBtr0075475', 'FBtr0333561'] 2021-10-25 09:34:10.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5071030, 5071102), (5071157, 5071226), (5071355, 5071608)] 2021-10-25 09:34:10.071 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070999, 5071157, 'FBtr0079017_exon_1') contains intron (5071030, 5071102) 2021-10-25 09:34:10.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079017_exon_1'] 2021-10-25 09:34:10.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061197: ['FBtr0089670', 'FBtr0089671', 'FBtr0089668', 'FBtr0089669'] 2021-10-25 09:34:10.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:10.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003137: ['FBtr0300337', 'FBtr0301837', 'FBtr0301838', 'FBtr0301839'] 2021-10-25 09:34:10.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22240103, 22240169), (22240103, 22240153)] 2021-10-25 09:34:10.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039925: ['FBtr0089196'] 2021-10-25 09:34:10.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039925 has a single transcript. 2021-10-25 09:34:10.123 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16283580, 16283639), (16283743, 16283852)] 2021-10-25 09:34:10.124 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.124 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039927: ['FBtr0089195', 'FBtr0089194', 'FBtr0333701'] 2021-10-25 09:34:10.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028569: ['FBtr0081139'] 2021-10-25 09:34:10.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028569 has a single transcript. 2021-10-25 09:34:10.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028570: ['FBtr0077800', 'FBtr0331451'] 2021-10-25 09:34:10.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12303313, 12303561), (12303336, 12303402), (12303336, 12303561), (12303494, 12303561), (12303764, 12303822), (12303764, 12303862), (12304057, 12304127), (12304457, 12304521), (12304901, 12304964), (12305125, 12305219), (12305471, 12305528), (12305871, 12305930), (12305998, 12306061)] 2021-10-25 09:34:10.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261609: ['FBtr0074300', 'FBtr0343016'] 2021-10-25 09:34:10.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036594: ['FBtr0289964'] 2021-10-25 09:34:10.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036594 has a single transcript. 2021-10-25 09:34:10.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036595: ['FBtr0289963'] 2021-10-25 09:34:10.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036595 has a single transcript. 2021-10-25 09:34:10.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1126752, 1126808), (1126941, 1127001), (1127415, 1128488), (1128655, 1129434), (1129488, 1129565), (1129730, 1130024), (1130183, 1130382), (1130586, 1131192), (1131396, 1131488), (1131593, 1131700), (1131958, 1132084), (1131958, 1133874), (1132573, 1133874), (1134072, 1134151), (1134072, 1135093), (1135484, 1135538)] 2021-10-25 09:34:10.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2290642, 2290703)] 2021-10-25 09:34:10.199 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.199 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036596: ['FBtr0306796'] 2021-10-25 09:34:10.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036596 has a single transcript. 2021-10-25 09:34:10.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036597: ['FBtr0075471'] 2021-10-25 09:34:10.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036597 has a single transcript. 2021-10-25 09:34:10.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28521298, 28521356), (28521473, 28521541), (28521700, 28521814), (28521700, 28522481), (28522231, 28522481), (28522632, 28522694), (28523260, 28525870), (28523260, 28524033), (28523260, 28523526), (28523697, 28523779), (28523974, 28524033), (28524217, 28524273), (28525307, 28525416), (28525307, 28525870), (28525587, 28525870), (28526050, 28526109), (28529695, 28529751), (28530055, 28530118), (28531147, 28531279), (28531458, 28531518), (28531579, 28539918)] 2021-10-25 09:34:10.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16445885, 16446184)] 2021-10-25 09:34:10.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036598: ['FBtr0075469'] 2021-10-25 09:34:10.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036598 has a single transcript. 2021-10-25 09:34:10.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032987: ['FBtr0085961', 'FBtr0331295', 'FBtr0345541'] 2021-10-25 09:34:10.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036599: ['FBtr0075470'] 2021-10-25 09:34:10.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036599 has a single transcript. 2021-10-25 09:34:10.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036600: ['FBtr0075434'] 2021-10-25 09:34:10.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036600 has a single transcript. 2021-10-25 09:34:10.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036601: ['FBtr0075366'] 2021-10-25 09:34:10.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036601 has a single transcript. 2021-10-25 09:34:10.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036602: ['FBtr0075433'] 2021-10-25 09:34:10.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036602 has a single transcript. 2021-10-25 09:34:10.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036603: ['FBtr0303000'] 2021-10-25 09:34:10.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036603 has a single transcript. 2021-10-25 09:34:10.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028572: ['FBtr0079013', 'FBtr0079012', 'FBtr0100260', 'FBtr0100263', 'FBtr0100259', 'FBtr0302569', 'FBtr0339791', 'FBtr0339792', 'FBtr0332212', 'FBtr0332213', 'FBtr0332214', 'FBtr0332215'] 2021-10-25 09:34:10.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261610: ['FBtr0302921'] 2021-10-25 09:34:10.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261610 has a single transcript. 2021-10-25 09:34:10.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036605: ['FBtr0075432'] 2021-10-25 09:34:10.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036605 has a single transcript. 2021-10-25 09:34:10.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036606: ['FBtr0075370'] 2021-10-25 09:34:10.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036606 has a single transcript. 2021-10-25 09:34:10.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22247721, 22247782), (22247721, 22247795)] 2021-10-25 09:34:10.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036607: ['FBtr0075371'] 2021-10-25 09:34:10.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036607 has a single transcript. 2021-10-25 09:34:10.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261611: ['FBtr0302922', 'FBtr0302923', 'FBtr0332922', 'FBtr0332923', 'FBtr0332924', 'FBtr0345481', 'FBtr0345482', 'FBtr0345483'] 2021-10-25 09:34:10.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036608: ['FBtr0075431', 'FBtr0310461'] 2021-10-25 09:34:10.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061198: ['FBtr0072194', 'FBtr0343346'] 2021-10-25 09:34:10.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039928: ['FBtr0089207', 'FBtr0089208', 'FBtr0333700', 'FBtr0345193'] 2021-10-25 09:34:10.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16325691, 16325756), (16326234, 16326425)] 2021-10-25 09:34:10.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24028124, 24028613)] 2021-10-25 09:34:10.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003139: ['FBtr0070921', 'FBtr0331430', 'FBtr0331431', 'FBtr0331432'] 2021-10-25 09:34:10.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032988: ['FBtr0085955'] 2021-10-25 09:34:10.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032988 has a single transcript. 2021-10-25 09:34:10.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0032997: ['FBtr0299924'] 2021-10-25 09:34:10.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0032997 has a single transcript. 2021-10-25 09:34:10.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033000: ['FBtr0299923', 'FBtr0345361'] 2021-10-25 09:34:10.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036609: ['FBtr0075430'] 2021-10-25 09:34:10.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036609 has a single transcript. 2021-10-25 09:34:10.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036610: ['FBtr0075372'] 2021-10-25 09:34:10.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036610 has a single transcript. 2021-10-25 09:34:10.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036612: ['FBtr0075377', 'FBtr0110866'] 2021-10-25 09:34:10.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1115894, 1115955), (1115897, 1115955), (1116079, 1116325), (1116456, 1116514), (1116598, 1116659), (1117214, 1117850), (1117905, 1117967), (1119017, 1119936), (1120047, 1120105), (1120606, 1120658), (1120801, 1121458), (1121622, 1122827), (1121622, 1123222)] 2021-10-25 09:34:10.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061200: ['FBtr0074284', 'FBtr0340158', 'FBtr0299587'] 2021-10-25 09:34:10.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4829493, 4829546)] 2021-10-25 09:34:10.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.456 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6372187, 6372275), (6372563, 6372651), (6372828, 6372904), (6372828, 6372900), (6372851, 6372904)] 2021-10-25 09:34:10.457 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6372651, 6372915, 'FBtr0070921_exon_1') contains intron (6372828, 6372904) 2021-10-25 09:34:10.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070921_exon_1'] 2021-10-25 09:34:10.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.473 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12280498, 12295252), (12280498, 12296337), (12286283, 12296337), (12290879, 12292982), (12290879, 12293113), (12293600, 12296337), (12293600, 12295252), (12295414, 12296337), (12295669, 12296337), (12296465, 12296562), (12296806, 12296870), (12296985, 12297055), (12297197, 12297265), (12297339, 12297514)] 2021-10-25 09:34:10.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.477 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16339148, 16340435), (16342216, 16342604), (16342216, 16343793), (16343486, 16343793), (16344092, 16344157)] 2021-10-25 09:34:10.477 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.478 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16599639, 16599723), (16600313, 16600379), (16600895, 16600953), (16601198, 16601375), (16605786, 16605849), (16606008, 16606861), (16606008, 16607932), (16606999, 16607932), (16608000, 16609004)] 2021-10-25 09:34:10.499 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16599240, 16600313, 'FBtr0299587_exon_1') contains intron (16599639, 16599723) 2021-10-25 09:34:10.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299587_exon_1'] 2021-10-25 09:34:10.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033005: ['FBtr0086078', 'FBtr0086077', 'FBtr0111280', 'FBtr0345009'] 2021-10-25 09:34:10.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036614: ['FBtr0075428'] 2021-10-25 09:34:10.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036614 has a single transcript. 2021-10-25 09:34:10.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5060990, 5062740), (5063210, 5066869), (5064581, 5066869), (5066071, 5066869), (5066167, 5066869), (5067249, 5067308), (5068227, 5068295), (5068394, 5069126), (5068394, 5070096), (5069219, 5070096), (5070299, 5070352)] 2021-10-25 09:34:10.541 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0079013_exon_6') contains intron (5070299, 5070352) 2021-10-25 09:34:10.541 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0079012_exon_7') contains intron (5070299, 5070352) 2021-10-25 09:34:10.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070653, 'FBtr0100260_exon_7') contains intron (5070299, 5070352) 2021-10-25 09:34:10.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0100263_exon_5') contains intron (5070299, 5070352) 2021-10-25 09:34:10.542 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0100259_exon_6') contains intron (5070299, 5070352) 2021-10-25 09:34:10.543 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0332212_exon_6') contains intron (5070299, 5070352) 2021-10-25 09:34:10.543 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5070096, 5070750, 'FBtr0332215_exon_5') contains intron (5070299, 5070352) 2021-10-25 09:34:10.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079013_exon_6', 'FBtr0079012_exon_7', 'FBtr0100260_exon_7', 'FBtr0100263_exon_5', 'FBtr0100259_exon_6', 'FBtr0332212_exon_6', 'FBtr0332215_exon_5'] 2021-10-25 09:34:10.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036617: ['FBtr0075382'] 2021-10-25 09:34:10.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036617 has a single transcript. 2021-10-25 09:34:10.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036618: ['FBtr0075383'] 2021-10-25 09:34:10.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036618 has a single transcript. 2021-10-25 09:34:10.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036619: ['FBtr0075424'] 2021-10-25 09:34:10.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036619 has a single transcript. 2021-10-25 09:34:10.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039929: ['FBtr0089221', 'FBtr0344705', 'FBtr0344706'] 2021-10-25 09:34:10.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036620: ['FBtr0075384'] 2021-10-25 09:34:10.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036620 has a single transcript. 2021-10-25 09:34:10.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036621: ['FBtr0075423', 'FBtr0333265', 'FBtr0331173'] 2021-10-25 09:34:10.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061209: ['FBtr0085927'] 2021-10-25 09:34:10.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061209 has a single transcript. 2021-10-25 09:34:10.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003140: ['FBtr0086817', 'FBtr0344898'] 2021-10-25 09:34:10.600 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5090641, 5091871), (5090742, 5091871), (5091800, 5091871), (5092476, 5092526)] 2021-10-25 09:34:10.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061356: ['FBtr0100230'] 2021-10-25 09:34:10.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061356 has a single transcript. 2021-10-25 09:34:10.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061359: ['FBtr0091650', 'FBtr0333102'] 2021-10-25 09:34:10.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283525: ['FBtr0077959'] 2021-10-25 09:34:10.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283525 has a single transcript. 2021-10-25 09:34:10.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1030777, 1031594), (1030777, 1031551)] 2021-10-25 09:34:10.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:10.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283531: ['FBtr0300382', 'FBtr0335133'] 2021-10-25 09:34:10.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16374667, 16374859), (16377010, 16377075), (16377238, 16378431)] 2021-10-25 09:34:10.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:10.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.692 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2816470, 2816532), (2816661, 2816717), (2819574, 2819630), (2819908, 2819963), (2820367, 2820424), (2820629, 2820687), (2821037, 2821229), (2821310, 2827587), (2827995, 2830125), (2827995, 2830176)] 2021-10-25 09:34:10.693 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.693 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003141: ['FBtr0089395'] 2021-10-25 09:34:10.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003141 has a single transcript. 2021-10-25 09:34:10.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003145: ['FBtr0080299', 'FBtr0080298'] 2021-10-25 09:34:10.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061360: ['FBtr0091651'] 2021-10-25 09:34:10.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061360 has a single transcript. 2021-10-25 09:34:10.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061361: ['FBtr0091787'] 2021-10-25 09:34:10.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061361 has a single transcript. 2021-10-25 09:34:10.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039930: ['FBtr0089222'] 2021-10-25 09:34:10.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039930 has a single transcript. 2021-10-25 09:34:10.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061362: ['FBtr0091786'] 2021-10-25 09:34:10.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061362 has a single transcript. 2021-10-25 09:34:10.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039932: ['FBtr0301335', 'FBtr0301336', 'FBtr0334625'] 2021-10-25 09:34:10.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033010: ['FBtr0086081', 'FBtr0086079', 'FBtr0086080'] 2021-10-25 09:34:10.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12085088, 12085142), (12085088, 12085462)] 2021-10-25 09:34:10.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061435: ['FBtr0300124', 'FBtr0300125'] 2021-10-25 09:34:10.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283535: ['FBtr0078700', 'FBtr0078701', 'FBtr0346137'] 2021-10-25 09:34:10.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036622: ['FBtr0075421', 'FBtr0075422', 'FBtr0331172'] 2021-10-25 09:34:10.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261612: ['FBtr0302924', 'FBtr0302925'] 2021-10-25 09:34:10.794 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22784396, 22784462), (22784396, 22784452)] 2021-10-25 09:34:10.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5144858, 5148174), (5144858, 5148200), (5149156, 5152788)] 2021-10-25 09:34:10.814 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.814 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.814 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(962728, 963720), (964118, 964171), (965639, 968926), (965639, 972037), (969150, 969255), (972138, 972608), (972138, 978206), (972667, 975104), (975560, 975698), (975773, 975886)] 2021-10-25 09:34:10.815 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003149: ['FBtr0076594', 'FBtr0076595', 'FBtr0076596', 'FBtr0076593', 'FBtr0306639'] 2021-10-25 09:34:10.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16244082, 16244148), (16244299, 16244494), (16245160, 16246372), (16246912, 16247746), (16247909, 16248226), (16248478, 16249530), (16248478, 16254421), (16254920, 16255215), (16255431, 16259236)] 2021-10-25 09:34:10.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.823 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5591830, 5591928), (5592038, 5592567), (5592780, 5592858), (5593185, 5593246)] 2021-10-25 09:34:10.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5591762, 5592038, 'FBtr0078701_exon_1') contains intron (5591830, 5591928) 2021-10-25 09:34:10.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5591762, 5592038, 'FBtr0346137_exon_1') contains intron (5591830, 5591928) 2021-10-25 09:34:10.824 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078701_exon_1', 'FBtr0346137_exon_1'] 2021-10-25 09:34:10.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.831 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16379209, 16379269), (16379627, 16379699), (16380235, 16380470), (16380637, 16381297), (16380642, 16381128), (16380642, 16381297)] 2021-10-25 09:34:10.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.833 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061469: ['FBtr0076186'] 2021-10-25 09:34:10.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061469 has a single transcript. 2021-10-25 09:34:10.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061476: ['FBtr0085777'] 2021-10-25 09:34:10.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0061476 has a single transcript. 2021-10-25 09:34:10.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061492: ['FBtr0301446', 'FBtr0301447', 'FBtr0301448'] 2021-10-25 09:34:10.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261614: ['FBtr0302953'] 2021-10-25 09:34:10.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261614 has a single transcript. 2021-10-25 09:34:10.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261615: ['FBtr0302954'] 2021-10-25 09:34:10.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261615 has a single transcript. 2021-10-25 09:34:10.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261616: ['FBtr0345909', 'FBtr0302955'] 2021-10-25 09:34:10.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033015: ['FBtr0086082', 'FBtr0086083', 'FBtr0111115', 'FBtr0335258'] 2021-10-25 09:34:10.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039936: ['FBtr0300882', 'FBtr0300884', 'FBtr0300885', 'FBtr0300886'] 2021-10-25 09:34:10.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283536: ['FBtr0083804', 'FBtr0346100'] 2021-10-25 09:34:10.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8734130, 8734239), (8734855, 8737020), (8734855, 8739169), (8738087, 8738639), (8738747, 8738816), (8739282, 8739366), (8739494, 8739579), (8740451, 8742105), (8742272, 8742336), (8742423, 8744274), (8744331, 8744962)] 2021-10-25 09:34:10.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036623: ['FBtr0075417', 'FBtr0075418', 'FBtr0075419', 'FBtr0075420', 'FBtr0308819'] 2021-10-25 09:34:10.940 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6095017, 6095112), (6095017, 6095092), (6095343, 6095409), (6095487, 6095648), (6095912, 6095983), (6096151, 6096205)] 2021-10-25 09:34:10.941 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6094986, 6095343, 'FBtr0301446_exon_1') contains intron (6095017, 6095112) 2021-10-25 09:34:10.941 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301446_exon_1'] 2021-10-25 09:34:10.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7413963, 7414017)] 2021-10-25 09:34:10.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:10.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19643678, 19643737), (19643838, 19644205)] 2021-10-25 09:34:10.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:10.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5259224, 5259798), (5260171, 5263947), (5263995, 5294621), (5294712, 5294796), (5295057, 5295115), (5295060, 5295115), (5295063, 5295115)] 2021-10-25 09:34:11.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.004 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(853767, 855255), (855635, 855685), (855840, 860306), (860381, 860439), (861387, 861792), (864411, 865347), (865642, 865701), (865851, 865930), (865872, 865930), (866294, 866969), (866294, 866975)] 2021-10-25 09:34:11.005 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028573: ['FBtr0076064'] 2021-10-25 09:34:11.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028573 has a single transcript. 2021-10-25 09:34:11.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261617: ['FBtr0302722', 'FBtr0302723', 'FBtr0071402', 'FBtr0333521'] 2021-10-25 09:34:11.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028577: ['FBtr0072707', 'FBtr0072708', 'FBtr0072709', 'FBtr0072710', 'FBtr0300416', 'FBtr0300417', 'FBtr0300418', 'FBtr0300419', 'FBtr0300420', 'FBtr0301523'] 2021-10-25 09:34:11.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283545: ['FBtr0070486'] 2021-10-25 09:34:11.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283545 has a single transcript. 2021-10-25 09:34:11.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283625: ['FBtr0445675', 'FBtr0445676'] 2021-10-25 09:34:11.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16382157, 16382381), (16382739, 16383330), (16382739, 16382831), (16383866, 16383926), (16384113, 16384166), (16384113, 16384270), (16384113, 16385819), (16384113, 16385427)] 2021-10-25 09:34:11.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0061515: ['FBtr0075782', 'FBtr0075783', 'FBtr0304673', 'FBtr0304674', 'FBtr0333052', 'FBtr0333053'] 2021-10-25 09:34:11.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10354036, 10354105)] 2021-10-25 09:34:11.082 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10353367, 10354389, 'FBtr0445676_exon_1') contains intron (10354036, 10354105) 2021-10-25 09:34:11.082 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445676_exon_1'] 2021-10-25 09:34:11.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9670603, 9670841), (9672321, 9672399), (9672797, 9672859), (9673090, 9673163), (9673394, 9673494), (9674443, 9674813), (9674894, 9676511), (9674924, 9676511), (9676669, 9676756), (9677046, 9677114), (9681191, 9681273), (9681209, 9681273), (9681642, 9681754), (9682339, 9682551), (9684151, 9686978), (9684151, 9685502), (9684151, 9685549), (9684151, 9686638)] 2021-10-25 09:34:11.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003159: ['FBtr0070402', 'FBtr0070403', 'FBtr0070404', 'FBtr0307284', 'FBtr0307285', 'FBtr0343597'] 2021-10-25 09:34:11.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283626: ['FBtr0445677'] 2021-10-25 09:34:11.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283626 has a single transcript. 2021-10-25 09:34:11.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039937: ['FBtr0089251'] 2021-10-25 09:34:11.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039937 has a single transcript. 2021-10-25 09:34:11.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283627: ['FBtr0445678'] 2021-10-25 09:34:11.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283627 has a single transcript. 2021-10-25 09:34:11.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033017: ['FBtr0086094'] 2021-10-25 09:34:11.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033017 has a single transcript. 2021-10-25 09:34:11.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039938: ['FBtr0089252', 'FBtr0100600', 'FBtr0334488', 'FBtr0334489'] 2021-10-25 09:34:11.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283649: ['FBtr0075510', 'FBtr0333573'] 2021-10-25 09:34:11.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033019: ['FBtr0347209', 'FBtr0347210'] 2021-10-25 09:34:11.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14030420, 14030806), (14031002, 14031388), (14031002, 14031307), (14031057, 14031388), (14031230, 14031388)] 2021-10-25 09:34:11.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5350821, 5350879)] 2021-10-25 09:34:11.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15956839, 15956922), (15957065, 15957138), (15957583, 15957638), (15957804, 15957866)] 2021-10-25 09:34:11.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(802110, 802397), (803327, 807185), (803327, 803845), (803327, 823500), (803327, 806821), (806956, 807185), (823618, 827858), (827924, 833378)] 2021-10-25 09:34:11.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1498230, 1498292), (1498796, 1499042), (1499337, 1499771), (1499337, 1501345), (1499337, 1501798), (1499337, 1501350), (1499337, 1500244), (1499879, 1500244), (1499879, 1501798), (1500388, 1501350), (1500388, 1501169), (1500388, 1501798), (1501397, 1501798), (1501406, 1501798), (1501892, 1502466)] 2021-10-25 09:34:11.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036624: ['FBtr0075386', 'FBtr0075387', 'FBtr0333596'] 2021-10-25 09:34:11.240 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1499042, 1501892, 'FBtr0300416_exon_2') contains intron (1499337, 1499771) 2021-10-25 09:34:11.240 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1499042, 1501397, 'FBtr0300419_exon_3') contains intron (1499337, 1499771) 2021-10-25 09:34:11.240 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1499042, 1499879, 'FBtr0300420_exon_4') contains intron (1499337, 1499771) 2021-10-25 09:34:11.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300416_exon_2', 'FBtr0300419_exon_3', 'FBtr0300420_exon_4'] 2021-10-25 09:34:11.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033020: ['FBtr0086089', 'FBtr0335260'] 2021-10-25 09:34:11.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2348877, 2348944), (2349247, 2349341), (2349247, 2349326), (2349613, 2349780), (2349613, 2354186), (2349613, 2365905), (2349613, 2354706), (2349613, 2353703)] 2021-10-25 09:34:11.255 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283651: ['FBtr0445729', 'FBtr0445730', 'FBtr0445731', 'FBtr0445732'] 2021-10-25 09:34:11.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261618: ['FBtr0089682', 'FBtr0301180', 'FBtr0089680', 'FBtr0301181', 'FBtr0306388', 'FBtr0306389', 'FBtr0306390'] 2021-10-25 09:34:11.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5354045, 5354108), (5354108, 5354166)] 2021-10-25 09:34:11.289 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5354108, 5354723, 'FBtr0086089_exon_2') contains intron (5354108, 5354166) 2021-10-25 09:34:11.290 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5353993, 5354108, 'FBtr0335260_exon_1') contains intron (5354045, 5354108) 2021-10-25 09:34:11.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086089_exon_2', 'FBtr0335260_exon_1'] 2021-10-25 09:34:11.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16386494, 16386625), (16386570, 16386625), (16386570, 16386631), (16386956, 16387020), (16389348, 16389404), (16389620, 16389678), (16389877, 16389935), (16390184, 16390301)] 2021-10-25 09:34:11.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14104317, 14104475), (14105047, 14105107), (14105370, 14105469), (14106654, 14107251), (14106654, 14156861), (14135135, 14156861), (14157404, 14157528), (14157729, 14157833), (14158533, 14158647)] 2021-10-25 09:34:11.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033021: ['FBtr0086091', 'FBtr0086092'] 2021-10-25 09:34:11.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5360965, 5361018), (5361549, 5361598), (5362567, 5362627), (5362755, 5362829), (5362885, 5363062)] 2021-10-25 09:34:11.385 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5362829, 5363104, 'FBtr0086091_exon_1') contains intron (5362885, 5363062) 2021-10-25 09:34:11.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086091_exon_1'] 2021-10-25 09:34:11.385 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036627: ['FBtr0075388', 'FBtr0343534'] 2021-10-25 09:34:11.426 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28321279, 28321372), (28323486, 28323648), (28324649, 28324809), (28324877, 28325488), (28325819, 28326053), (28325819, 28328158), (28325819, 28330780), (28325819, 28333708), (28325819, 28326151), (28334707, 28335257), (28334707, 28335253), (28334707, 28336007)] 2021-10-25 09:34:11.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062411: ['FBtr0085749'] 2021-10-25 09:34:11.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062411 has a single transcript. 2021-10-25 09:34:11.427 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062412: ['FBtr0081835'] 2021-10-25 09:34:11.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062412 has a single transcript. 2021-10-25 09:34:11.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033027: ['FBtr0086075', 'FBtr0302019'] 2021-10-25 09:34:11.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062413: ['FBtr0070951', 'FBtr0308592', 'FBtr0308593', 'FBtr0308594'] 2021-10-25 09:34:11.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:11.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5503648, 5506237), (5506258, 5506312), (5506711, 5506760), (5506794, 5507683), (5507741, 5507844)] 2021-10-25 09:34:11.482 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5507683, 5507866, 'FBtr0086075_exon_1') contains intron (5507741, 5507844) 2021-10-25 09:34:11.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086075_exon_1'] 2021-10-25 09:34:11.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283652: ['FBtr0078143', 'FBtr0336990'] 2021-10-25 09:34:11.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003162: ['FBtr0071578', 'FBtr0071579', 'FBtr0071580'] 2021-10-25 09:34:11.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036629: ['FBtr0075411'] 2021-10-25 09:34:11.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036629 has a single transcript. 2021-10-25 09:34:11.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036638: ['FBtr0075400'] 2021-10-25 09:34:11.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036638 has a single transcript. 2021-10-25 09:34:11.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039941: ['FBtr0340047', 'FBtr0340048', 'FBtr0300806', 'FBtr0300807'] 2021-10-25 09:34:11.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036639: ['FBtr0075392'] 2021-10-25 09:34:11.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036639 has a single transcript. 2021-10-25 09:34:11.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033028: ['FBtr0086072', 'FBtr0345359'] 2021-10-25 09:34:11.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(251464, 251526), (251801, 251855), (251924, 251978), (252166, 252226)] 2021-10-25 09:34:11.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6661801, 6662239), (6661801, 6663663), (6661801, 6664999), (6662341, 6664999), (6663761, 6664999), (6665078, 6665161), (6665373, 6665438), (6665686, 6666239), (6665686, 6666849), (6666269, 6666849)] 2021-10-25 09:34:11.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036640: ['FBtr0089478', 'FBtr0089479', 'FBtr0331561'] 2021-10-25 09:34:11.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21175673, 21179937), (21179596, 21179937), (21179644, 21179937), (21180147, 21181419), (21181585, 21181644), (21181761, 21181835)] 2021-10-25 09:34:11.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5643535, 5643591), (5643718, 5643816), (5644041, 5647721), (5647824, 5652498)] 2021-10-25 09:34:11.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16577312, 16577382), (16578465, 16578575), (16578513, 16578575), (16578677, 16578736), (16578883, 16578945), (16579083, 16579135), (16579591, 16579651), (16579940, 16580160)] 2021-10-25 09:34:11.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283657: ['FBtr0112680', 'FBtr0299579', 'FBtr0299580', 'FBtr0299581', 'FBtr0299582', 'FBtr0299583', 'FBtr0301659', 'FBtr0070596', 'FBtr0333751', 'FBtr0333752', 'FBtr0333753', 'FBtr0345319'] 2021-10-25 09:34:11.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23068676, 23073103), (23068676, 23073106), (23071770, 23073103), (23073247, 23074762), (23075070, 23077857), (23078089, 23078159), (23078306, 23079805), (23078306, 23078769), (23079108, 23079805)] 2021-10-25 09:34:11.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028579: ['FBtr0086125'] 2021-10-25 09:34:11.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028579 has a single transcript. 2021-10-25 09:34:11.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028581: ['FBtr0303848'] 2021-10-25 09:34:11.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028581 has a single transcript. 2021-10-25 09:34:11.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033029: ['FBtr0086062', 'FBtr0331970'] 2021-10-25 09:34:11.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028582: ['FBtr0076798', 'FBtr0076794', 'FBtr0076795', 'FBtr0076796', 'FBtr0076797', 'FBtr0112941', 'FBtr0331833', 'FBtr0331834', 'FBtr0331835', 'FBtr0331836', 'FBtr0331837', 'FBtr0331838'] 2021-10-25 09:34:11.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003165: ['FBtr0081990', 'FBtr0081991', 'FBtr0081992', 'FBtr0081993', 'FBtr0081994', 'FBtr0305197', 'FBtr0333667', 'FBtr0333668'] 2021-10-25 09:34:11.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062440: ['FBtr0086781'] 2021-10-25 09:34:11.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062440 has a single transcript. 2021-10-25 09:34:11.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062442: ['FBtr0085405'] 2021-10-25 09:34:11.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062442 has a single transcript. 2021-10-25 09:34:11.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5657309, 5657371), (5657581, 5657642), (5658217, 5660600), (5660747, 5660806), (5661157, 5661218), (5661288, 5661358), (5662168, 5662226), (5662376, 5662455), (5662553, 5662618)] 2021-10-25 09:34:11.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062449: ['FBtr0088078', 'FBtr0345619'] 2021-10-25 09:34:11.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261624: ['FBtr0302971'] 2021-10-25 09:34:11.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261624 has a single transcript. 2021-10-25 09:34:11.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036641: ['FBtr0075395', 'FBtr0329921'] 2021-10-25 09:34:11.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261625: ['FBtr0344191', 'FBtr0302972', 'FBtr0302973', 'FBtr0302974', 'FBtr0302975', 'FBtr0302976', 'FBtr0302977', 'FBtr0302978', 'FBtr0302979', 'FBtr0339707'] 2021-10-25 09:34:11.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11691412, 11691499), (11691575, 11691967), (11692167, 11692498), (11692545, 11694473), (11694581, 11694654), (11694840, 11694917)] 2021-10-25 09:34:11.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033031: ['FBtr0086036'] 2021-10-25 09:34:11.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033031 has a single transcript. 2021-10-25 09:34:11.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16581387, 16581451)] 2021-10-25 09:34:11.743 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033032: ['FBtr0086037'] 2021-10-25 09:34:11.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033032 has a single transcript. 2021-10-25 09:34:11.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039942: ['FBtr0113727', 'FBtr0309316'] 2021-10-25 09:34:11.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033033: ['FBtr0086060', 'FBtr0086061'] 2021-10-25 09:34:11.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5678009, 5679226), (5679495, 5679557), (5679710, 5679765), (5680517, 5684803), (5684977, 5687675), (5688038, 5691651), (5688038, 5690787)] 2021-10-25 09:34:11.791 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.791 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036643: ['FBtr0075365'] 2021-10-25 09:34:11.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036643 has a single transcript. 2021-10-25 09:34:11.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062517: ['FBtr0072928'] 2021-10-25 09:34:11.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062517 has a single transcript. 2021-10-25 09:34:11.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036646: ['FBtr0301925'] 2021-10-25 09:34:11.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062565: ['FBtr0070003'] 2021-10-25 09:34:11.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23081856, 23081915), (23081859, 23081915), (23082002, 23082069)] 2021-10-25 09:34:11.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062565 has a single transcript. 2021-10-25 09:34:11.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036646 has a single transcript. 2021-10-25 09:34:11.803 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.803 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036648: ['FBtr0075361'] 2021-10-25 09:34:11.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036648 has a single transcript. 2021-10-25 09:34:11.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062928: ['FBtr0472921', 'FBtr0472922', 'FBtr0472923'] 2021-10-25 09:34:11.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036652: ['FBtr0075316'] 2021-10-25 09:34:11.817 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036652 has a single transcript. 2021-10-25 09:34:11.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036654: ['FBtr0075317', 'FBtr0344229'] 2021-10-25 09:34:11.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9071437, 9071506), (9071675, 9071751), (9073029, 9079744), (9079961, 9080557), (9081022, 9157117), (9081022, 9213759), (9081022, 9141319), (9081022, 9098695), (9098737, 9157117), (9141331, 9157117), (9213846, 9213976), (9214265, 9217986), (9218105, 9218198), (9218325, 9218521), (9218763, 9232073), (9218763, 9226220), (9232856, 9233528), (9234664, 9236809), (9234664, 9237614), (9234664, 9237616)] 2021-10-25 09:34:11.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033038: ['FBtr0086057'] 2021-10-25 09:34:11.857 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033038 has a single transcript. 2021-10-25 09:34:11.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039943: ['FBtr0113730'] 2021-10-25 09:34:11.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039943 has a single transcript. 2021-10-25 09:34:11.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033041: ['FBtr0086052'] 2021-10-25 09:34:11.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033041 has a single transcript. 2021-10-25 09:34:11.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033042: ['FBtr0086045', 'FBtr0335271'] 2021-10-25 09:34:11.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16705046, 16705113), (16705046, 16705109)] 2021-10-25 09:34:11.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19487106, 19487969), (19487106, 19487161), (19487249, 19487674), (19487249, 19487969), (19487767, 19487969)] 2021-10-25 09:34:11.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039944: ['FBtr0113723', 'FBtr0113724', 'FBtr0113725', 'FBtr0113726', 'FBtr0300041', 'FBtr0343932', 'FBtr0344446'] 2021-10-25 09:34:11.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3720104, 3721375), (3720322, 3721375), (3720513, 3721375), (3721647, 3781654), (3724871, 3781654), (3740204, 3781654), (3747411, 3749040), (3749094, 3762497), (3762857, 3781654), (3773034, 3781654), (3773034, 3775814), (3776437, 3781654), (3777360, 3781654), (3780689, 3781654), (3783559, 3783676), (3783559, 3784527), (3784441, 3784527), (3784706, 3785031), (3785224, 3785289), (3785495, 3785593), (3785813, 3786143)] 2021-10-25 09:34:11.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5796326, 5796384), (5796448, 5796509)] 2021-10-25 09:34:11.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036655: ['FBtr0075319'] 2021-10-25 09:34:11.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036655 has a single transcript. 2021-10-25 09:34:11.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036656: ['FBtr0299542', 'FBtr0345347'] 2021-10-25 09:34:11.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12671349, 12671556), (12671486, 12671534), (12672587, 12672663), (12673037, 12673099), (12673339, 12676124), (12673339, 12673898), (12673339, 12674990), (12673339, 12674205), (12673928, 12674990), (12673928, 12676124), (12676231, 12676343), (12676231, 12679207), (12676231, 12676502)] 2021-10-25 09:34:11.943 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12671074, 12672587, 'FBtr0302978_exon_5') contains intron (12671349, 12671556) 2021-10-25 09:34:11.943 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7529186, 7533354), (7529186, 7532671), (7529198, 7533354), (7532613, 7532671), (7532828, 7533354), (7533443, 7533506), (7534165, 7534234), (7534904, 7535043), (7535134, 7535195), (7535467, 7535542), (7535644, 7535883), (7535644, 7536975), (7535644, 7536710), (7535644, 7536003), (7536435, 7536975), (7536769, 7536975)] 2021-10-25 09:34:11.944 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12671074, 12672587, 'FBtr0339707_exon_5') contains intron (12671349, 12671556) 2021-10-25 09:34:11.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302978_exon_5', 'FBtr0339707_exon_5'] 2021-10-25 09:34:11.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.946 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033043: ['FBtr0086051'] 2021-10-25 09:34:11.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033043 has a single transcript. 2021-10-25 09:34:11.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033047: ['FBtr0085966', 'FBtr0335266'] 2021-10-25 09:34:11.985 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16726054, 16726115)] 2021-10-25 09:34:11.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:11.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:11.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062961: ['FBtr0091953'] 2021-10-25 09:34:11.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062961 has a single transcript. 2021-10-25 09:34:12.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0062978: ['FBtr0303445'] 2021-10-25 09:34:12.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0062978 has a single transcript. 2021-10-25 09:34:12.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063083: ['FBtr0091959'] 2021-10-25 09:34:12.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063083 has a single transcript. 2021-10-25 09:34:12.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5957962, 5958018), (5958129, 5958184), (5958943, 5959005), (5959218, 5959276), (5959379, 5959445)] 2021-10-25 09:34:12.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063127: ['FBtr0091948'] 2021-10-25 09:34:12.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063127 has a single transcript. 2021-10-25 09:34:12.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23087230, 23087303), (23087233, 23087303), (23087506, 23088714), (23090413, 23096612), (23090413, 23096432), (23090413, 23092214), (23090413, 23096706), (23090413, 23096461)] 2021-10-25 09:34:12.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063261: ['FBtr0083346'] 2021-10-25 09:34:12.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063261 has a single transcript. 2021-10-25 09:34:12.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036659: ['FBtr0075321'] 2021-10-25 09:34:12.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036659 has a single transcript. 2021-10-25 09:34:12.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063298: ['FBtr0309817', 'FBtr0309818', 'FBtr0309819'] 2021-10-25 09:34:12.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036660: ['FBtr0075346', 'FBtr0333610'] 2021-10-25 09:34:12.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033048: ['FBtr0086033', 'FBtr0345665'] 2021-10-25 09:34:12.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16778153, 16778214)] 2021-10-25 09:34:12.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9023415, 9023484), (9023415, 9023508), (9023415, 9023489)] 2021-10-25 09:34:12.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5961704, 5961957), (5963031, 5963093), (5963230, 5966690)] 2021-10-25 09:34:12.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036661: ['FBtr0075324', 'FBtr0075325', 'FBtr0333607'] 2021-10-25 09:34:12.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003169: ['FBtr0082977', 'FBtr0334030', 'FBtr0330227'] 2021-10-25 09:34:12.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033050: ['FBtr0085972', 'FBtr0335285'] 2021-10-25 09:34:12.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063368: ['FBtr0113776', 'FBtr0113777', 'FBtr0332975'] 2021-10-25 09:34:12.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16780420, 16780504), (16780790, 16781462), (16781585, 16781663)] 2021-10-25 09:34:12.224 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16780099, 16780790, 'FBtr0075325_exon_1') contains intron (16780420, 16780504) 2021-10-25 09:34:12.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075325_exon_1'] 2021-10-25 09:34:12.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6018208, 6018263), (6018355, 6018417), (6019253, 6019308), (6019393, 6019452), (6019549, 6019605)] 2021-10-25 09:34:12.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.252 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14621213, 14621273), (14622089, 14622157), (14622303, 14623242), (14623419, 14623486), (14623672, 14625199)] 2021-10-25 09:34:12.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.253 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.266 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082977': ['FBtr0330227']} 2021-10-25 09:34:12.266 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330227']] 2021-10-25 09:34:12.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23311800, 23311860), (23311800, 23311868)] 2021-10-25 09:34:12.276 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23311730, 23312464, 'FBtr0113776_exon_1') contains intron (23311800, 23311860) 2021-10-25 09:34:12.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113776_exon_1'] 2021-10-25 09:34:12.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033051: ['FBtr0086028', 'FBtr0335289'] 2021-10-25 09:34:12.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039945: ['FBtr0302542', 'FBtr0113717'] 2021-10-25 09:34:12.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036662: ['FBtr0075326', 'FBtr0075327'] 2021-10-25 09:34:12.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003174: ['FBtr0332461', 'FBtr0332462'] 2021-10-25 09:34:12.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6021411, 6021470), (6021882, 6021937)] 2021-10-25 09:34:12.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23087230, 23087303), (23087506, 23088714), (23090413, 23092214)] 2021-10-25 09:34:12.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261627: ['FBtr0302991'] 2021-10-25 09:34:12.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261627 has a single transcript. 2021-10-25 09:34:12.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16783245, 16783307), (16784712, 16784877)] 2021-10-25 09:34:12.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261628: ['FBtr0343646'] 2021-10-25 09:34:12.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261628 has a single transcript. 2021-10-25 09:34:12.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7282772, 7283563), (7283727, 7285668), (7286028, 7295850), (7297785, 7297851), (7298283, 7298350), (7298514, 7298634), (7298757, 7298816), (7299485, 7299684), (7299485, 7299687), (7299842, 7299909), (7299842, 7299906), (7300048, 7300201)] 2021-10-25 09:34:12.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7282571, 7283727, 'FBtr0332461_exon_1') contains intron (7282772, 7283563) 2021-10-25 09:34:12.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7295850, 7298283, 'FBtr0332461_exon_3') contains intron (7297785, 7297851) 2021-10-25 09:34:12.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332461_exon_1', 'FBtr0332461_exon_3'] 2021-10-25 09:34:12.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063373: ['FBtr0086857'] 2021-10-25 09:34:12.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063373 has a single transcript. 2021-10-25 09:34:12.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261630: ['FBtr0340258', 'FBtr0302995'] 2021-10-25 09:34:12.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063374: ['FBtr0086852'] 2021-10-25 09:34:12.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063374 has a single transcript. 2021-10-25 09:34:12.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063375: ['FBtr0086851'] 2021-10-25 09:34:12.386 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063375 has a single transcript. 2021-10-25 09:34:12.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063376: ['FBtr0086848'] 2021-10-25 09:34:12.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063376 has a single transcript. 2021-10-25 09:34:12.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039946: ['FBtr0301978'] 2021-10-25 09:34:12.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033052: ['FBtr0086027'] 2021-10-25 09:34:12.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039946 has a single transcript. 2021-10-25 09:34:12.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033052 has a single transcript. 2021-10-25 09:34:12.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063377: ['FBtr0086845'] 2021-10-25 09:34:12.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063377 has a single transcript. 2021-10-25 09:34:12.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033054: ['FBtr0086025', 'FBtr0086026', 'FBtr0302827', 'FBtr0302828'] 2021-10-25 09:34:12.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039955: ['FBtr0113989', 'FBtr0113990', 'FBtr0113991', 'FBtr0344573'] 2021-10-25 09:34:12.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063378: ['FBtr0086855'] 2021-10-25 09:34:12.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063378 has a single transcript. 2021-10-25 09:34:12.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028583: ['FBtr0077220'] 2021-10-25 09:34:12.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028583 has a single transcript. 2021-10-25 09:34:12.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8891585, 8891652)] 2021-10-25 09:34:12.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063379: ['FBtr0086854'] 2021-10-25 09:34:12.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063379 has a single transcript. 2021-10-25 09:34:12.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036663: ['FBtr0075341', 'FBtr0075344', 'FBtr0345074', 'FBtr0305915', 'FBtr0305916', 'FBtr0333608', 'FBtr0333609'] 2021-10-25 09:34:12.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003175: ['FBtr0071838', 'FBtr0112820', 'FBtr0331941', 'FBtr0331942'] 2021-10-25 09:34:12.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063380: ['FBtr0086853'] 2021-10-25 09:34:12.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063380 has a single transcript. 2021-10-25 09:34:12.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028622: ['FBtr0086258', 'FBtr0342704'] 2021-10-25 09:34:12.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063381: ['FBtr0086843'] 2021-10-25 09:34:12.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063381 has a single transcript. 2021-10-25 09:34:12.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283658: ['FBtr0079444', 'FBtr0079445', 'FBtr0332526', 'FBtr0332527', 'FBtr0332528', 'FBtr0332529'] 2021-10-25 09:34:12.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063382: ['FBtr0086849'] 2021-10-25 09:34:12.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063382 has a single transcript. 2021-10-25 09:34:12.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063383: ['FBtr0086847'] 2021-10-25 09:34:12.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063383 has a single transcript. 2021-10-25 09:34:12.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063384: ['FBtr0086846'] 2021-10-25 09:34:12.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063384 has a single transcript. 2021-10-25 09:34:12.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20563720, 20563793), (20564068, 20564129), (20564251, 20564322), (20564431, 20565000), (20565206, 20565277), (20565501, 20581560), (20581651, 20582029), (20581651, 20583349)] 2021-10-25 09:34:12.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063385: ['FBtr0086844'] 2021-10-25 09:34:12.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063385 has a single transcript. 2021-10-25 09:34:12.475 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261631: ['FBtr0302996'] 2021-10-25 09:34:12.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261631 has a single transcript. 2021-10-25 09:34:12.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063386: ['FBtr0086858'] 2021-10-25 09:34:12.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063386 has a single transcript. 2021-10-25 09:34:12.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261632: ['FBtr0347197'] 2021-10-25 09:34:12.488 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261632 has a single transcript. 2021-10-25 09:34:12.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6037404, 6037660), (6037761, 6037817), (6038010, 6038070), (6038407, 6040081), (6038446, 6040081), (6038446, 6040225), (6038446, 6040525)] 2021-10-25 09:34:12.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3846894, 3849502), (3846894, 3849498), (3846911, 3846980), (3846911, 3849498), (3847059, 3849502), (3850235, 3864291), (3864417, 3864465), (3864560, 3864612), (3865460, 3866006), (3867426, 3867499)] 2021-10-25 09:34:12.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063387: ['FBtr0086856'] 2021-10-25 09:34:12.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063387 has a single transcript. 2021-10-25 09:34:12.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261633: ['FBtr0302998'] 2021-10-25 09:34:12.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261633 has a single transcript. 2021-10-25 09:34:12.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261634: ['FBtr0302999'] 2021-10-25 09:34:12.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261634 has a single transcript. 2021-10-25 09:34:12.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063388: ['FBtr0086850'] 2021-10-25 09:34:12.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063388 has a single transcript. 2021-10-25 09:34:12.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261635: ['FBtr0303001'] 2021-10-25 09:34:12.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261635 has a single transcript. 2021-10-25 09:34:12.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063389: ['FBtr0079908'] 2021-10-25 09:34:12.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063389 has a single transcript. 2021-10-25 09:34:12.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261636: ['FBtr0344638'] 2021-10-25 09:34:12.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261636 has a single transcript. 2021-10-25 09:34:12.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063391: ['FBtr0079910'] 2021-10-25 09:34:12.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063391 has a single transcript. 2021-10-25 09:34:12.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22496398, 22497107), (22498805, 22498962), (22499736, 22534844), (22499736, 22512810), (22534920, 22534994), (22535136, 22535586), (22535805, 22535869), (22535994, 22536589), (22536782, 22536846), (22537122, 22537192), (22537326, 22540436), (22540696, 22540757), (22540977, 22555217), (22540977, 22543329), (22543718, 22546454), (22556794, 22560745), (22561142, 22561918), (22561142, 22561898)] 2021-10-25 09:34:12.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261638: ['FBtr0309069', 'FBtr0303008'] 2021-10-25 09:34:12.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063392: ['FBtr0079909'] 2021-10-25 09:34:12.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063392 has a single transcript. 2021-10-25 09:34:12.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028644: ['FBtr0080801', 'FBtr0343726', 'FBtr0343727'] 2021-10-25 09:34:12.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063449: ['FBtr0079906', 'FBtr0330683'] 2021-10-25 09:34:12.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6767276, 6779244), (6767276, 6775848), (6779284, 6779363)] 2021-10-25 09:34:12.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.583 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16788543, 16788661), (16789320, 16789458), (16790943, 16790998), (16791330, 16791390), (16791524, 16791580), (16791690, 16791818), (16791690, 16792440), (16792335, 16792440), (16792586, 16792648), (16793007, 16793075), (16793206, 16793273), (16794437, 16794498), (16794665, 16794836), (16794665, 16795250), (16794839, 16795250), (16796337, 16799044), (16799172, 16799483), (16799954, 16800071), (16799954, 16800092), (16799954, 16807532), (16799954, 16800100)] 2021-10-25 09:34:12.584 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16791580, 16792586, 'FBtr0345074_exon_9') contains intron (16791690, 16791818) 2021-10-25 09:34:12.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345074_exon_9'] 2021-10-25 09:34:12.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9893872, 9894063), (9894132, 9894330), (9894401, 9894575), (9894725, 9894979), (9894725, 9894942)] 2021-10-25 09:34:12.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7427361, 7428046), (7427773, 7427870), (7427944, 7428046), (7428216, 7428280), (7428610, 7428925), (7428610, 7428877), (7428679, 7428877), (7428679, 7428925), (7429104, 7429166), (7429515, 7429581), (7429684, 7429742)] 2021-10-25 09:34:12.600 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.600 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16001254, 16013952), (16014288, 16032379), (16032591, 16034187), (16034323, 16034579), (16034713, 16037140), (16037263, 16037336), (16037526, 16038874)] 2021-10-25 09:34:12.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261639: ['FBtr0303009'] 2021-10-25 09:34:12.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261639 has a single transcript. 2021-10-25 09:34:12.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033055: ['FBtr0085974', 'FBtr0335286'] 2021-10-25 09:34:12.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261640: ['FBtr0303010'] 2021-10-25 09:34:12.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261640 has a single transcript. 2021-10-25 09:34:12.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039958: ['FBtr0113704', 'FBtr0113705', 'FBtr0300702', 'FBtr0300703', 'FBtr0300704', 'FBtr0344847'] 2021-10-25 09:34:12.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063485: ['FBtr0100145', 'FBtr0075350', 'FBtr0306151', 'FBtr0306152'] 2021-10-25 09:34:12.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261641: ['FBtr0345075', 'FBtr0345076', 'FBtr0303013', 'FBtr0303014', 'FBtr0303015', 'FBtr0303017', 'FBtr0334545'] 2021-10-25 09:34:12.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003187: ['FBtr0080996', 'FBtr0080997', 'FBtr0306165'] 2021-10-25 09:34:12.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6042649, 6042708), (6043023, 6043092), (6043565, 6043614), (6044038, 6044095), (6044378, 6044433)] 2021-10-25 09:34:12.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028645: ['FBtr0080808', 'FBtr0300615'] 2021-10-25 09:34:12.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033056: ['FBtr0086024'] 2021-10-25 09:34:12.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033056 has a single transcript. 2021-10-25 09:34:12.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17487074, 17487139), (17487337, 17487401), (17488400, 17488456), (17489369, 17489430), (17489381, 17489430), (17489633, 17489692), (17489902, 17491801), (17489902, 17496734)] 2021-10-25 09:34:12.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16678358, 16678424), (16678660, 16680811), (16678660, 16678807), (16679473, 16680811), (16679869, 16680811), (16679932, 16680811), (16680947, 16681237), (16681370, 16694201), (16694296, 16710942)] 2021-10-25 09:34:12.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033058: ['FBtr0085975', 'FBtr0301687'] 2021-10-25 09:34:12.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15905813, 15906317), (15906489, 15906548), (15906805, 15906863), (15906999, 15908066), (15908278, 15939363), (15940082, 15962000), (15940082, 15962008)] 2021-10-25 09:34:12.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.775 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23162139, 23162211), (23162862, 23162924), (23162872, 23162924), (23163058, 23174412), (23163058, 23173891), (23163058, 23174061)] 2021-10-25 09:34:12.776 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23162211, 23163058, 'FBtr0300703_exon_2') contains intron (23162862, 23162924) 2021-10-25 09:34:12.776 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300703_exon_2'] 2021-10-25 09:34:12.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6051363, 6062579), (6063197, 6064623), (6064843, 6064903), (6065070, 6065874), (6066068, 6066173), (6066294, 6067299), (6067710, 6068506)] 2021-10-25 09:34:12.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.805 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6361911, 6362004), (6362334, 6362398), (6362763, 6362837), (6363230, 6364161), (6363230, 6365003), (6364438, 6364555), (6364725, 6365003), (6365154, 6365953), (6366287, 6366347), (6367831, 6367897)] 2021-10-25 09:34:12.806 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6364161, 6364725, 'FBtr0345075_exon_5') contains intron (6364438, 6364555) 2021-10-25 09:34:12.806 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6362837, 6364438, 'FBtr0345076_exon_5') contains intron (6363230, 6364161) 2021-10-25 09:34:12.807 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6364555, 6365154, 'FBtr0345076_exon_4') contains intron (6364725, 6365003) 2021-10-25 09:34:12.808 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345075_exon_5', 'FBtr0345076_exon_5', 'FBtr0345076_exon_4'] 2021-10-25 09:34:12.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028646: ['FBtr0085694', 'FBtr0085695', 'FBtr0085692', 'FBtr0085693', 'FBtr0330290', 'FBtr0306586'] 2021-10-25 09:34:12.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283659: ['FBtr0080727', 'FBtr0303561'] 2021-10-25 09:34:12.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003189: ['FBtr0089734', 'FBtr0340155', 'FBtr0340156'] 2021-10-25 09:34:12.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033060: ['FBtr0085977'] 2021-10-25 09:34:12.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033060 has a single transcript. 2021-10-25 09:34:12.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033061: ['FBtr0086022'] 2021-10-25 09:34:12.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033061 has a single transcript. 2021-10-25 09:34:12.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033062: ['FBtr0086020', 'FBtr0086021', 'FBtr0086018', 'FBtr0310665', 'FBtr0310666', 'FBtr0310667'] 2021-10-25 09:34:12.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036665: ['FBtr0273320', 'FBtr0305913'] 2021-10-25 09:34:12.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15009394, 15009449), (15009598, 15009703)] 2021-10-25 09:34:12.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063491: ['FBtr0086677'] 2021-10-25 09:34:12.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063491 has a single transcript. 2021-10-25 09:34:12.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16655609, 16656384), (16656159, 16656384), (16657156, 16657220), (16660472, 16660537), (16660642, 16665187), (16665327, 16666034), (16667859, 16667936), (16668320, 16668384)] 2021-10-25 09:34:12.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063492: ['FBtr0086676', 'FBtr0345798'] 2021-10-25 09:34:12.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16810024, 16810083), (16810489, 16810594), (16810867, 16828470), (16810867, 16811677)] 2021-10-25 09:34:12.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283666: ['FBtr0072177', 'FBtr0343334', 'FBtr0343335'] 2021-10-25 09:34:12.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30446503, 30446563), (30447173, 30447229), (30447348, 30447411), (30447578, 30447752), (30447578, 30448345), (30447788, 30448345), (30448569, 30448634), (30448829, 30448895), (30448987, 30449045), (30449208, 30449806), (30449959, 30453427), (30449959, 30450228), (30449959, 30455650)] 2021-10-25 09:34:12.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:12.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:12.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:12.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036666: ['FBtr0075329'] 2021-10-25 09:34:12.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036666 has a single transcript. 2021-10-25 09:34:12.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036667: ['FBtr0075339', 'FBtr0305272'] 2021-10-25 09:34:12.983 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085694': ['FBtr0330290']} 2021-10-25 09:34:12.984 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330290']] 2021-10-25 09:34:12.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039959: ['FBtr0113748', 'FBtr0334934'] 2021-10-25 09:34:13.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6081034, 6081735), (6081415, 6081735), (6081840, 6081911), (6083884, 6083940), (6084007, 6084507), (6084007, 6084168), (6084390, 6084507), (6084787, 6084846), (6085019, 6085085), (6085031, 6085085), (6085230, 6085549), (6085230, 6085281)] 2021-10-25 09:34:13.007 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6085085, 6085436, 'FBtr0086020_exon_1') contains intron (6085230, 6085281) 2021-10-25 09:34:13.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086020_exon_1'] 2021-10-25 09:34:13.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.015 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24063573, 24064733), (24064229, 24064733), (24064657, 24064733), (24064871, 24064992), (24065110, 24065182)] 2021-10-25 09:34:13.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.016 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16844862, 16844941), (16844862, 16844919)] 2021-10-25 09:34:13.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003204: ['FBtr0071494', 'FBtr0071495', 'FBtr0343043', 'FBtr0332294'] 2021-10-25 09:34:13.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063493: ['FBtr0086675'] 2021-10-25 09:34:13.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063493 has a single transcript. 2021-10-25 09:34:13.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063494: ['FBtr0086674'] 2021-10-25 09:34:13.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063494 has a single transcript. 2021-10-25 09:34:13.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063495: ['FBtr0086673'] 2021-10-25 09:34:13.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063495 has a single transcript. 2021-10-25 09:34:13.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27974140, 27987737), (27988702, 28012380), (28011717, 28012380), (28012483, 28012536)] 2021-10-25 09:34:13.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063496: ['FBtr0086672'] 2021-10-25 09:34:13.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063496 has a single transcript. 2021-10-25 09:34:13.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063497: ['FBtr0086671'] 2021-10-25 09:34:13.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063497 has a single transcript. 2021-10-25 09:34:13.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063498: ['FBtr0086670'] 2021-10-25 09:34:13.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063498 has a single transcript. 2021-10-25 09:34:13.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063499: ['FBtr0086726', 'FBtr0344195'] 2021-10-25 09:34:13.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036668: ['FBtr0075330'] 2021-10-25 09:34:13.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036668 has a single transcript. 2021-10-25 09:34:13.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036670: ['FBtr0075336', 'FBtr0332702'] 2021-10-25 09:34:13.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261647: ['FBtr0077763', 'FBtr0077762', 'FBtr0330665', 'FBtr0330666'] 2021-10-25 09:34:13.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039965: ['FBtr0111191', 'FBtr0111192', 'FBtr0344110'] 2021-10-25 09:34:13.111 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10744661, 10745677), (10745489, 10745771), (10745489, 10745677), (10745983, 10746075), (10746226, 10746420), (10747072, 10747485), (10748026, 10748097)] 2021-10-25 09:34:13.112 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.112 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18397568, 18397618), (18397801, 18398499)] 2021-10-25 09:34:13.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283678: ['FBtr0080214'] 2021-10-25 09:34:13.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283678 has a single transcript. 2021-10-25 09:34:13.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16861041, 16861153), (16861251, 16861309)] 2021-10-25 09:34:13.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283680: ['FBtr0344168', 'FBtr0344169', 'FBtr0344170', 'FBtr0344171', 'FBtr0346133', 'FBtr0346134'] 2021-10-25 09:34:13.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028647: ['FBtr0300735'] 2021-10-25 09:34:13.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028647 has a single transcript. 2021-10-25 09:34:13.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028648: ['FBtr0076891'] 2021-10-25 09:34:13.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028648 has a single transcript. 2021-10-25 09:34:13.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028658: ['FBtr0080573', 'FBtr0331627'] 2021-10-25 09:34:13.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063649: ['FBtr0083252', 'FBtr0113477', 'FBtr0309301', 'FBtr0309302', 'FBtr0309303'] 2021-10-25 09:34:13.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23013681, 23013818), (23014108, 23014452)] 2021-10-25 09:34:13.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036671: ['FBtr0075337'] 2021-10-25 09:34:13.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036671 has a single transcript. 2021-10-25 09:34:13.179 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2365390, 2366274), (2365728, 2366274), (2365901, 2366274), (2368213, 2368315)] 2021-10-25 09:34:13.187 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036676: ['FBtr0075261'] 2021-10-25 09:34:13.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036676 has a single transcript. 2021-10-25 09:34:13.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036677: ['FBtr0075307', 'FBtr0345805'] 2021-10-25 09:34:13.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13808964, 13809019), (13810521, 13810578)] 2021-10-25 09:34:13.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033063: ['FBtr0085978', 'FBtr0304730', 'FBtr0332948'] 2021-10-25 09:34:13.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16924862, 16924918), (16925985, 16927234)] 2021-10-25 09:34:13.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003205: ['FBtr0082122'] 2021-10-25 09:34:13.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003205 has a single transcript. 2021-10-25 09:34:13.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028662: ['FBtr0083005', 'FBtr0308030'] 2021-10-25 09:34:13.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003206: ['FBtr0073212'] 2021-10-25 09:34:13.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003206 has a single transcript. 2021-10-25 09:34:13.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13303808, 13318414), (13306947, 13327347), (13315273, 13315367), (13315392, 13318414), (13315396, 13318414), (13319047, 13327347), (13321354, 13325771), (13321478, 13325771), (13326855, 13327347), (13327597, 13327665), (13327934, 13328150), (13328261, 13328387)] 2021-10-25 09:34:13.277 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13315021, 13315396, 'FBtr0344169_exon_1') contains intron (13315273, 13315367) 2021-10-25 09:34:13.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344169_exon_1'] 2021-10-25 09:34:13.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039966: ['FBtr0111134', 'FBtr0336924', 'FBtr0299903'] 2021-10-25 09:34:13.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16155619, 16166535), (16158239, 16158857), (16158295, 16158857), (16158306, 16158857), (16158313, 16158857), (16159204, 16166535), (16166954, 16167018), (16167265, 16167940), (16168208, 16168415), (16168707, 16169694), (16170021, 16170088), (16170036, 16170088)] 2021-10-25 09:34:13.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003209: ['FBtr0079745', 'FBtr0079746', 'FBtr0340231', 'FBtr0340232', 'FBtr0303868'] 2021-10-25 09:34:13.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6137699, 6137988), (6137813, 6137988), (6138260, 6138317), (6138265, 6138317)] 2021-10-25 09:34:13.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036678: ['FBtr0075303', 'FBtr0075300', 'FBtr0075301', 'FBtr0075302', 'FBtr0075304', 'FBtr0075305', 'FBtr0075306', 'FBtr0113173', 'FBtr0113174', 'FBtr0305577'] 2021-10-25 09:34:13.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14902890, 14903211), (14903887, 14903950), (14903891, 14903950)] 2021-10-25 09:34:13.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261648: ['FBtr0343619', 'FBtr0089913'] 2021-10-25 09:34:13.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23012981, 23013042), (23013135, 23013294)] 2021-10-25 09:34:13.344 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23012139, 23013216, 'FBtr0111134_exon_1') contains intron (23012981, 23013042) 2021-10-25 09:34:13.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111134_exon_1'] 2021-10-25 09:34:13.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.367 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11435924, 11436215), (11435924, 11436211), (11436292, 11436415), (11440251, 11445027)] 2021-10-25 09:34:13.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028663: ['FBtr0078369', 'FBtr0333454'] 2021-10-25 09:34:13.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033065: ['FBtr0085987', 'FBtr0345485'] 2021-10-25 09:34:13.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8710590, 8710726), (8711637, 8711700), (8712080, 8712144), (8712303, 8712387), (8712602, 8712673), (8713019, 8713088), (8713203, 8713263), (8713370, 8740384), (8713370, 8714123), (8713370, 8734466), (8735200, 8735721), (8735200, 8740384)] 2021-10-25 09:34:13.399 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8734466, 8735797, 'FBtr0340232_exon_1') contains intron (8735200, 8735721) 2021-10-25 09:34:13.399 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340232_exon_1'] 2021-10-25 09:34:13.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21540082, 21540152), (21540200, 21540268)] 2021-10-25 09:34:13.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261649: ['FBtr0089772', 'FBtr0089771', 'FBtr0304905', 'FBtr0337038', 'FBtr0337039'] 2021-10-25 09:34:13.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6174171, 6174291)] 2021-10-25 09:34:13.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039969: ['FBtr0086073', 'FBtr0273208', 'FBtr0273209', 'FBtr0273210', 'FBtr0273211', 'FBtr0345012'] 2021-10-25 09:34:13.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028664: ['FBtr0073256'] 2021-10-25 09:34:13.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028664 has a single transcript. 2021-10-25 09:34:13.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028667: ['FBtr0076090', 'FBtr0302359'] 2021-10-25 09:34:13.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063667: ['FBtr0273416'] 2021-10-25 09:34:13.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063667 has a single transcript. 2021-10-25 09:34:13.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033067: ['FBtr0086005'] 2021-10-25 09:34:13.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063670: ['FBtr0113841', 'FBtr0333870', 'FBtr0333871', 'FBtr0333872'] 2021-10-25 09:34:13.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033067 has a single transcript. 2021-10-25 09:34:13.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033069: ['FBtr0085990'] 2021-10-25 09:34:13.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033069 has a single transcript. 2021-10-25 09:34:13.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033072: ['FBtr0086001'] 2021-10-25 09:34:13.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033072 has a single transcript. 2021-10-25 09:34:13.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033074: ['FBtr0085994'] 2021-10-25 09:34:13.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033074 has a single transcript. 2021-10-25 09:34:13.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283681: ['FBtr0075381'] 2021-10-25 09:34:13.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0283681 has a single transcript. 2021-10-25 09:34:13.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11473345, 11473394)] 2021-10-25 09:34:13.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16928956, 16929021), (16929707, 16933292), (16929710, 16933292), (16930981, 16933292), (16933011, 16933292), (16933360, 16935193), (16935305, 16935456), (16935305, 16935487), (16935305, 16935364)] 2021-10-25 09:34:13.586 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16935193, 16935536, 'FBtr0075304_exon_1') contains intron (16935305, 16935456) 2021-10-25 09:34:13.586 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16935193, 16935536, 'FBtr0075305_exon_1') contains intron (16935305, 16935456) 2021-10-25 09:34:13.587 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16935193, 16935536, 'FBtr0075306_exon_1') contains intron (16935305, 16935456) 2021-10-25 09:34:13.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075304_exon_1', 'FBtr0075305_exon_1', 'FBtr0075306_exon_1'] 2021-10-25 09:34:13.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283682: ['FBtr0080231', 'FBtr0080232'] 2021-10-25 09:34:13.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033075: ['FBtr0085996', 'FBtr0085995', 'FBtr0085997', 'FBtr0085999', 'FBtr0114492', 'FBtr0336520'] 2021-10-25 09:34:13.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17811714, 17813530), (17811804, 17836150), (17811804, 17813530), (17811804, 17821893), (17813617, 17836150), (17821938, 17836150), (17836236, 17851985), (17852683, 17853014), (17853130, 17857786), (17858021, 17864369), (17866196, 17866881), (17867295, 17868485), (17867350, 17868485), (17869224, 17869925)] 2021-10-25 09:34:13.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5603761, 5603899), (5604012, 5604243), (5604411, 5604467), (5604411, 5604516), (5604516, 5604709), (5604516, 5604582), (5604650, 5604709)] 2021-10-25 09:34:13.629 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5604516, 5604834, 'FBtr0273211_exon_1') contains intron (5604516, 5604709) 2021-10-25 09:34:13.629 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5604516, 5604617, 'FBtr0345012_exon_1') contains intron (5604516, 5604582) 2021-10-25 09:34:13.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273211_exon_1', 'FBtr0345012_exon_1'] 2021-10-25 09:34:13.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11095877, 11095952), (11096475, 11096535), (11096701, 11096764), (11097005, 11097061), (11097299, 11097407), (11098984, 11099041), (11099295, 11099353), (11099754, 11100016), (11100225, 11100293), (11100574, 11100657)] 2021-10-25 09:34:13.633 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11100293, 11100888, 'FBtr0080232_exon_1') contains intron (11100574, 11100657) 2021-10-25 09:34:13.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080232_exon_1'] 2021-10-25 09:34:13.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028668: ['FBtr0076091'] 2021-10-25 09:34:13.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028668 has a single transcript. 2021-10-25 09:34:13.637 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27083593, 27083738), (27083593, 27083723), (27083593, 27083736)] 2021-10-25 09:34:13.638 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028669: ['FBtr0086602'] 2021-10-25 09:34:13.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028669 has a single transcript. 2021-10-25 09:34:13.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028670: ['FBtr0083656', 'FBtr0083657'] 2021-10-25 09:34:13.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003210: ['FBtr0070702', 'FBtr0343568', 'FBtr0332290'] 2021-10-25 09:34:13.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283712: ['FBtr0073659', 'FBtr0073660', 'FBtr0073661', 'FBtr0301830', 'FBtr0301831'] 2021-10-25 09:34:13.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18390890, 18390961), (18391196, 18391258), (18391517, 18391577), (18393205, 18393271), (18393409, 18396712), (18393409, 18398991)] 2021-10-25 09:34:13.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.718 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6242100, 6242621), (6242719, 6249411), (6242752, 6249411), (6245577, 6246263), (6245577, 6249411), (6246584, 6249411), (6250018, 6250338), (6250852, 6251075), (6250852, 6251129), (6251852, 6251937), (6253172, 6253229), (6253355, 6253607), (6253945, 6254009), (6254254, 6254844)] 2021-10-25 09:34:13.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6242003, 6242719, 'FBtr0085995_exon_1') contains intron (6242100, 6242621) 2021-10-25 09:34:13.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085995_exon_1'] 2021-10-25 09:34:13.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4535961, 4536531), (4537431, 4537485), (4538709, 4538774), (4539603, 4539663)] 2021-10-25 09:34:13.725 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4535634, 4537431, 'FBtr0070702_exon_4') contains intron (4535961, 4536531) 2021-10-25 09:34:13.726 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070702_exon_4'] 2021-10-25 09:34:13.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063923: ['FBtr0072488', 'FBtr0100851', 'FBtr0100224', 'FBtr0072493'] 2021-10-25 09:34:13.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028671: ['FBtr0085374', 'FBtr0085375', 'FBtr0085376', 'FBtr0085377', 'FBtr0085379', 'FBtr0085380', 'FBtr0085381', 'FBtr0335405', 'FBtr0301650', 'FBtr0301651'] 2021-10-25 09:34:13.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261671: ['FBtr0340172', 'FBtr0340173', 'FBtr0304927', 'FBtr0304928', 'FBtr0304929', 'FBtr0304930'] 2021-10-25 09:34:13.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12586249, 12586309), (12587900, 12587969), (12589167, 12589523), (12589167, 12589255), (12589167, 12589840), (12589321, 12589840), (12590484, 12591930), (12590484, 12591967)] 2021-10-25 09:34:13.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003218: ['FBtr0100194', 'FBtr0100195', 'FBtr0073823', 'FBtr0073822', 'FBtr0301532', 'FBtr0301533', 'FBtr0301534', 'FBtr0301535', 'FBtr0340289', 'FBtr0331716', 'FBtr0331717'] 2021-10-25 09:34:13.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039970: ['FBtr0086071', 'FBtr0307172'] 2021-10-25 09:34:13.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(216706, 216760), (217109, 217219), (217442, 217490), (217775, 217854)] 2021-10-25 09:34:13.906 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (217490, 218058, 'FBtr0100224_exon_2') contains intron (217775, 217854) 2021-10-25 09:34:13.906 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (216691, 217109, 'FBtr0072493_exon_1') contains intron (216706, 216760) 2021-10-25 09:34:13.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100224_exon_2', 'FBtr0072493_exon_1'] 2021-10-25 09:34:13.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5608797, 5609012), (5609489, 5610063), (5610256, 5611191)] 2021-10-25 09:34:13.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033076: ['FBtr0305958'] 2021-10-25 09:34:13.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033076 has a single transcript. 2021-10-25 09:34:13.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033079: ['FBtr0086148'] 2021-10-25 09:34:13.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033079 has a single transcript. 2021-10-25 09:34:13.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16889125, 16891457), (16891737, 16891792), (16894943, 16895000), (16895204, 16895286), (16895830, 16895890), (16896171, 16896236), (16896357, 16896808), (16896357, 16897487), (16896904, 16897487), (16898068, 16902527), (16902864, 16902931), (16904131, 16904236), (16904143, 16904236), (16904401, 16904459), (16904610, 16905298), (16904661, 16905298), (16904712, 16905298), (16905389, 16905490), (16905389, 16905550), (16905594, 16905659), (16906315, 16906380), (16906513, 16906576), (16907438, 16907507), (16908123, 16910671), (16911640, 16911703), (16915355, 16915420), (16915621, 16915671), (16915621, 16915689), (16915820, 16915880)] 2021-10-25 09:34:13.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:13.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:13.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033081: ['FBtr0086147', 'FBtr0336665'] 2021-10-25 09:34:13.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039972: ['FBtr0085956', 'FBtr0085957', 'FBtr0085958', 'FBtr0306235', 'FBtr0306236'] 2021-10-25 09:34:14.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036679: ['FBtr0273313'] 2021-10-25 09:34:14.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036679 has a single transcript. 2021-10-25 09:34:14.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6656454, 6656525)] 2021-10-25 09:34:14.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036680: ['FBtr0113176', 'FBtr0347065'] 2021-10-25 09:34:14.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29131271, 29131685), (29131447, 29131685), (29131825, 29132125), (29132302, 29132375), (29132504, 29133860), (29132504, 29133271), (29132504, 29133337), (29133429, 29135048), (29133961, 29135048), (29133961, 29134556), (29134598, 29135048), (29135175, 29135261), (29136417, 29136481), (29136699, 29137075), (29136699, 29136904), (29136910, 29137075), (29137286, 29137351), (29137523, 29137583)] 2021-10-25 09:34:14.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0063924: ['FBtr0304146'] 2021-10-25 09:34:14.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0063924 has a single transcript. 2021-10-25 09:34:14.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064115: ['FBtr0091626'] 2021-10-25 09:34:14.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064115 has a single transcript. 2021-10-25 09:34:14.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283724: ['FBtr0073035', 'FBtr0073036', 'FBtr0332097', 'FBtr0332098', 'FBtr0332099'] 2021-10-25 09:34:14.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064116: ['FBtr0077227', 'FBtr0091702'] 2021-10-25 09:34:14.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16940583, 16940635), (16940817, 16941600), (16941738, 16955325), (16941738, 16942595), (16955532, 16957024)] 2021-10-25 09:34:14.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033085: ['FBtr0086114'] 2021-10-25 09:34:14.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033085 has a single transcript. 2021-10-25 09:34:14.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033086: ['FBtr0086115', 'FBtr0086116', 'FBtr0330253'] 2021-10-25 09:34:14.111 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13762830, 13767786), (13762868, 13763068), (13762868, 13767786), (13762945, 13767786), (13763088, 13767786), (13763111, 13767786), (13768157, 13768658), (13768803, 13768868), (13769060, 13769143), (13769554, 13769810), (13770142, 13770765), (13770142, 13771127), (13770804, 13771127), (13771203, 13771276), (13772485, 13772557), (13772656, 13772785), (13772695, 13772785), (13773753, 13773805), (13773978, 13776675), (13773978, 13774685), (13773978, 13775432), (13773978, 13775972), (13776380, 13776675)] 2021-10-25 09:34:14.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13773805, 13775189, 'FBtr0301532_exon_11') contains intron (13773978, 13774685) 2021-10-25 09:34:14.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301532_exon_11'] 2021-10-25 09:34:14.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21319140, 21319222)] 2021-10-25 09:34:14.117 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.117 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22308846, 22308900), (22309001, 22311864), (22312038, 22354811), (22312038, 22325761), (22312038, 22363429), (22325846, 22363429), (22325846, 22356902), (22354401, 22354465), (22354969, 22363429), (22357047, 22363429), (22364294, 22365192), (22365324, 22365376), (22367173, 22367235), (22367497, 22367565), (22368176, 22368245)] 2021-10-25 09:34:14.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036681: ['FBtr0113177', 'FBtr0445839'] 2021-10-25 09:34:14.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6669224, 6669329), (6669232, 6669329), (6669434, 6669491)] 2021-10-25 09:34:14.168 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6669089, 6669434, 'FBtr0086116_exon_1') contains intron (6669224, 6669329) 2021-10-25 09:34:14.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086116_exon_1'] 2021-10-25 09:34:14.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064117: ['FBtr0091703', 'FBtr0091704'] 2021-10-25 09:34:14.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3179421, 3179943), (3180680, 3180741), (3181020, 3181085), (3183144, 3183199), (3183438, 3183498), (3183574, 3183635), (3183799, 3184248), (3183799, 3183932), (3183997, 3184251), (3183997, 3184248), (3184037, 3184251), (3184037, 3184248)] 2021-10-25 09:34:14.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16944603, 16944662), (16944937, 16945554), (16945779, 16954879)] 2021-10-25 09:34:14.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21319140, 21319222)] 2021-10-25 09:34:14.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036684: ['FBtr0075297', 'FBtr0321285', 'FBtr0332122'] 2021-10-25 09:34:14.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261673: ['FBtr0087868', 'FBtr0302151', 'FBtr0087867', 'FBtr0087869', 'FBtr0087870', 'FBtr0339740', 'FBtr0339741', 'FBtr0339742'] 2021-10-25 09:34:14.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033087: ['FBtr0086145', 'FBtr0302190'] 2021-10-25 09:34:14.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064119: ['FBtr0300808', 'FBtr0300809', 'FBtr0301700'] 2021-10-25 09:34:14.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039977: ['FBtr0299868', 'FBtr0333911'] 2021-10-25 09:34:14.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6671398, 6671507), (6672886, 6672948), (6672886, 6672942)] 2021-10-25 09:34:14.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16995615, 16995676), (16995946, 16996014), (16998184, 16998269), (16998457, 16998524), (16999547, 16999738), (17000012, 17001515), (17000012, 17011388), (17001644, 17002221), (17001747, 17002221)] 2021-10-25 09:34:14.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20042876, 20042934), (20043046, 20043102), (20043219, 20043283), (20043432, 20043624), (20043739, 20043821), (20043877, 20043933), (20044059, 20044117), (20044453, 20044526), (20044621, 20044679), (20044766, 20044980), (20045174, 20045229), (20045367, 20045427), (20045891, 20045948), (20046081, 20046138), (20046255, 20046321), (20046470, 20046523), (20046638, 20046837), (20046893, 20046951), (20047077, 20047139), (20047475, 20047542), (20047724, 20047795), (20047724, 20047798), (20047989, 20048055), (20048339, 20048402), (20048575, 20048626)] 2021-10-25 09:34:14.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23715166, 23715901), (23715717, 23715901), (23716320, 23716372)] 2021-10-25 09:34:14.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033088: ['FBtr0086118', 'FBtr0086119'] 2021-10-25 09:34:14.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283728: ['FBtr0085949', 'FBtr0343884'] 2021-10-25 09:34:14.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039979: ['FBtr0307119'] 2021-10-25 09:34:14.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039979 has a single transcript. 2021-10-25 09:34:14.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6673817, 6673873), (6674190, 6674260), (6674727, 6674780)] 2021-10-25 09:34:14.421 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6674260, 6675061, 'FBtr0086118_exon_3') contains intron (6674727, 6674780) 2021-10-25 09:34:14.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086118_exon_3'] 2021-10-25 09:34:14.422 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039987: ['FBtr0302440'] 2021-10-25 09:34:14.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0039987 has a single transcript. 2021-10-25 09:34:14.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036685: ['FBtr0075293', 'FBtr0075295', 'FBtr0075294'] 2021-10-25 09:34:14.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21914748, 21914801), (21914951, 21915015), (21914966, 21915015), (21915198, 21915257)] 2021-10-25 09:34:14.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039993: ['FBtr0113761', 'FBtr0302409', 'FBtr0302410'] 2021-10-25 09:34:14.446 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12660382, 12660456), (12660385, 12660456), (12660621, 12660677), (12660900, 12660972), (12661196, 12661260), (12661196, 12665699), (12661196, 12664984), (12661196, 12662286), (12661196, 12667834), (12665232, 12665699), (12665232, 12665744), (12667994, 12669886)] 2021-10-25 09:34:14.447 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12664984, 12665799, 'FBtr0087868_exon_1') contains intron (12665232, 12665699) 2021-10-25 09:34:14.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064123: ['FBtr0091649'] 2021-10-25 09:34:14.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064123 has a single transcript. 2021-10-25 09:34:14.448 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12664984, 12665799, 'FBtr0339740_exon_1') contains intron (12665232, 12665699) 2021-10-25 09:34:14.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087868_exon_1', 'FBtr0339740_exon_1'] 2021-10-25 09:34:14.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064126: ['FBtr0091720', 'FBtr0091719', 'FBtr0339607', 'FBtr0345322'] 2021-10-25 09:34:14.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028675: ['FBtr0452144'] 2021-10-25 09:34:14.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028675 has a single transcript. 2021-10-25 09:34:14.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028683: ['FBtr0087840'] 2021-10-25 09:34:14.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028683 has a single transcript. 2021-10-25 09:34:14.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033089: ['FBtr0086144', 'FBtr0307502'] 2021-10-25 09:34:14.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028684: ['FBtr0084452'] 2021-10-25 09:34:14.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028684 has a single transcript. 2021-10-25 09:34:14.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17013929, 17013992), (17014904, 17014986), (17015077, 17015140), (17015258, 17015742), (17015266, 17015672), (17015266, 17015742)] 2021-10-25 09:34:14.505 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0283741: ['FBtr0302654', 'FBtr0302655', 'FBtr0302656', 'FBtr0302657', 'FBtr0302658', 'FBtr0302659', 'FBtr0309966', 'FBtr0309967', 'FBtr0309968', 'FBtr0309969', 'FBtr0332901'] 2021-10-25 09:34:14.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028685: ['FBtr0305495'] 2021-10-25 09:34:14.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028685 has a single transcript. 2021-10-25 09:34:14.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028686: ['FBtr0073436', 'FBtr0346274'] 2021-10-25 09:34:14.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1590586, 1590649), (1590883, 1590939), (1591017, 1594945), (1595192, 1595765), (1595984, 1596035), (1596128, 1596187)] 2021-10-25 09:34:14.529 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1590569, 1590883, 'FBtr0302409_exon_1') contains intron (1590586, 1590649) 2021-10-25 09:34:14.530 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1590569, 1590883, 'FBtr0302410_exon_1') contains intron (1590586, 1590649) 2021-10-25 09:34:14.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302409_exon_1', 'FBtr0302410_exon_1'] 2021-10-25 09:34:14.530 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6675540, 6675606)] 2021-10-25 09:34:14.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11125348, 11125422), (11125506, 11125564)] 2021-10-25 09:34:14.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8244141, 8244196), (8246185, 8246242), (8246400, 8246454), (8246608, 8246670), (8247328, 8247385), (8247430, 8247485), (8247651, 8247708), (8247894, 8247953)] 2021-10-25 09:34:14.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033090: ['FBtr0086122'] 2021-10-25 09:34:14.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033090 has a single transcript. 2021-10-25 09:34:14.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036686: ['FBtr0075274'] 2021-10-25 09:34:14.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036686 has a single transcript. 2021-10-25 09:34:14.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033092: ['FBtr0086120', 'FBtr0086121', 'FBtr0306112'] 2021-10-25 09:34:14.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003227: ['FBtr0083193', 'FBtr0334595'] 2021-10-25 09:34:14.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036687: ['FBtr0075291'] 2021-10-25 09:34:14.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036687 has a single transcript. 2021-10-25 09:34:14.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028687: ['FBtr0088947'] 2021-10-25 09:34:14.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028687 has a single transcript. 2021-10-25 09:34:14.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036688: ['FBtr0075275'] 2021-10-25 09:34:14.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036688 has a single transcript. 2021-10-25 09:34:14.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028688: ['FBtr0084294'] 2021-10-25 09:34:14.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028688 has a single transcript. 2021-10-25 09:34:14.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036689: ['FBtr0089584'] 2021-10-25 09:34:14.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036689 has a single transcript. 2021-10-25 09:34:14.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0039994: ['FBtr0111288', 'FBtr0111285', 'FBtr0111287', 'FBtr0302385', 'FBtr0345008'] 2021-10-25 09:34:14.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028689: ['FBtr0087474', 'FBtr0087475', 'FBtr0306558'] 2021-10-25 09:34:14.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15824870, 15830353)] 2021-10-25 09:34:14.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6675912, 6691697), (6680730, 6691697), (6691825, 6691881), (6692063, 6692119), (6692236, 6692292)] 2021-10-25 09:34:14.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14750716, 14750782), (14750995, 14751144), (14751651, 14751715), (14752040, 14752205), (14752040, 14752792)] 2021-10-25 09:34:14.706 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14751715, 14752271, 'FBtr0087475_exon_1') contains intron (14752040, 14752205) 2021-10-25 09:34:14.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087475_exon_1'] 2021-10-25 09:34:14.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003231: ['FBtr0081253', 'FBtr0100289'] 2021-10-25 09:34:14.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064225: ['FBtr0111129', 'FBtr0111132', 'FBtr0344793', 'FBtr0332633'] 2021-10-25 09:34:14.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4744401, 4749221), (4744465, 4749221), (4744637, 4749221), (4744894, 4749221), (4749386, 4749445), (4749513, 4754499), (4754670, 4756170), (4756259, 4756315), (4756588, 4756654), (4757165, 4757235), (4757748, 4757801)] 2021-10-25 09:34:14.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1774222, 1788663), (1788768, 1843691), (1824272, 1843691), (1825981, 1843691), (1827420, 1843691), (1832059, 1843691), (1838463, 1843691), (1842855, 1843444), (1842883, 1843691), (1842883, 1843444), (1843578, 1843691), (1844087, 1850619)] 2021-10-25 09:34:14.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19542988, 19543619), (19545101, 19545156)] 2021-10-25 09:34:14.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036690: ['FBtr0290221'] 2021-10-25 09:34:14.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036690 has a single transcript. 2021-10-25 09:34:14.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033093: ['FBtr0086123'] 2021-10-25 09:34:14.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033093 has a single transcript. 2021-10-25 09:34:14.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261674: ['FBtr0344221', 'FBtr0302981', 'FBtr0302980', 'FBtr0302982'] 2021-10-25 09:34:14.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036691: ['FBtr0075278'] 2021-10-25 09:34:14.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036691 has a single transcript. 2021-10-25 09:34:14.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036695: ['FBtr0075279'] 2021-10-25 09:34:14.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036695 has a single transcript. 2021-10-25 09:34:14.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033095: ['FBtr0086140', 'FBtr0302166', 'FBtr0336659'] 2021-10-25 09:34:14.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036696: ['FBtr0075286', 'FBtr0300718'] 2021-10-25 09:34:14.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028690: ['FBtr0078629'] 2021-10-25 09:34:14.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028690 has a single transcript. 2021-10-25 09:34:14.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22535063, 22535616), (22536054, 22536114), (22536378, 22536536), (22536565, 22536620)] 2021-10-25 09:34:14.826 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22536536, 22536650, 'FBtr0111129_exon_1') contains intron (22536565, 22536620) 2021-10-25 09:34:14.827 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22536536, 22536884, 'FBtr0344793_exon_1') contains intron (22536565, 22536620) 2021-10-25 09:34:14.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111129_exon_1', 'FBtr0344793_exon_1'] 2021-10-25 09:34:14.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028691: ['FBtr0084469', 'FBtr0084470'] 2021-10-25 09:34:14.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003248: ['FBtr0083697'] 2021-10-25 09:34:14.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003248 has a single transcript. 2021-10-25 09:34:14.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003249: ['FBtr0083876'] 2021-10-25 09:34:14.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003249 has a single transcript. 2021-10-25 09:34:14.860 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17044659, 17044712), (17044950, 17045005)] 2021-10-25 09:34:14.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003250: ['FBtr0075338'] 2021-10-25 09:34:14.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003250 has a single transcript. 2021-10-25 09:34:14.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23731981, 23732042), (23732573, 23732626), (23732740, 23732795), (23732910, 23733251)] 2021-10-25 09:34:14.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12790249, 12791434), (12790382, 12791434), (12791633, 12793815), (12794000, 12794061), (12794315, 12794380), (12794656, 12794796), (12795085, 12795162), (12795088, 12795162), (12795324, 12795457)] 2021-10-25 09:34:14.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6700817, 6700881), (6701122, 6701189), (6701371, 6701812), (6701922, 6702386), (6704586, 6705234), (6706198, 6715103), (6706198, 6707644), (6706198, 6712082)] 2021-10-25 09:34:14.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003254: ['FBtr0086512', 'FBtr0330057', 'FBtr0330058'] 2021-10-25 09:34:14.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036697: ['FBtr0075282', 'FBtr0075283'] 2021-10-25 09:34:14.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028692: ['FBtr0085385', 'FBtr0330379', 'FBtr0334532'] 2021-10-25 09:34:14.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19270786, 19277861), (19276152, 19277861)] 2021-10-25 09:34:14.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040001: ['FBtr0305959'] 2021-10-25 09:34:14.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040001 has a single transcript. 2021-10-25 09:34:14.951 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086512': ['FBtr0330058']} 2021-10-25 09:34:14.951 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330058']] 2021-10-25 09:34:14.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040005: ['FBtr0111291', 'FBtr0111292', 'FBtr0334995', 'FBtr0334996'] 2021-10-25 09:34:14.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17049737, 17050512), (17050637, 17051320), (17051454, 17051860), (17051932, 17052002), (17052134, 17052720), (17052878, 17052954), (17053285, 17054297)] 2021-10-25 09:34:14.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:14.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:14.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033096: ['FBtr0086139'] 2021-10-25 09:34:14.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033096 has a single transcript. 2021-10-25 09:34:14.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064227: ['FBtr0073154'] 2021-10-25 09:34:14.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064227 has a single transcript. 2021-10-25 09:34:14.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033097: ['FBtr0306802'] 2021-10-25 09:34:14.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033097 has a single transcript. 2021-10-25 09:34:14.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064237: ['FBtr0086668'] 2021-10-25 09:34:14.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064237 has a single transcript. 2021-10-25 09:34:14.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033100: ['FBtr0086135', 'FBtr0332940'] 2021-10-25 09:34:14.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064766: ['FBtr0076165'] 2021-10-25 09:34:14.998 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064766 has a single transcript. 2021-10-25 09:34:15.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003255: ['FBtr0080610'] 2021-10-25 09:34:15.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003255 has a single transcript. 2021-10-25 09:34:15.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0064912: ['FBtr0300075'] 2021-10-25 09:34:15.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0064912 has a single transcript. 2021-10-25 09:34:15.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29153608, 29153695), (29154673, 29154735), (29156043, 29156301)] 2021-10-25 09:34:15.008 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29153523, 29154673, 'FBtr0334532_exon_1') contains intron (29153608, 29153695) 2021-10-25 09:34:15.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334532_exon_1'] 2021-10-25 09:34:15.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.022 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085385': ['FBtr0330379']} 2021-10-25 09:34:15.022 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330379']] 2021-10-25 09:34:15.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065032: ['FBtr0074410', 'FBtr0113478', 'FBtr0334462'] 2021-10-25 09:34:15.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003256: ['FBtr0113700', 'FBtr0113701', 'FBtr0113702', 'FBtr0113703', 'FBtr0329919', 'FBtr0329920', 'FBtr0345337'] 2021-10-25 09:34:15.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036698: ['FBtr0075284'] 2021-10-25 09:34:15.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036698 has a single transcript. 2021-10-25 09:34:15.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261675: ['FBtr0077239'] 2021-10-25 09:34:15.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261675 has a single transcript. 2021-10-25 09:34:15.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6756481, 6756542), (6756636, 6756712), (6756857, 6756919)] 2021-10-25 09:34:15.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261679: ['FBtr0303074'] 2021-10-25 09:34:15.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261679 has a single transcript. 2021-10-25 09:34:15.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036702: ['FBtr0075252', 'FBtr0075251'] 2021-10-25 09:34:15.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4672219, 4672277), (4673041, 4673113), (4673059, 4673113), (4673062, 4673113), (4673223, 4673276), (4673223, 4673279), (4673227, 4673276)] 2021-10-25 09:34:15.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4672277, 4673227, 'FBtr0111292_exon_2') contains intron (4673041, 4673113) 2021-10-25 09:34:15.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111292_exon_2'] 2021-10-25 09:34:15.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261680: ['FBtr0303075'] 2021-10-25 09:34:15.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261680 has a single transcript. 2021-10-25 09:34:15.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261681: ['FBtr0303076'] 2021-10-25 09:34:15.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261681 has a single transcript. 2021-10-25 09:34:15.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261682: ['FBtr0303077'] 2021-10-25 09:34:15.076 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261682 has a single transcript. 2021-10-25 09:34:15.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028693: ['FBtr0075308'] 2021-10-25 09:34:15.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028693 has a single transcript. 2021-10-25 09:34:15.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028694: ['FBtr0079027'] 2021-10-25 09:34:15.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028694 has a single transcript. 2021-10-25 09:34:15.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261683: ['FBtr0303078'] 2021-10-25 09:34:15.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261683 has a single transcript. 2021-10-25 09:34:15.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028695: ['FBtr0074893'] 2021-10-25 09:34:15.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028695 has a single transcript. 2021-10-25 09:34:15.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261686: ['FBtr0303084', 'FBtr0303085', 'FBtr0303086'] 2021-10-25 09:34:15.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17240608, 17240662), (17241058, 17241216), (17241466, 17241954), (17241719, 17241784)] 2021-10-25 09:34:15.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.099 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17104986, 17105482), (17105656, 17105769), (17105656, 17105749)] 2021-10-25 09:34:15.100 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17105482, 17105849, 'FBtr0113478_exon_1') contains intron (17105656, 17105769) 2021-10-25 09:34:15.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113478_exon_1'] 2021-10-25 09:34:15.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033101: ['FBtr0086134'] 2021-10-25 09:34:15.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033101 has a single transcript. 2021-10-25 09:34:15.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028697: ['FBtr0113742', 'FBtr0113743', 'FBtr0113744', 'FBtr0301801', 'FBtr0308333', 'FBtr0308334', 'FBtr0308335', 'FBtr0308336'] 2021-10-25 09:34:15.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033104: ['FBtr0086212'] 2021-10-25 09:34:15.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033104 has a single transcript. 2021-10-25 09:34:15.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033108: ['FBtr0086160', 'FBtr0086161'] 2021-10-25 09:34:15.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10356354, 10356413), (10356376, 10356487)] 2021-10-25 09:34:15.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036703: ['FBtr0075212'] 2021-10-25 09:34:15.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036703 has a single transcript. 2021-10-25 09:34:15.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10356170, 10356800, 'FBtr0303084_exon_1') contains intron (10356354, 10356413) 2021-10-25 09:34:15.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303084_exon_1'] 2021-10-25 09:34:15.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036704: ['FBtr0075250', 'FBtr0332785'] 2021-10-25 09:34:15.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6828667, 6829560), (6828667, 6829501), (6830048, 6832629), (6832931, 6833614), (6833687, 6833754), (6834926, 6835492), (6836069, 6836526)] 2021-10-25 09:34:15.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1071573, 1072267), (1072045, 1072267), (1072045, 1072250), (1072439, 1076634), (1072439, 1074271), (1074364, 1076634), (1076761, 1076815), (1076761, 1080330), (1076877, 1080330), (1080441, 1105846), (1105981, 1113197), (1113482, 1113536), (1113725, 1120624), (1113725, 1124962)] 2021-10-25 09:34:15.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1071974, 1072439, 'FBtr0113701_exon_1') contains intron (1072045, 1072267) 2021-10-25 09:34:15.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1071974, 1072439, 'FBtr0113702_exon_1') contains intron (1072045, 1072267) 2021-10-25 09:34:15.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113701_exon_1', 'FBtr0113702_exon_1'] 2021-10-25 09:34:15.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040007: ['FBtr0334985', 'FBtr0111120'] 2021-10-25 09:34:15.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065035: ['FBtr0074168', 'FBtr0445838'] 2021-10-25 09:34:15.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:15.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4516319, 4516377)] 2021-10-25 09:34:15.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15858537, 15858599), (15859141, 15859192)] 2021-10-25 09:34:15.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033110: ['FBtr0336684'] 2021-10-25 09:34:15.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033110 has a single transcript. 2021-10-25 09:34:15.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033112: ['FBtr0300358', 'FBtr0310521'] 2021-10-25 09:34:15.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261697: ['FBtr0303079'] 2021-10-25 09:34:15.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261697 has a single transcript. 2021-10-25 09:34:15.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036705: ['FBtr0075213'] 2021-10-25 09:34:15.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036705 has a single transcript. 2021-10-25 09:34:15.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284080: ['FBtr0452096'] 2021-10-25 09:34:15.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284080 has a single transcript. 2021-10-25 09:34:15.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284081: ['FBtr0452097'] 2021-10-25 09:34:15.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284081 has a single transcript. 2021-10-25 09:34:15.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036706: ['FBtr0075249'] 2021-10-25 09:34:15.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036706 has a single transcript. 2021-10-25 09:34:15.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040009: ['FBtr0302386', 'FBtr0344794'] 2021-10-25 09:34:15.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284082: ['FBtr0452098'] 2021-10-25 09:34:15.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284082 has a single transcript. 2021-10-25 09:34:15.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261698: ['FBtr0303082', 'FBtr0303081', 'FBtr0303080', 'FBtr0303083', 'FBtr0329869', 'FBtr0329872', 'FBtr0329938', 'FBtr0305946', 'FBtr0330616'] 2021-10-25 09:34:15.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065046: ['FBtr0091641'] 2021-10-25 09:34:15.316 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065046 has a single transcript. 2021-10-25 09:34:15.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036707: ['FBtr0075214'] 2021-10-25 09:34:15.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036707 has a single transcript. 2021-10-25 09:34:15.318 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6879490, 6879663), (6879805, 6879863)] 2021-10-25 09:34:15.319 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27267283, 27267607), (27267283, 27267591), (27267283, 27267513), (27267455, 27267591), (27267455, 27267513), (27267459, 27267591), (27267523, 27267591), (27267918, 27268091)] 2021-10-25 09:34:15.319 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6879284, 6880770, 'FBtr0310521_exon_1') contains intron (6879490, 6879663) 2021-10-25 09:34:15.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310521_exon_1'] 2021-10-25 09:34:15.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.319 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27267255, 27267918, 'FBtr0113743_exon_1') contains intron (27267283, 27267607) 2021-10-25 09:34:15.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27267513, 27267918, 'FBtr0113744_exon_2') contains intron (27267523, 27267591) 2021-10-25 09:34:15.320 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27267513, 27267918, 'FBtr0308333_exon_2') contains intron (27267523, 27267591) 2021-10-25 09:34:15.321 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27267254, 27267523, 'FBtr0308336_exon_1') contains intron (27267283, 27267513) 2021-10-25 09:34:15.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113743_exon_1', 'FBtr0113744_exon_2', 'FBtr0308333_exon_2', 'FBtr0308336_exon_1'] 2021-10-25 09:34:15.321 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065047: ['FBtr0091605'] 2021-10-25 09:34:15.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065047 has a single transcript. 2021-10-25 09:34:15.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284083: ['FBtr0452099', 'FBtr0452100'] 2021-10-25 09:34:15.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036708: ['FBtr0075248'] 2021-10-25 09:34:15.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036708 has a single transcript. 2021-10-25 09:34:15.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065048: ['FBtr0091925'] 2021-10-25 09:34:15.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065048 has a single transcript. 2021-10-25 09:34:15.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036709: ['FBtr0075247'] 2021-10-25 09:34:15.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036709 has a single transcript. 2021-10-25 09:34:15.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065051: ['FBtr0091708'] 2021-10-25 09:34:15.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065051 has a single transcript. 2021-10-25 09:34:15.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036710: ['FBtr0075245', 'FBtr0075246', 'FBtr0331847'] 2021-10-25 09:34:15.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22540324, 22540377)] 2021-10-25 09:34:15.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065053: ['FBtr0091653'] 2021-10-25 09:34:15.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065053 has a single transcript. 2021-10-25 09:34:15.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065055: ['FBtr0091677'] 2021-10-25 09:34:15.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065055 has a single transcript. 2021-10-25 09:34:15.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065057: ['FBtr0091724'] 2021-10-25 09:34:15.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065057 has a single transcript. 2021-10-25 09:34:15.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10351736, 10351792), (10351941, 10352027)] 2021-10-25 09:34:15.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033113: ['FBtr0086162', 'FBtr0305679'] 2021-10-25 09:34:15.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065058: ['FBtr0091798'] 2021-10-25 09:34:15.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065058 has a single transcript. 2021-10-25 09:34:15.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065059: ['FBtr0091781'] 2021-10-25 09:34:15.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065059 has a single transcript. 2021-10-25 09:34:15.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040010: ['FBtr0332630', 'FBtr0332631', 'FBtr0332632'] 2021-10-25 09:34:15.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065064: ['FBtr0091755'] 2021-10-25 09:34:15.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065064 has a single transcript. 2021-10-25 09:34:15.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17337683, 17337742), (17338072, 17338128), (17338718, 17338795), (17338736, 17338795), (17339100, 17339156)] 2021-10-25 09:34:15.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6881077, 6881756), (6882638, 6882708), (6882850, 6882919)] 2021-10-25 09:34:15.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065066: ['FBtr0091779'] 2021-10-25 09:34:15.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065066 has a single transcript. 2021-10-25 09:34:15.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284084: ['FBtr0079432'] 2021-10-25 09:34:15.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284084 has a single transcript. 2021-10-25 09:34:15.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065070: ['FBtr0091615'] 2021-10-25 09:34:15.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065070 has a single transcript. 2021-10-25 09:34:15.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284220: ['FBtr0081287', 'FBtr0332320'] 2021-10-25 09:34:15.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065071: ['FBtr0091642'] 2021-10-25 09:34:15.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065071 has a single transcript. 2021-10-25 09:34:15.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003257: ['FBtr0084038'] 2021-10-25 09:34:15.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003257 has a single transcript. 2021-10-25 09:34:15.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22550488, 22550547)] 2021-10-25 09:34:15.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065073: ['FBtr0091664'] 2021-10-25 09:34:15.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065073 has a single transcript. 2021-10-25 09:34:15.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065076: ['FBtr0091934'] 2021-10-25 09:34:15.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065076 has a single transcript. 2021-10-25 09:34:15.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033115: ['FBtr0086164', 'FBtr0309371'] 2021-10-25 09:34:15.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19448061, 19448142), (19451180, 19451246), (19451670, 19451727), (19452315, 19452538), (19452315, 19453250), (19452793, 19453250)] 2021-10-25 09:34:15.495 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003261: ['FBtr0078649', 'FBtr0078650', 'FBtr0078651', 'FBtr0078652', 'FBtr0078653', 'FBtr0078654', 'FBtr0309319', 'FBtr0309320', 'FBtr0309321', 'FBtr0309322', 'FBtr0302597', 'FBtr0301947'] 2021-10-25 09:34:15.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065080: ['FBtr0091611'] 2021-10-25 09:34:15.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065080 has a single transcript. 2021-10-25 09:34:15.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065081: ['FBtr0091797'] 2021-10-25 09:34:15.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065081 has a single transcript. 2021-10-25 09:34:15.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036711: ['FBtr0075243'] 2021-10-25 09:34:15.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036711 has a single transcript. 2021-10-25 09:34:15.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036712: ['FBtr0075242', 'FBtr0331846'] 2021-10-25 09:34:15.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065083: ['FBtr0091790'] 2021-10-25 09:34:15.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065083 has a single transcript. 2021-10-25 09:34:15.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6885659, 6886513), (6886424, 6886513), (6887448, 6887854), (6887996, 6888060)] 2021-10-25 09:34:15.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.551 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10324068, 10324129), (10324318, 10325189), (10325235, 10325310), (10325547, 10325688), (10325894, 10328857), (10325894, 10326361), (10325894, 10328782), (10326538, 10328782), (10326538, 10328857), (10328989, 10329043), (10329220, 10329301), (10329229, 10329301), (10329413, 10329469), (10329633, 10329686), (10329902, 10329968), (10330074, 10330700), (10330074, 10331673), (10331255, 10331673), (10331824, 10332055), (10332367, 10333632), (10332367, 10334895), (10333944, 10334895), (10335161, 10335263), (10335413, 10336327), (10336468, 10336606), (10336785, 10336855), (10337119, 10338621), (10338805, 10338869), (10338964, 10339025), (10339109, 10339165), (10339240, 10339302), (10339501, 10339565), (10339665, 10340122), (10340202, 10357514), (10340202, 10388133), (10340202, 10343959), (10340202, 10412235), (10357708, 10364398), (10357745, 10364739), (10388735, 10395102), (10412896, 10416457)] 2021-10-25 09:34:15.552 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0303082_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065084: ['FBtr0091699'] 2021-10-25 09:34:15.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065084 has a single transcript. 2021-10-25 09:34:15.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0303081_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.554 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0303080_exon_27') contains intron (10325235, 10325310) 2021-10-25 09:34:15.555 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0303083_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.556 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0329869_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.557 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0329872_exon_24') contains intron (10325235, 10325310) 2021-10-25 09:34:15.558 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0329938_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.560 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10325189, 10325547, 'FBtr0330616_exon_26') contains intron (10325235, 10325310) 2021-10-25 09:34:15.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303082_exon_26', 'FBtr0303081_exon_26', 'FBtr0303080_exon_27', 'FBtr0303083_exon_26', 'FBtr0329869_exon_26', 'FBtr0329872_exon_24', 'FBtr0329938_exon_26', 'FBtr0330616_exon_26'] 2021-10-25 09:34:15.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284221: ['FBtr0076052', 'FBtr0300339'] 2021-10-25 09:34:15.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065087: ['FBtr0091665'] 2021-10-25 09:34:15.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065087 has a single transcript. 2021-10-25 09:34:15.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065088: ['FBtr0091663'] 2021-10-25 09:34:15.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065088 has a single transcript. 2021-10-25 09:34:15.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065092: ['FBtr0091639'] 2021-10-25 09:34:15.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065092 has a single transcript. 2021-10-25 09:34:15.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17342758, 17342840), (17343559, 17343616), (17343988, 17344129), (17344468, 17344534)] 2021-10-25 09:34:15.584 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17344129, 17344696, 'FBtr0075242_exon_1') contains intron (17344468, 17344534) 2021-10-25 09:34:15.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040011: ['FBtr0111252', 'FBtr0302387'] 2021-10-25 09:34:15.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075242_exon_1'] 2021-10-25 09:34:15.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065094: ['FBtr0091921'] 2021-10-25 09:34:15.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065094 has a single transcript. 2021-10-25 09:34:15.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065095: ['FBtr0091687'] 2021-10-25 09:34:15.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065095 has a single transcript. 2021-10-25 09:34:15.599 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0303083': ['FBtr0329869', 'FBtr0330616']} 2021-10-25 09:34:15.600 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329869', 'FBtr0330616']] 2021-10-25 09:34:15.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065096: ['FBtr0091700'] 2021-10-25 09:34:15.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065096 has a single transcript. 2021-10-25 09:34:15.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12068353, 12068409), (12068612, 12068678), (12068834, 12068898), (12069809, 12069917), (12070724, 12070798), (12071001, 12071064), (12071196, 12071586), (12071760, 12071863), (12072071, 12079940), (12080040, 12080794), (12080958, 12081346), (12080958, 12081560)] 2021-10-25 09:34:15.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065097: ['FBtr0091638'] 2021-10-25 09:34:15.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065097 has a single transcript. 2021-10-25 09:34:15.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033117: ['FBtr0307183', 'FBtr0336740', 'FBtr0336741'] 2021-10-25 09:34:15.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065098: ['FBtr0091662'] 2021-10-25 09:34:15.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065098 has a single transcript. 2021-10-25 09:34:15.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065099: ['FBtr0091929'] 2021-10-25 09:34:15.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065099 has a single transcript. 2021-10-25 09:34:15.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22579252, 22579820), (22581133, 22584121), (22584682, 22584741)] 2021-10-25 09:34:15.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.634 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065100: ['FBtr0091693'] 2021-10-25 09:34:15.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065100 has a single transcript. 2021-10-25 09:34:15.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065101: ['FBtr0091636'] 2021-10-25 09:34:15.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065101 has a single transcript. 2021-10-25 09:34:15.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036713: ['FBtr0075241'] 2021-10-25 09:34:15.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036713 has a single transcript. 2021-10-25 09:34:15.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065102: ['FBtr0091920'] 2021-10-25 09:34:15.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065102 has a single transcript. 2021-10-25 09:34:15.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036714: ['FBtr0075215', 'FBtr0344911', 'FBtr0331845', 'FBtr0347064'] 2021-10-25 09:34:15.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065104: ['FBtr0091750'] 2021-10-25 09:34:15.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065104 has a single transcript. 2021-10-25 09:34:15.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065105: ['FBtr0091695'] 2021-10-25 09:34:15.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065105 has a single transcript. 2021-10-25 09:34:15.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028699: ['FBtr0073354', 'FBtr0331423', 'FBtr0345597'] 2021-10-25 09:34:15.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284222: ['FBtr0452121'] 2021-10-25 09:34:15.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284222 has a single transcript. 2021-10-25 09:34:15.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065107: ['FBtr0091919'] 2021-10-25 09:34:15.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065107 has a single transcript. 2021-10-25 09:34:15.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284223: ['FBtr0452122'] 2021-10-25 09:34:15.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284223 has a single transcript. 2021-10-25 09:34:15.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6923417, 6923479), (6923659, 6923879), (6924486, 6924552)] 2021-10-25 09:34:15.691 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065108: ['FBtr0100832'] 2021-10-25 09:34:15.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065108 has a single transcript. 2021-10-25 09:34:15.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284224: ['FBtr0452123'] 2021-10-25 09:34:15.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284224 has a single transcript. 2021-10-25 09:34:15.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284225: ['FBtr0452124'] 2021-10-25 09:34:15.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284225 has a single transcript. 2021-10-25 09:34:15.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065109: ['FBtr0100831'] 2021-10-25 09:34:15.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065109 has a single transcript. 2021-10-25 09:34:15.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040020: ['FBtr0113739', 'FBtr0113740'] 2021-10-25 09:34:15.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284226: ['FBtr0452125'] 2021-10-25 09:34:15.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284226 has a single transcript. 2021-10-25 09:34:15.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0065110: ['FBtr0100097'] 2021-10-25 09:34:15.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0065110 has a single transcript. 2021-10-25 09:34:15.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284227: ['FBtr0452126'] 2021-10-25 09:34:15.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284227 has a single transcript. 2021-10-25 09:34:15.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066084: ['FBtr0100231'] 2021-10-25 09:34:15.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0066084 has a single transcript. 2021-10-25 09:34:15.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284228: ['FBtr0452127'] 2021-10-25 09:34:15.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284228 has a single transcript. 2021-10-25 09:34:15.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284229: ['FBtr0452128'] 2021-10-25 09:34:15.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284229 has a single transcript. 2021-10-25 09:34:15.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284230: ['FBtr0452129'] 2021-10-25 09:34:15.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284230 has a single transcript. 2021-10-25 09:34:15.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4910862, 4912671), (4912840, 4913453), (4913619, 4913694), (4913956, 4917456), (4917647, 4918319), (4918514, 4918595), (4918689, 4918758), (4918861, 4919100)] 2021-10-25 09:34:15.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17352579, 17353131), (17353244, 17353310), (17353737, 17353792), (17353737, 17353795), (17354043, 17354105), (17354699, 17354757), (17355571, 17355663), (17355571, 17355666)] 2021-10-25 09:34:15.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066101: ['FBtr0113480', 'FBtr0301466', 'FBtr0301467', 'FBtr0301469', 'FBtr0301470', 'FBtr0301471', 'FBtr0335235', 'FBtr0335236', 'FBtr0335237', 'FBtr0335238'] 2021-10-25 09:34:15.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25115605, 25115661), (25115724, 25115828)] 2021-10-25 09:34:15.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284231: ['FBtr0452130', 'FBtr0452131'] 2021-10-25 09:34:15.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25115661, 25115838, 'FBtr0113740_exon_1') contains intron (25115724, 25115828) 2021-10-25 09:34:15.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113740_exon_1'] 2021-10-25 09:34:15.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.794 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6001360, 6001557), (6001736, 6001832), (6001736, 6002062), (6001736, 6003672), (6002721, 6003672), (6002753, 6003672), (6003098, 6003672), (6003911, 6004016), (6005126, 6005949), (6005126, 6008036), (6005126, 6005205), (6005297, 6007445), (6005297, 6008036), (6006102, 6008036), (6006114, 6008036), (6008306, 6008555), (6008306, 6008550), (6008309, 6008550)] 2021-10-25 09:34:15.796 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6008036, 6008573, 'FBtr0078651_exon_1') contains intron (6008306, 6008555) 2021-10-25 09:34:15.796 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6008036, 6008573, 'FBtr0078652_exon_1') contains intron (6008306, 6008555) 2021-10-25 09:34:15.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6008036, 6008573, 'FBtr0078653_exon_1') contains intron (6008306, 6008555) 2021-10-25 09:34:15.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6002062, 6003911, 'FBtr0309319_exon_4') contains intron (6002721, 6003672) 2021-10-25 09:34:15.798 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6008036, 6008573, 'FBtr0302597_exon_1') contains intron (6008306, 6008555) 2021-10-25 09:34:15.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078651_exon_1', 'FBtr0078652_exon_1', 'FBtr0078653_exon_1', 'FBtr0309319_exon_4', 'FBtr0302597_exon_1'] 2021-10-25 09:34:15.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033121: ['FBtr0086185', 'FBtr0345011', 'FBtr0345802'] 2021-10-25 09:34:15.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17705190, 17706353), (17708045, 17715705), (17717749, 17719173)] 2021-10-25 09:34:15.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040022: ['FBtr0113869', 'FBtr0113870', 'FBtr0113871', 'FBtr0302243', 'FBtr0302244', 'FBtr0302245', 'FBtr0302246', 'FBtr0302247', 'FBtr0302248'] 2021-10-25 09:34:15.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028700: ['FBtr0080225', 'FBtr0344786'] 2021-10-25 09:34:15.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261699: ['FBtr0333241'] 2021-10-25 09:34:15.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261699 has a single transcript. 2021-10-25 09:34:15.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284232: ['FBtr0452132'] 2021-10-25 09:34:15.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284232 has a single transcript. 2021-10-25 09:34:15.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6972729, 6972787), (6974000, 6974946)] 2021-10-25 09:34:15.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261700: ['FBtr0340530'] 2021-10-25 09:34:15.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261700 has a single transcript. 2021-10-25 09:34:15.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284233: ['FBtr0452133'] 2021-10-25 09:34:15.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284233 has a single transcript. 2021-10-25 09:34:15.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261702: ['FBtr0303196', 'FBtr0343094'] 2021-10-25 09:34:15.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036715: ['FBtr0075239', 'FBtr0075240', 'FBtr0309231'] 2021-10-25 09:34:15.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284234: ['FBtr0452134'] 2021-10-25 09:34:15.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284234 has a single transcript. 2021-10-25 09:34:15.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11130001, 11130111)] 2021-10-25 09:34:15.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284235: ['FBtr0452135', 'FBtr0452136', 'FBtr0452137'] 2021-10-25 09:34:15.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7143612, 7143767)] 2021-10-25 09:34:15.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17368583, 17368643), (17369785, 17369854), (17370157, 17370219), (17371834, 17371893), (17372155, 17372217), (17373715, 17373785), (17374150, 17378285), (17378592, 17379345), (17378592, 17379360), (17378863, 17379345)] 2021-10-25 09:34:15.959 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028703: ['FBtr0300327', 'FBtr0273247', 'FBtr0273248', 'FBtr0273250', 'FBtr0333347', 'FBtr0333348'] 2021-10-25 09:34:15.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25742012, 25742153), (25742315, 25742391), (25742525, 25744683), (25742525, 25744365), (25744542, 25744683), (25744882, 25744979), (25746392, 25747006), (25747233, 25748102), (25747233, 25749026), (25747233, 25749269), (25748225, 25749269), (25748225, 25749026), (25749143, 25749269), (25749389, 25752060), (25749389, 25754344), (25752191, 25752800), (25754485, 25761241), (25754485, 25758791), (25759285, 25760202), (25760678, 25761241)] 2021-10-25 09:34:15.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:15.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261703: ['FBtr0331765', 'FBtr0303198', 'FBtr0303199', 'FBtr0310308'] 2021-10-25 09:34:15.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033122: ['FBtr0086170', 'FBtr0303225', 'FBtr0303226'] 2021-10-25 09:34:15.998 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10127577, 10128580), (10128692, 10128822), (10128692, 10128783), (10129029, 10131621), (10131694, 10131773), (10132160, 10132304), (10132449, 10132749), (10133223, 10133841), (10134017, 10135467), (10135672, 10135741), (10135857, 10136460), (10136535, 10136594)] 2021-10-25 09:34:15.999 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:15.999 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25107630, 25109300), (25109069, 25109323), (25109069, 25109230), (25109069, 25109300), (25109069, 25109309), (25109238, 25109323), (25109238, 25109300), (25109238, 25109309), (25109604, 25109659), (25109909, 25109963), (25113571, 25114033), (25114667, 25114723)] 2021-10-25 09:34:16.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25108996, 25109238, 'FBtr0113870_exon_1') contains intron (25109069, 25109230) 2021-10-25 09:34:16.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25108996, 25109238, 'FBtr0113871_exon_1') contains intron (25109069, 25109230) 2021-10-25 09:34:16.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113870_exon_1', 'FBtr0113871_exon_1'] 2021-10-25 09:34:16.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6986776, 6986833), (6986933, 6987637), (6986933, 6987780), (6987688, 6987780), (6988265, 6988570), (6988265, 6988582)] 2021-10-25 09:34:16.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036716: ['FBtr0075238'] 2021-10-25 09:34:16.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036716 has a single transcript. 2021-10-25 09:34:16.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15297936, 15305828), (15299107, 15306268), (15299583, 15305828), (15300622, 15305828), (15306579, 15310377), (15311216, 15315086), (15315250, 15315329), (15315684, 15315786), (15315979, 15316118), (15316350, 15316420), (15317233, 15317342), (15317482, 15317612)] 2021-10-25 09:34:16.074 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.075 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036717: ['FBtr0306800'] 2021-10-25 09:34:16.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036717 has a single transcript. 2021-10-25 09:34:16.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036723: ['FBtr0075226'] 2021-10-25 09:34:16.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036723 has a single transcript. 2021-10-25 09:34:16.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6678224, 6679985), (6678224, 6678911), (6678756, 6679985), (6678756, 6678911), (6679082, 6679985), (6679262, 6679985), (6680114, 6680174), (6680283, 6680345), (6680524, 6680946), (6680542, 6680670), (6680542, 6680946), (6680706, 6680946), (6680998, 6681064), (6681218, 6681278), (6681390, 6681463), (6681772, 6681942), (6682084, 6682140), (6682430, 6682494), (6682683, 6682745), (6682870, 6683725), (6682870, 6682997)] 2021-10-25 09:34:16.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036725: ['FBtr0075219', 'FBtr0333688', 'FBtr0333689'] 2021-10-25 09:34:16.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284236: ['FBtr0452138', 'FBtr0452139'] 2021-10-25 09:34:16.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5664391, 5665176), (5666036, 5667821), (5667942, 5668005), (5668141, 5668690), (5668141, 5668699), (5668884, 5668963), (5669082, 5673066), (5669082, 5673093), (5673265, 5673546), (5673702, 5673771), (5674076, 5674374), (5674721, 5674789), (5675208, 5676276), (5675208, 5676006), (5676063, 5676276), (5676445, 5676510), (5676759, 5676818), (5676948, 5703924), (5704070, 5704961), (5705241, 5706441), (5706573, 5716096), (5716279, 5717537), (5717738, 5720876), (5721104, 5722381), (5722568, 5726479), (5726594, 5728490), (5728642, 5731439), (5731636, 5734438), (5731636, 5734465), (5734609, 5735725), (5735920, 5735985), (5736094, 5737983), (5738163, 5738225), (5738363, 5738415), (5738573, 5738638), (5739016, 5739105), (5739334, 5739443), (5739726, 5740103), (5740207, 5746467)] 2021-10-25 09:34:16.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033124: ['FBtr0086179'] 2021-10-25 09:34:16.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033124 has a single transcript. 2021-10-25 09:34:16.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17439511, 17449392), (17439913, 17449392), (17446800, 17449392)] 2021-10-25 09:34:16.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033127: ['FBtr0089023'] 2021-10-25 09:34:16.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033127 has a single transcript. 2021-10-25 09:34:16.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033128: ['FBtr0089024'] 2021-10-25 09:34:16.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033128 has a single transcript. 2021-10-25 09:34:16.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033129: ['FBtr0089026'] 2021-10-25 09:34:16.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033129 has a single transcript. 2021-10-25 09:34:16.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033130: ['FBtr0089028', 'FBtr0336872'] 2021-10-25 09:34:16.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261704: ['FBtr0303201', 'FBtr0303202', 'FBtr0344522'] 2021-10-25 09:34:16.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284237: ['FBtr0452141', 'FBtr0452142'] 2021-10-25 09:34:16.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7035395, 7035469), (7035652, 7036042), (7036408, 7036465)] 2021-10-25 09:34:16.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036726: ['FBtr0075220'] 2021-10-25 09:34:16.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036726 has a single transcript. 2021-10-25 09:34:16.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10208128, 10208190), (10208341, 10208400), (10208644, 10208705), (10208852, 10208920), (10209024, 10209100), (10209270, 10209439), (10209608, 10209879), (10210107, 10222476), (10224024, 10227322)] 2021-10-25 09:34:16.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036727: ['FBtr0075221', 'FBtr0333690'] 2021-10-25 09:34:16.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30419023, 30419093), (30419484, 30421277), (30421353, 30421462)] 2021-10-25 09:34:16.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30419093, 30421353, 'FBtr0303201_exon_2') contains intron (30419484, 30421277) 2021-10-25 09:34:16.285 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30419093, 30422971, 'FBtr0303202_exon_1') contains intron (30419484, 30421277) 2021-10-25 09:34:16.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303201_exon_2', 'FBtr0303202_exon_1'] 2021-10-25 09:34:16.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033131: ['FBtr0306743'] 2021-10-25 09:34:16.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033131 has a single transcript. 2021-10-25 09:34:16.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003267: ['FBtr0085090', 'FBtr0085091'] 2021-10-25 09:34:16.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033132: ['FBtr0089030'] 2021-10-25 09:34:16.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033132 has a single transcript. 2021-10-25 09:34:16.326 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17470780, 17472429), (17472548, 17472608), (17473007, 17473076), (17473235, 17473290), (17473446, 17473691), (17474071, 17474135)] 2021-10-25 09:34:16.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033133: ['FBtr0089031', 'FBtr0305678'] 2021-10-25 09:34:16.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.327 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028704: ['FBtr0079926', 'FBtr0079928', 'FBtr0303908', 'FBtr0303909', 'FBtr0335506'] 2021-10-25 09:34:16.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284238: ['FBtr0452143'] 2021-10-25 09:34:16.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284238 has a single transcript. 2021-10-25 09:34:16.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284243: ['FBtr0086536', 'FBtr0086537'] 2021-10-25 09:34:16.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26877169, 26877541), (26877776, 26880564)] 2021-10-25 09:34:16.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040028: ['FBtr0070057', 'FBtr0070056', 'FBtr0345920'] 2021-10-25 09:34:16.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7043091, 7043717), (7043876, 7043945), (7044107, 7044208), (7044403, 7044459)] 2021-10-25 09:34:16.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261705: ['FBtr0303203'] 2021-10-25 09:34:16.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261705 has a single transcript. 2021-10-25 09:34:16.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066114: ['FBtr0070644'] 2021-10-25 09:34:16.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0066114 has a single transcript. 2021-10-25 09:34:16.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066292: ['FBtr0332945'] 2021-10-25 09:34:16.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0066292 has a single transcript. 2021-10-25 09:34:16.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261706: ['FBtr0303209'] 2021-10-25 09:34:16.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261706 has a single transcript. 2021-10-25 09:34:16.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19448746, 19451432), (19448746, 19449326)] 2021-10-25 09:34:16.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036728: ['FBtr0075222', 'FBtr0302509', 'FBtr0302510', 'FBtr0333691'] 2021-10-25 09:34:16.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066293: ['FBtr0086192'] 2021-10-25 09:34:16.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0066293 has a single transcript. 2021-10-25 09:34:16.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261707: ['FBtr0303211', 'FBtr0303212'] 2021-10-25 09:34:16.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066303: ['FBtr0091936', 'FBtr0346041'] 2021-10-25 09:34:16.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003268: ['FBtr0085795'] 2021-10-25 09:34:16.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003268 has a single transcript. 2021-10-25 09:34:16.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003270: ['FBtr0081081'] 2021-10-25 09:34:16.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003270 has a single transcript. 2021-10-25 09:34:16.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21606632, 21606795), (21607383, 21607506), (21607859, 21608531)] 2021-10-25 09:34:16.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003274: ['FBtr0087105'] 2021-10-25 09:34:16.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003274 has a single transcript. 2021-10-25 09:34:16.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9717763, 9717869), (9718006, 9718265), (9718520, 9720090), (9718520, 9722760), (9720165, 9722760), (9722942, 9727027), (9722954, 9727027), (9727256, 9732915), (9727256, 9732954), (9733532, 9742374), (9744226, 9746433), (9744230, 9746433), (9744230, 9746406)] 2021-10-25 09:34:16.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003275: ['FBtr0078787'] 2021-10-25 09:34:16.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11533194, 11533278), (11533693, 11533876)] 2021-10-25 09:34:16.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003275 has a single transcript. 2021-10-25 09:34:16.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033134: ['FBtr0089032'] 2021-10-25 09:34:16.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11532825, 11533693, 'FBtr0303211_exon_2') contains intron (11533194, 11533278) 2021-10-25 09:34:16.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033134 has a single transcript. 2021-10-25 09:34:16.443 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303211_exon_2'] 2021-10-25 09:34:16.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19744681, 19744754)] 2021-10-25 09:34:16.445 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284244: ['FBtr0305556'] 2021-10-25 09:34:16.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284244 has a single transcript. 2021-10-25 09:34:16.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003277: ['FBtr0073542'] 2021-10-25 09:34:16.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003277 has a single transcript. 2021-10-25 09:34:16.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033135: ['FBtr0089034', 'FBtr0329936'] 2021-10-25 09:34:16.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003278: ['FBtr0078054'] 2021-10-25 09:34:16.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003278 has a single transcript. 2021-10-25 09:34:16.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284245: ['FBtr0088035', 'FBtr0331927', 'FBtr0345022', 'FBtr0345023'] 2021-10-25 09:34:16.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003279: ['FBtr0085248'] 2021-10-25 09:34:16.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003279 has a single transcript. 2021-10-25 09:34:16.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003285: ['FBtr0070562', 'FBtr0343758'] 2021-10-25 09:34:16.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17474834, 17474893), (17474834, 17474922), (17475135, 17475409), (17475594, 17475650)] 2021-10-25 09:34:16.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7052995, 7053062), (7053236, 7053300), (7053456, 7053526), (7053721, 7053847)] 2021-10-25 09:34:16.503 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.504 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066304: ['FBtr0091935', 'FBtr0346040'] 2021-10-25 09:34:16.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261709: ['FBtr0303215'] 2021-10-25 09:34:16.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261709 has a single transcript. 2021-10-25 09:34:16.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261710: ['FBtr0332953', 'FBtr0307488', 'FBtr0071460', 'FBtr0071461'] 2021-10-25 09:34:16.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2954530, 2954652), (2955201, 2955540), (2955643, 2955947), (2956178, 2957056), (2957257, 2957460), (2957959, 2965978), (2966080, 2973400)] 2021-10-25 09:34:16.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040031: ['FBtr0333740', 'FBtr0332625'] 2021-10-25 09:34:16.547 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19744681, 19744754)] 2021-10-25 09:34:16.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.548 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.559 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11891244, 11893554), (11891465, 11893554), (11892184, 11893554)] 2021-10-25 09:34:16.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.560 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033136: ['FBtr0089035'] 2021-10-25 09:34:16.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033136 has a single transcript. 2021-10-25 09:34:16.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033137: ['FBtr0089062', 'FBtr0336874'] 2021-10-25 09:34:16.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003292: ['FBtr0076146'] 2021-10-25 09:34:16.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003292 has a single transcript. 2021-10-25 09:34:16.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23036190, 23041207), (23036190, 23044000), (23041426, 23044000), (23044188, 23044261), (23044445, 23046172), (23046544, 23047295)] 2021-10-25 09:34:16.586 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003295: ['FBtr0072681'] 2021-10-25 09:34:16.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003295 has a single transcript. 2021-10-25 09:34:16.604 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10465055, 10465142), (10465067, 10465142), (10465247, 10465584), (10471538, 10471617), (10471783, 10471879), (10472143, 10473327), (10472143, 10473425), (10472143, 10473168), (10472143, 10474052)] 2021-10-25 09:34:16.605 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003300: ['FBtr0077279', 'FBtr0304593', 'FBtr0345922'] 2021-10-25 09:34:16.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7056279, 7056336), (7056746, 7056813), (7057173, 7057242), (7057416, 7057475)] 2021-10-25 09:34:16.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0066365: ['FBtr0073341', 'FBtr0073342', 'FBtr0073343'] 2021-10-25 09:34:16.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028707: ['FBtr0110911', 'FBtr0342603'] 2021-10-25 09:34:16.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036729: ['FBtr0075225'] 2021-10-25 09:34:16.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036729 has a single transcript. 2021-10-25 09:34:16.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040038: ['FBtr0113685', 'FBtr0113686'] 2021-10-25 09:34:16.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036730: ['FBtr0075223', 'FBtr0310051'] 2021-10-25 09:34:16.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033138: ['FBtr0089060'] 2021-10-25 09:34:16.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033138 has a single transcript. 2021-10-25 09:34:16.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033139: ['FBtr0089036'] 2021-10-25 09:34:16.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033139 has a single transcript. 2021-10-25 09:34:16.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12096646, 12096695)] 2021-10-25 09:34:16.674 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.674 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033140: ['FBtr0347153'] 2021-10-25 09:34:16.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033140 has a single transcript. 2021-10-25 09:34:16.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20691012, 20694110), (20695392, 20695810), (20695401, 20695810)] 2021-10-25 09:34:16.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033141: ['FBtr0300063', 'FBtr0345466'] 2021-10-25 09:34:16.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4296291, 4298529), (4298770, 4307357), (4298770, 4299343), (4298770, 4299004), (4299092, 4299343)] 2021-10-25 09:34:16.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(53542, 56890), (56827, 56890), (57267, 57319), (57604, 57658), (57923, 83718), (83841, 83901)] 2021-10-25 09:34:16.691 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.692 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17479251, 17479307)] 2021-10-25 09:34:16.693 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.694 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284246: ['FBtr0086023', 'FBtr0302508'] 2021-10-25 09:34:16.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028708: ['FBtr0081969', 'FBtr0336757'] 2021-10-25 09:34:16.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7073143, 7073200)] 2021-10-25 09:34:16.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040045: ['FBtr0307117'] 2021-10-25 09:34:16.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040045 has a single transcript. 2021-10-25 09:34:16.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036731: ['FBtr0075224', 'FBtr0302208'] 2021-10-25 09:34:16.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6075000, 6075063), (6076114, 6076170)] 2021-10-25 09:34:16.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040056: ['FBtr0111166', 'FBtr0333912', 'FBtr0333913', 'FBtr0333914'] 2021-10-25 09:34:16.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9048755, 9050953), (9051127, 9051186)] 2021-10-25 09:34:16.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261714: ['FBtr0082548', 'FBtr0082547'] 2021-10-25 09:34:16.797 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17480968, 17481483), (17482123, 17482204), (17482302, 17486190)] 2021-10-25 09:34:16.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17480128, 17482123, 'FBtr0302208_exon_3') contains intron (17480968, 17481483) 2021-10-25 09:34:16.798 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302208_exon_3'] 2021-10-25 09:34:16.798 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033145: ['FBtr0112770'] 2021-10-25 09:34:16.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033145 has a single transcript. 2021-10-25 09:34:16.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067052: ['FBtr0071490'] 2021-10-25 09:34:16.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067052 has a single transcript. 2021-10-25 09:34:16.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003301: ['FBtr0073992', 'FBtr0340467', 'FBtr0305581', 'FBtr0333654', 'FBtr0333655', 'FBtr0333656', 'FBtr0333657'] 2021-10-25 09:34:16.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033149: ['FBtr0089045'] 2021-10-25 09:34:16.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033149 has a single transcript. 2021-10-25 09:34:16.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067102: ['FBtr0071755'] 2021-10-25 09:34:16.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067102 has a single transcript. 2021-10-25 09:34:16.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284247: ['FBtr0078045', 'FBtr0343249'] 2021-10-25 09:34:16.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033153: ['FBtr0089049'] 2021-10-25 09:34:16.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033153 has a single transcript. 2021-10-25 09:34:16.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12163555, 12163621), (12165673, 12166120)] 2021-10-25 09:34:16.816 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12162886, 12165673, 'FBtr0082548_exon_2') contains intron (12163555, 12163621) 2021-10-25 09:34:16.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082548_exon_2'] 2021-10-25 09:34:16.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067311: ['FBtr0081454'] 2021-10-25 09:34:16.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067311 has a single transcript. 2021-10-25 09:34:16.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033154: ['FBtr0089022'] 2021-10-25 09:34:16.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033154 has a single transcript. 2021-10-25 09:34:16.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067312: ['FBtr0081453'] 2021-10-25 09:34:16.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067312 has a single transcript. 2021-10-25 09:34:16.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033155: ['FBtr0089021', 'FBtr0345370'] 2021-10-25 09:34:16.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028717: ['FBtr0084935', 'FBtr0084936', 'FBtr0084937', 'FBtr0339160', 'FBtr0339161', 'FBtr0339162'] 2021-10-25 09:34:16.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067317: ['FBtr0347600', 'FBtr0336879'] 2021-10-25 09:34:16.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23738184, 23740160), (23738184, 23746189), (23741084, 23746189), (23746544, 23747872), (23746544, 23747758), (23747812, 23747872), (23748060, 23748423), (23748060, 23748139), (23748373, 23748423), (23748716, 23748771)] 2021-10-25 09:34:16.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(644314, 644436), (645716, 647988), (648361, 648478), (648886, 648990), (649765, 649933), (650293, 652785), (653288, 654246), (654700, 655273), (655866, 656711), (657384, 705870), (707867, 714274)] 2021-10-25 09:34:16.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036732: ['FBtr0075173', 'FBtr0302041', 'FBtr0345117', 'FBtr0345118'] 2021-10-25 09:34:16.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7274889, 7275085), (7275357, 7275413), (7276672, 7276738)] 2021-10-25 09:34:16.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.886 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21868161, 21868314)] 2021-10-25 09:34:16.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261722: ['FBtr0075541', 'FBtr0075542', 'FBtr0075543'] 2021-10-25 09:34:16.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284248: ['FBtr0080889', 'FBtr0344849'] 2021-10-25 09:34:16.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067407: ['FBtr0085225'] 2021-10-25 09:34:16.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067407 has a single transcript. 2021-10-25 09:34:16.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033158: ['FBtr0088963', 'FBtr0345800'] 2021-10-25 09:34:16.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17487189, 17488064), (17487200, 17488064), (17487659, 17488064), (17488332, 17501444), (17501478, 17507624), (17509304, 17509445), (17509809, 17510143), (17510328, 17510390), (17510534, 17510598), (17510775, 17510913)] 2021-10-25 09:34:16.946 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17487633, 17488332, 'FBtr0345118_exon_1') contains intron (17487659, 17488064) 2021-10-25 09:34:16.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345118_exon_1'] 2021-10-25 09:34:16.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15810848, 15811219), (15810848, 15813245), (15812241, 15813245), (15812897, 15813245), (15813353, 15813418), (15813626, 15815935), (15816056, 15816273)] 2021-10-25 09:34:16.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067622: ['FBtr0091657', 'FBtr0331643'] 2021-10-25 09:34:16.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.948 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25888696, 25889654), (25888891, 25889654), (25889065, 25889654), (25890278, 25890702), (25890278, 25890717), (25892034, 25892448), (25892067, 25892448)] 2021-10-25 09:34:16.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16719976, 16722008)] 2021-10-25 09:34:16.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14790112, 14790180), (14790878, 14793473), (14790878, 14793125), (14790878, 14791247), (14792353, 14793125), (14792428, 14793473), (14792428, 14793125), (14794152, 14794214), (14794389, 14794460), (14794827, 14794960), (14795201, 14795274), (14795385, 14795445), (14795585, 14795648), (14796122, 14797291), (14796122, 14798874), (14797522, 14798874), (14799165, 14799280), (14799584, 14799949), (14800077, 14800150), (14800885, 14801142), (14801422, 14824788), (14801422, 14818600), (14824927, 14825745), (14824927, 14825961)] 2021-10-25 09:34:16.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7311503, 7311931), (7312111, 7312175), (7312451, 7312506)] 2021-10-25 09:34:16.987 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:16.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10403556, 10403729), (10403828, 10403890), (10403932, 10403992), (10404550, 10404610), (10404754, 10404828)] 2021-10-25 09:34:16.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:16.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040060: ['FBtr0077038'] 2021-10-25 09:34:17.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040060 has a single transcript. 2021-10-25 09:34:17.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040063: ['FBtr0072050', 'FBtr0072051'] 2021-10-25 09:34:17.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284249: ['FBtr0086111', 'FBtr0086112', 'FBtr0086113', 'FBtr0330252'] 2021-10-25 09:34:17.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067628: ['FBtr0082998'] 2021-10-25 09:34:17.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067628 has a single transcript. 2021-10-25 09:34:17.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23244601, 23244651), (23244759, 23244816), (23244885, 23245346)] 2021-10-25 09:34:17.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23244816, 23245399, 'FBtr0072050_exon_1') contains intron (23244885, 23245346) 2021-10-25 09:34:17.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072050_exon_1'] 2021-10-25 09:34:17.050 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067629: ['FBtr0082999'] 2021-10-25 09:34:17.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067629 has a single transcript. 2021-10-25 09:34:17.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261723: ['FBtr0290136'] 2021-10-25 09:34:17.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261723 has a single transcript. 2021-10-25 09:34:17.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067779: ['FBtr0078100', 'FBtr0306536', 'FBtr0306537', 'FBtr0306538', 'FBtr0306539'] 2021-10-25 09:34:17.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261786: ['FBtr0072058'] 2021-10-25 09:34:17.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261786 has a single transcript. 2021-10-25 09:34:17.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261787: ['FBtr0081403'] 2021-10-25 09:34:17.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261787 has a single transcript. 2021-10-25 09:34:17.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036733: ['FBtr0075209'] 2021-10-25 09:34:17.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036733 has a single transcript. 2021-10-25 09:34:17.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040064: ['FBtr0079876'] 2021-10-25 09:34:17.112 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040064 has a single transcript. 2021-10-25 09:34:17.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036734: ['FBtr0075175', 'FBtr0344941', 'FBtr0331842', 'FBtr0345387'] 2021-10-25 09:34:17.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6662436, 6662568), (6662448, 6662568), (6662757, 6666719), (6667013, 6667072)] 2021-10-25 09:34:17.120 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6662269, 6662757, 'FBtr0086112_exon_1') contains intron (6662436, 6662568) 2021-10-25 09:34:17.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040066: ['FBtr0070438', 'FBtr0308566'] 2021-10-25 09:34:17.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086112_exon_1'] 2021-10-25 09:34:17.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261788: ['FBtr0344222', 'FBtr0344223', 'FBtr0344224', 'FBtr0334060', 'FBtr0334061', 'FBtr0334062', 'FBtr0303123', 'FBtr0303119', 'FBtr0303113', 'FBtr0303115', 'FBtr0303121', 'FBtr0303117', 'FBtr0303122', 'FBtr0303118', 'FBtr0303124', 'FBtr0303112', 'FBtr0303114', 'FBtr0303120', 'FBtr0303111', 'FBtr0303125'] 2021-10-25 09:34:17.137 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086111': ['FBtr0330252']} 2021-10-25 09:34:17.138 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330252']] 2021-10-25 09:34:17.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2586549, 2586760), (2587386, 2587440)] 2021-10-25 09:34:17.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(66612, 66675), (67003, 67388), (67111, 67388), (67137, 67388), (67507, 67568), (67762, 67891), (68023, 68084), (70549, 70606)] 2021-10-25 09:34:17.175 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (67042, 67507, 'FBtr0078100_exon_1') contains intron (67111, 67388) 2021-10-25 09:34:17.176 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (67042, 67507, 'FBtr0306536_exon_1') contains intron (67111, 67388) 2021-10-25 09:34:17.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078100_exon_1', 'FBtr0306536_exon_1'] 2021-10-25 09:34:17.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17515752, 17524523)] 2021-10-25 09:34:17.208 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17514297, 17524740, 'FBtr0345387_exon_1') contains intron (17515752, 17524523) 2021-10-25 09:34:17.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345387_exon_1'] 2021-10-25 09:34:17.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040068: ['FBtr0074677', 'FBtr0074678', 'FBtr0113316', 'FBtr0333759'] 2021-10-25 09:34:17.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028734: ['FBtr0082199', 'FBtr0082200', 'FBtr0082196', 'FBtr0082197', 'FBtr0082198', 'FBtr0301386', 'FBtr0347104', 'FBtr0347105', 'FBtr0308123', 'FBtr0335048', 'FBtr0335049'] 2021-10-25 09:34:17.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284250: ['FBtr0302926', 'FBtr0302927'] 2021-10-25 09:34:17.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003302: ['FBtr0070889', 'FBtr0307288'] 2021-10-25 09:34:17.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033159: ['FBtr0111079', 'FBtr0111080', 'FBtr0111074', 'FBtr0111075', 'FBtr0111076', 'FBtr0111077', 'FBtr0111078', 'FBtr0111069', 'FBtr0111070', 'FBtr0111071', 'FBtr0111072', 'FBtr0111073', 'FBtr0111064', 'FBtr0111101', 'FBtr0111065', 'FBtr0111066', 'FBtr0111067', 'FBtr0111068', 'FBtr0111060', 'FBtr0089016', 'FBtr0089018', 'FBtr0089019', 'FBtr0089020', 'FBtr0111061', 'FBtr0111102', 'FBtr0111062', 'FBtr0111081', 'FBtr0111082', 'FBtr0111083', 'FBtr0111084', 'FBtr0111085', 'FBtr0111087', 'FBtr0111088', 'FBtr0111089', 'FBtr0111092', 'FBtr0111094', 'FBtr0111096', 'FBtr0111097', 'FBtr0111098', 'FBtr0111099', 'FBtr0111100', 'FBtr0111049', 'FBtr0111050', 'FBtr0111051', 'FBtr0111052', 'FBtr0111053', 'FBtr0111054', 'FBtr0111055', 'FBtr0111056', 'FBtr0111057', 'FBtr0111058', 'FBtr0111059', 'FBtr0111063', 'FBtr0306767', 'FBtr0306768', 'FBtr0306769', 'FBtr0306770', 'FBtr0306771', 'FBtr0306772', 'FBtr0306773', 'FBtr0306774', 'FBtr0306775', 'FBtr0306776', 'FBtr0306777', 'FBtr0306778', 'FBtr0306779', 'FBtr0306780', 'FBtr0306781', 'FBtr0306782', 'FBtr0306783', 'FBtr0306784', 'FBtr0306785', 'FBtr0306786', 'FBtr0306787', 'FBtr0334801'] 2021-10-25 09:34:17.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6036978, 6037068), (6037118, 6037757)] 2021-10-25 09:34:17.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14436160, 14442257), (14442593, 14449402), (14449531, 14460043), (14458829, 14460043), (14460471, 14461963), (14462106, 14462182)] 2021-10-25 09:34:17.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19262593, 19263132), (19263314, 19263880), (19263955, 19269256), (19263955, 19264684), (19265306, 19269483), (19265308, 19269256), (19269365, 19269483), (19269651, 19269720), (19270550, 19270621), (19270999, 19271072), (19271225, 19271282), (19271454, 19271518)] 2021-10-25 09:34:17.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003308: ['FBtr0082704'] 2021-10-25 09:34:17.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003308 has a single transcript. 2021-10-25 09:34:17.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003310: ['FBtr0077993', 'FBtr0077994'] 2021-10-25 09:34:17.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284251: ['FBtr0114615'] 2021-10-25 09:34:17.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284251 has a single transcript. 2021-10-25 09:34:17.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036735: ['FBtr0075208'] 2021-10-25 09:34:17.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036735 has a single transcript. 2021-10-25 09:34:17.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067782: ['FBtr0090034'] 2021-10-25 09:34:17.372 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067782 has a single transcript. 2021-10-25 09:34:17.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284252: ['FBtr0072347', 'FBtr0072348', 'FBtr0072349'] 2021-10-25 09:34:17.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036738: ['FBtr0075181', 'FBtr0345386'] 2021-10-25 09:34:17.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067783: ['FBtr0089480', 'FBtr0089481', 'FBtr0089482', 'FBtr0344280', 'FBtr0344281', 'FBtr0344282'] 2021-10-25 09:34:17.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1052265, 1052330), (1052495, 1052565), (1053053, 1061233), (1062213, 1077651), (1062213, 1076834)] 2021-10-25 09:34:17.401 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.401 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:17.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24510439, 24510496), (24510793, 24510853), (24513171, 24514535), (24514870, 24515230)] 2021-10-25 09:34:17.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040069: ['FBtr0070879'] 2021-10-25 09:34:17.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040069 has a single transcript. 2021-10-25 09:34:17.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040070: ['FBtr0079839', 'FBtr0079840'] 2021-10-25 09:34:17.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003312: ['FBtr0082475'] 2021-10-25 09:34:17.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003312 has a single transcript. 2021-10-25 09:34:17.467 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10103602, 10103672), (10103747, 10104288), (10104218, 10104288), (10104796, 10104878), (10104989, 10105059), (10104989, 10105068), (10105010, 10105059), (10105010, 10105068), (10105369, 10105433), (10105501, 10105558), (10105724, 10105789), (10106113, 10107429), (10107479, 10108229), (10107479, 10108694), (10108911, 10108975), (10109067, 10109523), (10109071, 10109815)] 2021-10-25 09:34:17.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003313: ['FBtr0080237', 'FBtr0308136'] 2021-10-25 09:34:17.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.469 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.498 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082196': ['FBtr0335048'], 'FBtr0082198': ['FBtr0308123']} 2021-10-25 09:34:17.499 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0335048'], ['FBtr0308123']] 2021-10-25 09:34:17.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036740: ['FBtr0075201', 'FBtr0333123'] 2021-10-25 09:34:17.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11485031, 11485180), (11485754, 11486081), (11486221, 11486291)] 2021-10-25 09:34:17.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9613375, 9613432), (9613540, 9615301), (9615448, 9615531)] 2021-10-25 09:34:17.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17620357, 17620418), (17620649, 17620728), (17620894, 17621100), (17621252, 17621309)] 2021-10-25 09:34:17.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20553056, 20553126), (20553310, 20553569), (20553313, 20553569), (20553835, 20553895), (20554199, 20554252), (20554199, 20554705), (20554199, 20557406), (20554919, 20557406), (20554919, 20556484), (20556688, 20557406)] 2021-10-25 09:34:17.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284253: ['FBtr0077562', 'FBtr0345640'] 2021-10-25 09:34:17.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040071: ['FBtr0083257', 'FBtr0083258'] 2021-10-25 09:34:17.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003317: ['FBtr0088832', 'FBtr0088833', 'FBtr0308825'] 2021-10-25 09:34:17.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036741: ['FBtr0075182', 'FBtr0333121'] 2021-10-25 09:34:17.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3511026, 3511087), (3512328, 3512384), (3512843, 3512902), (3513474, 3513541), (3514377, 3514529)] 2021-10-25 09:34:17.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7656203, 7656374), (7656203, 7661980), (7656203, 7663258), (7656203, 7662470), (7661506, 7661980), (7661506, 7663258), (7661506, 7662470), (7662253, 7662470), (7662256, 7662470), (7662298, 7663258), (7662298, 7662470), (7662890, 7663258), (7663324, 7663692), (7663324, 7666165), (7663324, 7696643), (7665982, 7666165), (7693855, 7696643), (7696724, 7696779), (7696878, 7696937), (7699373, 7699485), (7700324, 7700388), (7700548, 7703845), (7704050, 7705702), (7705914, 7705972), (7706379, 7706460), (7706743, 7707627), (7706743, 7707888), (7707720, 7707888), (7708816, 7709146), (7709350, 7709518), (7710283, 7710348), (7710801, 7710867), (7710969, 7716167), (7710969, 7717366), (7710969, 7713137)] 2021-10-25 09:34:17.634 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.634 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16226439, 16256777), (16243329, 16256777)] 2021-10-25 09:34:17.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.666 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17622493, 17626107), (17626397, 17626492), (17626632, 17626692), (17627024, 17627086), (17627252, 17627314), (17627554, 17627612), (17627804, 17627864), (17628018, 17628278), (17628347, 17628426), (17628371, 17628426), (17628799, 17628859), (17629234, 17629289), (17629415, 17629784)] 2021-10-25 09:34:17.667 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7806598, 7807071), (7807012, 7807071), (7807201, 7807315), (7807201, 7807568), (7807351, 7807568), (7807644, 7807707), (7808366, 7808509), (7808920, 7808981), (7809207, 7809269)] 2021-10-25 09:34:17.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.684 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284254: ['FBtr0087278'] 2021-10-25 09:34:17.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284254 has a single transcript. 2021-10-25 09:34:17.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284255: ['FBtr0079200'] 2021-10-25 09:34:17.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284255 has a single transcript. 2021-10-25 09:34:17.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284256: ['FBtr0081087'] 2021-10-25 09:34:17.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284256 has a single transcript. 2021-10-25 09:34:17.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040074: ['FBtr0075375'] 2021-10-25 09:34:17.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040074 has a single transcript. 2021-10-25 09:34:17.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284257: ['FBtr0086724', 'FBtr0113360', 'FBtr0113361'] 2021-10-25 09:34:17.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040075: ['FBtr0074988', 'FBtr0344993', 'FBtr0331852'] 2021-10-25 09:34:17.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036742: ['FBtr0300284', 'FBtr0345385'] 2021-10-25 09:34:17.775 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19255383, 19255441)] 2021-10-25 09:34:17.776 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19255339, 19257111, 'FBtr0074988_exon_1') contains intron (19255383, 19255441) 2021-10-25 09:34:17.776 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19255339, 19257046, 'FBtr0331852_exon_1') contains intron (19255383, 19255441) 2021-10-25 09:34:17.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074988_exon_1', 'FBtr0331852_exon_1'] 2021-10-25 09:34:17.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17633945, 17636318), (17636535, 17636692), (17636885, 17636945), (17637301, 17637442)] 2021-10-25 09:34:17.781 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.781 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003319: ['FBtr0083250', 'FBtr0344008'] 2021-10-25 09:34:17.788 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18430885, 18431172), (18431357, 18431415), (18431746, 18431808), (18432022, 18432444), (18432581, 18432646), (18432775, 18437574), (18432775, 18436596), (18436728, 18437574), (18437612, 18437939), (18437977, 18438207), (18438275, 18439734)] 2021-10-25 09:34:17.789 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18430736, 18431357, 'FBtr0086724_exon_9') contains intron (18430885, 18431172) 2021-10-25 09:34:17.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086724_exon_9'] 2021-10-25 09:34:17.790 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067861: ['FBtr0089604', 'FBtr0310275'] 2021-10-25 09:34:17.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028737: ['FBtr0332947', 'FBtr0345627'] 2021-10-25 09:34:17.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16116559, 16132226), (16128880, 16132226), (16132944, 16139824), (16139887, 16140582), (16141182, 16141378), (16141572, 16141664), (16141990, 16142685), (16143115, 16143629), (16143819, 16143894), (16144192, 16144422), (16144572, 16144627)] 2021-10-25 09:34:17.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20174764, 20174931), (20174864, 20174931), (20175854, 20176237), (20176390, 20177818), (20176414, 20178269), (20177851, 20178269), (20178397, 20178465)] 2021-10-25 09:34:17.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.846 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036745: ['FBtr0075184'] 2021-10-25 09:34:17.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036745 has a single transcript. 2021-10-25 09:34:17.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036746: ['FBtr0075196', 'FBtr0330162', 'FBtr0345384'] 2021-10-25 09:34:17.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040076: ['FBtr0091746'] 2021-10-25 09:34:17.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040076 has a single transcript. 2021-10-25 09:34:17.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16868391, 16868490)] 2021-10-25 09:34:17.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040077: ['FBtr0091747', 'FBtr0091748'] 2021-10-25 09:34:17.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003321: ['FBtr0073411'] 2021-10-25 09:34:17.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003321 has a single transcript. 2021-10-25 09:34:17.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067864: ['FBtr0072779', 'FBtr0301625', 'FBtr0072781'] 2021-10-25 09:34:17.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13710153, 13710308), (13710658, 13710722), (13711027, 13711218), (13711571, 13711644)] 2021-10-25 09:34:17.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003326: ['FBtr0087855', 'FBtr0087856'] 2021-10-25 09:34:17.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028738: ['FBtr0072426'] 2021-10-25 09:34:17.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17664646, 17668106)] 2021-10-25 09:34:17.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028738 has a single transcript. 2021-10-25 09:34:17.920 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028740: ['FBtr0089556'] 2021-10-25 09:34:17.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028740 has a single transcript. 2021-10-25 09:34:17.930 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330162': ['FBtr0345384']} 2021-10-25 09:34:17.931 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0345384']] 2021-10-25 09:34:17.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028741: ['FBtr0089555', 'FBtr0089554'] 2021-10-25 09:34:17.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12781392, 12784348), (12784742, 12799259), (12799790, 12799991)] 2021-10-25 09:34:17.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1798923, 1799009), (1798923, 1798981), (1798953, 1799009), (1800699, 1800759)] 2021-10-25 09:34:17.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040078: ['FBtr0082226'] 2021-10-25 09:34:17.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040078 has a single transcript. 2021-10-25 09:34:17.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036747: ['FBtr0075195'] 2021-10-25 09:34:17.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036747 has a single transcript. 2021-10-25 09:34:17.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040079: ['FBtr0080826'] 2021-10-25 09:34:17.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040079 has a single transcript. 2021-10-25 09:34:17.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17775435, 17775492), (17775654, 17775716), (17775874, 17775933), (17776096, 17776157), (17778152, 17778212), (17780469, 17780600), (17781279, 17781340), (17781487, 17781769)] 2021-10-25 09:34:17.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:17.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:17.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036749: ['FBtr0075187', 'FBtr0333692'] 2021-10-25 09:34:17.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284408: ['FBtr0342805', 'FBtr0342806', 'FBtr0342807', 'FBtr0342808', 'FBtr0342809', 'FBtr0342810', 'FBtr0342811', 'FBtr0342812', 'FBtr0342813', 'FBtr0342814', 'FBtr0342815', 'FBtr0342816', 'FBtr0342817', 'FBtr0342818', 'FBtr0342819', 'FBtr0342820', 'FBtr0342821', 'FBtr0342822', 'FBtr0342823', 'FBtr0342824', 'FBtr0342825', 'FBtr0342826'] 2021-10-25 09:34:17.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040080: ['FBtr0085189'] 2021-10-25 09:34:17.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040080 has a single transcript. 2021-10-25 09:34:18.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040087: ['FBtr0071089', 'FBtr0340162'] 2021-10-25 09:34:18.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003328: ['FBtr0087369', 'FBtr0087370'] 2021-10-25 09:34:18.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:18.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:18.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028743: ['FBtr0301142', 'FBtr0340279'] 2021-10-25 09:34:18.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15249483, 15254045), (15253010, 15254045), (15255036, 15255121), (15255224, 15255285), (15255870, 15255932), (15256062, 15256232), (15256595, 15256663), (15257546, 15257610)] 2021-10-25 09:34:18.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067903: ['FBtr0091694', 'FBtr0343266'] 2021-10-25 09:34:18.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036750: ['FBtr0075194'] 2021-10-25 09:34:18.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036750 has a single transcript. 2021-10-25 09:34:18.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17794550, 17795118), (17795428, 17797053), (17795428, 17795595), (17795604, 17797053), (17797131, 17797201), (17797263, 17797327), (17797616, 17797684), (17798287, 17798938)] 2021-10-25 09:34:18.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036751: ['FBtr0075193'] 2021-10-25 09:34:18.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036751 has a single transcript. 2021-10-25 09:34:18.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036752: ['FBtr0075190', 'FBtr0075191'] 2021-10-25 09:34:18.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23601482, 23601550), (23601620, 23601673)] 2021-10-25 09:34:18.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040089: ['FBtr0074812', 'FBtr0301703', 'FBtr0339435', 'FBtr0339436'] 2021-10-25 09:34:18.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003330: ['FBtr0085245'] 2021-10-25 09:34:18.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003330 has a single transcript. 2021-10-25 09:34:18.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003334: ['FBtr0082102', 'FBtr0306008'] 2021-10-25 09:34:18.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028744: ['FBtr0089550'] 2021-10-25 09:34:18.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028744 has a single transcript. 2021-10-25 09:34:18.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17753079, 17753134), (17753317, 17753466), (17754421, 17764061), (17754425, 17764061)] 2021-10-25 09:34:18.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.151 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028746: ['FBtr0070543', 'FBtr0345708'] 2021-10-25 09:34:18.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0067905: ['FBtr0100038'] 2021-10-25 09:34:18.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0067905 has a single transcript. 2021-10-25 09:34:18.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069056: ['FBtr0308585'] 2021-10-25 09:34:18.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0069056 has a single transcript. 2021-10-25 09:34:18.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069242: ['FBtr0082098'] 2021-10-25 09:34:18.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0069242 has a single transcript. 2021-10-25 09:34:18.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069354: ['FBtr0080184', 'FBtr0332030'] 2021-10-25 09:34:18.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9634475, 9634536), (9635568, 9635633), (9636551, 9636609)] 2021-10-25 09:34:18.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3172987, 3173044)] 2021-10-25 09:34:18.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19707464, 19707535), (19707604, 19708151), (19709149, 19711944), (19712267, 19712863), (19712267, 19712473), (19712267, 19712386), (19712267, 19712961), (19712540, 19712961)] 2021-10-25 09:34:18.205 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19712386, 19713045, 'FBtr0301703_exon_1') contains intron (19712540, 19712961) 2021-10-25 09:34:18.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301703_exon_1'] 2021-10-25 09:34:18.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036754: ['FBtr0075170'] 2021-10-25 09:34:18.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036754 has a single transcript. 2021-10-25 09:34:18.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036756: ['FBtr0075167', 'FBtr0333693'] 2021-10-25 09:34:18.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10846218, 10846281), (10846506, 10846572), (10846904, 10846963)] 2021-10-25 09:34:18.241 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10846572, 10847044, 'FBtr0080184_exon_1') contains intron (10846904, 10846963) 2021-10-25 09:34:18.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080184_exon_1'] 2021-10-25 09:34:18.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003339: ['FBtr0081657', 'FBtr0081658'] 2021-10-25 09:34:18.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028789: ['FBtr0076522', 'FBtr0331548'] 2021-10-25 09:34:18.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17809879, 17809936), (17810276, 17810335), (17810494, 17810582), (17810713, 17810785), (17810999, 17814059), (17810999, 17812795)] 2021-10-25 09:34:18.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6825689, 6841234), (6842214, 6849544), (6842214, 6847915)] 2021-10-25 09:34:18.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9041630, 9042032), (9041897, 9042032), (9042198, 9043387), (9043655, 9043723), (9043861, 9044344)] 2021-10-25 09:34:18.295 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.296 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069913: ['FBtr0301624'] 2021-10-25 09:34:18.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0069913 has a single transcript. 2021-10-25 09:34:18.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036757: ['FBtr0273392'] 2021-10-25 09:34:18.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036757 has a single transcript. 2021-10-25 09:34:18.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069923: ['FBtr0301812'] 2021-10-25 09:34:18.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0069923 has a single transcript. 2021-10-25 09:34:18.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069938: ['FBtr0111194'] 2021-10-25 09:34:18.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0069938 has a single transcript. 2021-10-25 09:34:18.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036759: ['FBtr0075162', 'FBtr0347063'] 2021-10-25 09:34:18.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069969: ['FBtr0308892', 'FBtr0308894', 'FBtr0344186', 'FBtr0344187', 'FBtr0302340'] 2021-10-25 09:34:18.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028833: ['FBtr0084976'] 2021-10-25 09:34:18.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028833 has a single transcript. 2021-10-25 09:34:18.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040091: ['FBtr0071934', 'FBtr0345505'] 2021-10-25 09:34:18.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028836: ['FBtr0088742'] 2021-10-25 09:34:18.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028836 has a single transcript. 2021-10-25 09:34:18.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17839982, 17840035), (17840723, 17841286)] 2021-10-25 09:34:18.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028837: ['FBtr0084265'] 2021-10-25 09:34:18.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028837 has a single transcript. 2021-10-25 09:34:18.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003345: ['FBtr0074099', 'FBtr0074100', 'FBtr0074101', 'FBtr0112824', 'FBtr0112825', 'FBtr0112826', 'FBtr0112827', 'FBtr0340115', 'FBtr0301543', 'FBtr0301544', 'FBtr0310311', 'FBtr0310312', 'FBtr0310313', 'FBtr0308128', 'FBtr0308129', 'FBtr0308130', 'FBtr0308131', 'FBtr0308132', 'FBtr0308133', 'FBtr0308134', 'FBtr0346799'] 2021-10-25 09:34:18.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028838: ['FBtr0080671'] 2021-10-25 09:34:18.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028838 has a single transcript. 2021-10-25 09:34:18.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22643286, 22643342), (22643430, 22643491), (22643653, 22643804)] 2021-10-25 09:34:18.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028841: ['FBtr0080859', 'FBtr0340233'] 2021-10-25 09:34:18.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036760: ['FBtr0075161'] 2021-10-25 09:34:18.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036760 has a single transcript. 2021-10-25 09:34:18.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16366570, 16366634)] 2021-10-25 09:34:18.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036761: ['FBtr0075160', 'FBtr0345815'] 2021-10-25 09:34:18.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040092: ['FBtr0301706'] 2021-10-25 09:34:18.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040092 has a single transcript. 2021-10-25 09:34:18.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040093: ['FBtr0088476'] 2021-10-25 09:34:18.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040093 has a single transcript. 2021-10-25 09:34:18.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(926682, 926734), (926902, 926971), (927127, 927185), (927297, 927355), (927570, 949870), (927570, 929050), (927570, 927780), (929292, 946775), (929292, 949870), (929292, 951126), (946843, 949870), (949946, 951126)] 2021-10-25 09:34:18.452 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040096: ['FBtr0113317'] 2021-10-25 09:34:18.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040096 has a single transcript. 2021-10-25 09:34:18.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040097: ['FBtr0079816'] 2021-10-25 09:34:18.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040097 has a single transcript. 2021-10-25 09:34:18.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040098: ['FBtr0079715'] 2021-10-25 09:34:18.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040098 has a single transcript. 2021-10-25 09:34:18.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17844714, 17844779), (17844894, 17845753)] 2021-10-25 09:34:18.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040099: ['FBtr0308065', 'FBtr0343418'] 2021-10-25 09:34:18.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028844: ['FBtr0300837'] 2021-10-25 09:34:18.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028844 has a single transcript. 2021-10-25 09:34:18.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261789: ['FBtr0081737'] 2021-10-25 09:34:18.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261789 has a single transcript. 2021-10-25 09:34:18.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028847: ['FBtr0080579', 'FBtr0343664'] 2021-10-25 09:34:18.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261790: ['FBtr0079560'] 2021-10-25 09:34:18.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261790 has a single transcript. 2021-10-25 09:34:18.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261791: ['FBtr0074377', 'FBtr0112993'] 2021-10-25 09:34:18.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2471194, 2472951), (2473099, 2473174), (2473591, 2473659), (2474360, 2474429), (2475355, 2475415), (2475688, 2475823), (2476029, 2480733), (2476029, 2478422), (2476029, 2477476), (2477809, 2478422), (2478506, 2480733), (2480908, 2481069), (2481319, 2481416), (2481876, 2481996), (2482391, 2482458), (2482636, 2483123), (2483386, 2483485), (2484089, 2484332), (2484513, 2484616), (2484759, 2486926), (2484759, 2486056), (2486242, 2486926), (2488013, 2488080), (2490317, 2490455), (2490842, 2491318), (2490842, 2491144), (2491234, 2491318), (2491412, 2491480), (2491614, 2492345), (2492420, 2492987), (2492420, 2492654), (2492885, 2492987), (2493215, 2494403), (2493215, 2499210), (2493215, 2501626), (2493215, 2493550), (2493676, 2494403), (2494637, 2498021), (2494637, 2495040), (2494637, 2499210), (2494637, 2501626), (2494637, 2496775), (2495238, 2496775), (2495238, 2495947), (2495238, 2495611), (2495728, 2495947), (2495728, 2499210), (2496033, 2496460), (2496593, 2496775), (2496925, 2497317), (2497488, 2498021), (2498115, 2498482), (2498631, 2499210), (2498631, 2501626), (2499678, 2500236), (2499678, 2501626), (2500362, 2501118), (2500362, 2500562), (2500676, 2500770), (2500902, 2501118), (2501241, 2501626), (2501737, 2505129), (2501737, 2521533), (2501737, 2513642), (2513802, 2517513), (2521788, 2522223), (2522421, 2523404), (2522421, 2522951), (2523071, 2523404), (2523529, 2523638), (2523568, 2523638), (2523816, 2523885), (2524402, 2544464), (2544762, 2545382)] 2021-10-25 09:34:18.535 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2476258, 2480908, 'FBtr0342823_exon_25') contains intron (2477809, 2478422) 2021-10-25 09:34:18.537 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342823_exon_25'] 2021-10-25 09:34:18.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13723010, 13723068), (13723475, 13723531), (13723484, 13723531)] 2021-10-25 09:34:18.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036762: ['FBtr0075140', 'FBtr0331810'] 2021-10-25 09:34:18.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:18.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16640030, 16640092), (16640240, 16640305)] 2021-10-25 09:34:18.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17847238, 17847546), (17848074, 17848137), (17849016, 17849079)] 2021-10-25 09:34:18.586 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028848: ['FBtr0310273', 'FBtr0305567'] 2021-10-25 09:34:18.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040102: ['FBtr0077469'] 2021-10-25 09:34:18.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040102 has a single transcript. 2021-10-25 09:34:18.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040104: ['FBtr0077539'] 2021-10-25 09:34:18.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040104 has a single transcript. 2021-10-25 09:34:18.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261792: ['FBtr0083720'] 2021-10-25 09:34:18.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261792 has a single transcript. 2021-10-25 09:34:18.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040106: ['FBtr0308305'] 2021-10-25 09:34:18.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040106 has a single transcript. 2021-10-25 09:34:18.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13708895, 13708970), (13708895, 13708948)] 2021-10-25 09:34:18.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040107: ['FBtr0077998'] 2021-10-25 09:34:18.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040107 has a single transcript. 2021-10-25 09:34:18.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261793: ['FBtr0333750', 'FBtr0330105', 'FBtr0330106', 'FBtr0300577', 'FBtr0112927', 'FBtr0333811'] 2021-10-25 09:34:18.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036763: ['FBtr0075141', 'FBtr0331811'] 2021-10-25 09:34:18.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0069973: ['FBtr0111189', 'FBtr0111190', 'FBtr0392906'] 2021-10-25 09:34:18.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040153: ['FBtr0073927', 'FBtr0333428', 'FBtr0333429'] 2021-10-25 09:34:18.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17850098, 17850160), (17850588, 17850776)] 2021-10-25 09:34:18.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028850: ['FBtr0300846'] 2021-10-25 09:34:18.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028850 has a single transcript. 2021-10-25 09:34:18.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028852: ['FBtr0080733'] 2021-10-25 09:34:18.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028852 has a single transcript. 2021-10-25 09:34:18.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028853: ['FBtr0080729'] 2021-10-25 09:34:18.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028853 has a single transcript. 2021-10-25 09:34:18.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22961460, 22961763)] 2021-10-25 09:34:18.712 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22961168, 22962360, 'FBtr0111190_exon_1') contains intron (22961460, 22961763) 2021-10-25 09:34:18.712 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111190_exon_1'] 2021-10-25 09:34:18.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14205381, 14206361), (14206466, 14206596), (14206775, 14210433)] 2021-10-25 09:34:18.717 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14203960, 14206466, 'FBtr0333429_exon_3') contains intron (14205381, 14206361) 2021-10-25 09:34:18.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333429_exon_3'] 2021-10-25 09:34:18.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028855: ['FBtr0080656', 'FBtr0343706', 'FBtr0302946'] 2021-10-25 09:34:18.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036764: ['FBtr0075159', 'FBtr0273277'] 2021-10-25 09:34:18.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8409341, 8410281), (8409364, 8410276), (8409364, 8410281), (8410689, 8423183), (8410689, 8418350), (8418426, 8423183), (8421655, 8423183), (8423575, 8423727), (8423669, 8423727), (8424035, 8424096), (8424312, 8424375), (8424315, 8424375), (8427887, 8427946), (8428205, 8428276), (8429415, 8429475), (8429592, 8429658)] 2021-10-25 09:34:18.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8429475, 8430195, 'FBtr0330105_exon_8') contains intron (8429592, 8429658) 2021-10-25 09:34:18.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8429475, 8433011, 'FBtr0330106_exon_10') contains intron (8429592, 8429658) 2021-10-25 09:34:18.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8429475, 8433011, 'FBtr0300577_exon_9') contains intron (8429592, 8429658) 2021-10-25 09:34:18.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8429475, 8430195, 'FBtr0112927_exon_10') contains intron (8429592, 8429658) 2021-10-25 09:34:18.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8429475, 8430195, 'FBtr0333811_exon_8') contains intron (8429592, 8429658) 2021-10-25 09:34:18.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330105_exon_8', 'FBtr0330106_exon_10', 'FBtr0300577_exon_9', 'FBtr0112927_exon_10', 'FBtr0333811_exon_8'] 2021-10-25 09:34:18.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17853099, 17853168), (17853954, 17854008), (17854269, 17854339), (17854707, 17856645), (17854707, 17855432)] 2021-10-25 09:34:18.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14712586, 14712642), (14712753, 14712824)] 2021-10-25 09:34:18.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040206: ['FBtr0085877', 'FBtr0305268'] 2021-10-25 09:34:18.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082582: ['FBtr0085659', 'FBtr0085660', 'FBtr0085661', 'FBtr0085663', 'FBtr0085658', 'FBtr0113483', 'FBtr0302600', 'FBtr0302601', 'FBtr0336446', 'FBtr0336447', 'FBtr0306685', 'FBtr0306686', 'FBtr0306687', 'FBtr0085662', 'FBtr0302110', 'FBtr0302111', 'FBtr0302112'] 2021-10-25 09:34:18.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036765: ['FBtr0075142', 'FBtr0300281', 'FBtr0300282'] 2021-10-25 09:34:18.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15804487, 15805557), (15804913, 15805557), (15805177, 15805557), (15806321, 15819595), (15812271, 15813848), (15812271, 15819595), (15812438, 15813848), (15812438, 15819595), (15812438, 15813600), (15812530, 15819595), (15812530, 15813600), (15812530, 15813551), (15812530, 15813848), (15812530, 15813735), (15812534, 15813600), (15813602, 15813735), (15813606, 15813848), (15813606, 15819595), (15814295, 15819595), (15815730, 15819595), (15818518, 15819595), (15819723, 15819995), (15820134, 15820422), (15820553, 15821008), (15820553, 15823186), (15821773, 15823186), (15823227, 15823292), (15823227, 15823307), (15823482, 15823618), (15823681, 15823751), (15823924, 15824041), (15824276, 15824334)] 2021-10-25 09:34:18.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15813600, 15814295, 'FBtr0301544_exon_2') contains intron (15813602, 15813735) 2021-10-25 09:34:18.850 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15813600, 15814295, 'FBtr0310313_exon_2') contains intron (15813602, 15813735) 2021-10-25 09:34:18.851 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15813600, 15814295, 'FBtr0308131_exon_2') contains intron (15813602, 15813735) 2021-10-25 09:34:18.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301544_exon_2', 'FBtr0310313_exon_2', 'FBtr0308131_exon_2'] 2021-10-25 09:34:18.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(32049869, 32051268)] 2021-10-25 09:34:18.859 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.859 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028856: ['FBtr0300064', 'FBtr0300065', 'FBtr0300614'] 2021-10-25 09:34:18.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17879248, 17879976), (17879248, 17879949), (17879248, 17879877), (17880064, 17880129), (17880297, 17880352), (17880512, 17880581), (17880808, 17881047), (17881470, 17881800)] 2021-10-25 09:34:18.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040207: ['FBtr0074246', 'FBtr0074247', 'FBtr0340443'] 2021-10-25 09:34:18.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15957972, 15958030), (15957975, 15958030), (15958132, 15958185), (15958584, 15958698), (15959027, 15959096)] 2021-10-25 09:34:18.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:18.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16267715, 16267774), (16267849, 16267913), (16268003, 16268071), (16268202, 16268273), (16268205, 16268273), (16269341, 16269978), (16270114, 16270238), (16270580, 16274283), (16274501, 16274563), (16274691, 16275532), (16275753, 16276115)] 2021-10-25 09:34:18.987 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:18.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036766: ['FBtr0075157'] 2021-10-25 09:34:19.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036766 has a single transcript. 2021-10-25 09:34:19.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261794: ['FBtr0343299', 'FBtr0343300', 'FBtr0343301', 'FBtr0072136', 'FBtr0072138', 'FBtr0072137', 'FBtr0072139'] 2021-10-25 09:34:19.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036767: ['FBtr0290228'] 2021-10-25 09:34:19.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036767 has a single transcript. 2021-10-25 09:34:19.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036768: ['FBtr0075143'] 2021-10-25 09:34:19.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036768 has a single transcript. 2021-10-25 09:34:19.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036769: ['FBtr0075154', 'FBtr0075155'] 2021-10-25 09:34:19.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028857: ['FBtr0300613'] 2021-10-25 09:34:19.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028857 has a single transcript. 2021-10-25 09:34:19.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028858: ['FBtr0080800', 'FBtr0343725', 'FBtr0305563'] 2021-10-25 09:34:19.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17892282, 17892356), (17892653, 17892716), (17892812, 17893030), (17893222, 17893299), (17893386, 17895030), (17893386, 17893451), (17893556, 17895030), (17895212, 17895765)] 2021-10-25 09:34:19.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040208: ['FBtr0078827', 'FBtr0334909'] 2021-10-25 09:34:19.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7320764, 7321582), (7320764, 7322559), (7321649, 7322559), (7322718, 7322775), (7322956, 7323021), (7323332, 7324569), (7323332, 7323818), (7323968, 7324581), (7324728, 7326616), (7324737, 7326616), (7324737, 7326151), (7326364, 7329288), (7326784, 7329288), (7329455, 7329512), (7329689, 7329742), (7329851, 7329916), (7330600, 7330658), (7330814, 7330975), (7332202, 7332260), (7332380, 7337088), (7332380, 7340944), (7332380, 7340544), (7332380, 7338249), (7332380, 7336116), (7332380, 7339782), (7332380, 7345060), (7332380, 7341707), (7332380, 7333686), (7332380, 7342582), (7332380, 7344278), (7332380, 7337871), (7332380, 7341327), (7332380, 7346641), (7332380, 7347391), (7332380, 7335715), (7332380, 7340154), (7332380, 7342963), (7332380, 7334387), (7332380, 7339027), (7332380, 7339402), (7332380, 7343331), (7332380, 7345875), (7332380, 7345484), (7332380, 7346268), (7332380, 7344663), (7332380, 7347006), (7332380, 7342103), (7332380, 7343717), (7332380, 7337493), (7332380, 7338640), (7332380, 7334933), (7332380, 7336530), (7333980, 7347848), (7334666, 7347848), (7335218, 7347848), (7336003, 7347848), (7336410, 7347848), (7336818, 7347848), (7337376, 7347848), (7337781, 7347848), (7338159, 7347848), (7338537, 7347848), (7338928, 7347848), (7339315, 7347848), (7339690, 7347848), (7340070, 7347848), (7340442, 7347848), (7340832, 7347848), (7341232, 7347848), (7341618, 7347848), (7341995, 7347848), (7342391, 7347848), (7342881, 7347848), (7343248, 7347848), (7343622, 7347848), (7344008, 7347848), (7344569, 7347848), (7344954, 7347848), (7345351, 7347848), (7345775, 7347848), (7346166, 7347848), (7346556, 7347848), (7346929, 7347848), (7347294, 7347848), (7347697, 7347848), (7348010, 7348130), (7348975, 7350957), (7348975, 7354685), (7348975, 7354276), (7348975, 7353565), (7348975, 7354056), (7348975, 7350157), (7348975, 7358806), (7348975, 7355290), (7348975, 7354881), (7348975, 7359441), (7348975, 7356744), (7348975, 7356106), (7348975, 7353244), (7348975, 7360081), (7348975, 7350373), (7348975, 7356972), (7348975, 7356316), (7348975, 7354476), (7348975, 7355900), (7348975, 7357788), (7348975, 7358215), (7348975, 7353815), (7348975, 7358428), (7348975, 7351173), (7348975, 7359221), (7348975, 7355685), (7348975, 7357399), (7348975, 7357182), (7348975, 7356526), (7348975, 7355086), (7348975, 7352898), (7348975, 7359015), (7348975, 7358002), (7348975, 7349600), (7348975, 7360290), (7348975, 7349984), (7348975, 7351915), (7348975, 7349392), (7348975, 7351460), (7348975, 7351698), (7348975, 7359874), (7348975, 7359666), (7348975, 7349787), (7348975, 7350580), (7348975, 7350781), (7348975, 7360525), (7348975, 7358603), (7348975, 7357590), (7349513, 7361717), (7349721, 7361717), (7349911, 7361717), (7350108, 7361717), (7350281, 7361717), (7350497, 7361717), (7350704, 7361717), (7350905, 7361717), (7351081, 7361717), (7351297, 7361717), (7351584, 7361717), (7351822, 7361717), (7352039, 7361717), (7353022, 7361717), (7353365, 7361717), (7353692, 7361717), (7353936, 7361717), (7354177, 7361717), (7354400, 7361717), (7354600, 7361717), (7354809, 7361717), (7355005, 7361717), (7355210, 7361717), (7355414, 7361717), (7355809, 7361717), (7356024, 7361717), (7356230, 7361717), (7356440, 7361717), (7356650, 7361717), (7356868, 7361717), (7357096, 7361717), (7357306, 7361717), (7357523, 7361717), (7357714, 7361717), (7357915, 7361717), (7358129, 7361717), (7358339, 7361717), (7358546, 7361717), (7358727, 7361717), (7358930, 7361717), (7359139, 7361717), (7359345, 7361717), (7359565, 7361717), (7359790, 7361717), (7360007, 7361717), (7360205, 7361717), (7360414, 7361717), (7360649, 7361717), (7361867, 7364177), (7361867, 7366465), (7361867, 7363594), (7361867, 7363331), (7361867, 7363880), (7361867, 7365017), (7361867, 7364455), (7361867, 7364731), (7361867, 7366804), (7361867, 7363023), (7361867, 7365311), (7361867, 7365942), (7363194, 7368387), (7363490, 7368387), (7363765, 7368387), (7364048, 7368387), (7364348, 7368387), (7364617, 7368387), (7364893, 7368387), (7365179, 7368387), (7365482, 7368387), (7366104, 7368387), (7366627, 7368387), (7366966, 7368387), (7368732, 7377533), (7377714, 7381470)] 2021-10-25 09:34:19.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5228190, 5228276), (5228836, 5229706), (5229828, 5230021), (5230625, 5230992), (5231214, 5232056), (5231313, 5232056)] 2021-10-25 09:34:19.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036770: ['FBtr0075153'] 2021-10-25 09:34:19.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036770 has a single transcript. 2021-10-25 09:34:19.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15980162, 15980832)] 2021-10-25 09:34:19.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036771: ['FBtr0075144'] 2021-10-25 09:34:19.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036771 has a single transcript. 2021-10-25 09:34:19.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036772: ['FBtr0075152'] 2021-10-25 09:34:19.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036772 has a single transcript. 2021-10-25 09:34:19.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036773: ['FBtr0075137', 'FBtr0333698'] 2021-10-25 09:34:19.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040211: ['FBtr0080201'] 2021-10-25 09:34:19.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040211 has a single transcript. 2021-10-25 09:34:19.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040212: ['FBtr0084897', 'FBtr0330374', 'FBtr0330375'] 2021-10-25 09:34:19.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23908247, 23908473), (23908631, 23909677), (23909809, 23911676), (23909833, 23911676), (23910507, 23911390), (23910823, 23911390), (23911551, 23911676), (23911868, 23912187), (23912321, 23912383), (23912466, 23912531), (23912634, 23912728), (23912834, 23912896), (23913026, 23913085), (23913204, 23913267), (23913486, 23913541), (23913698, 23913757), (23914017, 23914078), (23914331, 23921964), (23922327, 23922391), (23922578, 23922640), (23922856, 23922921), (23923029, 23924001), (23923029, 23923339), (23923029, 23924415), (23923393, 23924001), (23924094, 23924415), (23924549, 23924615), (23924755, 23924817)] 2021-10-25 09:34:19.215 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23908150, 23908631, 'FBtr0072137_exon_1') contains intron (23908247, 23908473) 2021-10-25 09:34:19.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072137_exon_1'] 2021-10-25 09:34:19.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.217 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30532644, 30533095), (30532644, 30533118), (30532661, 30533118), (30532982, 30533095), (30532982, 30533118), (30533507, 30571808), (30539440, 30571808), (30546587, 30548451), (30546587, 30548420), (30547167, 30548420), (30548749, 30571808), (30563481, 30571808), (30571429, 30571808), (30571961, 30572022), (30572535, 30572598), (30572850, 30572924), (30573072, 30578116), (30573072, 30575431), (30573072, 30577178), (30573072, 30574240), (30574526, 30576597), (30574526, 30578116), (30575948, 30577178), (30575948, 30576597), (30576818, 30577178), (30577558, 30578116)] 2021-10-25 09:34:19.218 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30532836, 30533507, 'FBtr0085659_exon_1') contains intron (30532982, 30533095) 2021-10-25 09:34:19.219 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30572924, 30576277, 'FBtr0336446_exon_5') contains intron (30573072, 30575431) 2021-10-25 09:34:19.221 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085659_exon_1', 'FBtr0336446_exon_5'] 2021-10-25 09:34:19.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18089642, 18089845), (18089946, 18090011), (18090176, 18090278), (18090386, 18090447), (18090610, 18105580), (18090610, 18099400), (18099486, 18105580)] 2021-10-25 09:34:19.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028862: ['FBtr0080707', 'FBtr0336859', 'FBtr0336860'] 2021-10-25 09:34:19.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25486936, 25486994), (25488271, 25488523), (25489103, 25490201), (25489103, 25490596)] 2021-10-25 09:34:19.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.278 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.289 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084897': ['FBtr0330375']} 2021-10-25 09:34:19.289 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330375']] 2021-10-25 09:34:19.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036774: ['FBtr0075121'] 2021-10-25 09:34:19.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036774 has a single transcript. 2021-10-25 09:34:19.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036775: ['FBtr0075136'] 2021-10-25 09:34:19.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036775 has a single transcript. 2021-10-25 09:34:19.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036777: ['FBtr0075123', 'FBtr0075124'] 2021-10-25 09:34:19.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15249566, 15250647), (15250888, 15251006), (15251287, 15251342), (15252390, 15252451), (15252794, 15252852), (15252794, 15253233)] 2021-10-25 09:34:19.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040227: ['FBtr0089622'] 2021-10-25 09:34:19.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040227 has a single transcript. 2021-10-25 09:34:19.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18113181, 18119771), (18113181, 18119790)] 2021-10-25 09:34:19.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040228: ['FBtr0080693'] 2021-10-25 09:34:19.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040228 has a single transcript. 2021-10-25 09:34:19.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040230: ['FBtr0075505', 'FBtr0332133'] 2021-10-25 09:34:19.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036778: ['FBtr0075135', 'FBtr0332863'] 2021-10-25 09:34:19.408 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15827096, 15827945), (15828051, 15828318), (15829037, 15829185), (15829877, 15830015), (15830205, 15830270), (15830458, 15830578)] 2021-10-25 09:34:19.409 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15830270, 15832004, 'FBtr0075505_exon_6') contains intron (15830458, 15830578) 2021-10-25 09:34:19.409 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075505_exon_6'] 2021-10-25 09:34:19.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028863: ['FBtr0344773', 'FBtr0344774', 'FBtr0344775', 'FBtr0344776', 'FBtr0344777', 'FBtr0344778', 'FBtr0344779', 'FBtr0344780'] 2021-10-25 09:34:19.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18130510, 18130570), (18131130, 18131437)] 2021-10-25 09:34:19.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040232: ['FBtr0332202', 'FBtr0332203', 'FBtr0332204', 'FBtr0332205'] 2021-10-25 09:34:19.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261797: ['FBtr0273370', 'FBtr0073359', 'FBtr0332745', 'FBtr0332746', 'FBtr0332747', 'FBtr0332748', 'FBtr0332749', 'FBtr0332750'] 2021-10-25 09:34:19.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036780: ['FBtr0075127', 'FBtr0332861'] 2021-10-25 09:34:19.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18149253, 18150676), (18150890, 18153186)] 2021-10-25 09:34:19.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.572 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11261448, 11261510), (11261454, 11261510), (11262004, 11262062), (11262180, 11262243), (11262420, 11262485), (11262429, 11262485), (11262560, 11262616), (11262751, 11262818), (11266557, 11266881), (11266557, 11267150), (11267046, 11267150), (11268052, 11268105), (11268452, 11268509), (11268632, 11268707)] 2021-10-25 09:34:19.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.573 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15648028, 15648094), (15648251, 15648309), (15648465, 15648534), (15649020, 15649081), (15649343, 15649413), (15649518, 15650172), (15649518, 15649698), (15649731, 15650172), (15650405, 15650496), (15650702, 15650765), (15650979, 15651053), (15651761, 15651816), (15652098, 15652346), (15652820, 15698580), (15652820, 15663583), (15663694, 15672957), (15673039, 15679127), (15679343, 15682683), (15679343, 15679620), (15679700, 15682683), (15698691, 15707954), (15708036, 15714124), (15714340, 15714617), (15714340, 15717680), (15714697, 15717680)] 2021-10-25 09:34:19.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284409: ['FBtr0452188'] 2021-10-25 09:34:19.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284409 has a single transcript. 2021-10-25 09:34:19.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036781: ['FBtr0075134'] 2021-10-25 09:34:19.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036781 has a single transcript. 2021-10-25 09:34:19.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284410: ['FBtr0452189'] 2021-10-25 09:34:19.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284410 has a single transcript. 2021-10-25 09:34:19.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036782: ['FBtr0310156'] 2021-10-25 09:34:19.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036782 has a single transcript. 2021-10-25 09:34:19.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284411: ['FBtr0452191'] 2021-10-25 09:34:19.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284411 has a single transcript. 2021-10-25 09:34:19.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284412: ['FBtr0452190'] 2021-10-25 09:34:19.658 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284412 has a single transcript. 2021-10-25 09:34:19.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036783: ['FBtr0075129'] 2021-10-25 09:34:19.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036783 has a single transcript. 2021-10-25 09:34:19.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284413: ['FBtr0452192'] 2021-10-25 09:34:19.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284413 has a single transcript. 2021-10-25 09:34:19.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036784: ['FBtr0075132'] 2021-10-25 09:34:19.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036784 has a single transcript. 2021-10-25 09:34:19.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284414: ['FBtr0452193'] 2021-10-25 09:34:19.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284414 has a single transcript. 2021-10-25 09:34:19.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284415: ['FBtr0452182'] 2021-10-25 09:34:19.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284415 has a single transcript. 2021-10-25 09:34:19.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4807832, 4807891), (4811490, 4811551), (4811669, 4812893), (4811669, 4812056), (4812255, 4813327), (4813089, 4813327), (4815436, 4815492), (4816645, 4816704), (4816645, 4816986), (4816731, 4816986), (4821042, 4821110), (4821266, 4821427), (4821266, 4821863), (4821466, 4821863), (4821969, 4822022), (4822626, 4822689), (4823524, 4823586), (4824161, 4825327)] 2021-10-25 09:34:19.686 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036785: ['FBtr0299605', 'FBtr0332864', 'FBtr0332865', 'FBtr0332866'] 2021-10-25 09:34:19.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284416: ['FBtr0452183'] 2021-10-25 09:34:19.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284416 has a single transcript. 2021-10-25 09:34:19.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284417: ['FBtr0452184'] 2021-10-25 09:34:19.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284417 has a single transcript. 2021-10-25 09:34:19.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284418: ['FBtr0452185'] 2021-10-25 09:34:19.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284418 has a single transcript. 2021-10-25 09:34:19.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284419: ['FBtr0452186'] 2021-10-25 09:34:19.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284419 has a single transcript. 2021-10-25 09:34:19.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003346: ['FBtr0081234', 'FBtr0334174', 'FBtr0334175'] 2021-10-25 09:34:19.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284420: ['FBtr0452187'] 2021-10-25 09:34:19.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284420 has a single transcript. 2021-10-25 09:34:19.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040233: ['FBtr0091678', 'FBtr0344016', 'FBtr0344017'] 2021-10-25 09:34:19.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284421: ['FBtr0078192', 'FBtr0078193', 'FBtr0114517', 'FBtr0333478', 'FBtr0333479'] 2021-10-25 09:34:19.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18298844, 18298894), (18299013, 18299073), (18299389, 18299439), (18299511, 18299605), (18299650, 18299732), (18299765, 18299822), (18299765, 18299831), (18299768, 18299822), (18299768, 18299831), (18299915, 18299968), (18300619, 18300691), (18300774, 18300834)] 2021-10-25 09:34:19.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11270042, 11270117), (11270240, 11270297), (11270644, 11270697), (11271533, 11272684), (11272291, 11272496), (11272291, 11272684), (11272618, 11272684), (11276075, 11276136), (11276337, 11276398), (11276548, 11276604), (11276856, 11276920), (11277196, 11277254), (11277375, 11277440)] 2021-10-25 09:34:19.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19442255, 19445208), (19442255, 19444951), (19445285, 19445344), (19446026, 19446096), (19446598, 19446675), (19446852, 19446908)] 2021-10-25 09:34:19.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20432707, 20432796), (20432707, 20432766), (20433006, 20433071), (20433310, 20433377), (20433587, 20433640), (20433861, 20433933), (20434032, 20434086), (20434245, 20434547), (20434302, 20434547), (20434344, 20434547), (20434712, 20434780)] 2021-10-25 09:34:19.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040234: ['FBtr0071321', 'FBtr0334929'] 2021-10-25 09:34:19.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003353: ['FBtr0072169', 'FBtr0072170', 'FBtr0343342'] 2021-10-25 09:34:19.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082585: ['FBtr0088146'] 2021-10-25 09:34:19.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082585 has a single transcript. 2021-10-25 09:34:19.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036786: ['FBtr0075119'] 2021-10-25 09:34:19.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036786 has a single transcript. 2021-10-25 09:34:19.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9319684, 9320084), (9319684, 9319816), (9319867, 9320084), (9320512, 9320586), (9320907, 9320966), (9321538, 9321602), (9323714, 9323767), (9324202, 9324259)] 2021-10-25 09:34:19.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082598: ['FBtr0076848', 'FBtr0076849', 'FBtr0302543', 'FBtr0302544', 'FBtr0302545', 'FBtr0332730'] 2021-10-25 09:34:19.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036787: ['FBtr0075117'] 2021-10-25 09:34:19.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036787 has a single transcript. 2021-10-25 09:34:19.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028864: ['FBtr0080756'] 2021-10-25 09:34:19.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028864 has a single transcript. 2021-10-25 09:34:19.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036789: ['FBtr0089387', 'FBtr0346968', 'FBtr0330088', 'FBtr0332867'] 2021-10-25 09:34:19.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24047548, 24047615), (24048003, 24049422), (24049247, 24049422), (24049283, 24049422), (24050297, 24050362), (24050606, 24050658), (24050729, 24050791), (24050902, 24050962), (24051117, 24051173), (24051294, 24051356), (24051477, 24051540), (24051659, 24051716), (24051771, 24051836), (24051972, 24052029), (24052169, 24052394), (24052588, 24052654), (24052749, 24052801)] 2021-10-25 09:34:19.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:19.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:19.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028866: ['FBtr0080687'] 2021-10-25 09:34:19.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028866 has a single transcript. 2021-10-25 09:34:19.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028867: ['FBtr0100604'] 2021-10-25 09:34:19.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028867 has a single transcript. 2021-10-25 09:34:19.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028868: ['FBtr0080672'] 2021-10-25 09:34:19.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028868 has a single transcript. 2021-10-25 09:34:20.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028870: ['FBtr0080670'] 2021-10-25 09:34:20.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028870 has a single transcript. 2021-10-25 09:34:20.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040235: ['FBtr0071324'] 2021-10-25 09:34:20.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040235 has a single transcript. 2021-10-25 09:34:20.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028871: ['FBtr0080633'] 2021-10-25 09:34:20.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028871 has a single transcript. 2021-10-25 09:34:20.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040236: ['FBtr0071326', 'FBtr0343368'] 2021-10-25 09:34:20.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261799: ['FBtr0075409'] 2021-10-25 09:34:20.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261799 has a single transcript. 2021-10-25 09:34:20.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028872: ['FBtr0080606', 'FBtr0343692', 'FBtr0303242'] 2021-10-25 09:34:20.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261800: ['FBtr0079490', 'FBtr0079491'] 2021-10-25 09:34:20.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284435: ['FBtr0100135', 'FBtr0100136', 'FBtr0340056', 'FBtr0340057', 'FBtr0345993', 'FBtr0345994'] 2021-10-25 09:34:20.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18487241, 18487454), (18487502, 18487715), (18488954, 18502214)] 2021-10-25 09:34:20.060 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.060 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9276267, 9276328), (9276431, 9276493), (9277384, 9277448), (9277652, 9277714), (9278189, 9278251), (9278897, 9278955), (9281387, 9281450), (9281628, 9282792)] 2021-10-25 09:34:20.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.072 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0089387': ['FBtr0330088'], 'FBtr0346968': ['FBtr0332867']} 2021-10-25 09:34:20.072 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330088'], ['FBtr0332867']] 2021-10-25 09:34:20.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003356: ['FBtr0085512'] 2021-10-25 09:34:20.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003356 has a single transcript. 2021-10-25 09:34:20.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7811772, 7814575), (7814400, 7814575), (7814651, 7814810), (7817656, 7817732), (7820400, 7820461)] 2021-10-25 09:34:20.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7370068, 7371706), (7370068, 7371731), (7370184, 7371706), (7370550, 7371706), (7371025, 7371706), (7372072, 7372162), (7372519, 7372580)] 2021-10-25 09:34:20.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003357: ['FBtr0085502', 'FBtr0346340'] 2021-10-25 09:34:20.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14029456, 14029654), (14029852, 14029910), (14030504, 14030688)] 2021-10-25 09:34:20.103 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14029261, 14029852, 'FBtr0080606_exon_3') contains intron (14029456, 14029654) 2021-10-25 09:34:20.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080606_exon_3'] 2021-10-25 09:34:20.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036790: ['FBtr0089578'] 2021-10-25 09:34:20.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036790 has a single transcript. 2021-10-25 09:34:20.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036791: ['FBtr0075101'] 2021-10-25 09:34:20.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036791 has a single transcript. 2021-10-25 09:34:20.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040237: ['FBtr0083276', 'FBtr0305998'] 2021-10-25 09:34:20.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:20.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036793: ['FBtr0344517', 'FBtr0344518', 'FBtr0344519'] 2021-10-25 09:34:20.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261801: ['FBtr0303270'] 2021-10-25 09:34:20.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261801 has a single transcript. 2021-10-25 09:34:20.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261802: ['FBtr0333742', 'FBtr0333743', 'FBtr0333744', 'FBtr0333745', 'FBtr0303271', 'FBtr0303272', 'FBtr0303273', 'FBtr0303274', 'FBtr0303275', 'FBtr0303276', 'FBtr0303277'] 2021-10-25 09:34:20.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16261926, 16261990), (16262189, 16262261), (16263086, 16263146), (16263621, 16263729), (16264016, 16264069)] 2021-10-25 09:34:20.179 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16263729, 16264095, 'FBtr0083276_exon_1') contains intron (16264016, 16264069) 2021-10-25 09:34:20.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083276_exon_1'] 2021-10-25 09:34:20.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(142244, 142869), (142315, 142869), (143519, 196274), (176404, 187568), (176404, 187571), (176404, 196274), (187609, 196274), (197415, 197476), (197652, 197714), (197988, 198051), (198346, 198433), (198549, 198609)] 2021-10-25 09:34:20.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003358: ['FBtr0085511'] 2021-10-25 09:34:20.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003358 has a single transcript. 2021-10-25 09:34:20.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028875: ['FBtr0080594', 'FBtr0300594', 'FBtr0309867'] 2021-10-25 09:34:20.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18600368, 18600428), (18600576, 18600638), (18601201, 18601263), (18601463, 18601512), (18601803, 18601855), (18602053, 18615490), (18602053, 18615740), (18615687, 18615740), (18615844, 18615999), (18616445, 18616726), (18617091, 18617147), (18617511, 18617610)] 2021-10-25 09:34:20.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003360: ['FBtr0073421', 'FBtr0073422', 'FBtr0073423', 'FBtr0073424', 'FBtr0346384'] 2021-10-25 09:34:20.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040238: ['FBtr0082183', 'FBtr0114590', 'FBtr0306023', 'FBtr0337020'] 2021-10-25 09:34:20.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14040221, 14041320), (14040394, 14041320), (14040465, 14041320), (14042234, 14060957), (14062075, 14062170), (14062621, 14068866), (14069006, 14076579), (14076915, 14077122), (14077198, 14080539), (14080734, 14081659), (14081746, 14083457), (14083567, 14087976), (14088128, 14088485), (14088608, 14088722), (14088861, 14089107), (14094292, 14094350)] 2021-10-25 09:34:20.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036795: ['FBtr0304702'] 2021-10-25 09:34:20.316 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036795 has a single transcript. 2021-10-25 09:34:20.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10782095, 10782172), (10782300, 10782379), (10782680, 10786805), (10782680, 10782776), (10782680, 10784350), (10782889, 10784350), (10782889, 10786805)] 2021-10-25 09:34:20.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082831: ['FBtr0082586', 'FBtr0304744'] 2021-10-25 09:34:20.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036796: ['FBtr0300052'] 2021-10-25 09:34:20.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036796 has a single transcript. 2021-10-25 09:34:20.327 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10162310, 10163198), (10162310, 10163032), (10163077, 10163198), (10163856, 10164718), (10163856, 10164574), (10164961, 10165018), (10165775, 10166123), (10166234, 10167248), (10167461, 10170191)] 2021-10-25 09:34:20.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036799: ['FBtr0100555', 'FBtr0344520', 'FBtr0332869'] 2021-10-25 09:34:20.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028878: ['FBtr0080704'] 2021-10-25 09:34:20.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028878 has a single transcript. 2021-10-25 09:34:20.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028879: ['FBtr0080702', 'FBtr0080703', 'FBtr0307486', 'FBtr0332180', 'FBtr0344791', 'FBtr0344792'] 2021-10-25 09:34:20.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12414286, 12414351), (12414756, 12414870), (12416582, 12416647), (12416588, 12416647), (12417129, 12417217), (12417392, 12417447), (12417975, 12418040), (12419981, 12420039), (12420175, 12420229), (12420426, 12420499), (12420662, 12420725)] 2021-10-25 09:34:20.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18600368, 18600428), (18600576, 18600638), (18601201, 18601263), (18601463, 18601512), (18601803, 18601855), (18602053, 18615490), (18602053, 18615740), (18615687, 18615740), (18615844, 18615999), (18616445, 18616726), (18617091, 18617147), (18617511, 18617610)] 2021-10-25 09:34:20.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284436: ['FBtr0088683'] 2021-10-25 09:34:20.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0284436 has a single transcript. 2021-10-25 09:34:20.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22131447, 22131502), (22131699, 22140718), (22134719, 22140718), (22135107, 22140718), (22140363, 22140718), (22140971, 22141594), (22141768, 22141833), (22141768, 22141830), (22144280, 22145670), (22146996, 22154797), (22153706, 22154797), (22155408, 22156620), (22156815, 22158512), (22156815, 22157022), (22156815, 22158491), (22157055, 22158512), (22158721, 22160189), (22158721, 22160207), (22158721, 22161677), (22160339, 22161677), (22160349, 22161677)] 2021-10-25 09:34:20.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22156620, 22157055, 'FBtr0303273_exon_7') contains intron (22156815, 22157022) 2021-10-25 09:34:20.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22158512, 22161348, 'FBtr0303274_exon_4') contains intron (22158721, 22160189) 2021-10-25 09:34:20.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303273_exon_7', 'FBtr0303274_exon_4'] 2021-10-25 09:34:20.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284442: ['FBtr0070762', 'FBtr0340476'] 2021-10-25 09:34:20.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082919: ['FBtr0113511'] 2021-10-25 09:34:20.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082919 has a single transcript. 2021-10-25 09:34:20.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082922: ['FBtr0113512'] 2021-10-25 09:34:20.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082922 has a single transcript. 2021-10-25 09:34:20.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082923: ['FBtr0113586'] 2021-10-25 09:34:20.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082923 has a single transcript. 2021-10-25 09:34:20.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082924: ['FBtr0113562'] 2021-10-25 09:34:20.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082924 has a single transcript. 2021-10-25 09:34:20.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040239: ['FBtr0077084'] 2021-10-25 09:34:20.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040239 has a single transcript. 2021-10-25 09:34:20.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082925: ['FBtr0113530'] 2021-10-25 09:34:20.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082925 has a single transcript. 2021-10-25 09:34:20.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5325355, 5325418), (5325652, 5325726), (5325652, 5325729)] 2021-10-25 09:34:20.480 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040250: ['FBtr0082373'] 2021-10-25 09:34:20.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040250 has a single transcript. 2021-10-25 09:34:20.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082926: ['FBtr0113504'] 2021-10-25 09:34:20.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082926 has a single transcript. 2021-10-25 09:34:20.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040251: ['FBtr0082378', 'FBtr0346101'] 2021-10-25 09:34:20.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082927: ['FBtr0113498'] 2021-10-25 09:34:20.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082927 has a single transcript. 2021-10-25 09:34:20.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082928: ['FBtr0113495'] 2021-10-25 09:34:20.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082928 has a single transcript. 2021-10-25 09:34:20.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082929: ['FBtr0113510'] 2021-10-25 09:34:20.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082929 has a single transcript. 2021-10-25 09:34:20.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15074866, 15075490), (15075879, 15087039), (15087292, 15087384), (15087755, 15087916), (15088209, 15088274), (15088430, 15090898), (15088430, 15089044), (15089110, 15090898), (15091034, 15091098), (15091229, 15091294), (15091576, 15091642), (15091972, 15092122), (15092485, 15092549), (15092641, 15092898), (15092641, 15093418), (15093036, 15093418), (15093683, 15094678), (15093683, 15094133), (15094232, 15094678), (15095177, 15095297), (15095443, 15095501)] 2021-10-25 09:34:20.513 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15074775, 15075879, 'FBtr0080702_exon_1') contains intron (15074866, 15075490) 2021-10-25 09:34:20.513 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15074775, 15075879, 'FBtr0080703_exon_1') contains intron (15074866, 15075490) 2021-10-25 09:34:20.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15074775, 15075879, 'FBtr0307486_exon_1') contains intron (15074866, 15075490) 2021-10-25 09:34:20.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080702_exon_1', 'FBtr0080703_exon_1', 'FBtr0307486_exon_1'] 2021-10-25 09:34:20.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082930: ['FBtr0113509'] 2021-10-25 09:34:20.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082930 has a single transcript. 2021-10-25 09:34:20.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003366: ['FBtr0073393'] 2021-10-25 09:34:20.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003366 has a single transcript. 2021-10-25 09:34:20.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036801: ['FBtr0075049', 'FBtr0331420', 'FBtr0331421', 'FBtr0331422'] 2021-10-25 09:34:20.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082931: ['FBtr0113508'] 2021-10-25 09:34:20.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082931 has a single transcript. 2021-10-25 09:34:20.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11153030, 11153233), (11153493, 11153558)] 2021-10-25 09:34:20.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082932: ['FBtr0113534'] 2021-10-25 09:34:20.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082932 has a single transcript. 2021-10-25 09:34:20.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082933: ['FBtr0113533'] 2021-10-25 09:34:20.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082933 has a single transcript. 2021-10-25 09:34:20.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0284444: ['FBtr0299835', 'FBtr0299836', 'FBtr0306849'] 2021-10-25 09:34:20.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003371: ['FBtr0070471', 'FBtr0070472', 'FBtr0070473', 'FBtr0070474', 'FBtr0070475', 'FBtr0070476', 'FBtr0070466', 'FBtr0070467', 'FBtr0070468', 'FBtr0070469', 'FBtr0070470', 'FBtr0112828', 'FBtr0301966', 'FBtr0302185', 'FBtr0331751', 'FBtr0331752', 'FBtr0331753'] 2021-10-25 09:34:20.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082934: ['FBtr0113532'] 2021-10-25 09:34:20.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082934 has a single transcript. 2021-10-25 09:34:20.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082935: ['FBtr0113531'] 2021-10-25 09:34:20.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082935 has a single transcript. 2021-10-25 09:34:20.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082936: ['FBtr0113558'] 2021-10-25 09:34:20.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082936 has a single transcript. 2021-10-25 09:34:20.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082937: ['FBtr0113557'] 2021-10-25 09:34:20.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082937 has a single transcript. 2021-10-25 09:34:20.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040252: ['FBtr0082340', 'FBtr0335217'] 2021-10-25 09:34:20.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082938: ['FBtr0113556'] 2021-10-25 09:34:20.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082938 has a single transcript. 2021-10-25 09:34:20.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082939: ['FBtr0113503'] 2021-10-25 09:34:20.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082939 has a single transcript. 2021-10-25 09:34:20.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082940: ['FBtr0113502'] 2021-10-25 09:34:20.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082940 has a single transcript. 2021-10-25 09:34:20.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082941: ['FBtr0113507'] 2021-10-25 09:34:20.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082941 has a single transcript. 2021-10-25 09:34:20.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(317395, 317464), (317411, 317464), (317656, 317719)] 2021-10-25 09:34:20.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18626076, 18626864), (18626291, 18626864), (18627031, 18661356), (18627031, 18652908), (18642363, 18661356), (18652949, 18661356), (18662043, 18662623), (18663326, 18663491), (18663617, 18663678), (18663754, 18664139), (18664260, 18664323), (18664820, 18666015), (18664820, 18665697)] 2021-10-25 09:34:20.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082942: ['FBtr0113497'] 2021-10-25 09:34:20.631 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082942 has a single transcript. 2021-10-25 09:34:20.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082943: ['FBtr0113496'] 2021-10-25 09:34:20.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082943 has a single transcript. 2021-10-25 09:34:20.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11175833, 11176183)] 2021-10-25 09:34:20.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082944: ['FBtr0113603'] 2021-10-25 09:34:20.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082944 has a single transcript. 2021-10-25 09:34:20.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082945: ['FBtr0113604'] 2021-10-25 09:34:20.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082945 has a single transcript. 2021-10-25 09:34:20.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082946: ['FBtr0113605'] 2021-10-25 09:34:20.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082946 has a single transcript. 2021-10-25 09:34:20.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082947: ['FBtr0113615'] 2021-10-25 09:34:20.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082947 has a single transcript. 2021-10-25 09:34:20.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082948: ['FBtr0113614'] 2021-10-25 09:34:20.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082948 has a single transcript. 2021-10-25 09:34:20.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082949: ['FBtr0113613'] 2021-10-25 09:34:20.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082949 has a single transcript. 2021-10-25 09:34:20.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082950: ['FBtr0113505'] 2021-10-25 09:34:20.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082950 has a single transcript. 2021-10-25 09:34:20.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040253: ['FBtr0308027'] 2021-10-25 09:34:20.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040253 has a single transcript. 2021-10-25 09:34:20.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082951: ['FBtr0113501'] 2021-10-25 09:34:20.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082951 has a single transcript. 2021-10-25 09:34:20.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040255: ['FBtr0082376'] 2021-10-25 09:34:20.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040255 has a single transcript. 2021-10-25 09:34:20.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082952: ['FBtr0113506'] 2021-10-25 09:34:20.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082952 has a single transcript. 2021-10-25 09:34:20.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040256: ['FBtr0113321'] 2021-10-25 09:34:20.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040256 has a single transcript. 2021-10-25 09:34:20.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040257: ['FBtr0082337'] 2021-10-25 09:34:20.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040257 has a single transcript. 2021-10-25 09:34:20.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285879: ['FBtr0074251', 'FBtr0310301', 'FBtr0310302', 'FBtr0310303'] 2021-10-25 09:34:20.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082953: ['FBtr0113609'] 2021-10-25 09:34:20.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082953 has a single transcript. 2021-10-25 09:34:20.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040259: ['FBtr0082338'] 2021-10-25 09:34:20.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040259 has a single transcript. 2021-10-25 09:34:20.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082954: ['FBtr0113580'] 2021-10-25 09:34:20.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082954 has a single transcript. 2021-10-25 09:34:20.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082957: ['FBtr0113592'] 2021-10-25 09:34:20.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082957 has a single transcript. 2021-10-25 09:34:20.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040260: ['FBtr0080911', 'FBtr0080912', 'FBtr0344850'] 2021-10-25 09:34:20.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082958: ['FBtr0113590'] 2021-10-25 09:34:20.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082958 has a single transcript. 2021-10-25 09:34:20.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082959: ['FBtr0113589'] 2021-10-25 09:34:20.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082959 has a single transcript. 2021-10-25 09:34:20.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036804: ['FBtr0113179'] 2021-10-25 09:34:20.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036804 has a single transcript. 2021-10-25 09:34:20.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028880: ['FBtr0300847', 'FBtr0305661'] 2021-10-25 09:34:20.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082960: ['FBtr0113587'] 2021-10-25 09:34:20.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082960 has a single transcript. 2021-10-25 09:34:20.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036805: ['FBtr0075092', 'FBtr0345383'] 2021-10-25 09:34:20.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082961: ['FBtr0113576'] 2021-10-25 09:34:20.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082961 has a single transcript. 2021-10-25 09:34:20.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082962: ['FBtr0113577'] 2021-10-25 09:34:20.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082962 has a single transcript. 2021-10-25 09:34:20.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082963: ['FBtr0113518'] 2021-10-25 09:34:20.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082963 has a single transcript. 2021-10-25 09:34:20.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082966: ['FBtr0113612'] 2021-10-25 09:34:20.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082966 has a single transcript. 2021-10-25 09:34:20.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15550629, 15550780), (15551038, 15551096)] 2021-10-25 09:34:20.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16799133, 16799680), (16799133, 16799660), (16800520, 16800599)] 2021-10-25 09:34:20.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082967: ['FBtr0113611'] 2021-10-25 09:34:20.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082967 has a single transcript. 2021-10-25 09:34:20.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18683808, 18683879)] 2021-10-25 09:34:20.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16121060, 16121268), (16123310, 16128893), (16123310, 16124162), (16123310, 16146863), (16129015, 16146863), (16147209, 16148741), (16147209, 16148917)] 2021-10-25 09:34:20.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.828 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16146863, 16148977, 'FBtr0310302_exon_1') contains intron (16147209, 16148741) 2021-10-25 09:34:20.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082968: ['FBtr0113523'] 2021-10-25 09:34:20.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082968 has a single transcript. 2021-10-25 09:34:20.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310302_exon_1'] 2021-10-25 09:34:20.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082969: ['FBtr0113521'] 2021-10-25 09:34:20.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082969 has a single transcript. 2021-10-25 09:34:20.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082970: ['FBtr0113519'] 2021-10-25 09:34:20.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082970 has a single transcript. 2021-10-25 09:34:20.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082971: ['FBtr0113517'] 2021-10-25 09:34:20.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082971 has a single transcript. 2021-10-25 09:34:20.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082972: ['FBtr0113516'] 2021-10-25 09:34:20.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082972 has a single transcript. 2021-10-25 09:34:20.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082973: ['FBtr0113601'] 2021-10-25 09:34:20.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082973 has a single transcript. 2021-10-25 09:34:20.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028882: ['FBtr0080644'] 2021-10-25 09:34:20.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028882 has a single transcript. 2021-10-25 09:34:20.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082974: ['FBtr0113593'] 2021-10-25 09:34:20.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082974 has a single transcript. 2021-10-25 09:34:20.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028884: ['FBtr0080816'] 2021-10-25 09:34:20.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028884 has a single transcript. 2021-10-25 09:34:20.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036806: ['FBtr0075091', 'FBtr0345812'] 2021-10-25 09:34:20.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082975: ['FBtr0113591'] 2021-10-25 09:34:20.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082975 has a single transcript. 2021-10-25 09:34:20.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082976: ['FBtr0113588'] 2021-10-25 09:34:20.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082976 has a single transcript. 2021-10-25 09:34:20.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028886: ['FBtr0080685', 'FBtr0080686', 'FBtr0300845'] 2021-10-25 09:34:20.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082978: ['FBtr0113578'] 2021-10-25 09:34:20.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082978 has a single transcript. 2021-10-25 09:34:20.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082979: ['FBtr0113579'] 2021-10-25 09:34:20.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082979 has a single transcript. 2021-10-25 09:34:20.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261803: ['FBtr0340474', 'FBtr0303278', 'FBtr0303279'] 2021-10-25 09:34:20.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082980: ['FBtr0309749'] 2021-10-25 09:34:20.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082980 has a single transcript. 2021-10-25 09:34:20.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040261: ['FBtr0080910'] 2021-10-25 09:34:20.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040261 has a single transcript. 2021-10-25 09:34:20.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18685691, 18685868)] 2021-10-25 09:34:20.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.934 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082981: ['FBtr0113494'] 2021-10-25 09:34:20.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082981 has a single transcript. 2021-10-25 09:34:20.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040262: ['FBtr0080909', 'FBtr0331620'] 2021-10-25 09:34:20.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082983: ['FBtr0113598'] 2021-10-25 09:34:20.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082983 has a single transcript. 2021-10-25 09:34:20.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2634025, 2641589), (2634025, 2634826), (2634025, 2641797), (2634025, 2634835), (2634178, 2641589), (2634254, 2641589), (2634871, 2641589), (2635031, 2641124), (2637553, 2641589), (2641361, 2641589), (2642093, 2645375), (2642093, 2669912), (2643732, 2669912), (2643732, 2669633), (2645279, 2669912), (2645279, 2645375), (2645414, 2669912), (2645418, 2649735), (2646871, 2659147), (2649739, 2669912), (2658869, 2659147), (2661093, 2669912), (2661093, 2669633), (2667839, 2668165), (2668831, 2669633), (2669753, 2669912), (2670103, 2670173), (2670257, 2671307), (2670257, 2671120), (2671231, 2671307), (2671545, 2671628), (2671822, 2672066), (2671822, 2672913), (2672123, 2672913), (2673103, 2673174), (2673618, 2677100), (2673618, 2673905), (2673618, 2674596), (2674921, 2677100)] 2021-10-25 09:34:20.952 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2658765, 2661093, 'FBtr0070471_exon_1') contains intron (2658869, 2659147) 2021-10-25 09:34:20.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082986: ['FBtr0113585'] 2021-10-25 09:34:20.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082986 has a single transcript. 2021-10-25 09:34:20.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070471_exon_1'] 2021-10-25 09:34:20.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082987: ['FBtr0113515'] 2021-10-25 09:34:20.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082987 has a single transcript. 2021-10-25 09:34:20.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14845361, 14845416), (14845693, 14845752), (14846494, 14846789), (14846494, 14848004), (14847057, 14848673), (14848254, 14848673), (14848977, 14849038), (14849141, 14851281)] 2021-10-25 09:34:20.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.970 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082988: ['FBtr0113581'] 2021-10-25 09:34:20.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082988 has a single transcript. 2021-10-25 09:34:20.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285892: ['FBtr0088381', 'FBtr0300919', 'FBtr0300920', 'FBtr0300921'] 2021-10-25 09:34:20.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5296242, 5296318), (5296394, 5301320), (5301404, 5301464), (5302059, 5302120), (5302271, 5305878), (5302271, 5302570), (5305995, 5306076)] 2021-10-25 09:34:20.982 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5296065, 5296394, 'FBtr0340474_exon_1') contains intron (5296242, 5296318) 2021-10-25 09:34:20.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340474_exon_1'] 2021-10-25 09:34:20.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082989: ['FBtr0113582'] 2021-10-25 09:34:20.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082989 has a single transcript. 2021-10-25 09:34:20.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:20.987 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:20.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:20.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036807: ['FBtr0114373'] 2021-10-25 09:34:20.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036807 has a single transcript. 2021-10-25 09:34:20.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082990: ['FBtr0113537'] 2021-10-25 09:34:20.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082990 has a single transcript. 2021-10-25 09:34:21.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036808: ['FBtr0075090', 'FBtr0334056', 'FBtr0334057'] 2021-10-25 09:34:21.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082993: ['FBtr0113499'] 2021-10-25 09:34:21.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082993 has a single transcript. 2021-10-25 09:34:21.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082994: ['FBtr0113607'] 2021-10-25 09:34:21.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082994 has a single transcript. 2021-10-25 09:34:21.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082995: ['FBtr0113608'] 2021-10-25 09:34:21.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082995 has a single transcript. 2021-10-25 09:34:21.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082997: ['FBtr0113561'] 2021-10-25 09:34:21.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082997 has a single transcript. 2021-10-25 09:34:21.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040268: ['FBtr0081246'] 2021-10-25 09:34:21.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040268 has a single transcript. 2021-10-25 09:34:21.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082998: ['FBtr0113563'] 2021-10-25 09:34:21.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082998 has a single transcript. 2021-10-25 09:34:21.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040271: ['FBtr0083273', 'FBtr0334699', 'FBtr0334700'] 2021-10-25 09:34:21.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0082999: ['FBtr0113564'] 2021-10-25 09:34:21.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0082999 has a single transcript. 2021-10-25 09:34:21.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083000: ['FBtr0113565'] 2021-10-25 09:34:21.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083000 has a single transcript. 2021-10-25 09:34:21.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028887: ['FBtr0080675'] 2021-10-25 09:34:21.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028887 has a single transcript. 2021-10-25 09:34:21.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18697492, 18697566), (18697699, 18697763), (18697699, 18697767), (18698007, 18698069)] 2021-10-25 09:34:21.074 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9892047, 9892101), (9892533, 9892587), (9892902, 9892955), (9893789, 9893841), (9893880, 9893947), (9894691, 9894746), (9894691, 9894749), (9895196, 9895254), (9895196, 9895257), (9895485, 9895545), (9896104, 9896167), (9896693, 9896755), (9897690, 9898374)] 2021-10-25 09:34:21.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083001: ['FBtr0113566'] 2021-10-25 09:34:21.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083001 has a single transcript. 2021-10-25 09:34:21.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028888: ['FBtr0343105', 'FBtr0305559'] 2021-10-25 09:34:21.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083003: ['FBtr0113529'] 2021-10-25 09:34:21.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083003 has a single transcript. 2021-10-25 09:34:21.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083004: ['FBtr0113528'] 2021-10-25 09:34:21.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083004 has a single transcript. 2021-10-25 09:34:21.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261804: ['FBtr0343817', 'FBtr0303280'] 2021-10-25 09:34:21.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083005: ['FBtr0113527'] 2021-10-25 09:34:21.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083005 has a single transcript. 2021-10-25 09:34:21.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083006: ['FBtr0113500'] 2021-10-25 09:34:21.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083006 has a single transcript. 2021-10-25 09:34:21.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16311292, 16311360), (16311463, 16311526), (16311724, 16311800), (16312111, 16312172), (16313035, 16313105), (16313769, 16313823), (16314150, 16314364), (16315246, 16330919), (16315246, 16321962), (16322169, 16330919), (16330956, 16339310), (16330956, 16337844)] 2021-10-25 09:34:21.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15163764, 15164206), (15167483, 15167581), (15167692, 15171394), (15171539, 15178043), (15178321, 15200073)] 2021-10-25 09:34:21.122 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083007: ['FBtr0113568'] 2021-10-25 09:34:21.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083007 has a single transcript. 2021-10-25 09:34:21.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083008: ['FBtr0113570'] 2021-10-25 09:34:21.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083008 has a single transcript. 2021-10-25 09:34:21.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18161657, 18163891), (18163967, 18164932), (18165194, 18187211), (18187432, 18192931), (18193064, 18200622), (18200719, 18200810), (18200937, 18201287), (18201386, 18203665), (18204944, 18209768), (18210145, 18210556), (18210148, 18210556), (18211298, 18215463), (18211298, 18215764), (18215703, 18215764), (18215846, 18246024), (18246107, 18270987), (18271927, 18275462)] 2021-10-25 09:34:21.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083009: ['FBtr0113572'] 2021-10-25 09:34:21.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083009 has a single transcript. 2021-10-25 09:34:21.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083010: ['FBtr0113573'] 2021-10-25 09:34:21.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083010 has a single transcript. 2021-10-25 09:34:21.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083011: ['FBtr0113574'] 2021-10-25 09:34:21.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083011 has a single transcript. 2021-10-25 09:34:21.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083012: ['FBtr0113575'] 2021-10-25 09:34:21.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083012 has a single transcript. 2021-10-25 09:34:21.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036809: ['FBtr0075089'] 2021-10-25 09:34:21.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036809 has a single transcript. 2021-10-25 09:34:21.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028889: ['FBtr0080717'] 2021-10-25 09:34:21.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083013: ['FBtr0113560'] 2021-10-25 09:34:21.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028889 has a single transcript. 2021-10-25 09:34:21.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083013 has a single transcript. 2021-10-25 09:34:21.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036810: ['FBtr0075053'] 2021-10-25 09:34:21.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036810 has a single transcript. 2021-10-25 09:34:21.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083014: ['FBtr0113599'] 2021-10-25 09:34:21.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083014 has a single transcript. 2021-10-25 09:34:21.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028892: ['FBtr0080735', 'FBtr0346583'] 2021-10-25 09:34:21.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036811: ['FBtr0075054'] 2021-10-25 09:34:21.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036811 has a single transcript. 2021-10-25 09:34:21.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083015: ['FBtr0113610'] 2021-10-25 09:34:21.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083015 has a single transcript. 2021-10-25 09:34:21.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036812: ['FBtr0075088'] 2021-10-25 09:34:21.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036812 has a single transcript. 2021-10-25 09:34:21.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261805: ['FBtr0303281'] 2021-10-25 09:34:21.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261805 has a single transcript. 2021-10-25 09:34:21.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083016: ['FBtr0113524'] 2021-10-25 09:34:21.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083016 has a single transcript. 2021-10-25 09:34:21.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036813: ['FBtr0075055'] 2021-10-25 09:34:21.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036813 has a single transcript. 2021-10-25 09:34:21.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261806: ['FBtr0303282'] 2021-10-25 09:34:21.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261806 has a single transcript. 2021-10-25 09:34:21.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083017: ['FBtr0113522'] 2021-10-25 09:34:21.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083017 has a single transcript. 2021-10-25 09:34:21.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036814: ['FBtr0075084', 'FBtr0332801'] 2021-10-25 09:34:21.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261807: ['FBtr0303283'] 2021-10-25 09:34:21.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261807 has a single transcript. 2021-10-25 09:34:21.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040273: ['FBtr0086531'] 2021-10-25 09:34:21.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040273 has a single transcript. 2021-10-25 09:34:21.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083018: ['FBtr0113520'] 2021-10-25 09:34:21.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083018 has a single transcript. 2021-10-25 09:34:21.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:21.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285896: ['FBtr0075778', 'FBtr0100676'] 2021-10-25 09:34:21.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040279: ['FBtr0078606'] 2021-10-25 09:34:21.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040279 has a single transcript. 2021-10-25 09:34:21.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083020: ['FBtr0113554'] 2021-10-25 09:34:21.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083020 has a single transcript. 2021-10-25 09:34:21.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261808: ['FBtr0113219', 'FBtr0113218', 'FBtr0113220', 'FBtr0335218', 'FBtr0335219', 'FBtr0335220'] 2021-10-25 09:34:21.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040281: ['FBtr0072626', 'FBtr0072627'] 2021-10-25 09:34:21.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083021: ['FBtr0113552'] 2021-10-25 09:34:21.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083021 has a single transcript. 2021-10-25 09:34:21.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083022: ['FBtr0113550'] 2021-10-25 09:34:21.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083022 has a single transcript. 2021-10-25 09:34:21.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18802997, 18803062), (18803730, 18803828), (18803957, 18804023), (18809421, 18819310), (18819899, 18820399), (18819910, 18820399)] 2021-10-25 09:34:21.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083023: ['FBtr0113547'] 2021-10-25 09:34:21.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083023 has a single transcript. 2021-10-25 09:34:21.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083024: ['FBtr0113545'] 2021-10-25 09:34:21.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083024 has a single transcript. 2021-10-25 09:34:21.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14075813, 14075875), (14076048, 14079454), (14077127, 14079454), (14082188, 14082273)] 2021-10-25 09:34:21.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083025: ['FBtr0113543'] 2021-10-25 09:34:21.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083025 has a single transcript. 2021-10-25 09:34:21.294 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1196655, 1196936), (1197313, 1197529), (1197313, 1197508), (1198230, 1198298), (1198486, 1198554)] 2021-10-25 09:34:21.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.295 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028893: ['FBtr0080821'] 2021-10-25 09:34:21.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028893 has a single transcript. 2021-10-25 09:34:21.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083026: ['FBtr0113540'] 2021-10-25 09:34:21.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083026 has a single transcript. 2021-10-25 09:34:21.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028894: ['FBtr0080851'] 2021-10-25 09:34:21.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083027: ['FBtr0113559'] 2021-10-25 09:34:21.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028894 has a single transcript. 2021-10-25 09:34:21.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083027 has a single transcript. 2021-10-25 09:34:21.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083028: ['FBtr0113538'] 2021-10-25 09:34:21.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083028 has a single transcript. 2021-10-25 09:34:21.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028895: ['FBtr0080829', 'FBtr0337079'] 2021-10-25 09:34:21.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083029: ['FBtr0113555'] 2021-10-25 09:34:21.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083029 has a single transcript. 2021-10-25 09:34:21.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083030: ['FBtr0113553'] 2021-10-25 09:34:21.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083030 has a single transcript. 2021-10-25 09:34:21.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036815: ['FBtr0075056', 'FBtr0075057'] 2021-10-25 09:34:21.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083031: ['FBtr0113551'] 2021-10-25 09:34:21.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083031 has a single transcript. 2021-10-25 09:34:21.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285910: ['FBtr0070611'] 2021-10-25 09:34:21.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285910 has a single transcript. 2021-10-25 09:34:21.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083032: ['FBtr0113549'] 2021-10-25 09:34:21.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083032 has a single transcript. 2021-10-25 09:34:21.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040283: ['FBtr0084541'] 2021-10-25 09:34:21.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040283 has a single transcript. 2021-10-25 09:34:21.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285911: ['FBtr0081979'] 2021-10-25 09:34:21.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285911 has a single transcript. 2021-10-25 09:34:21.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083033: ['FBtr0113548'] 2021-10-25 09:34:21.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083033 has a single transcript. 2021-10-25 09:34:21.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285912: ['FBtr0084751'] 2021-10-25 09:34:21.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040285: ['FBtr0074079', 'FBtr0332591', 'FBtr0332592'] 2021-10-25 09:34:21.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285912 has a single transcript. 2021-10-25 09:34:21.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083034: ['FBtr0113546'] 2021-10-25 09:34:21.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083034 has a single transcript. 2021-10-25 09:34:21.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16300015, 16300492), (16300436, 16300492)] 2021-10-25 09:34:21.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083035: ['FBtr0113544'] 2021-10-25 09:34:21.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083035 has a single transcript. 2021-10-25 09:34:21.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285913: ['FBtr0082921', 'FBtr0082922', 'FBtr0082923', 'FBtr0309997', 'FBtr0309998', 'FBtr0309999', 'FBtr0344157'] 2021-10-25 09:34:21.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18821249, 18821306)] 2021-10-25 09:34:21.380 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821170, 18822353, 'FBtr0075057_exon_1') contains intron (18821249, 18821306) 2021-10-25 09:34:21.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075057_exon_1'] 2021-10-25 09:34:21.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083036: ['FBtr0113542'] 2021-10-25 09:34:21.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083036 has a single transcript. 2021-10-25 09:34:21.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11197848, 11206905), (11200568, 11204564), (11200568, 11206905), (11203785, 11206905), (11204831, 11206520), (11204831, 11206905), (11205674, 11206905), (11206625, 11206905), (11207138, 11207192), (11207255, 11207359), (11207481, 11207548), (11208181, 11208246)] 2021-10-25 09:34:21.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083037: ['FBtr0113541'] 2021-10-25 09:34:21.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083037 has a single transcript. 2021-10-25 09:34:21.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083038: ['FBtr0113539'] 2021-10-25 09:34:21.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083038 has a single transcript. 2021-10-25 09:34:21.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083039: ['FBtr0113583'] 2021-10-25 09:34:21.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083039 has a single transcript. 2021-10-25 09:34:21.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083040: ['FBtr0113567'] 2021-10-25 09:34:21.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083040 has a single transcript. 2021-10-25 09:34:21.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15446834, 15446903), (15447830, 15447894), (15448024, 15448378), (15448580, 15449280), (15448580, 15448858), (15449508, 15449704)] 2021-10-25 09:34:21.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028896: ['FBtr0080827'] 2021-10-25 09:34:21.423 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15446178, 15447830, 'FBtr0074079_exon_5') contains intron (15446834, 15446903) 2021-10-25 09:34:21.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028896 has a single transcript. 2021-10-25 09:34:21.424 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15446178, 15447830, 'FBtr0332592_exon_5') contains intron (15446834, 15446903) 2021-10-25 09:34:21.424 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074079_exon_5', 'FBtr0332592_exon_5'] 2021-10-25 09:34:21.424 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083041: ['FBtr0113569'] 2021-10-25 09:34:21.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083041 has a single transcript. 2021-10-25 09:34:21.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028897: ['FBtr0080825'] 2021-10-25 09:34:21.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028897 has a single transcript. 2021-10-25 09:34:21.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083042: ['FBtr0113571'] 2021-10-25 09:34:21.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083042 has a single transcript. 2021-10-25 09:34:21.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028899: ['FBtr0307508'] 2021-10-25 09:34:21.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028899 has a single transcript. 2021-10-25 09:34:21.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036816: ['FBtr0075081', 'FBtr0075082', 'FBtr0075083', 'FBtr0301857'] 2021-10-25 09:34:21.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083044: ['FBtr0113606'] 2021-10-25 09:34:21.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083044 has a single transcript. 2021-10-25 09:34:21.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028900: ['FBtr0080814'] 2021-10-25 09:34:21.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028900 has a single transcript. 2021-10-25 09:34:21.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083045: ['FBtr0113526'] 2021-10-25 09:34:21.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083045 has a single transcript. 2021-10-25 09:34:21.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028901: ['FBtr0080786'] 2021-10-25 09:34:21.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028901 has a single transcript. 2021-10-25 09:34:21.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083046: ['FBtr0113525'] 2021-10-25 09:34:21.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083046 has a single transcript. 2021-10-25 09:34:21.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028902: ['FBtr0080788', 'FBtr0331277'] 2021-10-25 09:34:21.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083047: ['FBtr0113594'] 2021-10-25 09:34:21.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083047 has a single transcript. 2021-10-25 09:34:21.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083048: ['FBtr0113595'] 2021-10-25 09:34:21.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083048 has a single transcript. 2021-10-25 09:34:21.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083049: ['FBtr0113596'] 2021-10-25 09:34:21.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083049 has a single transcript. 2021-10-25 09:34:21.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083050: ['FBtr0113597'] 2021-10-25 09:34:21.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083050 has a single transcript. 2021-10-25 09:34:21.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083053: ['FBtr0113514'] 2021-10-25 09:34:21.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083053 has a single transcript. 2021-10-25 09:34:21.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15854722, 15854813), (15855088, 15855153)] 2021-10-25 09:34:21.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083054: ['FBtr0113513'] 2021-10-25 09:34:21.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083054 has a single transcript. 2021-10-25 09:34:21.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083055: ['FBtr0113584'] 2021-10-25 09:34:21.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083055 has a single transcript. 2021-10-25 09:34:21.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083057: ['FBtr0113600'] 2021-10-25 09:34:21.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083057 has a single transcript. 2021-10-25 09:34:21.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14289449, 14290241), (14289449, 14290729), (14290460, 14290729), (14290820, 14298789), (14298547, 14298789), (14298669, 14298789), (14298692, 14298789), (14298987, 14300419), (14301018, 14301227)] 2021-10-25 09:34:21.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18829513, 18829578), (18829957, 18830275), (18830734, 18830839), (18831028, 18831092), (18831241, 18831310), (18831427, 18831494), (18831621, 18831946), (18831984, 18846035), (18831984, 18840275), (18831984, 18841151), (18831984, 18840372)] 2021-10-25 09:34:21.548 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040290: ['FBtr0076729'] 2021-10-25 09:34:21.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040290 has a single transcript. 2021-10-25 09:34:21.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083058: ['FBtr0113602'] 2021-10-25 09:34:21.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083058 has a single transcript. 2021-10-25 09:34:21.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040291: ['FBtr0072547'] 2021-10-25 09:34:21.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040291 has a single transcript. 2021-10-25 09:34:21.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083068: ['FBtr0347287'] 2021-10-25 09:34:21.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083068 has a single transcript. 2021-10-25 09:34:21.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040294: ['FBtr0086828'] 2021-10-25 09:34:21.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040294 has a single transcript. 2021-10-25 09:34:21.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083120: ['FBtr0300233'] 2021-10-25 09:34:21.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083120 has a single transcript. 2021-10-25 09:34:21.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083121: ['FBtr0300232'] 2021-10-25 09:34:21.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040296: ['FBtr0309062', 'FBtr0299779'] 2021-10-25 09:34:21.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083121 has a single transcript. 2021-10-25 09:34:21.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028903: ['FBtr0080787', 'FBtr0331276'] 2021-10-25 09:34:21.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083123: ['FBtr0300231', 'FBtr0300251'] 2021-10-25 09:34:21.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:21.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.631 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15852700, 15852752)] 2021-10-25 09:34:21.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.632 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14621750, 14621959), (14622020, 14622239), (14622294, 14622477), (14622294, 14622712), (14622531, 14622712), (14622766, 14622944), (14623004, 14623188), (14623245, 14623416), (14623469, 14623686), (14623731, 14623919), (14623978, 14624156), (14624220, 14624402)] 2021-10-25 09:34:21.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261811: ['FBtr0074805', 'FBtr0074804', 'FBtr0303995', 'FBtr0303996'] 2021-10-25 09:34:21.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028909: ['FBtr0080609'] 2021-10-25 09:34:21.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028909 has a single transcript. 2021-10-25 09:34:21.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028910: ['FBtr0080647'] 2021-10-25 09:34:21.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028910 has a single transcript. 2021-10-25 09:34:21.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028911: ['FBtr0080660'] 2021-10-25 09:34:21.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028911 has a single transcript. 2021-10-25 09:34:21.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040297: ['FBtr0081466', 'FBtr0081467', 'FBtr0306015', 'FBtr0306016', 'FBtr0299908', 'FBtr0299909', 'FBtr0299910', 'FBtr0299911', 'FBtr0299912', 'FBtr0334171', 'FBtr0334172', 'FBtr0334173'] 2021-10-25 09:34:21.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083124: ['FBtr0300230'] 2021-10-25 09:34:21.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083124 has a single transcript. 2021-10-25 09:34:21.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036817: ['FBtr0308811'] 2021-10-25 09:34:21.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036817 has a single transcript. 2021-10-25 09:34:21.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028912: ['FBtr0080646'] 2021-10-25 09:34:21.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028912 has a single transcript. 2021-10-25 09:34:21.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083141: ['FBtr0079470', 'FBtr0335485'] 2021-10-25 09:34:21.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036818: ['FBtr0308812'] 2021-10-25 09:34:21.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036818 has a single transcript. 2021-10-25 09:34:21.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028913: ['FBtr0080661', 'FBtr0343700'] 2021-10-25 09:34:21.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003372: ['FBtr0077393'] 2021-10-25 09:34:21.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003372 has a single transcript. 2021-10-25 09:34:21.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036819: ['FBtr0075062', 'FBtr0333708'] 2021-10-25 09:34:21.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003373: ['FBtr0076096'] 2021-10-25 09:34:21.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003373 has a single transcript. 2021-10-25 09:34:21.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003374: ['FBtr0346736'] 2021-10-25 09:34:21.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003374 has a single transcript. 2021-10-25 09:34:21.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003375: ['FBtr0083461'] 2021-10-25 09:34:21.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003375 has a single transcript. 2021-10-25 09:34:21.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:21.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003377: ['FBtr0076095'] 2021-10-25 09:34:21.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003377 has a single transcript. 2021-10-25 09:34:21.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003378: ['FBtr0076160'] 2021-10-25 09:34:21.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003378 has a single transcript. 2021-10-25 09:34:21.767 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7581947, 7582004), (7582846, 7582898), (7583037, 7583090)] 2021-10-25 09:34:21.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.768 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19833235, 19833320), (19835566, 19835643), (19836754, 19845538), (19836754, 19849941), (19836754, 19848066), (19836754, 19850862)] 2021-10-25 09:34:21.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18868645, 18868703)] 2021-10-25 09:34:21.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003380: ['FBtr0089660', 'FBtr0089661', 'FBtr0089657', 'FBtr0089658', 'FBtr0089663', 'FBtr0089659', 'FBtr0301955', 'FBtr0302902', 'FBtr0302903', 'FBtr0308199', 'FBtr0308200', 'FBtr0332299', 'FBtr0346703', 'FBtr0346705', 'FBtr0346706'] 2021-10-25 09:34:21.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028916: ['FBtr0080624', 'FBtr0343673', 'FBtr0343674', 'FBtr0343675'] 2021-10-25 09:34:21.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083167: ['FBtr0071449', 'FBtr0332952'] 2021-10-25 09:34:21.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036820: ['FBtr0075063', 'FBtr0308813'] 2021-10-25 09:34:21.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18869330, 18869426), (18869646, 18869706), (18869811, 18869876)] 2021-10-25 09:34:21.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285917: ['FBtr0086766', 'FBtr0301547', 'FBtr0301548', 'FBtr0301549', 'FBtr0301550', 'FBtr0301551', 'FBtr0329997'] 2021-10-25 09:34:21.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10460848, 10460919), (10460996, 10461081)] 2021-10-25 09:34:21.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14334570, 14341306), (14341576, 14342852), (14341576, 14342777), (14341576, 14342783), (14342635, 14342777), (14343370, 14343436), (14343692, 14343749), (14344123, 14344182), (14344416, 14344480)] 2021-10-25 09:34:21.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:21.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:21.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261813: ['FBtr0344645'] 2021-10-25 09:34:21.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261813 has a single transcript. 2021-10-25 09:34:21.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261814: ['FBtr0303300'] 2021-10-25 09:34:21.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036821: ['FBtr0075077', 'FBtr0075078', 'FBtr0302322', 'FBtr0333712'] 2021-10-25 09:34:21.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261814 has a single transcript. 2021-10-25 09:34:21.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083228: ['FBtr0074546', 'FBtr0301627', 'FBtr0301628', 'FBtr0333321'] 2021-10-25 09:34:21.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261816: ['FBtr0303303'] 2021-10-25 09:34:21.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261816 has a single transcript. 2021-10-25 09:34:21.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261817: ['FBtr0303304'] 2021-10-25 09:34:21.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261817 has a single transcript. 2021-10-25 09:34:21.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261822: ['FBtr0332498', 'FBtr0079570', 'FBtr0079568', 'FBtr0079569', 'FBtr0079574', 'FBtr0079573', 'FBtr0079567', 'FBtr0079571', 'FBtr0079572', 'FBtr0079566'] 2021-10-25 09:34:22.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21105008, 21114593), (21108227, 21114593), (21114534, 21114593), (21115092, 21116259), (21116482, 21117870), (21118134, 21119752), (21119952, 21120059), (21120180, 21120275), (21120414, 21120478), (21120696, 21120754), (21121047, 21121109), (21121235, 21121332), (21121235, 21121581), (21121739, 21122250), (21121769, 21122250), (21122389, 21124134), (21122389, 21122912), (21122927, 21124134), (21124191, 21124286), (21124373, 21124439), (21124373, 21124442), (21124521, 21125316), (21124521, 21125346), (21124614, 21125346), (21124614, 21125316), (21125439, 21126158), (21125439, 21127849), (21126374, 21127849), (21128062, 21128739), (21128062, 21128778), (21129082, 21132033), (21129082, 21130004), (21129082, 21131230), (21130286, 21131230), (21131463, 21132033)] 2021-10-25 09:34:22.004 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21130004, 21131984, 'FBtr0306015_exon_20') contains intron (21130286, 21131230) 2021-10-25 09:34:22.005 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21121109, 21121543, 'FBtr0299909_exon_10') contains intron (21121235, 21121332) 2021-10-25 09:34:22.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306015_exon_20', 'FBtr0299909_exon_10'] 2021-10-25 09:34:22.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18879224, 18879286), (18879460, 18879510), (18879739, 18879801), (18880979, 18881077), (18881251, 18882142), (18881251, 18887060), (18881251, 18882318), (18882178, 18882318), (18882530, 18884735), (18882530, 18884801), (18887215, 18887552), (18887746, 18890189), (18890281, 18890345)] 2021-10-25 09:34:22.040 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18890189, 18890483, 'FBtr0075077_exon_1') contains intron (18890281, 18890345) 2021-10-25 09:34:22.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075077_exon_1'] 2021-10-25 09:34:22.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18178091, 18192330), (18186249, 18186386), (18186439, 18192330), (18186501, 18192330), (18192563, 18199123), (18199148, 18199773), (18199822, 18200654), (18200744, 18200829), (18200908, 18201142), (18201231, 18201291)] 2021-10-25 09:34:22.047 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18186154, 18186439, 'FBtr0074546_exon_1') contains intron (18186249, 18186386) 2021-10-25 09:34:22.047 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18186154, 18186501, 'FBtr0301628_exon_1') contains intron (18186249, 18186386) 2021-10-25 09:34:22.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074546_exon_1', 'FBtr0301628_exon_1'] 2021-10-25 09:34:22.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028919: ['FBtr0080540', 'FBtr0331626'] 2021-10-25 09:34:22.062 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18280176, 18280245), (18281513, 18281628), (18281897, 18281964), (18282178, 18282244), (18283244, 18283330), (18284510, 18284603), (18284721, 18285236), (18287739, 18288126), (18288388, 18289534), (18288388, 18288559), (18288727, 18289534), (18289850, 18355499), (18289850, 18306030), (18306135, 18355499), (18356055, 18357137)] 2021-10-25 09:34:22.062 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18355499, 18357296, 'FBtr0301547_exon_1') contains intron (18356055, 18357137) 2021-10-25 09:34:22.063 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18355499, 18357296, 'FBtr0301548_exon_1') contains intron (18356055, 18357137) 2021-10-25 09:34:22.063 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18355499, 18357296, 'FBtr0301549_exon_1') contains intron (18356055, 18357137) 2021-10-25 09:34:22.063 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18355499, 18357296, 'FBtr0329997_exon_1') contains intron (18356055, 18357137) 2021-10-25 09:34:22.064 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301547_exon_1', 'FBtr0301548_exon_1', 'FBtr0301549_exon_1', 'FBtr0329997_exon_1'] 2021-10-25 09:34:22.064 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13811765, 13811825), (13811986, 13812051), (13812357, 13812478)] 2021-10-25 09:34:22.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.153 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17929703, 17930116), (17930437, 17930585), (17930776, 17945218), (17939954, 17940719), (17941157, 17942781), (17941160, 17942781), (17942972, 17946598), (17942972, 17945218), (17945348, 17949920), (17946728, 17949920), (17950092, 17950610), (17950764, 17951191), (17951313, 17951414), (17951610, 17952676), (17952773, 17952987), (17953156, 17953222), (17953346, 17961632), (17953346, 18039084), (17953346, 18014263), (17953346, 17976350), (17953346, 17993413), (17962251, 17966347), (17976791, 17990390), (17976791, 17990333), (17994562, 17995573), (18014476, 18015127), (18039957, 18040201), (18040383, 18059734), (18060548, 18062826), (18062943, 18063092)] 2021-10-25 09:34:22.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028920: ['FBtr0080563', 'FBtr0343671'] 2021-10-25 09:34:22.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18039084, 18040383, 'FBtr0089661_exon_3') contains intron (18039957, 18040201) 2021-10-25 09:34:22.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18062826, 18063247, 'FBtr0089661_exon_1') contains intron (18062943, 18063092) 2021-10-25 09:34:22.155 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17949979, 17950764, 'FBtr0089659_exon_8') contains intron (17950092, 17950610) 2021-10-25 09:34:22.155 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18039084, 18040383, 'FBtr0302902_exon_3') contains intron (18039957, 18040201) 2021-10-25 09:34:22.156 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18062826, 18063247, 'FBtr0302902_exon_1') contains intron (18062943, 18063092) 2021-10-25 09:34:22.157 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18039084, 18040383, 'FBtr0332299_exon_3') contains intron (18039957, 18040201) 2021-10-25 09:34:22.157 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18062826, 18063247, 'FBtr0332299_exon_1') contains intron (18062943, 18063092) 2021-10-25 09:34:22.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089661_exon_3', 'FBtr0089661_exon_1', 'FBtr0089659_exon_8', 'FBtr0302902_exon_3', 'FBtr0302902_exon_1', 'FBtr0332299_exon_3', 'FBtr0332299_exon_1'] 2021-10-25 09:34:22.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036822: ['FBtr0075065'] 2021-10-25 09:34:22.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036822 has a single transcript. 2021-10-25 09:34:22.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083936: ['FBtr0110768'] 2021-10-25 09:34:22.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083936 has a single transcript. 2021-10-25 09:34:22.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036824: ['FBtr0075076'] 2021-10-25 09:34:22.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036824 has a single transcript. 2021-10-25 09:34:22.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036825: ['FBtr0075066', 'FBtr0347494', 'FBtr0333709'] 2021-10-25 09:34:22.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13845128, 13845192)] 2021-10-25 09:34:22.202 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083938: ['FBtr0110769', 'FBtr0346457'] 2021-10-25 09:34:22.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8083521, 8089184), (8083521, 8089393), (8083636, 8089184), (8083636, 8089393), (8088453, 8089184), (8088453, 8088609), (8088453, 8089393), (8088516, 8089393), (8088705, 8089184), (8089736, 8102299), (8089736, 8105691), (8102518, 8102597), (8103503, 8105691), (8105809, 8106839), (8107000, 8107065), (8107173, 8107237), (8107438, 8107747), (8107880, 8110480), (8107880, 8109296)] 2021-10-25 09:34:22.226 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079570_exon_7') contains intron (8107880, 8109296) 2021-10-25 09:34:22.226 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8116531, 'FBtr0079568_exon_7') contains intron (8107880, 8110480) 2021-10-25 09:34:22.227 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079569_exon_7') contains intron (8107880, 8109296) 2021-10-25 09:34:22.227 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079573_exon_6') contains intron (8107880, 8109296) 2021-10-25 09:34:22.228 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079567_exon_7') contains intron (8107880, 8109296) 2021-10-25 09:34:22.228 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8116531, 'FBtr0079571_exon_8') contains intron (8107880, 8110480) 2021-10-25 09:34:22.229 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079572_exon_7') contains intron (8107880, 8109296) 2021-10-25 09:34:22.229 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8107747, 8109458, 'FBtr0079566_exon_7') contains intron (8107880, 8109296) 2021-10-25 09:34:22.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079570_exon_7', 'FBtr0079568_exon_7', 'FBtr0079569_exon_7', 'FBtr0079573_exon_6', 'FBtr0079567_exon_7', 'FBtr0079571_exon_8', 'FBtr0079572_exon_7', 'FBtr0079566_exon_7'] 2021-10-25 09:34:22.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4641390, 4641448)] 2021-10-25 09:34:22.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028926: ['FBtr0080695'] 2021-10-25 09:34:22.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028926 has a single transcript. 2021-10-25 09:34:22.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028931: ['FBtr0110942', 'FBtr0080536'] 2021-10-25 09:34:22.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18898914, 18899305), (18899139, 18899305)] 2021-10-25 09:34:22.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.309 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13791164, 13791217), (13791595, 13791664)] 2021-10-25 09:34:22.309 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13790958, 13791595, 'FBtr0080536_exon_1') contains intron (13791164, 13791217) 2021-10-25 09:34:22.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080536_exon_1'] 2021-10-25 09:34:22.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083940: ['FBtr0110782', 'FBtr0110783', 'FBtr0343017'] 2021-10-25 09:34:22.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028932: ['FBtr0080575', 'FBtr0343661', 'FBtr0329825'] 2021-10-25 09:34:22.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036826: ['FBtr0075075'] 2021-10-25 09:34:22.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036826 has a single transcript. 2021-10-25 09:34:22.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285925: ['FBtr0083332', 'FBtr0300036', 'FBtr0300037', 'FBtr0083334', 'FBtr0083333', 'FBtr0112803', 'FBtr0333726'] 2021-10-25 09:34:22.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036827: ['FBtr0075067'] 2021-10-25 09:34:22.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036827 has a single transcript. 2021-10-25 09:34:22.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10086791, 10087342), (10087408, 10122055), (10087408, 10106477), (10106515, 10122055), (10123204, 10133971), (10134116, 10134405), (10134543, 10146422), (10134543, 10137898), (10146682, 10146867), (10146960, 10148343)] 2021-10-25 09:34:22.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036828: ['FBtr0075068', 'FBtr0346816'] 2021-10-25 09:34:22.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18905591, 18905658), (18907177, 18907258), (18908212, 18908285)] 2021-10-25 09:34:22.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.443 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13782945, 13782996), (13783412, 13784285)] 2021-10-25 09:34:22.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083941: ['FBtr0110784'] 2021-10-25 09:34:22.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083941 has a single transcript. 2021-10-25 09:34:22.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036829: ['FBtr0309798'] 2021-10-25 09:34:22.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036829 has a single transcript. 2021-10-25 09:34:22.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083942: ['FBtr0110785', 'FBtr0343134'] 2021-10-25 09:34:22.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036830: ['FBtr0309797', 'FBtr0299821'] 2021-10-25 09:34:22.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028935: ['FBtr0306681'] 2021-10-25 09:34:22.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028935 has a single transcript. 2021-10-25 09:34:22.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17131624, 17133482), (17133816, 17158541), (17158750, 17161860), (17161996, 17169813), (17170076, 17170136), (17170260, 17170328)] 2021-10-25 09:34:22.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18908790, 18909023), (18909907, 18909980), (18910686, 18913026), (18913448, 18913499), (18913742, 18913805), (18913901, 18913955)] 2021-10-25 09:34:22.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040298: ['FBtr0077118'] 2021-10-25 09:34:22.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040298 has a single transcript. 2021-10-25 09:34:22.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028936: ['FBtr0080586', 'FBtr0302501', 'FBtr0343643'] 2021-10-25 09:34:22.568 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16625342, 16625968), (16626216, 16629559), (16626216, 16631608), (16629598, 16631608), (16631741, 16631822), (16631989, 16632063), (16632294, 16632361), (16632530, 16632607), (16632768, 16635545), (16632768, 16634373), (16634382, 16635085), (16634382, 16635545), (16635094, 16635545), (16635700, 16635766), (16635857, 16635921), (16636142, 16636201), (16636364, 16636428), (16636576, 16636985), (16636576, 16636774), (16636810, 16636985), (16637111, 16638622)] 2021-10-25 09:34:22.570 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16636985, 16639771, 'FBtr0333726_exon_14') contains intron (16637111, 16638622) 2021-10-25 09:34:22.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333726_exon_14'] 2021-10-25 09:34:22.571 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040299: ['FBtr0079473', 'FBtr0079474', 'FBtr0079475', 'FBtr0079476'] 2021-10-25 09:34:22.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083943: ['FBtr0110787'] 2021-10-25 09:34:22.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083943 has a single transcript. 2021-10-25 09:34:22.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036831: ['FBtr0075069'] 2021-10-25 09:34:22.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036831 has a single transcript. 2021-10-25 09:34:22.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083945: ['FBtr0300423'] 2021-10-25 09:34:22.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083945 has a single transcript. 2021-10-25 09:34:22.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13970216, 13970487), (13970866, 13971138), (13971681, 13971740)] 2021-10-25 09:34:22.635 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.635 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036832: ['FBtr0075071', 'FBtr0333711'] 2021-10-25 09:34:22.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083946: ['FBtr0110797'] 2021-10-25 09:34:22.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083946 has a single transcript. 2021-10-25 09:34:22.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083949: ['FBtr0110806', 'FBtr0110807'] 2021-10-25 09:34:22.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7666103, 7680607), (7678920, 7680607), (7680871, 7680935), (7682057, 7682112), (7682628, 7682729), (7683749, 7685762), (7685972, 7686026), (7686325, 7686387), (7687923, 7687973), (7688097, 7688164)] 2021-10-25 09:34:22.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18919622, 18919671), (18919948, 18920003), (18919948, 18920007)] 2021-10-25 09:34:22.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5865802, 5866122), (5866403, 5866863), (5867022, 5873416), (5873551, 5876076), (5876331, 5878699), (5878134, 5878699), (5878825, 5879669), (5878825, 5879573), (5879822, 5884664), (5884824, 5884893), (5885024, 5886574), (5886725, 5886865), (5887011, 5887078), (5887285, 5892220), (5892331, 5892701), (5892771, 5892850), (5892989, 5903715), (5903848, 5939363), (5939938, 5958824)] 2021-10-25 09:34:22.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261823: ['FBtr0087493', 'FBtr0100154', 'FBtr0332929', 'FBtr0332930'] 2021-10-25 09:34:22.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028938: ['FBtr0080560', 'FBtr0302990'] 2021-10-25 09:34:22.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036833: ['FBtr0075048', 'FBtr0333710'] 2021-10-25 09:34:22.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083950: ['FBtr0110808', 'FBtr0301070'] 2021-10-25 09:34:22.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13921768, 13921875), (13922460, 13922524), (13922998, 13923348)] 2021-10-25 09:34:22.782 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13920706, 13922460, 'FBtr0080560_exon_3') contains intron (13921768, 13921875) 2021-10-25 09:34:22.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080560_exon_3'] 2021-10-25 09:34:22.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.788 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14504369, 14505167), (14504570, 14505167), (14505482, 14505550), (14506481, 14506541), (14507145, 14507256), (14507349, 14507539), (14507349, 14507415), (14507349, 14507412), (14507481, 14507539), (14508312, 14508385), (14509783, 14509839), (14510160, 14510222), (14510463, 14511004), (14510494, 14511004)] 2021-10-25 09:34:22.789 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18921699, 18921956)] 2021-10-25 09:34:22.793 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003382: ['FBtr0088120', 'FBtr0273343', 'FBtr0332463'] 2021-10-25 09:34:22.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10973349, 10992904), (10993605, 11012013), (11012137, 11012220), (11012344, 11012440), (11012525, 11013317), (11013428, 11019667), (11019868, 11023467), (11023619, 11023672), (11023817, 11027197), (11027328, 11032511), (11032671, 11034716), (11034925, 11039910), (11040073, 11044002), (11044224, 11045244), (11045544, 11046377), (11046535, 11047312)] 2021-10-25 09:34:22.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040305: ['FBtr0076459', 'FBtr0076460', 'FBtr0113322', 'FBtr0113323', 'FBtr0113324', 'FBtr0344236', 'FBtr0344237'] 2021-10-25 09:34:22.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028939: ['FBtr0080589', 'FBtr0080588', 'FBtr0343689'] 2021-10-25 09:34:22.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036834: ['FBtr0075023'] 2021-10-25 09:34:22.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036834 has a single transcript. 2021-10-25 09:34:22.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036835: ['FBtr0075024'] 2021-10-25 09:34:22.864 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036835 has a single transcript. 2021-10-25 09:34:22.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11324410, 11324471), (11324573, 11325789), (11326256, 11329202), (11329502, 11330092), (11330191, 11330258), (11330191, 11330237), (11330453, 11331112), (11331223, 11331516), (11331843, 11331908), (11332384, 11332438), (11332384, 11332462), (11332681, 11332788)] 2021-10-25 09:34:22.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285926: ['FBtr0073415', 'FBtr0073417', 'FBtr0073414', 'FBtr0073416', 'FBtr0073418', 'FBtr0301409', 'FBtr0073413', 'FBtr0073420', 'FBtr0305149', 'FBtr0073419', 'FBtr0305150', 'FBtr0346315'] 2021-10-25 09:34:22.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036836: ['FBtr0075046'] 2021-10-25 09:34:22.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036836 has a single transcript. 2021-10-25 09:34:22.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083951: ['FBtr0110813'] 2021-10-25 09:34:22.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083951 has a single transcript. 2021-10-25 09:34:22.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083952: ['FBtr0110816'] 2021-10-25 09:34:22.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083952 has a single transcript. 2021-10-25 09:34:22.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036837: ['FBtr0075042', 'FBtr0075043', 'FBtr0075044', 'FBtr0075045', 'FBtr0332651'] 2021-10-25 09:34:22.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083953: ['FBtr0110817'] 2021-10-25 09:34:22.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083953 has a single transcript. 2021-10-25 09:34:22.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033160: ['FBtr0088966', 'FBtr0336909'] 2021-10-25 09:34:22.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083956: ['FBtr0110826', 'FBtr0110827', 'FBtr0299591', 'FBtr0343018'] 2021-10-25 09:34:22.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13980274, 13980615), (13980274, 13980337), (13980440, 13980501), (13980557, 13980615), (13981534, 13981677)] 2021-10-25 09:34:22.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.919 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261830: ['FBtr0303390'] 2021-10-25 09:34:22.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261830 has a single transcript. 2021-10-25 09:34:22.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7387580, 7387634), (7388428, 7388707), (7389181, 7389246), (7389510, 7390077), (7390200, 7390267), (7390621, 7390679)] 2021-10-25 09:34:22.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261831: ['FBtr0303391'] 2021-10-25 09:34:22.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261831 has a single transcript. 2021-10-25 09:34:22.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261832: ['FBtr0303392', 'FBtr0303393', 'FBtr0331568'] 2021-10-25 09:34:22.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003386: ['FBtr0089274', 'FBtr0089275', 'FBtr0289989', 'FBtr0332184', 'FBtr0332185'] 2021-10-25 09:34:22.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9430836, 9435856), (9430836, 9433898), (9430836, 9434395), (9431333, 9434395), (9431333, 9433898), (9434046, 9434395), (9434498, 9435856), (9435607, 9435856), (9436007, 9436115), (9437361, 9438978)] 2021-10-25 09:34:22.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:22.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21124119, 21132369), (21132752, 21132804), (21132947, 21133186), (21133270, 21133327), (21133468, 21133547), (21133468, 21133813), (21133595, 21133813), (21133953, 21134020), (21135027, 21135089), (21135210, 21135374), (21135565, 21135625), (21135963, 21136020), (21135963, 21136023), (21136676, 21136858), (21138117, 21138191), (21138897, 21139266)] 2021-10-25 09:34:22.999 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:22.999 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18992725, 18998000), (18992725, 18995430), (18992725, 18993725)] 2021-10-25 09:34:23.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033164: ['FBtr0113047'] 2021-10-25 09:34:23.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033164 has a single transcript. 2021-10-25 09:34:23.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028940: ['FBtr0080587'] 2021-10-25 09:34:23.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028940 has a single transcript. 2021-10-25 09:34:23.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033165: ['FBtr0113048'] 2021-10-25 09:34:23.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033165 has a single transcript. 2021-10-25 09:34:23.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028941: ['FBtr0080508', 'FBtr0332508'] 2021-10-25 09:34:23.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20464993, 20465049), (20465351, 20465411), (20465540, 20465880), (20465540, 20465620)] 2021-10-25 09:34:23.037 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20465049, 20465540, 'FBtr0331568_exon_2') contains intron (20465351, 20465411) 2021-10-25 09:34:23.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331568_exon_2'] 2021-10-25 09:34:23.038 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033166: ['FBtr0089006', 'FBtr0089007', 'FBtr0089008', 'FBtr0089009'] 2021-10-25 09:34:23.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:23.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3718485, 3720874), (3718485, 3721378), (3720904, 3720967), (3721091, 3721378), (3721589, 3721644), (3721762, 3721822), (3722017, 3722352), (3722571, 3722652), (3723256, 3723635), (3723764, 3725655), (3723764, 3726696), (3723764, 3724883), (3723764, 3726678), (3725196, 3726678), (3725901, 3726678)] 2021-10-25 09:34:23.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7398809, 7398870), (7399324, 7399378), (7399466, 7399615), (7399815, 7399873), (7400012, 7406037), (7406119, 7406646), (7406130, 7406205), (7407060, 7407739), (7407060, 7407137)] 2021-10-25 09:34:23.137 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7406205, 7407819, 'FBtr0089006_exon_1') contains intron (7407060, 7407739) 2021-10-25 09:34:23.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089006_exon_1'] 2021-10-25 09:34:23.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261833: ['FBtr0346734', 'FBtr0344656'] 2021-10-25 09:34:23.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028942: ['FBtr0080507'] 2021-10-25 09:34:23.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028942 has a single transcript. 2021-10-25 09:34:23.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083960: ['FBtr0110838'] 2021-10-25 09:34:23.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083960 has a single transcript. 2021-10-25 09:34:23.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028943: ['FBtr0080516'] 2021-10-25 09:34:23.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028943 has a single transcript. 2021-10-25 09:34:23.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10797437, 10797507), (10797663, 10797835), (10798544, 10798618), (10798565, 10798618), (10798993, 10805265), (10798993, 10813248), (10798993, 10799750), (10799924, 10805265), (10799924, 10813248), (10805469, 10806441), (10805469, 10806468), (10805469, 10806662), (10814093, 10814620), (10814093, 10815601), (10814093, 10824174), (10814093, 10821318), (10814093, 10822391), (10814771, 10815601), (10821488, 10821596)] 2021-10-25 09:34:23.166 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10821318, 10821817, 'FBtr0073415_exon_1') contains intron (10821488, 10821596) 2021-10-25 09:34:23.167 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10821318, 10821817, 'FBtr0305150_exon_1') contains intron (10821488, 10821596) 2021-10-25 09:34:23.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073415_exon_1', 'FBtr0305150_exon_1'] 2021-10-25 09:34:23.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083961: ['FBtr0110839'] 2021-10-25 09:34:23.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083961 has a single transcript. 2021-10-25 09:34:23.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028944: ['FBtr0080784'] 2021-10-25 09:34:23.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028944 has a single transcript. 2021-10-25 09:34:23.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028945: ['FBtr0080754'] 2021-10-25 09:34:23.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028945 has a single transcript. 2021-10-25 09:34:23.196 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26324791, 26324999)] 2021-10-25 09:34:23.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083962: ['FBtr0290010', 'FBtr0329974', 'FBtr0329975', 'FBtr0329976', 'FBtr0329977'] 2021-10-25 09:34:23.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028946: ['FBtr0080781'] 2021-10-25 09:34:23.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028946 has a single transcript. 2021-10-25 09:34:23.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036838: ['FBtr0075041'] 2021-10-25 09:34:23.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036838 has a single transcript. 2021-10-25 09:34:23.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036839: ['FBtr0075040'] 2021-10-25 09:34:23.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036839 has a single transcript. 2021-10-25 09:34:23.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028947: ['FBtr0080753'] 2021-10-25 09:34:23.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028947 has a single transcript. 2021-10-25 09:34:23.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028948: ['FBtr0080782'] 2021-10-25 09:34:23.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028948 has a single transcript. 2021-10-25 09:34:23.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036842: ['FBtr0075037', 'FBtr0332648'] 2021-10-25 09:34:23.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028949: ['FBtr0080783', 'FBtr0343718'] 2021-10-25 09:34:23.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261834: ['FBtr0303395', 'FBtr0303396'] 2021-10-25 09:34:23.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19061330, 19061386), (19061600, 19061740), (19061935, 19062002)] 2021-10-25 09:34:23.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15614518, 15614574)] 2021-10-25 09:34:23.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040308: ['FBtr0072982', 'FBtr0072983', 'FBtr0332112'] 2021-10-25 09:34:23.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15977093, 15977154), (15977316, 15977422)] 2021-10-25 09:34:23.288 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15977154, 15977660, 'FBtr0303396_exon_2') contains intron (15977316, 15977422) 2021-10-25 09:34:23.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303396_exon_2'] 2021-10-25 09:34:23.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033167: ['FBtr0332995', 'FBtr0113049'] 2021-10-25 09:34:23.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4982072, 4983713), (4983915, 4983982), (4984609, 4984712), (4985424, 4985861), (4985424, 4985732), (4985762, 4985861), (4985954, 4986016), (4987089, 4987158), (4987240, 4987906), (4987318, 4987906), (4988048, 4988114), (4988672, 4988733), (4988848, 4989389), (4988848, 4990307), (4989410, 4990307), (4990450, 4990505), (4990629, 4990691), (4990839, 4990907), (4991082, 4991144), (4991262, 4991560), (4991262, 4991384), (4991436, 4991560)] 2021-10-25 09:34:23.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003388: ['FBtr0075676', 'FBtr0304700', 'FBtr0333031'] 2021-10-25 09:34:23.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036843: ['FBtr0075025'] 2021-10-25 09:34:23.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036843 has a single transcript. 2021-10-25 09:34:23.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028950: ['FBtr0080785', 'FBtr0343719'] 2021-10-25 09:34:23.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036844: ['FBtr0075035', 'FBtr0075036', 'FBtr0330089', 'FBtr0333220'] 2021-10-25 09:34:23.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7409272, 7409335)] 2021-10-25 09:34:23.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3042450, 3043044), (3042772, 3043044), (3043205, 3043271), (3043389, 3043440), (3043846, 3043904)] 2021-10-25 09:34:23.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261835: ['FBtr0303397'] 2021-10-25 09:34:23.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261835 has a single transcript. 2021-10-25 09:34:23.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:23.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261836: ['FBtr0332403', 'FBtr0332404', 'FBtr0332405', 'FBtr0332406', 'FBtr0303383', 'FBtr0303384', 'FBtr0303385', 'FBtr0303386', 'FBtr0303387', 'FBtr0303388', 'FBtr0303389'] 2021-10-25 09:34:23.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14614930, 14619432), (14614930, 14616457), (14616712, 14619432), (14619727, 14619917), (14619860, 14619917), (14620512, 14620577), (14620755, 14620812), (14621052, 14621180), (14621396, 14621472)] 2021-10-25 09:34:23.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033168: ['FBtr0089004'] 2021-10-25 09:34:23.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033168 has a single transcript. 2021-10-25 09:34:23.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033169: ['FBtr0088971'] 2021-10-25 09:34:23.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033169 has a single transcript. 2021-10-25 09:34:23.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033170: ['FBtr0088973', 'FBtr0088972', 'FBtr0100138'] 2021-10-25 09:34:23.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19069282, 19069486), (19069622, 19069681), (19069889, 19069981), (19070099, 19085320), (19070099, 19072356)] 2021-10-25 09:34:23.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028952: ['FBtr0077825', 'FBtr0310547'] 2021-10-25 09:34:23.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040309: ['FBtr0073763', 'FBtr0073764', 'FBtr0339699', 'FBtr0339700', 'FBtr0345161'] 2021-10-25 09:34:23.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2045641, 2045699), (2046011, 2046068), (2046011, 2046065), (2046218, 2046427), (2047639, 2047703)] 2021-10-25 09:34:23.472 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2046427, 2048002, 'FBtr0310547_exon_4') contains intron (2047639, 2047703) 2021-10-25 09:34:23.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310547_exon_4'] 2021-10-25 09:34:23.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7443375, 7443442), (7443382, 7443442)] 2021-10-25 09:34:23.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003390: ['FBtr0070978', 'FBtr0340088', 'FBtr0340089', 'FBtr0340090'] 2021-10-25 09:34:23.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083963: ['FBtr0333927', 'FBtr0301072'] 2021-10-25 09:34:23.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028953: ['FBtr0086921', 'FBtr0086922', 'FBtr0345417', 'FBtr0345418'] 2021-10-25 09:34:23.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13329964, 13331121), (13330030, 13331121), (13330535, 13331121), (13330679, 13331121)] 2021-10-25 09:34:23.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7573403, 7573542), (7573655, 7573834), (7573986, 7574277), (7574416, 7576119), (7576332, 7578381), (7578418, 7578965), (7579358, 7579686), (7579884, 7580798), (7581065, 7596988), (7597152, 7603103), (7603985, 7605110), (7605468, 7638823)] 2021-10-25 09:34:23.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036846: ['FBtr0075026', 'FBtr0330090'] 2021-10-25 09:34:23.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6771659, 6771736), (6771934, 6772004), (6772100, 6773060), (6773249, 6773914), (6773249, 6773965), (6773261, 6773914), (6773261, 6773965), (6774109, 6774182), (6774440, 6774560), (6774962, 6779410)] 2021-10-25 09:34:23.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033174: ['FBtr0088974', 'FBtr0336911'] 2021-10-25 09:34:23.631 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19093320, 19093398), (19093320, 19093662), (19093440, 19093662)] 2021-10-25 09:34:23.632 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.632 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.637 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7447711, 7447786), (7448255, 7448311), (7448619, 7448782), (7448941, 7448993)] 2021-10-25 09:34:23.638 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17457872, 17461993), (17459079, 17461993), (17460666, 17461993)] 2021-10-25 09:34:23.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083965: ['FBtr0110870'] 2021-10-25 09:34:23.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083965 has a single transcript. 2021-10-25 09:34:23.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083966: ['FBtr0110871'] 2021-10-25 09:34:23.648 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083966 has a single transcript. 2021-10-25 09:34:23.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083967: ['FBtr0110878', 'FBtr0344526'] 2021-10-25 09:34:23.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5101044, 5102668), (5103596, 5117576), (5111021, 5117576), (5117638, 5121675), (5121948, 5122195), (5121948, 5122434), (5122249, 5122434), (5122601, 5122660), (5122937, 5123015), (5125622, 5125827), (5127057, 5139358), (5139015, 5139358), (5139673, 5139778), (5140921, 5141652), (5140921, 5141310), (5141517, 5141652), (5141890, 5142002), (5144785, 5146992), (5146703, 5146992), (5147298, 5148730), (5148882, 5154247), (5151941, 5152036), (5152355, 5154247), (5155217, 5155321), (5155534, 5155588), (5155849, 5158454), (5155849, 5157873), (5155849, 5188116), (5155849, 5187606), (5165399, 5187606), (5185964, 5187606), (5187717, 5188116), (5188281, 5188341), (5195460, 5195978), (5196284, 5197866), (5198124, 5199342), (5202302, 5203115), (5202302, 5202764), (5202803, 5203115), (5203742, 5204450), (5204592, 5204835), (5204903, 5205103)] 2021-10-25 09:34:23.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285937: ['FBtr0084104'] 2021-10-25 09:34:23.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285937 has a single transcript. 2021-10-25 09:34:23.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285938: ['FBtr0472671'] 2021-10-25 09:34:23.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285938 has a single transcript. 2021-10-25 09:34:23.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036847: ['FBtr0075034'] 2021-10-25 09:34:23.694 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036847 has a single transcript. 2021-10-25 09:34:23.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033177: ['FBtr0088998', 'FBtr0088999', 'FBtr0345799'] 2021-10-25 09:34:23.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036848: ['FBtr0075033'] 2021-10-25 09:34:23.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036848 has a single transcript. 2021-10-25 09:34:23.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285940: ['FBtr0472677', 'FBtr0472678', 'FBtr0472679', 'FBtr0472680', 'FBtr0472681'] 2021-10-25 09:34:23.708 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22362946, 22363006), (22363287, 22363353), (22364127, 22364196)] 2021-10-25 09:34:23.709 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036849: ['FBtr0075027'] 2021-10-25 09:34:23.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036849 has a single transcript. 2021-10-25 09:34:23.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036850: ['FBtr0075032', 'FBtr0330093'] 2021-10-25 09:34:23.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003391: ['FBtr0071546'] 2021-10-25 09:34:23.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003391 has a single transcript. 2021-10-25 09:34:23.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040318: ['FBtr0075720'] 2021-10-25 09:34:23.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040318 has a single transcript. 2021-10-25 09:34:23.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083968: ['FBtr0110879'] 2021-10-25 09:34:23.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083968 has a single transcript. 2021-10-25 09:34:23.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040319: ['FBtr0071107', 'FBtr0071108', 'FBtr0340138', 'FBtr0340139'] 2021-10-25 09:34:23.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19100002, 19100053), (19100276, 19100343)] 2021-10-25 09:34:23.766 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19100053, 19100355, 'FBtr0075032_exon_1') contains intron (19100276, 19100343) 2021-10-25 09:34:23.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075032_exon_1'] 2021-10-25 09:34:23.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083969: ['FBtr0110888', 'FBtr0335004', 'FBtr0301073'] 2021-10-25 09:34:23.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7461200, 7461255), (7462343, 7462411), (7462696, 7462785)] 2021-10-25 09:34:23.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003392: ['FBtr0111036', 'FBtr0111037', 'FBtr0074118', 'FBtr0074119', 'FBtr0074121', 'FBtr0074122', 'FBtr0074123', 'FBtr0074124', 'FBtr0340413', 'FBtr0301594', 'FBtr0301595', 'FBtr0301596', 'FBtr0301597', 'FBtr0333717', 'FBtr0333718'] 2021-10-25 09:34:23.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028955: ['FBtr0088581', 'FBtr0346631'] 2021-10-25 09:34:23.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:23.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9138570, 9138937), (9139268, 9139353), (9139268, 9139979), (9140298, 9141437)] 2021-10-25 09:34:23.829 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036851: ['FBtr0346533', 'FBtr0330091', 'FBtr0330092'] 2021-10-25 09:34:23.844 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29869793, 29869849), (29870054, 29871238), (29870054, 29871059), (29871149, 29871238), (29871377, 29871445), (29872223, 29872283), (29872484, 29872540), (29872650, 29872704), (29873264, 29873323), (29874142, 29874204), (29874333, 29874410)] 2021-10-25 09:34:23.845 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29872540, 29873264, 'FBtr0110888_exon_6') contains intron (29872650, 29872704) 2021-10-25 09:34:23.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29872540, 29873264, 'FBtr0301073_exon_7') contains intron (29872650, 29872704) 2021-10-25 09:34:23.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110888_exon_6', 'FBtr0301073_exon_7'] 2021-10-25 09:34:23.846 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.851 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8103721, 8103787), (8103969, 8104036), (8105193, 8105267), (8105894, 8106003), (8105894, 8115416), (8105894, 8107689), (8115580, 8115991)] 2021-10-25 09:34:23.852 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8115416, 8116147, 'FBtr0340138_exon_1') contains intron (8115580, 8115991) 2021-10-25 09:34:23.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340138_exon_1'] 2021-10-25 09:34:23.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033178: ['FBtr0088975'] 2021-10-25 09:34:23.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033178 has a single transcript. 2021-10-25 09:34:23.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19108390, 19110092), (19110392, 19112413), (19112519, 19136441), (19136788, 19138877)] 2021-10-25 09:34:23.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028956: ['FBtr0086955', 'FBtr0340211', 'FBtr0340212'] 2021-10-25 09:34:23.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033179: ['FBtr0088997'] 2021-10-25 09:34:23.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033179 has a single transcript. 2021-10-25 09:34:23.905 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330091': ['FBtr0330092']} 2021-10-25 09:34:23.906 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330092']] 2021-10-25 09:34:23.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033183: ['FBtr0088983', 'FBtr0300830', 'FBtr0336918'] 2021-10-25 09:34:23.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083970: ['FBtr0110894'] 2021-10-25 09:34:23.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083970 has a single transcript. 2021-10-25 09:34:23.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036853: ['FBtr0075022', 'FBtr0346548', 'FBtr0333224'] 2021-10-25 09:34:23.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083971: ['FBtr0110905', 'FBtr0308891', 'FBtr0330121'] 2021-10-25 09:34:23.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17448825, 17449110), (17449202, 17449264), (17449459, 17449536), (17449708, 17449768), (17450023, 17450085), (17450262, 17450318), (17450469, 17450528), (17451032, 17452141), (17451032, 17452452), (17451032, 17451088)] 2021-10-25 09:34:23.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:23.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7494797, 7494865), (7495461, 7495525)] 2021-10-25 09:34:23.972 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7494011, 7495461, 'FBtr0300830_exon_2') contains intron (7494797, 7494865) 2021-10-25 09:34:23.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300830_exon_2'] 2021-10-25 09:34:23.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:23.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040321: ['FBtr0076510'] 2021-10-25 09:34:23.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040321 has a single transcript. 2021-10-25 09:34:24.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040322: ['FBtr0075094', 'FBtr0075095', 'FBtr0075096'] 2021-10-25 09:34:24.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19254833, 19254909)] 2021-10-25 09:34:24.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285941: ['FBtr0472682', 'FBtr0472683'] 2021-10-25 09:34:24.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8750713, 8750779), (8754410, 8754486), (8756212, 8767333), (8767794, 8768119)] 2021-10-25 09:34:24.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.059 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0110905': ['FBtr0330121']} 2021-10-25 09:34:24.059 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330121']] 2021-10-25 09:34:24.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033184: ['FBtr0088981'] 2021-10-25 09:34:24.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033184 has a single transcript. 2021-10-25 09:34:24.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028962: ['FBtr0077168'] 2021-10-25 09:34:24.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028962 has a single transcript. 2021-10-25 09:34:24.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033185: ['FBtr0088979', 'FBtr0336925'] 2021-10-25 09:34:24.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18673975, 18674047), (18674104, 18674168), (18674482, 18674544), (18674977, 18675378), (18674977, 18675218), (18675275, 18675337)] 2021-10-25 09:34:24.096 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18675218, 18675413, 'FBtr0075094_exon_1') contains intron (18675275, 18675337) 2021-10-25 09:34:24.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028963: ['FBtr0087781'] 2021-10-25 09:34:24.096 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075094_exon_1'] 2021-10-25 09:34:24.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028963 has a single transcript. 2021-10-25 09:34:24.096 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:24.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028965: ['FBtr0080427'] 2021-10-25 09:34:24.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028965 has a single transcript. 2021-10-25 09:34:24.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028968: ['FBtr0085793', 'FBtr0085794', 'FBtr0301290', 'FBtr0330096'] 2021-10-25 09:34:24.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083972: ['FBtr0110944'] 2021-10-25 09:34:24.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083972 has a single transcript. 2021-10-25 09:34:24.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083973: ['FBtr0110947', 'FBtr0303249'] 2021-10-25 09:34:24.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15892166, 15892827), (15892251, 15892827), (15892360, 15892827), (15892417, 15892827), (15892440, 15892827), (15892569, 15892827), (15892581, 15892827), (15893150, 15894692), (15894766, 15894834), (15895591, 15895661), (15895778, 15895845), (15896074, 15896146), (15896304, 15896365), (15896472, 15897101), (15896472, 15896706), (15896763, 15897101), (15897295, 15898954), (15899074, 15901543), (15899074, 15899443), (15899455, 15900254), (15899455, 15901543), (15900260, 15901543), (15901747, 15901822), (15901916, 15901977), (15902117, 15902189), (15902332, 15905773), (15902332, 15903789)] 2021-10-25 09:34:24.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7515163, 7515219), (7515582, 7515642), (7515906, 7515967)] 2021-10-25 09:34:24.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036856: ['FBtr0074991', 'FBtr0344454'] 2021-10-25 09:34:24.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285943: ['FBtr0087126'] 2021-10-25 09:34:24.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285943 has a single transcript. 2021-10-25 09:34:24.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22151627, 22151753)] 2021-10-25 09:34:24.174 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.180 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19264096, 19264326), (19264622, 19264680), (19265443, 19266593)] 2021-10-25 09:34:24.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040323: ['FBtr0075050'] 2021-10-25 09:34:24.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040323 has a single transcript. 2021-10-25 09:34:24.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033186: ['FBtr0088960'] 2021-10-25 09:34:24.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033186 has a single transcript. 2021-10-25 09:34:24.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261837: ['FBtr0346907'] 2021-10-25 09:34:24.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31572278, 31572500), (31572278, 31572497), (31573156, 31573253), (31574724, 31574800), (31574986, 31575044), (31575197, 31575255)] 2021-10-25 09:34:24.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261837 has a single transcript. 2021-10-25 09:34:24.207 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31572142, 31573156, 'FBtr0085794_exon_1') contains intron (31572278, 31572500) 2021-10-25 09:34:24.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085794_exon_1'] 2021-10-25 09:34:24.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033187: ['FBtr0088904'] 2021-10-25 09:34:24.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033187 has a single transcript. 2021-10-25 09:34:24.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040324: ['FBtr0089075', 'FBtr0089076', 'FBtr0089077'] 2021-10-25 09:34:24.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261838: ['FBtr0303402'] 2021-10-25 09:34:24.220 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261838 has a single transcript. 2021-10-25 09:34:24.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033188: ['FBtr0088956', 'FBtr0088957', 'FBtr0088958', 'FBtr0336939'] 2021-10-25 09:34:24.224 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0301290': ['FBtr0330096']} 2021-10-25 09:34:24.225 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330096']] 2021-10-25 09:34:24.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083974: ['FBtr0110954'] 2021-10-25 09:34:24.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083974 has a single transcript. 2021-10-25 09:34:24.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261839: ['FBtr0303405', 'FBtr0433509'] 2021-10-25 09:34:24.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036857: ['FBtr0075017'] 2021-10-25 09:34:24.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036857 has a single transcript. 2021-10-25 09:34:24.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083975: ['FBtr0301074', 'FBtr0301075', 'FBtr0301680', 'FBtr0346343'] 2021-10-25 09:34:24.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036858: ['FBtr0309116'] 2021-10-25 09:34:24.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036858 has a single transcript. 2021-10-25 09:34:24.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036859: ['FBtr0074992'] 2021-10-25 09:34:24.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036859 has a single transcript. 2021-10-25 09:34:24.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036860: ['FBtr0344806'] 2021-10-25 09:34:24.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036860 has a single transcript. 2021-10-25 09:34:24.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(571863, 573612), (571966, 573612), (572171, 573612), (574428, 575334), (575645, 575701), (576325, 576978)] 2021-10-25 09:34:24.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036861: ['FBtr0075015'] 2021-10-25 09:34:24.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036861 has a single transcript. 2021-10-25 09:34:24.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21366338, 21366449), (21366761, 21366973), (21367209, 21367362), (21367693, 21367909)] 2021-10-25 09:34:24.280 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21367362, 21367978, 'FBtr0303405_exon_4') contains intron (21367693, 21367909) 2021-10-25 09:34:24.280 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21367693, 'FBtr0433509_exon_1') contains intron (21366338, 21366449) 2021-10-25 09:34:24.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303405_exon_4', 'FBtr0433509_exon_1'] 2021-10-25 09:34:24.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036862: ['FBtr0075014', 'FBtr0331425', 'FBtr0332155', 'FBtr0345390'] 2021-10-25 09:34:24.319 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7527072, 7527139), (7527976, 7529027), (7527976, 7532752), (7527976, 7530585), (7527976, 7529190)] 2021-10-25 09:34:24.320 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.320 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028969: ['FBtr0070371', 'FBtr0301926'] 2021-10-25 09:34:24.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20204978, 20206178), (20204978, 20206197), (20206715, 20211080), (20211505, 20211746), (20211964, 20212462), (20212612, 20212733), (20213167, 20213530), (20213914, 20216209), (20216643, 20217047), (20217166, 20219848), (20220163, 20226344), (20226854, 20227519), (20228101, 20237890), (20228101, 20237887), (20238377, 20243976)] 2021-10-25 09:34:24.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261840: ['FBtr0303404', 'FBtr0433514'] 2021-10-25 09:34:24.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1859813, 1859870), (1859982, 1860056), (1860370, 1860426), (1860621, 1860685), (1860624, 1860685), (1861098, 1861155), (1861379, 1861445), (1861485, 1861594)] 2021-10-25 09:34:24.372 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040333: ['FBtr0340092', 'FBtr0300708'] 2021-10-25 09:34:24.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19285100, 19285223), (19285413, 19291479), (19285413, 19288391)] 2021-10-25 09:34:24.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21365680, 21366003), (21366761, 21366973), (21367209, 21367362), (21367693, 21367909), (21368155, 21368379)] 2021-10-25 09:34:24.399 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21367693, 'FBtr0433514_exon_1') contains intron (21365680, 21366003) 2021-10-25 09:34:24.399 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433514_exon_1'] 2021-10-25 09:34:24.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285944: ['FBtr0303704', 'FBtr0303669', 'FBtr0074298', 'FBtr0303689', 'FBtr0303699', 'FBtr0303658', 'FBtr0111022', 'FBtr0303663', 'FBtr0303668', 'FBtr0303690', 'FBtr0303678', 'FBtr0303676', 'FBtr0303674', 'FBtr0303686', 'FBtr0303671', 'FBtr0303673', 'FBtr0303682', 'FBtr0303661', 'FBtr0303660', 'FBtr0303685', 'FBtr0111023', 'FBtr0303706', 'FBtr0303697', 'FBtr0303692', 'FBtr0303665', 'FBtr0303696', 'FBtr0303666', 'FBtr0303657', 'FBtr0303659', 'FBtr0303707', 'FBtr0303684', 'FBtr0290121', 'FBtr0303664', 'FBtr0303688', 'FBtr0303667', 'FBtr0303679', 'FBtr0303694', 'FBtr0303656', 'FBtr0303705', 'FBtr0303675', 'FBtr0303700', 'FBtr0303681', 'FBtr0303698', 'FBtr0303695', 'FBtr0303670', 'FBtr0303672', 'FBtr0303703', 'FBtr0331170', 'FBtr0303701', 'FBtr0303680', 'FBtr0303655', 'FBtr0303691', 'FBtr0303702', 'FBtr0303662', 'FBtr0303683', 'FBtr0303693', 'FBtr0303677', 'FBtr0303687', 'FBtr0342746', 'FBtr0344944'] 2021-10-25 09:34:24.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2622341, 2622434), (2623514, 2623594)] 2021-10-25 09:34:24.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2622068, 2623514, 'FBtr0340092_exon_2') contains intron (2622341, 2622434) 2021-10-25 09:34:24.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340092_exon_2'] 2021-10-25 09:34:24.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028970: ['FBtr0077631'] 2021-10-25 09:34:24.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028970 has a single transcript. 2021-10-25 09:34:24.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028974: ['FBtr0074404'] 2021-10-25 09:34:24.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028974 has a single transcript. 2021-10-25 09:34:24.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028978: ['FBtr0078235'] 2021-10-25 09:34:24.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028978 has a single transcript. 2021-10-25 09:34:24.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033190: ['FBtr0088907'] 2021-10-25 09:34:24.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033190 has a single transcript. 2021-10-25 09:34:24.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028979: ['FBtr0089377', 'FBtr0335391'] 2021-10-25 09:34:24.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033191: ['FBtr0088955'] 2021-10-25 09:34:24.466 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033191 has a single transcript. 2021-10-25 09:34:24.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261841: ['FBtr0303407', 'FBtr0433512'] 2021-10-25 09:34:24.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033192: ['FBtr0088909', 'FBtr0336996'] 2021-10-25 09:34:24.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040334: ['FBtr0070445', 'FBtr0307159'] 2021-10-25 09:34:24.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22020090, 22020687), (22023143, 22023365)] 2021-10-25 09:34:24.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.504 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083976: ['FBtr0110975'] 2021-10-25 09:34:24.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083976 has a single transcript. 2021-10-25 09:34:24.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21366338, 21366449), (21366761, 21366973), (21367693, 21367909)] 2021-10-25 09:34:24.520 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21367693, 'FBtr0433512_exon_1') contains intron (21366338, 21366449) 2021-10-25 09:34:24.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433512_exon_1'] 2021-10-25 09:34:24.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.521 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2618761, 2618868), (2619039, 2619115)] 2021-10-25 09:34:24.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036868: ['FBtr0330281'] 2021-10-25 09:34:24.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036868 has a single transcript. 2021-10-25 09:34:24.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083977: ['FBtr0301076', 'FBtr0301077', 'FBtr0301512', 'FBtr0306243'] 2021-10-25 09:34:24.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036870: ['FBtr0074987'] 2021-10-25 09:34:24.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7540524, 7554842), (7546259, 7554842), (7554964, 7555021), (7555265, 7556787), (7558390, 7558451), (7558621, 7558686), (7559016, 7559073), (7559171, 7559229), (7559630, 7559690), (7560017, 7560080), (7560264, 7560324), (7560484, 7560544), (7560671, 7560733), (7560879, 7560942)] 2021-10-25 09:34:24.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036870 has a single transcript. 2021-10-25 09:34:24.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036871: ['FBtr0074986'] 2021-10-25 09:34:24.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036871 has a single transcript. 2021-10-25 09:34:24.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036872: ['FBtr0074930', 'FBtr0333844'] 2021-10-25 09:34:24.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028980: ['FBtr0077043', 'FBtr0333390'] 2021-10-25 09:34:24.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040336: ['FBtr0070442'] 2021-10-25 09:34:24.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040336 has a single transcript. 2021-10-25 09:34:24.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261842: ['FBtr0303406', 'FBtr0433511'] 2021-10-25 09:34:24.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040337: ['FBtr0070173'] 2021-10-25 09:34:24.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040337 has a single transcript. 2021-10-25 09:34:24.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19472554, 19472609)] 2021-10-25 09:34:24.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040338: ['FBtr0070184'] 2021-10-25 09:34:24.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040338 has a single transcript. 2021-10-25 09:34:24.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033194: ['FBtr0088910', 'FBtr0310024'] 2021-10-25 09:34:24.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040339: ['FBtr0070165'] 2021-10-25 09:34:24.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040339 has a single transcript. 2021-10-25 09:34:24.610 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6055419, 6055576), (6055663, 6055716)] 2021-10-25 09:34:24.611 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.611 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040340: ['FBtr0070167', 'FBtr0070168', 'FBtr0070169', 'FBtr0307182', 'FBtr0332589'] 2021-10-25 09:34:24.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21365680, 21366003), (21366338, 21366449), (21367209, 21367362), (21367693, 21367909)] 2021-10-25 09:34:24.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21367693, 'FBtr0433511_exon_1') contains intron (21365680, 21366003) 2021-10-25 09:34:24.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433511_exon_1'] 2021-10-25 09:34:24.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9262113, 9262169), (9262594, 9262652), (9262598, 9262656), (9263034, 9263780), (9263130, 9263780)] 2021-10-25 09:34:24.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036873: ['FBtr0074984'] 2021-10-25 09:34:24.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036873 has a single transcript. 2021-10-25 09:34:24.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7566883, 7567145), (7566999, 7567145), (7567364, 7568878), (7568965, 7569031), (7569229, 7569299), (7569653, 7569709), (7569931, 7570001), (7570138, 7570199), (7570431, 7570483), (7571999, 7572060), (7572691, 7572746), (7572902, 7572963), (7573306, 7573372), (7573518, 7573581), (7573828, 7573885), (7574158, 7574226), (7574439, 7574498), (7574608, 7574674), (7575274, 7575364), (7575925, 7575986), (7576145, 7576206), (7576815, 7576876), (7577004, 7577061), (7577904, 7577977), (7578350, 7578425), (7579247, 7579309), (7579410, 7579475), (7579614, 7579675), (7579959, 7580030), (7580169, 7580228)] 2021-10-25 09:34:24.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036874: ['FBtr0074982'] 2021-10-25 09:34:24.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036874 has a single transcript. 2021-10-25 09:34:24.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036875: ['FBtr0290043', 'FBtr0290044', 'FBtr0345146', 'FBtr0345147', 'FBtr0333846', 'FBtr0333847'] 2021-10-25 09:34:24.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028981: ['FBtr0086526'] 2021-10-25 09:34:24.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028981 has a single transcript. 2021-10-25 09:34:24.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028982: ['FBtr0070896', 'FBtr0340027'] 2021-10-25 09:34:24.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261843: ['FBtr0303408', 'FBtr0433510'] 2021-10-25 09:34:24.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033195: ['FBtr0088951'] 2021-10-25 09:34:24.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033195 has a single transcript. 2021-10-25 09:34:24.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6267945, 6268106), (6268191, 6268766), (6268972, 6269124), (6269244, 6269313), (6269465, 6269530)] 2021-10-25 09:34:24.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033196: ['FBtr0088950', 'FBtr0088948', 'FBtr0088949', 'FBtr0303287'] 2021-10-25 09:34:24.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(935459, 935580), (935709, 936329), (935838, 936329), (936260, 936329)] 2021-10-25 09:34:24.730 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (935231, 935838, 'FBtr0070167_exon_1') contains intron (935459, 935580) 2021-10-25 09:34:24.730 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (935425, 935709, 'FBtr0070168_exon_1') contains intron (935459, 935580) 2021-10-25 09:34:24.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070167_exon_1', 'FBtr0070168_exon_1'] 2021-10-25 09:34:24.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21365680, 21366003), (21366338, 21366449), (21366761, 21366973), (21367209, 21367362)] 2021-10-25 09:34:24.738 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21366449, 21367209, 'FBtr0303408_exon_3') contains intron (21366761, 21366973) 2021-10-25 09:34:24.738 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21366338, 'FBtr0433510_exon_1') contains intron (21365680, 21366003) 2021-10-25 09:34:24.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303408_exon_3', 'FBtr0433510_exon_1'] 2021-10-25 09:34:24.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028983: ['FBtr0086733'] 2021-10-25 09:34:24.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028983 has a single transcript. 2021-10-25 09:34:24.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028984: ['FBtr0083141', 'FBtr0083142'] 2021-10-25 09:34:24.791 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19493126, 19493499), (19493658, 19494337), (19494421, 19494819), (19494918, 19496550)] 2021-10-25 09:34:24.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083978: ['FBtr0110982'] 2021-10-25 09:34:24.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083978 has a single transcript. 2021-10-25 09:34:24.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261844: ['FBtr0303409', 'FBtr0433513', 'FBtr0445402'] 2021-10-25 09:34:24.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083979: ['FBtr0113487'] 2021-10-25 09:34:24.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083979 has a single transcript. 2021-10-25 09:34:24.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003396: ['FBtr0088098', 'FBtr0088099', 'FBtr0088100', 'FBtr0088101', 'FBtr0330619', 'FBtr0330620'] 2021-10-25 09:34:24.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083981: ['FBtr0308028', 'FBtr0331159', 'FBtr0331160'] 2021-10-25 09:34:24.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7596828, 7596949), (7597060, 7597264), (7597389, 7597468), (7597665, 7598215), (7598357, 7602431), (7602656, 7603121), (7603224, 7603407), (7603519, 7605943), (7606244, 7614460), (7606244, 7613933), (7606244, 7620332), (7606244, 7608421), (7608458, 7613608), (7620439, 7620604)] 2021-10-25 09:34:24.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15203489, 15203549), (15204547, 15206348), (15204550, 15206348)] 2021-10-25 09:34:24.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21365680, 21366003), (21366338, 21366449), (21366761, 21366973), (21367209, 21367362), (21367693, 21367909)] 2021-10-25 09:34:24.864 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21366003, 21366761, 'FBtr0303409_exon_2') contains intron (21366338, 21366449) 2021-10-25 09:34:24.864 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21365608, 21366338, 'FBtr0433513_exon_1') contains intron (21365680, 21366003) 2021-10-25 09:34:24.865 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21367362, 21370249, 'FBtr0433513_exon_4') contains intron (21367693, 21367909) 2021-10-25 09:34:24.865 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303409_exon_2', 'FBtr0433513_exon_1', 'FBtr0433513_exon_4'] 2021-10-25 09:34:24.865 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20593150, 20593386), (20593584, 20597075), (20597177, 20598646), (20597192, 20598646), (20598760, 20604097), (20604899, 20623072)] 2021-10-25 09:34:24.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.886 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331159': ['FBtr0331160']} 2021-10-25 09:34:24.886 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331160']] 2021-10-25 09:34:24.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028986: ['FBtr0081450', 'FBtr0339567'] 2021-10-25 09:34:24.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040341: ['FBtr0070163'] 2021-10-25 09:34:24.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040341 has a single transcript. 2021-10-25 09:34:24.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040342: ['FBtr0070189'] 2021-10-25 09:34:24.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040342 has a single transcript. 2021-10-25 09:34:24.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20836813, 20836873), (20836819, 20836873), (20837012, 20837070), (20837906, 20837961)] 2021-10-25 09:34:24.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083983: ['FBtr0111011'] 2021-10-25 09:34:24.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083983 has a single transcript. 2021-10-25 09:34:24.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040343: ['FBtr0070195', 'FBtr0310459'] 2021-10-25 09:34:24.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083984: ['FBtr0392905', 'FBtr0301007'] 2021-10-25 09:34:24.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11159213, 11190339), (11174805, 11190339), (11183280, 11190339), (11190396, 11208244), (11199001, 11208244), (11204828, 11208244), (11209857, 11209918), (11210629, 11210697), (11210805, 11210872), (11213907, 11213972), (11214199, 11214262)] 2021-10-25 09:34:24.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.955 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.975 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088101': ['FBtr0330620']} 2021-10-25 09:34:24.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261845: ['FBtr0303410', 'FBtr0433515', 'FBtr0445403'] 2021-10-25 09:34:24.975 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330620']] 2021-10-25 09:34:24.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033199: ['FBtr0088946'] 2021-10-25 09:34:24.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033199 has a single transcript. 2021-10-25 09:34:24.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:24.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:24.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:24.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033202: ['FBtr0347154'] 2021-10-25 09:34:24.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033202 has a single transcript. 2021-10-25 09:34:24.999 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21878077, 21878232), (21878419, 21878486), (21878424, 21878486)] 2021-10-25 09:34:25.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028987: ['FBtr0079624'] 2021-10-25 09:34:25.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028987 has a single transcript. 2021-10-25 09:34:25.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033203: ['FBtr0088921', 'FBtr0336999'] 2021-10-25 09:34:25.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036876: ['FBtr0074979', 'FBtr0333845'] 2021-10-25 09:34:25.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028988: ['FBtr0300357'] 2021-10-25 09:34:25.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028988 has a single transcript. 2021-10-25 09:34:25.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028990: ['FBtr0079321', 'FBtr0333351'] 2021-10-25 09:34:25.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21366338, 21366449), (21366761, 21366973), (21367209, 21367362), (21367693, 21367909), (21368155, 21368379)] 2021-10-25 09:34:25.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21366973, 21367693, 'FBtr0303410_exon_3') contains intron (21367209, 21367362) 2021-10-25 09:34:25.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21367362, 21370249, 'FBtr0433515_exon_4') contains intron (21367693, 21367909) 2021-10-25 09:34:25.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21368128, 21370249, 'FBtr0445403_exon_1') contains intron (21368155, 21368379) 2021-10-25 09:34:25.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303410_exon_3', 'FBtr0433515_exon_4', 'FBtr0445403_exon_1'] 2021-10-25 09:34:25.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7662116, 7662165), (7662429, 7662498), (7662915, 7662970)] 2021-10-25 09:34:25.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19499185, 19499255), (19499414, 19499474), (19499558, 19499622), (19499721, 19500537)] 2021-10-25 09:34:25.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040344: ['FBtr0343361', 'FBtr0331303'] 2021-10-25 09:34:25.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083985: ['FBtr0111020', 'FBtr0113489'] 2021-10-25 09:34:25.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:25.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22380201, 22380255)] 2021-10-25 09:34:25.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(923551, 923604), (924618, 924738), (924917, 924972), (925148, 925217), (926633, 926695)] 2021-10-25 09:34:25.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036877: ['FBtr0074978'] 2021-10-25 09:34:25.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036877 has a single transcript. 2021-10-25 09:34:25.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033204: ['FBtr0088922', 'FBtr0337000'] 2021-10-25 09:34:25.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036878: ['FBtr0074977'] 2021-10-25 09:34:25.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036878 has a single transcript. 2021-10-25 09:34:25.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028991: ['FBtr0100501', 'FBtr0344198'] 2021-10-25 09:34:25.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036879: ['FBtr0074933'] 2021-10-25 09:34:25.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036879 has a single transcript. 2021-10-25 09:34:25.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036880: ['FBtr0113180', 'FBtr0332754'] 2021-10-25 09:34:25.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261846: ['FBtr0345167'] 2021-10-25 09:34:25.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261846 has a single transcript. 2021-10-25 09:34:25.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040345: ['FBtr0331301'] 2021-10-25 09:34:25.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7663934, 7664032), (7663963, 7664032), (7664296, 7664352), (7664509, 7664574), (7664834, 7664895)] 2021-10-25 09:34:25.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040345 has a single transcript. 2021-10-25 09:34:25.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261847: ['FBtr0344449', 'FBtr0303412'] 2021-10-25 09:34:25.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083986: ['FBtr0301004'] 2021-10-25 09:34:25.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083986 has a single transcript. 2021-10-25 09:34:25.161 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003401: ['FBtr0072237'] 2021-10-25 09:34:25.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003401 has a single transcript. 2021-10-25 09:34:25.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083987: ['FBtr0111039'] 2021-10-25 09:34:25.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083987 has a single transcript. 2021-10-25 09:34:25.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040346: ['FBtr0070188'] 2021-10-25 09:34:25.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040346 has a single transcript. 2021-10-25 09:34:25.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13179013, 13180989), (13180110, 13180989), (13183234, 13184776), (13185175, 13189560)] 2021-10-25 09:34:25.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083988: ['FBtr0111041'] 2021-10-25 09:34:25.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083988 has a single transcript. 2021-10-25 09:34:25.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040347: ['FBtr0070170'] 2021-10-25 09:34:25.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040347 has a single transcript. 2021-10-25 09:34:25.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003410: ['FBtr0075332', 'FBtr0075333', 'FBtr0344230'] 2021-10-25 09:34:25.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083989: ['FBtr0111042'] 2021-10-25 09:34:25.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083989 has a single transcript. 2021-10-25 09:34:25.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040348: ['FBtr0070187'] 2021-10-25 09:34:25.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040348 has a single transcript. 2021-10-25 09:34:25.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083990: ['FBtr0111044', 'FBtr0111045', 'FBtr0111046', 'FBtr0334622'] 2021-10-25 09:34:25.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040349: ['FBtr0070186'] 2021-10-25 09:34:25.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19521391, 19523236), (19523377, 19526022)] 2021-10-25 09:34:25.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040349 has a single transcript. 2021-10-25 09:34:25.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040350: ['FBtr0070185', 'FBtr0342734'] 2021-10-25 09:34:25.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:25.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033205: ['FBtr0088923'] 2021-10-25 09:34:25.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033205 has a single transcript. 2021-10-25 09:34:25.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033206: ['FBtr0088944'] 2021-10-25 09:34:25.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033206 has a single transcript. 2021-10-25 09:34:25.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16853952, 16854019), (16854525, 16856296), (16855984, 16856296)] 2021-10-25 09:34:25.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16853750, 16854525, 'FBtr0075332_exon_1') contains intron (16853952, 16854019) 2021-10-25 09:34:25.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075332_exon_1'] 2021-10-25 09:34:25.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033207: ['FBtr0088943'] 2021-10-25 09:34:25.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033207 has a single transcript. 2021-10-25 09:34:25.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028992: ['FBtr0083436'] 2021-10-25 09:34:25.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028992 has a single transcript. 2021-10-25 09:34:25.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033208: ['FBtr0088942'] 2021-10-25 09:34:25.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033208 has a single transcript. 2021-10-25 09:34:25.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(949485, 949543), (949671, 949732), (949892, 949957), (950250, 950363), (950599, 950657), (950839, 951196), (951375, 951439)] 2021-10-25 09:34:25.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033209: ['FBtr0088924'] 2021-10-25 09:34:25.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033209 has a single transcript. 2021-10-25 09:34:25.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028993: ['FBtr0339923', 'FBtr0113750', 'FBtr0113751', 'FBtr0113752'] 2021-10-25 09:34:25.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033210: ['FBtr0088941'] 2021-10-25 09:34:25.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033210 has a single transcript. 2021-10-25 09:34:25.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261848: ['FBtr0303416', 'FBtr0339817'] 2021-10-25 09:34:25.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036881: ['FBtr0113181', 'FBtr0332755', 'FBtr0332756'] 2021-10-25 09:34:25.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033212: ['FBtr0088939', 'FBtr0088940', 'FBtr0300779', 'FBtr0300780', 'FBtr0332911', 'FBtr0332912'] 2021-10-25 09:34:25.308 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(975562, 976765), (975906, 976765)] 2021-10-25 09:34:25.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.327 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7331510, 7331580), (7332008, 7332066), (7332011, 7332066)] 2021-10-25 09:34:25.327 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040351: ['FBtr0070183'] 2021-10-25 09:34:25.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040351 has a single transcript. 2021-10-25 09:34:25.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040352: ['FBtr0070567'] 2021-10-25 09:34:25.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040352 has a single transcript. 2021-10-25 09:34:25.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19533095, 19533602), (19536702, 19536761), (19536702, 19536770), (19537105, 19537167), (19537414, 19537808), (19537848, 19537919)] 2021-10-25 09:34:25.348 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19537808, 19538289, 'FBtr0113181_exon_5') contains intron (19537848, 19537919) 2021-10-25 09:34:25.348 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19537808, 19538289, 'FBtr0332755_exon_5') contains intron (19537848, 19537919) 2021-10-25 09:34:25.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003411: ['FBtr0073461'] 2021-10-25 09:34:25.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113181_exon_5', 'FBtr0332755_exon_5'] 2021-10-25 09:34:25.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003411 has a single transcript. 2021-10-25 09:34:25.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040353: ['FBtr0070566'] 2021-10-25 09:34:25.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040353 has a single transcript. 2021-10-25 09:34:25.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040354: ['FBtr0070565', 'FBtr0332495'] 2021-10-25 09:34:25.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24724430, 24728296), (24724430, 24725823), (24726292, 24728296), (24728508, 24734035), (24734187, 24740904), (24741000, 24757360), (24741000, 24748407), (24748494, 24757360)] 2021-10-25 09:34:25.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003415: ['FBtr0078329', 'FBtr0078328', 'FBtr0112830', 'FBtr0333284'] 2021-10-25 09:34:25.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261849: ['FBtr0303417'] 2021-10-25 09:34:25.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261849 has a single transcript. 2021-10-25 09:34:25.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261850: ['FBtr0071576'] 2021-10-25 09:34:25.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261850 has a single transcript. 2021-10-25 09:34:25.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2883467, 2883558), (2883467, 2883551)] 2021-10-25 09:34:25.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261853: ['FBtr0347196', 'FBtr0303428'] 2021-10-25 09:34:25.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7677734, 7678569), (7677734, 7677997), (7678404, 7678569), (7678626, 7678692), (7678806, 7678867), (7679272, 7679341), (7679930, 7680291), (7679930, 7680924), (7680312, 7680924), (7680999, 7681307), (7681470, 7681540), (7681470, 7682525), (7683513, 7683572), (7683906, 7683967), (7684045, 7684112), (7684300, 7684973), (7684300, 7684721), (7684763, 7684973), (7685071, 7685132), (7685294, 7685362), (7685589, 7686543), (7686627, 7686686), (7686627, 7686707), (7686836, 7686903), (7686954, 7688195), (7688293, 7698109), (7688293, 7695088)] 2021-10-25 09:34:25.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7677069, 7678404, 'FBtr0088939_exon_19') contains intron (7677734, 7677997) 2021-10-25 09:34:25.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7677069, 7678404, 'FBtr0088940_exon_8') contains intron (7677734, 7677997) 2021-10-25 09:34:25.444 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7677069, 7678404, 'FBtr0300779_exon_19') contains intron (7677734, 7677997) 2021-10-25 09:34:25.445 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088939_exon_19', 'FBtr0088940_exon_8', 'FBtr0300779_exon_19'] 2021-10-25 09:34:25.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20996087, 20996148), (20996264, 20996323), (20996438, 20996501), (21001281, 21001342), (21001875, 21002016), (21001926, 21002016), (21002197, 21004977), (21002197, 21003735), (21004185, 21004977), (21005662, 21005731), (21006180, 21006556), (21006640, 21006707), (21006801, 21012210), (21012526, 21024951), (21025548, 21026129), (21025548, 21027295), (21025548, 21027139), (21025548, 21026927)] 2021-10-25 09:34:25.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:25.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083991: ['FBtr0111047'] 2021-10-25 09:34:25.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083991 has a single transcript. 2021-10-25 09:34:25.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036882: ['FBtr0074976', 'FBtr0332758'] 2021-10-25 09:34:25.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083992: ['FBtr0110976', 'FBtr0110977', 'FBtr0344094', 'FBtr0344024'] 2021-10-25 09:34:25.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040355: ['FBtr0070546', 'FBtr0113325'] 2021-10-25 09:34:25.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2890883, 2893220), (2893158, 2893220)] 2021-10-25 09:34:25.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19540216, 19540277), (19542180, 19542297), (19542468, 19542534)] 2021-10-25 09:34:25.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028996: ['FBtr0089104', 'FBtr0310610'] 2021-10-25 09:34:25.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261854: ['FBtr0329887', 'FBtr0329888', 'FBtr0329889', 'FBtr0329890', 'FBtr0303429', 'FBtr0303430', 'FBtr0303431', 'FBtr0303432', 'FBtr0303433', 'FBtr0303434', 'FBtr0303435', 'FBtr0303437'] 2021-10-25 09:34:25.558 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(183702, 183757), (184067, 184131), (184072, 184131), (184072, 184317), (184260, 184317)] 2021-10-25 09:34:25.559 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (184131, 184540, 'FBtr0344024_exon_1') contains intron (184260, 184317) 2021-10-25 09:34:25.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344024_exon_1'] 2021-10-25 09:34:25.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040356: ['FBtr0070489'] 2021-10-25 09:34:25.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040356 has a single transcript. 2021-10-25 09:34:25.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(601529, 601756), (601935, 603311), (604252, 605002), (606744, 607436)] 2021-10-25 09:34:25.566 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (605002, 607649, 'FBtr0089104_exon_1') contains intron (606744, 607436) 2021-10-25 09:34:25.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089104_exon_1'] 2021-10-25 09:34:25.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040357: ['FBtr0070204'] 2021-10-25 09:34:25.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040357 has a single transcript. 2021-10-25 09:34:25.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036886: ['FBtr0074938'] 2021-10-25 09:34:25.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036886 has a single transcript. 2021-10-25 09:34:25.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040358: ['FBtr0070202'] 2021-10-25 09:34:25.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040358 has a single transcript. 2021-10-25 09:34:25.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036887: ['FBtr0074972', 'FBtr0344994'] 2021-10-25 09:34:25.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040359: ['FBtr0070201', 'FBtr0345506'] 2021-10-25 09:34:25.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003416: ['FBtr0074230'] 2021-10-25 09:34:25.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003416 has a single transcript. 2021-10-25 09:34:25.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003423: ['FBtr0077207', 'FBtr0077208', 'FBtr0077209', 'FBtr0077210', 'FBtr0077203', 'FBtr0077204', 'FBtr0077205', 'FBtr0077206', 'FBtr0307524', 'FBtr0307525', 'FBtr0307526', 'FBtr0307527', 'FBtr0307528', 'FBtr0307529'] 2021-10-25 09:34:25.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028997: ['FBtr0082083'] 2021-10-25 09:34:25.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028997 has a single transcript. 2021-10-25 09:34:25.645 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19585684, 19585748)] 2021-10-25 09:34:25.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0028999: ['FBtr0072592'] 2021-10-25 09:34:25.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0028999 has a single transcript. 2021-10-25 09:34:25.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1191713, 1194197), (1194595, 1194663)] 2021-10-25 09:34:25.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029002: ['FBtr0072506', 'FBtr0332836', 'FBtr0332837', 'FBtr0332838', 'FBtr0332839'] 2021-10-25 09:34:25.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033214: ['FBtr0088927', 'FBtr0339114', 'FBtr0339115', 'FBtr0339116'] 2021-10-25 09:34:25.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036888: ['FBtr0074940'] 2021-10-25 09:34:25.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036888 has a single transcript. 2021-10-25 09:34:25.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036889: ['FBtr0074971'] 2021-10-25 09:34:25.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036889 has a single transcript. 2021-10-25 09:34:25.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040360: ['FBtr0070200'] 2021-10-25 09:34:25.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040360 has a single transcript. 2021-10-25 09:34:25.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036890: ['FBtr0074942', 'FBtr0074944', 'FBtr0336786'] 2021-10-25 09:34:25.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040361: ['FBtr0070199', 'FBtr0310612'] 2021-10-25 09:34:25.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0083994: ['FBtr0332615'] 2021-10-25 09:34:25.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0083994 has a single transcript. 2021-10-25 09:34:25.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0084001: ['FBtr0332199', 'FBtr0332200'] 2021-10-25 09:34:25.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(271507, 273549), (271791, 273549), (273390, 273549), (274030, 274103), (274241, 274594), (274250, 274594), (274807, 274866), (274813, 274866)] 2021-10-25 09:34:25.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1181801, 1182101), (1182030, 1182101)] 2021-10-25 09:34:25.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.787 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.795 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19601976, 19602041), (19602060, 19602670), (19602060, 19602655)] 2021-10-25 09:34:25.796 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19602041, 19604120, 'FBtr0336786_exon_2') contains intron (19602060, 19602670) 2021-10-25 09:34:25.795 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7709935, 7710456), (7710063, 7710456), (7710351, 7710456), (7710644, 7710695), (7710793, 7710848), (7710980, 7711074), (7711416, 7711476), (7711676, 7711742)] 2021-10-25 09:34:25.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336786_exon_2'] 2021-10-25 09:34:25.796 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.802 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22038961, 22039036), (22039183, 22039234)] 2021-10-25 09:34:25.802 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22039036, 22039772, 'FBtr0332200_exon_2') contains intron (22039183, 22039234) 2021-10-25 09:34:25.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332200_exon_2'] 2021-10-25 09:34:25.803 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14945227, 14946149), (14946090, 14946149), (14946417, 14946476), (14946603, 14947178), (14946603, 14946703), (14946819, 14947641), (14946819, 14947178), (14947300, 14947641), (14947836, 14947893), (14948850, 14948916), (14949002, 14949373), (14949424, 14949659), (14949424, 14949558), (14949424, 14950686), (14949424, 14961385), (14949424, 14951634), (14952568, 14953086), (14952589, 14953086), (14953655, 14958243), (14961506, 14961567), (14961841, 14962694), (14961841, 14962816), (14961841, 14962886)] 2021-10-25 09:34:25.829 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14945113, 14946417, 'FBtr0329887_exon_10') contains intron (14945227, 14946149) 2021-10-25 09:34:25.830 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14945113, 14946417, 'FBtr0329889_exon_8') contains intron (14945227, 14946149) 2021-10-25 09:34:25.831 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14945113, 14946417, 'FBtr0303431_exon_10') contains intron (14945227, 14946149) 2021-10-25 09:34:25.831 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14945113, 14946417, 'FBtr0303433_exon_8') contains intron (14945227, 14946149) 2021-10-25 09:34:25.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0329887_exon_10', 'FBtr0329889_exon_8', 'FBtr0303431_exon_10', 'FBtr0303433_exon_8'] 2021-10-25 09:34:25.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040362: ['FBtr0070198', 'FBtr0342727'] 2021-10-25 09:34:25.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0084008: ['FBtr0308117', 'FBtr0335256', 'FBtr0335257'] 2021-10-25 09:34:25.875 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329889': ['FBtr0303433']} 2021-10-25 09:34:25.876 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0303433']] 2021-10-25 09:34:25.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:25.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036891: ['FBtr0074945'] 2021-10-25 09:34:25.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036891 has a single transcript. 2021-10-25 09:34:25.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036892: ['FBtr0074967', 'FBtr0273410'] 2021-10-25 09:34:25.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21374124, 21376119), (21374459, 21376119), (21374459, 21374657), (21374740, 21376119), (21374821, 21376119), (21375493, 21376119), (21376666, 21379972), (21376666, 21379587), (21379709, 21380650), (21380094, 21380650), (21380737, 21380881), (21381063, 21382179), (21381063, 21381733), (21381769, 21382179), (21382244, 21382548), (21382727, 21382793), (21382968, 21383029), (21383383, 21383449), (21383627, 21383699)] 2021-10-25 09:34:25.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21374311, 21374821, 'FBtr0077210_exon_1') contains intron (21374459, 21374657) 2021-10-25 09:34:25.924 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21374311, 21374740, 'FBtr0077203_exon_1') contains intron (21374459, 21374657) 2021-10-25 09:34:25.924 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21374311, 21374740, 'FBtr0077204_exon_1') contains intron (21374459, 21374657) 2021-10-25 09:34:25.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21374311, 21374740, 'FBtr0077205_exon_1') contains intron (21374459, 21374657) 2021-10-25 09:34:25.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21374311, 21374740, 'FBtr0077206_exon_1') contains intron (21374459, 21374657) 2021-10-25 09:34:25.927 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077210_exon_1', 'FBtr0077203_exon_1', 'FBtr0077204_exon_1', 'FBtr0077205_exon_1', 'FBtr0077206_exon_1'] 2021-10-25 09:34:25.927 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029003: ['FBtr0070890'] 2021-10-25 09:34:25.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029003 has a single transcript. 2021-10-25 09:34:25.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5254465, 5254520), (5254465, 5254528)] 2021-10-25 09:34:25.943 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5253944, 5255295, 'FBtr0308117_exon_1') contains intron (5254465, 5254520) 2021-10-25 09:34:25.943 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308117_exon_1'] 2021-10-25 09:34:25.943 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16464792, 16466494), (16466799, 16471213), (16471484, 16473581), (16473827, 16474446), (16474641, 16475627), (16475750, 16480679), (16475750, 16477448), (16475750, 16481325), (16477571, 16481325), (16480802, 16481325), (16481499, 16482625), (16481499, 16486379), (16483033, 16483677), (16483108, 16483677), (16483859, 16486340), (16483859, 16486379), (16483889, 16486340), (16483889, 16486379), (16486584, 16486717), (16486905, 16488986), (16486905, 16489342), (16486905, 16487882), (16488045, 16489342), (16489149, 16489342), (16489516, 16489599), (16489853, 16492446), (16489877, 16492446), (16492515, 16498269), (16498369, 16498444), (16498656, 16498715), (16498896, 16500506), (16498896, 16503989), (16498896, 16504061), (16500569, 16503989), (16500569, 16504061), (16504298, 16505506), (16505816, 16505970), (16506247, 16506347), (16506247, 16513714), (16506439, 16513714), (16506439, 16509575), (16509704, 16513714), (16513920, 16514028), (16514184, 16518804), (16514184, 16521622), (16514184, 16521625), (16518837, 16521622), (16521813, 16522064), (16522153, 16527276), (16527899, 16533058)] 2021-10-25 09:34:25.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033215: ['FBtr0088928'] 2021-10-25 09:34:25.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033215 has a single transcript. 2021-10-25 09:34:25.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029006: ['FBtr0086833', 'FBtr0333168'] 2021-10-25 09:34:25.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19608668, 19608731), (19608921, 19608980), (19609709, 19609765), (19610188, 19610251), (19610556, 19610614), (19610744, 19610801), (19611207, 19611324), (19611261, 19611324), (19611580, 19611743)] 2021-10-25 09:34:25.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040363: ['FBtr0070251'] 2021-10-25 09:34:25.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040363 has a single transcript. 2021-10-25 09:34:25.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033216: ['FBtr0088929'] 2021-10-25 09:34:25.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033216 has a single transcript. 2021-10-25 09:34:25.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033221: ['FBtr0088829'] 2021-10-25 09:34:25.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033221 has a single transcript. 2021-10-25 09:34:25.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.970 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:25.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040364: ['FBtr0070197', 'FBtr0310611', 'FBtr0345513'] 2021-10-25 09:34:25.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033222: ['FBtr0088830', 'FBtr0113050'] 2021-10-25 09:34:25.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17593312, 17593467), (17593904, 17593965), (17594004, 17599849), (17600086, 17600141), (17602347, 17602403), (17602603, 17602662), (17602826, 17602901)] 2021-10-25 09:34:25.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:25.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036893: ['FBtr0074946'] 2021-10-25 09:34:26.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036893 has a single transcript. 2021-10-25 09:34:26.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036895: ['FBtr0074948'] 2021-10-25 09:34:26.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036895 has a single transcript. 2021-10-25 09:34:26.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7790498, 7790556), (7790636, 7790692), (7790825, 7790878)] 2021-10-25 09:34:26.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7790556, 7790825, 'FBtr0088830_exon_2') contains intron (7790636, 7790692) 2021-10-25 09:34:26.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088830_exon_2'] 2021-10-25 09:34:26.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036896: ['FBtr0074963', 'FBtr0074964', 'FBtr0074965', 'FBtr0302513'] 2021-10-25 09:34:26.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1171171, 1171269), (1171698, 1171815)] 2021-10-25 09:34:26.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.037 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0084017: ['FBtr0336866'] 2021-10-25 09:34:26.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0084017 has a single transcript. 2021-10-25 09:34:26.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029067: ['FBtr0077226', 'FBtr0339623', 'FBtr0339624'] 2021-10-25 09:34:26.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0084049: ['FBtr0111304'] 2021-10-25 09:34:26.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0084049 has a single transcript. 2021-10-25 09:34:26.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085188: ['FBtr0112350'] 2021-10-25 09:34:26.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085188 has a single transcript. 2021-10-25 09:34:26.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085190: ['FBtr0112352', 'FBtr0301006', 'FBtr0301005'] 2021-10-25 09:34:26.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033224: ['FBtr0088901', 'FBtr0088902', 'FBtr0088900'] 2021-10-25 09:34:26.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21321513, 21321904), (21321513, 21321636), (21321819, 21321904), (21322153, 21323130), (21322162, 21323130)] 2021-10-25 09:34:26.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.118 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19625944, 19626011), (19626910, 19627230), (19627384, 19627443), (19628097, 19628151), (19628343, 19629264), (19629753, 19632366), (19629753, 19634231), (19634463, 19635421), (19634463, 19635430), (19634463, 19635480)] 2021-10-25 09:34:26.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040365: ['FBtr0070180'] 2021-10-25 09:34:26.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040365 has a single transcript. 2021-10-25 09:34:26.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040366: ['FBtr0070250', 'FBtr0345522'] 2021-10-25 09:34:26.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10581205, 10581260), (10581355, 10581423), (10581370, 10581423), (10581440, 10581501)] 2021-10-25 09:34:26.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7801568, 7801985), (7802118, 7802180), (7803201, 7803511), (7804938, 7805100), (7804938, 7805421), (7804938, 7806225)] 2021-10-25 09:34:26.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1214792, 1214942)] 2021-10-25 09:34:26.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029079: ['FBtr0086832'] 2021-10-25 09:34:26.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029079 has a single transcript. 2021-10-25 09:34:26.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029082: ['FBtr0087413', 'FBtr0087414', 'FBtr0345419'] 2021-10-25 09:34:26.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040367: ['FBtr0070205', 'FBtr0342728'] 2021-10-25 09:34:26.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033225: ['FBtr0088899'] 2021-10-25 09:34:26.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033225 has a single transcript. 2021-10-25 09:34:26.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085191: ['FBtr0302420'] 2021-10-25 09:34:26.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085191 has a single transcript. 2021-10-25 09:34:26.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261856: ['FBtr0303442'] 2021-10-25 09:34:26.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261856 has a single transcript. 2021-10-25 09:34:26.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036897: ['FBtr0074962', 'FBtr0290116', 'FBtr0306354', 'FBtr0331862'] 2021-10-25 09:34:26.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033226: ['FBtr0088834', 'FBtr0088835', 'FBtr0088836', 'FBtr0088837', 'FBtr0339119', 'FBtr0339120', 'FBtr0345697'] 2021-10-25 09:34:26.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261857: ['FBtr0303443'] 2021-10-25 09:34:26.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261857 has a single transcript. 2021-10-25 09:34:26.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085192: ['FBtr0112354', 'FBtr0310150'] 2021-10-25 09:34:26.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15011830, 15035980), (15036508, 15036604), (15036775, 15036863), (15037154, 15037356), (15037656, 15037782), (15038073, 15038132), (15038435, 15038508), (15038793, 15038869), (15039151, 15039247), (15040050, 15040116), (15040050, 15040137), (15040521, 15040750)] 2021-10-25 09:34:26.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261858: ['FBtr0303463'] 2021-10-25 09:34:26.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261858 has a single transcript. 2021-10-25 09:34:26.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.290 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074298': ['FBtr0331170']} 2021-10-25 09:34:26.290 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331170']] 2021-10-25 09:34:26.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261859: ['FBtr0303485', 'FBtr0303486'] 2021-10-25 09:34:26.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:26.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11988329, 11988386), (11988329, 11988383)] 2021-10-25 09:34:26.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15100188, 15100245), (15100423, 15100488), (15100426, 15100488), (15100638, 15100736), (15100881, 15100945), (15101205, 15101282), (15101531, 15101592), (15102028, 15102087), (15102204, 15111592), (15112189, 15131607)] 2021-10-25 09:34:26.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19638545, 19639883), (19640318, 19641064), (19640984, 19641064), (19641218, 19641893), (19642024, 19642351)] 2021-10-25 09:34:26.352 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19637206, 19640318, 'FBtr0331862_exon_4') contains intron (19638545, 19639883) 2021-10-25 09:34:26.352 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331862_exon_4'] 2021-10-25 09:34:26.352 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040368: ['FBtr0070252'] 2021-10-25 09:34:26.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040368 has a single transcript. 2021-10-25 09:34:26.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040370: ['FBtr0070103', 'FBtr0300326', 'FBtr0342963'] 2021-10-25 09:34:26.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085193: ['FBtr0112355', 'FBtr0342598'] 2021-10-25 09:34:26.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029084: ['FBtr0071766'] 2021-10-25 09:34:26.381 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029084 has a single transcript. 2021-10-25 09:34:26.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029088: ['FBtr0078665'] 2021-10-25 09:34:26.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029088 has a single transcript. 2021-10-25 09:34:26.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029091: ['FBtr0308081', 'FBtr0334089'] 2021-10-25 09:34:26.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261860: ['FBtr0310471', 'FBtr0310472'] 2021-10-25 09:34:26.413 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7812691, 7813280), (7812732, 7813280), (7812992, 7813280), (7813197, 7813280)] 2021-10-25 09:34:26.415 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7813077, 7814745, 'FBtr0339119_exon_1') contains intron (7813197, 7813280) 2021-10-25 09:34:26.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339119_exon_1'] 2021-10-25 09:34:26.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12056432, 12056498), (12057147, 12057214)] 2021-10-25 09:34:26.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(286891, 286948), (287041, 287328), (287526, 289040), (289272, 289870), (289272, 290252), (289943, 290252), (290596, 294822), (290596, 294712)] 2021-10-25 09:34:26.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21962477, 21962539), (21962781, 21962842), (21962781, 21962839), (21963012, 21963480), (21963607, 21963708), (21963915, 21964402), (21964578, 21964687), (21965251, 21966067), (21966317, 21967125), (21968355, 21968501)] 2021-10-25 09:34:26.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26783887, 26783950), (26784083, 26784159), (26784106, 26784159)] 2021-10-25 09:34:26.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085194: ['FBtr0112356', 'FBtr0343707'] 2021-10-25 09:34:26.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036899: ['FBtr0074960', 'FBtr0273407', 'FBtr0331860', 'FBtr0331861'] 2021-10-25 09:34:26.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029092: ['FBtr0088548', 'FBtr0088549', 'FBtr0088550', 'FBtr0306808', 'FBtr0339384'] 2021-10-25 09:34:26.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261861: ['FBtr0445672', 'FBtr0445673'] 2021-10-25 09:34:26.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14713840, 14713931)] 2021-10-25 09:34:26.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040371: ['FBtr0070069'] 2021-10-25 09:34:26.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040371 has a single transcript. 2021-10-25 09:34:26.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040372: ['FBtr0070063', 'FBtr0332992'] 2021-10-25 09:34:26.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26784644, 26784703)] 2021-10-25 09:34:26.569 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26784337, 26785753, 'FBtr0445672_exon_1') contains intron (26784644, 26784703) 2021-10-25 09:34:26.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445672_exon_1'] 2021-10-25 09:34:26.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085195: ['FBtr0112357', 'FBtr0301737', 'FBtr0343708', 'FBtr0345461'] 2021-10-25 09:34:26.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19651227, 19651470), (19651231, 19651470), (19651231, 19651413), (19651711, 19652147), (19652418, 19652646), (19652950, 19653067), (19653226, 19653289), (19653915, 19656809), (19656963, 19657095), (19657341, 19663873), (19657341, 19663278), (19657371, 19663278)] 2021-10-25 09:34:26.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(247596, 248381), (250238, 250293), (250535, 250625), (250993, 251049), (251291, 251350), (251541, 251601), (251763, 251822), (252360, 252429), (252803, 253068)] 2021-10-25 09:34:26.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.583 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (251350, 251763, 'FBtr0332992_exon_6') contains intron (251541, 251601) 2021-10-25 09:34:26.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332992_exon_6'] 2021-10-25 09:34:26.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003429: ['FBtr0084683', 'FBtr0084685', 'FBtr0084684', 'FBtr0100622', 'FBtr0100623', 'FBtr0100624', 'FBtr0100627', 'FBtr0100629', 'FBtr0100631', 'FBtr0100632', 'FBtr0100633', 'FBtr0100634', 'FBtr0100635', 'FBtr0100636', 'FBtr0100637', 'FBtr0100638', 'FBtr0301581', 'FBtr0301582', 'FBtr0330286', 'FBtr0330287', 'FBtr0334294', 'FBtr0334295', 'FBtr0334296'] 2021-10-25 09:34:26.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9435325, 9435393), (9435334, 9435393), (9435524, 9435585), (9435993, 9436050), (9436292, 9436361), (9436798, 9437419), (9437732, 9441191), (9437732, 9441506), (9437732, 9444672), (9437732, 9440701)] 2021-10-25 09:34:26.600 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.600 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261862: ['FBtr0088308', 'FBtr0301282', 'FBtr0088307', 'FBtr0301281'] 2021-10-25 09:34:26.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040373: ['FBtr0070107', 'FBtr0070108', 'FBtr0340207'] 2021-10-25 09:34:26.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14743307, 14743381)] 2021-10-25 09:34:26.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033229: ['FBtr0088841', 'FBtr0088842'] 2021-10-25 09:34:26.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10469885, 10469945), (10470305, 10470367), (10470749, 10471439), (10470749, 10471213), (10471273, 10471617), (10471505, 10471617), (10471956, 10472015), (10472215, 10472474), (10473212, 10473268), (10473450, 10475254), (10473450, 10478359)] 2021-10-25 09:34:26.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(245009, 245096), (245346, 245411), (245578, 245679)] 2021-10-25 09:34:26.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (244060, 245346, 'FBtr0070107_exon_3') contains intron (245009, 245096) 2021-10-25 09:34:26.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (244060, 245346, 'FBtr0070108_exon_2') contains intron (245009, 245096) 2021-10-25 09:34:26.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (245411, 245856, 'FBtr0070108_exon_1') contains intron (245578, 245679) 2021-10-25 09:34:26.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (245411, 245856, 'FBtr0340207_exon_1') contains intron (245578, 245679) 2021-10-25 09:34:26.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070107_exon_3', 'FBtr0070108_exon_2', 'FBtr0070108_exon_1', 'FBtr0340207_exon_1'] 2021-10-25 09:34:26.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036900: ['FBtr0089597', 'FBtr0089598', 'FBtr0331859'] 2021-10-25 09:34:26.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7832365, 7832455), (7832642, 7832701), (7833176, 7833230)] 2021-10-25 09:34:26.743 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7832701, 7833841, 'FBtr0088841_exon_3') contains intron (7833176, 7833230) 2021-10-25 09:34:26.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088841_exon_3'] 2021-10-25 09:34:26.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029093: ['FBtr0088898', 'FBtr0452079', 'FBtr0452080'] 2021-10-25 09:34:26.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033232: ['FBtr0088888', 'FBtr0088889'] 2021-10-25 09:34:26.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19685678, 19685737), (19685891, 19685957), (19686640, 19686794), (19686646, 19686794), (19686936, 19686994), (19687085, 19687147)] 2021-10-25 09:34:26.805 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19686994, 19687353, 'FBtr0089597_exon_1') contains intron (19687085, 19687147) 2021-10-25 09:34:26.805 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19686994, 19687353, 'FBtr0331859_exon_1') contains intron (19687085, 19687147) 2021-10-25 09:34:26.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089597_exon_1', 'FBtr0331859_exon_1'] 2021-10-25 09:34:26.805 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085196: ['FBtr0112358'] 2021-10-25 09:34:26.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085196 has a single transcript. 2021-10-25 09:34:26.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085197: ['FBtr0112359'] 2021-10-25 09:34:26.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085197 has a single transcript. 2021-10-25 09:34:26.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040375: ['FBtr0300707', 'FBtr0308567'] 2021-10-25 09:34:26.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085198: ['FBtr0112360'] 2021-10-25 09:34:26.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085198 has a single transcript. 2021-10-25 09:34:26.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085199: ['FBtr0112361', 'FBtr0339799'] 2021-10-25 09:34:26.856 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7815726, 7822110), (7822485, 7822548)] 2021-10-25 09:34:26.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.856 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7915182, 7915394), (7915521, 7915900)] 2021-10-25 09:34:26.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.857 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.857 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261871: ['FBtr0340553', 'FBtr0340554'] 2021-10-25 09:34:26.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2584395, 2584462), (2584548, 2584666), (2584602, 2584666), (2584935, 2584997), (2585412, 2585650)] 2021-10-25 09:34:26.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:26.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10918018, 10918113), (10918211, 10918744), (10918988, 10923146), (10923279, 10923592), (10923670, 10925238), (10925510, 10961085), (10961367, 10963926), (10961367, 10963225)] 2021-10-25 09:34:26.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036905: ['FBtr0074950'] 2021-10-25 09:34:26.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036905 has a single transcript. 2021-10-25 09:34:26.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033233: ['FBtr0088886', 'FBtr0309844'] 2021-10-25 09:34:26.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036906: ['FBtr0074928'] 2021-10-25 09:34:26.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036906 has a single transcript. 2021-10-25 09:34:26.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036908: ['FBtr0074927', 'FBtr0333878'] 2021-10-25 09:34:26.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040376: ['FBtr0070437', 'FBtr0302447', 'FBtr0302448', 'FBtr0302449'] 2021-10-25 09:34:26.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085200: ['FBtr0305066', 'FBtr0344147'] 2021-10-25 09:34:26.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029094: ['FBtr0074947', 'FBtr0302381'] 2021-10-25 09:34:26.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7923612, 7923668), (7923612, 7923686), (7924532, 7924597), (7924689, 7924760)] 2021-10-25 09:34:26.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19804232, 19804287), (19804409, 19804476)] 2021-10-25 09:34:26.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:26.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:26.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261872: ['FBtr0301554', 'FBtr0091474', 'FBtr0345067'] 2021-10-25 09:34:27.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18378852, 18378905), (18379179, 18379241), (18379183, 18379241)] 2021-10-25 09:34:27.017 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:27.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.023 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2581112, 2582988), (2582575, 2582988), (2582826, 2582988), (2582826, 2583008)] 2021-10-25 09:34:27.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036909: ['FBtr0074879', 'FBtr0074880', 'FBtr0344256'] 2021-10-25 09:34:27.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033234: ['FBtr0088849', 'FBtr0309843', 'FBtr0304751'] 2021-10-25 09:34:27.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17037030, 17037083), (17037255, 17037319), (17037634, 17037705), (17037873, 17037930), (17038932, 17038994), (17039193, 17039256), (17039333, 17039555), (17039630, 17040438), (17039630, 17040137), (17040210, 17040438), (17040601, 17041693), (17042040, 17042102), (17042273, 17042437)] 2021-10-25 09:34:27.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.075 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029095: ['FBtr0078033', 'FBtr0078031', 'FBtr0078032'] 2021-10-25 09:34:27.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085201: ['FBtr0112363', 'FBtr0308188', 'FBtr0330663', 'FBtr0331650'] 2021-10-25 09:34:27.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19806237, 19806305), (19806237, 19806294), (19806452, 19806509), (19806632, 19806685)] 2021-10-25 09:34:27.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19805180, 19806452, 'FBtr0074879_exon_1') contains intron (19806237, 19806305) 2021-10-25 09:34:27.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074879_exon_1'] 2021-10-25 09:34:27.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7926780, 7928085), (7928027, 7928085), (7928295, 7928358), (7928813, 7928875)] 2021-10-25 09:34:27.129 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7927505, 7928295, 'FBtr0304751_exon_1') contains intron (7928027, 7928085) 2021-10-25 09:34:27.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304751_exon_1'] 2021-10-25 09:34:27.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24662563, 24664363), (24664795, 24669540), (24664795, 24664896), (24665085, 24669540), (24665424, 24669540), (24668909, 24669540), (24669879, 24674410), (24674569, 24674769), (24674881, 24675166), (24675318, 24675632), (24675800, 24677243), (24675800, 24682307), (24675800, 24679485), (24677335, 24687186), (24679577, 24687186), (24682399, 24687186), (24687297, 24689321), (24687297, 24687799), (24687905, 24691459), (24689427, 24691459), (24691612, 24691777), (24691933, 24692203), (24691933, 24693771), (24692316, 24694956), (24693884, 24694956), (24695115, 24695340), (24695417, 24699375), (24695417, 24698197), (24695417, 24703117), (24695417, 24696090), (24696126, 24703020), (24696126, 24703117), (24696126, 24702087), (24698269, 24702087), (24698269, 24703020), (24698269, 24703117), (24699426, 24703117), (24699426, 24702087), (24699426, 24700705), (24699426, 24703020), (24700729, 24702087), (24702162, 24703020), (24703053, 24703117), (24703307, 24703890), (24703307, 24705551), (24703956, 24705551), (24705729, 24705796), (24706304, 24706536), (24706673, 24706776), (24706919, 24706996), (24707216, 24707272)] 2021-10-25 09:34:27.154 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(862258, 862318), (862498, 862562), (864134, 864194), (864338, 864397), (864794, 867813), (864794, 868031), (864794, 864876), (865060, 865826)] 2021-10-25 09:34:27.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.176 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2192715, 2192777), (2192845, 2192974), (2192848, 2197308), (2192848, 2192922), (2192848, 2192974)] 2021-10-25 09:34:27.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040377: ['FBtr0339401', 'FBtr0345706'] 2021-10-25 09:34:27.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261873: ['FBtr0340141', 'FBtr0340142', 'FBtr0089978', 'FBtr0100376', 'FBtr0111034', 'FBtr0089975', 'FBtr0100375', 'FBtr0089974', 'FBtr0308217', 'FBtr0308218', 'FBtr0308219', 'FBtr0308220', 'FBtr0333720', 'FBtr0333721'] 2021-10-25 09:34:27.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036910: ['FBtr0074925'] 2021-10-25 09:34:27.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036910 has a single transcript. 2021-10-25 09:34:27.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036911: ['FBtr0089595', 'FBtr0089596', 'FBtr0310477', 'FBtr0332727', 'FBtr0332728'] 2021-10-25 09:34:27.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2579515, 2579576), (2579940, 2579995), (2580113, 2580173)] 2021-10-25 09:34:27.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033235: ['FBtr0088882'] 2021-10-25 09:34:27.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033235 has a single transcript. 2021-10-25 09:34:27.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033236: ['FBtr0088880', 'FBtr0305127', 'FBtr0339128'] 2021-10-25 09:34:27.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029105: ['FBtr0072148', 'FBtr0330254'] 2021-10-25 09:34:27.270 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084684': ['FBtr0330287']} 2021-10-25 09:34:27.270 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330287']] 2021-10-25 09:34:27.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040382: ['FBtr0070135', 'FBtr0070136', 'FBtr0070137'] 2021-10-25 09:34:27.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23958219, 23958331), (23958512, 23958572), (23960080, 23960138), (23960459, 23960512), (23960719, 23961219)] 2021-10-25 09:34:27.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.301 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072148': ['FBtr0330254']} 2021-10-25 09:34:27.301 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330254']] 2021-10-25 09:34:27.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029113: ['FBtr0076734'] 2021-10-25 09:34:27.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029113 has a single transcript. 2021-10-25 09:34:27.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7942888, 7947604), (7948520, 7953901), (7952041, 7953901), (7954311, 7954377), (7954311, 7955312)] 2021-10-25 09:34:27.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029114: ['FBtr0075607'] 2021-10-25 09:34:27.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029114 has a single transcript. 2021-10-25 09:34:27.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085202: ['FBtr0112364'] 2021-10-25 09:34:27.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085202 has a single transcript. 2021-10-25 09:34:27.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029117: ['FBtr0076897'] 2021-10-25 09:34:27.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029117 has a single transcript. 2021-10-25 09:34:27.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085203: ['FBtr0112365'] 2021-10-25 09:34:27.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085203 has a single transcript. 2021-10-25 09:34:27.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029118: ['FBtr0077134', 'FBtr0344756'] 2021-10-25 09:34:27.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19816281, 19816345), (19816531, 19816592), (19816661, 19816719), (19816674, 19816719), (19816820, 19816870), (19817003, 19817059), (19817167, 19817230), (19817549, 19817616), (19817695, 19817749)] 2021-10-25 09:34:27.338 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19817616, 19817790, 'FBtr0089595_exon_1') contains intron (19817695, 19817749) 2021-10-25 09:34:27.338 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19817230, 19817790, 'FBtr0089596_exon_1') contains intron (19817549, 19817616) 2021-10-25 09:34:27.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089595_exon_1', 'FBtr0089596_exon_1'] 2021-10-25 09:34:27.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085204: ['FBtr0112366'] 2021-10-25 09:34:27.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085204 has a single transcript. 2021-10-25 09:34:27.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085205: ['FBtr0112367'] 2021-10-25 09:34:27.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085205 has a single transcript. 2021-10-25 09:34:27.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(759685, 759775), (759685, 759754), (760528, 760681)] 2021-10-25 09:34:27.358 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (759593, 760528, 'FBtr0070137_exon_1') contains intron (759685, 759775) 2021-10-25 09:34:27.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070137_exon_1'] 2021-10-25 09:34:27.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085206: ['FBtr0112368'] 2021-10-25 09:34:27.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085206 has a single transcript. 2021-10-25 09:34:27.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085207: ['FBtr0112369', 'FBtr0112370', 'FBtr0112371'] 2021-10-25 09:34:27.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5562871, 5563084), (5563184, 5563265), (5563395, 5563492)] 2021-10-25 09:34:27.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033238: ['FBtr0088853'] 2021-10-25 09:34:27.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033238 has a single transcript. 2021-10-25 09:34:27.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033240: ['FBtr0305126', 'FBtr0113052'] 2021-10-25 09:34:27.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029121: ['FBtr0077083'] 2021-10-25 09:34:27.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029121 has a single transcript. 2021-10-25 09:34:27.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4434056, 4434114), (4434238, 4434297), (4434569, 4434620), (4434753, 4434853)] 2021-10-25 09:34:27.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029123: ['FBtr0079733', 'FBtr0330210'] 2021-10-25 09:34:27.449 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4433907, 4434238, 'FBtr0112370_exon_1') contains intron (4434056, 4434114) 2021-10-25 09:34:27.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112370_exon_1'] 2021-10-25 09:34:27.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040383: ['FBtr0070134', 'FBtr0343759'] 2021-10-25 09:34:27.472 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7956289, 7956635), (7956836, 7956897), (7956840, 7956897), (7957715, 7957768), (7957959, 7958017)] 2021-10-25 09:34:27.473 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.473 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:27.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.499 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079733': ['FBtr0330210']} 2021-10-25 09:34:27.499 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330210']] 2021-10-25 09:34:27.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029131: ['FBtr0086108'] 2021-10-25 09:34:27.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029131 has a single transcript. 2021-10-25 09:34:27.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(750731, 750793), (750855, 757804), (756506, 757804)] 2021-10-25 09:34:27.508 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029133: ['FBtr0073730', 'FBtr0310646'] 2021-10-25 09:34:27.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033241: ['FBtr0088878', 'FBtr0088879'] 2021-10-25 09:34:27.537 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8178879, 8179452), (8178976, 8179452), (8179580, 8181044), (8181517, 8191811), (8191994, 8192103), (8192161, 8204172), (8193506, 8210402), (8193506, 8204172), (8204303, 8208796), (8204303, 8210402), (8210038, 8210402), (8210680, 8223627), (8216334, 8216902), (8216415, 8216902), (8217074, 8223627), (8223866, 8223955), (8224047, 8224784), (8224047, 8227870), (8224047, 8225078), (8225726, 8227870), (8226083, 8227870), (8228098, 8235588), (8230718, 8232428), (8230766, 8232428), (8232906, 8235588), (8235820, 8235881), (8237169, 8237231), (8237428, 8237593), (8237428, 8237809), (8237650, 8237809), (8237941, 8238006), (8238188, 8238251)] 2021-10-25 09:34:27.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8178548, 8179580, 'FBtr0340141_exon_1') contains intron (8178879, 8179452) 2021-10-25 09:34:27.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8178548, 8179580, 'FBtr0340142_exon_1') contains intron (8178879, 8179452) 2021-10-25 09:34:27.539 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8178548, 8179580, 'FBtr0100376_exon_1') contains intron (8178879, 8179452) 2021-10-25 09:34:27.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036913: ['FBtr0332148', 'FBtr0332149', 'FBtr0332150', 'FBtr0332151'] 2021-10-25 09:34:27.541 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8178548, 8179580, 'FBtr0333720_exon_1') contains intron (8178879, 8179452) 2021-10-25 09:34:27.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340141_exon_1', 'FBtr0340142_exon_1', 'FBtr0100376_exon_1', 'FBtr0333720_exon_1'] 2021-10-25 09:34:27.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085208: ['FBtr0112372', 'FBtr0299809', 'FBtr0344625'] 2021-10-25 09:34:27.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13212392, 13212463), (13212392, 13212449), (13212958, 13213155)] 2021-10-25 09:34:27.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040384: ['FBtr0070491', 'FBtr0070492', 'FBtr0070493', 'FBtr0309881', 'FBtr0345318'] 2021-10-25 09:34:27.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7959282, 7959341), (7959836, 7959975)] 2021-10-25 09:34:27.585 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7959341, 7960015, 'FBtr0088878_exon_1') contains intron (7959836, 7959975) 2021-10-25 09:34:27.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088878_exon_1'] 2021-10-25 09:34:27.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6047780, 6048133)] 2021-10-25 09:34:27.620 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6046650, 6048706, 'FBtr0299809_exon_1') contains intron (6047780, 6048133) 2021-10-25 09:34:27.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299809_exon_1'] 2021-10-25 09:34:27.621 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029134: ['FBtr0088224', 'FBtr0088225'] 2021-10-25 09:34:27.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19871454, 19873760), (19873995, 19874062), (19874339, 19874540), (19874769, 19874832), (19875692, 19875758), (19876890, 19876963), (19877266, 19877322), (19877573, 19878832), (19877630, 19878832), (19879479, 19879544), (19879479, 19879535), (19879702, 19879766), (19879954, 19880010), (19880196, 19880257), (19880725, 19880788)] 2021-10-25 09:34:27.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033243: ['FBtr0088875', 'FBtr0339126', 'FBtr0339127'] 2021-10-25 09:34:27.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10819998, 10820061), (10820219, 10820281)] 2021-10-25 09:34:27.673 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10819977, 10820219, 'FBtr0088225_exon_1') contains intron (10819998, 10820061) 2021-10-25 09:34:27.673 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088225_exon_1'] 2021-10-25 09:34:27.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2783425, 2783766), (2784146, 2784269), (2784487, 2784547), (2784687, 2784999), (2785129, 2788493), (2788612, 2789237), (2789378, 2789745), (2789378, 2790058), (2789439, 2789745), (2789439, 2789708), (2790157, 2790244)] 2021-10-25 09:34:27.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7966313, 7966803), (7966740, 7966803), (7967004, 7967058), (7967258, 7967318), (7967399, 7967885)] 2021-10-25 09:34:27.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085209: ['FBtr0300048'] 2021-10-25 09:34:27.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085209 has a single transcript. 2021-10-25 09:34:27.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085210: ['FBtr0112374'] 2021-10-25 09:34:27.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085210 has a single transcript. 2021-10-25 09:34:27.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029137: ['FBtr0080362'] 2021-10-25 09:34:27.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029137 has a single transcript. 2021-10-25 09:34:27.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085211: ['FBtr0112375'] 2021-10-25 09:34:27.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085211 has a single transcript. 2021-10-25 09:34:27.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029147: ['FBtr0071762', 'FBtr0308350'] 2021-10-25 09:34:27.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085212: ['FBtr0112376'] 2021-10-25 09:34:27.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085212 has a single transcript. 2021-10-25 09:34:27.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085213: ['FBtr0112377'] 2021-10-25 09:34:27.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085213 has a single transcript. 2021-10-25 09:34:27.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085214: ['FBtr0112378'] 2021-10-25 09:34:27.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085214 has a single transcript. 2021-10-25 09:34:27.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085217: ['FBtr0112381'] 2021-10-25 09:34:27.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085217 has a single transcript. 2021-10-25 09:34:27.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036915: ['FBtr0074891', 'FBtr0074892'] 2021-10-25 09:34:27.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085218: ['FBtr0112382'] 2021-10-25 09:34:27.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085218 has a single transcript. 2021-10-25 09:34:27.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22128176, 22128281), (22128413, 22128472), (22128625, 22128714), (22128625, 22128693), (22128881, 22128953), (22129485, 22129550), (22129691, 22129763), (22129930, 22129990)] 2021-10-25 09:34:27.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085219: ['FBtr0112383'] 2021-10-25 09:34:27.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085219 has a single transcript. 2021-10-25 09:34:27.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033244: ['FBtr0088873', 'FBtr0088874', 'FBtr0301231'] 2021-10-25 09:34:27.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085220: ['FBtr0340071', 'FBtr0112384'] 2021-10-25 09:34:27.823 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19910432, 19910501), (19911519, 19911573)] 2021-10-25 09:34:27.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19910302, 19911519, 'FBtr0074891_exon_1') contains intron (19910432, 19910501) 2021-10-25 09:34:27.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074891_exon_1'] 2021-10-25 09:34:27.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029148: ['FBtr0075698', 'FBtr0333076'] 2021-10-25 09:34:27.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16952053, 16952151)] 2021-10-25 09:34:27.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7969476, 7969573), (7969769, 7969868), (7970176, 7970234), (7970474, 7970531), (7970713, 7970773), (7971182, 7971243), (7971529, 7971636), (7971564, 7971636)] 2021-10-25 09:34:27.875 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7969573, 7970176, 'FBtr0301231_exon_6') contains intron (7969769, 7969868) 2021-10-25 09:34:27.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301231_exon_6'] 2021-10-25 09:34:27.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040385: ['FBtr0070462'] 2021-10-25 09:34:27.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040385 has a single transcript. 2021-10-25 09:34:27.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036916: ['FBtr0074918'] 2021-10-25 09:34:27.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036916 has a single transcript. 2021-10-25 09:34:27.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14801779, 14801839)] 2021-10-25 09:34:27.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036918: ['FBtr0074894', 'FBtr0330181'] 2021-10-25 09:34:27.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040388: ['FBtr0070457', 'FBtr0070458', 'FBtr0303886', 'FBtr0303887', 'FBtr0334883'] 2021-10-25 09:34:27.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085222: ['FBtr0112386', 'FBtr0345622'] 2021-10-25 09:34:27.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19923894, 19923981), (19924207, 19924291)] 2021-10-25 09:34:27.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029152: ['FBtr0078383', 'FBtr0078384', 'FBtr0305331'] 2021-10-25 09:34:27.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17510078, 17510145)] 2021-10-25 09:34:27.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:27.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:27.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036919: ['FBtr0074895'] 2021-10-25 09:34:27.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036919 has a single transcript. 2021-10-25 09:34:28.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033246: ['FBtr0088871', 'FBtr0088872', 'FBtr0113053', 'FBtr0339123', 'FBtr0339124', 'FBtr0339125'] 2021-10-25 09:34:28.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036920: ['FBtr0074915'] 2021-10-25 09:34:28.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036920 has a single transcript. 2021-10-25 09:34:28.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036921: ['FBtr0074896', 'FBtr0331800'] 2021-10-25 09:34:28.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085223: ['FBtr0112387', 'FBtr0340218'] 2021-10-25 09:34:28.008 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21531573, 21531757), (21532031, 21532338), (21533178, 21533566), (21533186, 21533566), (21533186, 21533640)] 2021-10-25 09:34:28.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2445593, 2446410), (2445593, 2445860), (2446181, 2446410), (2446577, 2446641), (2446824, 2446889), (2447597, 2450669), (2447597, 2447656), (2450838, 2450902), (2452147, 2456590), (2456686, 2469336), (2469411, 2469797), (2469411, 2469890), (2469411, 2469604)] 2021-10-25 09:34:28.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.132 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19928810, 19930814), (19928908, 19930814), (19931014, 19931087), (19931197, 19931262), (19931377, 19931981)] 2021-10-25 09:34:28.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17544620, 17544821)] 2021-10-25 09:34:28.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085224: ['FBtr0112388'] 2021-10-25 09:34:28.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085224 has a single transcript. 2021-10-25 09:34:28.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029153: ['FBtr0100601', 'FBtr0301867', 'FBtr0301868'] 2021-10-25 09:34:28.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036922: ['FBtr0074913', 'FBtr0346534', 'FBtr0331801', 'FBtr0331802'] 2021-10-25 09:34:28.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085225: ['FBtr0112389'] 2021-10-25 09:34:28.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085225 has a single transcript. 2021-10-25 09:34:28.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085227: ['FBtr0112391'] 2021-10-25 09:34:28.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085227 has a single transcript. 2021-10-25 09:34:28.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085228: ['FBtr0112392'] 2021-10-25 09:34:28.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085228 has a single transcript. 2021-10-25 09:34:28.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085229: ['FBtr0112393'] 2021-10-25 09:34:28.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085229 has a single transcript. 2021-10-25 09:34:28.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085230: ['FBtr0112394'] 2021-10-25 09:34:28.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085230 has a single transcript. 2021-10-25 09:34:28.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085231: ['FBtr0112395'] 2021-10-25 09:34:28.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085231 has a single transcript. 2021-10-25 09:34:28.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085232: ['FBtr0112396'] 2021-10-25 09:34:28.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085232 has a single transcript. 2021-10-25 09:34:28.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7974621, 7974689), (7974824, 7974885), (7975233, 7975303), (7976173, 7976294), (7976723, 7976785), (7976956, 7977021), (7977324, 7977388), (7981122, 7981183), (7981472, 7982640), (7983007, 7984880), (7983007, 7983475), (7985002, 7985065), (7985451, 7991709), (7985451, 7986948), (7985451, 7985601), (7985451, 7989515), (7985451, 7987065), (7985778, 7987065)] 2021-10-25 09:34:28.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003430: ['FBtr0077499'] 2021-10-25 09:34:28.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003430 has a single transcript. 2021-10-25 09:34:28.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085233: ['FBtr0112397', 'FBtr0344886'] 2021-10-25 09:34:28.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261881: ['FBtr0080728'] 2021-10-25 09:34:28.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261881 has a single transcript. 2021-10-25 09:34:28.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16415244, 16415327), (16415622, 16415689), (16416886, 16416949), (16416886, 16416945), (16417350, 16417409), (16417704, 16417764), (16418964, 16419018)] 2021-10-25 09:34:28.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261885: ['FBtr0301487', 'FBtr0089582', 'FBtr0089583', 'FBtr0089581', 'FBtr0335024', 'FBtr0335025'] 2021-10-25 09:34:28.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19979588, 19979656), (19979588, 19979702)] 2021-10-25 09:34:28.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003435: ['FBtr0086492', 'FBtr0086495', 'FBtr0100232', 'FBtr0110898', 'FBtr0301609', 'FBtr0301610', 'FBtr0304654', 'FBtr0304653', 'FBtr0304655', 'FBtr0304656', 'FBtr0310331', 'FBtr0308785', 'FBtr0308786', 'FBtr0308790', 'FBtr0308791', 'FBtr0308792', 'FBtr0308793', 'FBtr0308795', 'FBtr0308796', 'FBtr0308797', 'FBtr0332857'] 2021-10-25 09:34:28.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040389: ['FBtr0070405', 'FBtr0333730'] 2021-10-25 09:34:28.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21796665, 21796733), (21796665, 21796726)] 2021-10-25 09:34:28.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.386 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2344559, 2344615)] 2021-10-25 09:34:28.386 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2343996, 2344649, 'FBtr0070405_exon_1') contains intron (2344559, 2344615) 2021-10-25 09:34:28.387 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070405_exon_1'] 2021-10-25 09:34:28.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085234: ['FBtr0112398'] 2021-10-25 09:34:28.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085234 has a single transcript. 2021-10-25 09:34:28.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029154: ['FBtr0301869'] 2021-10-25 09:34:28.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029154 has a single transcript. 2021-10-25 09:34:28.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085235: ['FBtr0112399'] 2021-10-25 09:34:28.442 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085235 has a single transcript. 2021-10-25 09:34:28.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029155: ['FBtr0085110', 'FBtr0301707', 'FBtr0301708'] 2021-10-25 09:34:28.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085236: ['FBtr0112400'] 2021-10-25 09:34:28.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085236 has a single transcript. 2021-10-25 09:34:28.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085237: ['FBtr0112401'] 2021-10-25 09:34:28.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085237 has a single transcript. 2021-10-25 09:34:28.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040391: ['FBtr0070399'] 2021-10-25 09:34:28.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085239: ['FBtr0112403'] 2021-10-25 09:34:28.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040391 has a single transcript. 2021-10-25 09:34:28.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085239 has a single transcript. 2021-10-25 09:34:28.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085240: ['FBtr0112404'] 2021-10-25 09:34:28.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085240 has a single transcript. 2021-10-25 09:34:28.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040392: ['FBtr0070407', 'FBtr0308937'] 2021-10-25 09:34:28.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085241: ['FBtr0302826', 'FBtr0112405'] 2021-10-25 09:34:28.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27151906, 27154215), (27154390, 27154455), (27155505, 27155565), (27155718, 27155777), (27156072, 27156140), (27156269, 27156339), (27156305, 27157143)] 2021-10-25 09:34:28.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17693455, 17693523), (17693605, 17693714), (17693913, 17694135), (17694295, 17694833), (17694295, 17695922), (17695313, 17695922), (17696111, 17696369), (17696150, 17696369), (17696586, 17697655), (17696586, 17697664), (17697913, 17697980), (17697916, 17697980), (17698162, 17698229), (17698964, 17699094), (17699487, 17699546), (17699703, 17707770), (17707989, 17708053), (17708347, 17715851), (17716934, 17718246), (17716934, 17717955)] 2021-10-25 09:34:28.530 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27156140, 27156461, 'FBtr0301707_exon_6') contains intron (27156269, 27156339) 2021-10-25 09:34:28.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301707_exon_6'] 2021-10-25 09:34:28.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2325305, 2325390)] 2021-10-25 09:34:28.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6050219, 6050274)] 2021-10-25 09:34:28.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036923: ['FBtr0303781'] 2021-10-25 09:34:28.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036923 has a single transcript. 2021-10-25 09:34:28.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036924: ['FBtr0074912'] 2021-10-25 09:34:28.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036924 has a single transcript. 2021-10-25 09:34:28.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036925: ['FBtr0074899'] 2021-10-25 09:34:28.590 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036925 has a single transcript. 2021-10-25 09:34:28.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036926: ['FBtr0074900', 'FBtr0074901', 'FBtr0344084'] 2021-10-25 09:34:28.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085242: ['FBtr0112406'] 2021-10-25 09:34:28.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085242 has a single transcript. 2021-10-25 09:34:28.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033247: ['FBtr0088860', 'FBtr0088861', 'FBtr0088862'] 2021-10-25 09:34:28.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040393: ['FBtr0070541'] 2021-10-25 09:34:28.650 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040393 has a single transcript. 2021-10-25 09:34:28.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085243: ['FBtr0112407'] 2021-10-25 09:34:28.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085243 has a single transcript. 2021-10-25 09:34:28.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085244: ['FBtr0112408'] 2021-10-25 09:34:28.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085244 has a single transcript. 2021-10-25 09:34:28.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040394: ['FBtr0070434'] 2021-10-25 09:34:28.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040394 has a single transcript. 2021-10-25 09:34:28.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085245: ['FBtr0339118'] 2021-10-25 09:34:28.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085245 has a single transcript. 2021-10-25 09:34:28.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029157: ['FBtr0084799', 'FBtr0084800', 'FBtr0301612', 'FBtr0301613'] 2021-10-25 09:34:28.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040395: ['FBtr0070376', 'FBtr0070377', 'FBtr0333754', 'FBtr0333755'] 2021-10-25 09:34:28.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19992042, 19993264), (19993322, 19995373), (19993322, 19994167), (19994735, 19994807), (19994951, 19995373), (19995502, 19995628)] 2021-10-25 09:34:28.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085246: ['FBtr0112410'] 2021-10-25 09:34:28.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085246 has a single transcript. 2021-10-25 09:34:28.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085248: ['FBtr0112412', 'FBtr0339309'] 2021-10-25 09:34:28.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7988509, 7989831), (7988627, 7989831), (7990063, 7990124), (7990562, 7990658), (7990867, 7990927)] 2021-10-25 09:34:28.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8918532, 8918591)] 2021-10-25 09:34:28.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24939804, 24939872), (24941781, 24941866), (24942136, 24942202), (24942397, 24942460), (24942526, 24942818), (24943210, 24943275), (24943521, 24944417), (24943521, 24943589)] 2021-10-25 09:34:28.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2080634, 2080744), (2081659, 2090968), (2089606, 2090968), (2091450, 2091517), (2091733, 2091801), (2091891, 2091961)] 2021-10-25 09:34:28.756 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24938709, 24941781, 'FBtr0084799_exon_7') contains intron (24939804, 24939872) 2021-10-25 09:34:28.756 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2080609, 2081659, 'FBtr0070376_exon_1') contains intron (2080634, 2080744) 2021-10-25 09:34:28.756 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24939002, 24941781, 'FBtr0084800_exon_7') contains intron (24939804, 24939872) 2021-10-25 09:34:28.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2080609, 2081659, 'FBtr0333754_exon_1') contains intron (2080634, 2080744) 2021-10-25 09:34:28.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070376_exon_1', 'FBtr0333754_exon_1'] 2021-10-25 09:34:28.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084799_exon_7', 'FBtr0084800_exon_7'] 2021-10-25 09:34:28.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036927: ['FBtr0074908', 'FBtr0074909', 'FBtr0302049', 'FBtr0344085'] 2021-10-25 09:34:28.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085249: ['FBtr0112413'] 2021-10-25 09:34:28.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085249 has a single transcript. 2021-10-25 09:34:28.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261924: ['FBtr0342854'] 2021-10-25 09:34:28.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261924 has a single transcript. 2021-10-25 09:34:28.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085250: ['FBtr0299834', 'FBtr0345476'] 2021-10-25 09:34:28.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261925: ['FBtr0344601', 'FBtr0303589'] 2021-10-25 09:34:28.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033248: ['FBtr0088870', 'FBtr0339283'] 2021-10-25 09:34:28.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10198080, 10198372), (10198446, 10199565)] 2021-10-25 09:34:28.842 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.850 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15865250, 15865315)] 2021-10-25 09:34:28.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19999183, 19999287), (19999450, 19999571), (19999743, 19999935), (20000060, 20000120), (20000234, 20000442), (20000402, 20000587), (20000473, 20000638)] 2021-10-25 09:34:28.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7994344, 7994518), (7994344, 7994514)] 2021-10-25 09:34:28.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040396: ['FBtr0070508', 'FBtr0343600'] 2021-10-25 09:34:28.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085252: ['FBtr0112416'] 2021-10-25 09:34:28.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085252 has a single transcript. 2021-10-25 09:34:28.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029158: ['FBtr0290266'] 2021-10-25 09:34:28.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029158 has a single transcript. 2021-10-25 09:34:28.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085253: ['FBtr0112417'] 2021-10-25 09:34:28.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085253 has a single transcript. 2021-10-25 09:34:28.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19530700, 19532169), (19530700, 19532175), (19532374, 19532435), (19532711, 19537775), (19537868, 19538029), (19538211, 19567058), (19538211, 19564440), (19538211, 19564461), (19538211, 19566148), (19538211, 19546448), (19538211, 19546011), (19538211, 19573987), (19538211, 19574002), (19538391, 19573987), (19538391, 19574002), (19538391, 19564461), (19538391, 19546448), (19546059, 19573987), (19546059, 19574002), (19546059, 19564440), (19546059, 19564461), (19546059, 19546448), (19564512, 19566148), (19564512, 19573987), (19564512, 19574002), (19567160, 19574002), (19574066, 19574143), (19574326, 19628480), (19574326, 19600881), (19601004, 19628480), (19601019, 19628480), (19629070, 19631036), (19629070, 19630483), (19629070, 19630852), (19629070, 19630202)] 2021-10-25 09:34:28.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261927: ['FBtr0344580'] 2021-10-25 09:34:28.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261927 has a single transcript. 2021-10-25 09:34:28.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029161: ['FBtr0079217', 'FBtr0079218', 'FBtr0112945', 'FBtr0299810', 'FBtr0343130'] 2021-10-25 09:34:28.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085254: ['FBtr0112418'] 2021-10-25 09:34:28.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085254 has a single transcript. 2021-10-25 09:34:28.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085256: ['FBtr0112420'] 2021-10-25 09:34:28.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085256 has a single transcript. 2021-10-25 09:34:28.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085257: ['FBtr0112421'] 2021-10-25 09:34:28.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085257 has a single transcript. 2021-10-25 09:34:28.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3175658, 3175933)] 2021-10-25 09:34:28.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033249: ['FBtr0088868', 'FBtr0339282'] 2021-10-25 09:34:28.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261928: ['FBtr0345169', 'FBtr0345170', 'FBtr0345171', 'FBtr0303601', 'FBtr0303602', 'FBtr0332437'] 2021-10-25 09:34:28.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085259: ['FBtr0112423'] 2021-10-25 09:34:28.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085259 has a single transcript. 2021-10-25 09:34:28.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085260: ['FBtr0344887'] 2021-10-25 09:34:28.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085260 has a single transcript. 2021-10-25 09:34:28.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085261: ['FBtr0112425', 'FBtr0112426', 'FBtr0345491'] 2021-10-25 09:34:28.975 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8001750, 8001922)] 2021-10-25 09:34:28.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:28.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:28.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040397: ['FBtr0070181', 'FBtr0113327', 'FBtr0331339', 'FBtr0331340'] 2021-10-25 09:34:29.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036928: ['FBtr0074903', 'FBtr0332719'] 2021-10-25 09:34:29.015 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6047780, 6048133), (6047780, 6047899)] 2021-10-25 09:34:29.016 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6046653, 6047934, 'FBtr0079217_exon_1') contains intron (6047780, 6047899) 2021-10-25 09:34:29.016 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6046650, 6048706, 'FBtr0299810_exon_1') contains intron (6047780, 6048133) 2021-10-25 09:34:29.016 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6046515, 6047934, 'FBtr0343130_exon_1') contains intron (6047780, 6047899) 2021-10-25 09:34:29.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079217_exon_1', 'FBtr0299810_exon_1', 'FBtr0343130_exon_1'] 2021-10-25 09:34:29.016 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12165493, 12165622)] 2021-10-25 09:34:29.025 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12164908, 12165739, 'FBtr0112426_exon_1') contains intron (12165493, 12165622) 2021-10-25 09:34:29.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112426_exon_1'] 2021-10-25 09:34:29.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033250: ['FBtr0088867', 'FBtr0304750'] 2021-10-25 09:34:29.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20000672, 20000990), (20001296, 20001360), (20001436, 20001849)] 2021-10-25 09:34:29.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1076300, 1076432), (1077097, 1077209), (1077512, 1088671), (1077512, 1081036), (1077512, 1102346), (1088765, 1102346), (1102401, 1134184), (1102401, 1119684), (1119785, 1134184)] 2021-10-25 09:34:29.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8010545, 8010770), (8010545, 8010913), (8011092, 8011171), (8011311, 8011400), (8011581, 8011642), (8011795, 8011865), (8012002, 8012059), (8012282, 8012346), (8012880, 8013071)] 2021-10-25 09:34:29.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10225758, 10225812), (10226153, 10239617), (10226619, 10228704), (10229234, 10239476), (10239497, 10239617), (10239958, 10240187), (10240313, 10240375), (10240495, 10240552), (10240944, 10241539), (10241740, 10241796), (10248274, 10248346), (10248274, 10248343), (10248430, 10248489), (10248969, 10250927)] 2021-10-25 09:34:29.092 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10241796, 10248430, 'FBtr0345170_exon_8') contains intron (10248274, 10248346) 2021-10-25 09:34:29.092 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10241796, 10248430, 'FBtr0345171_exon_8') contains intron (10248274, 10248346) 2021-10-25 09:34:29.093 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0070181': ['FBtr0331339']} 2021-10-25 09:34:29.093 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331339']] 2021-10-25 09:34:29.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345170_exon_8', 'FBtr0345171_exon_8'] 2021-10-25 09:34:29.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036929: ['FBtr0074904', 'FBtr0332720'] 2021-10-25 09:34:29.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085263: ['FBtr0112428'] 2021-10-25 09:34:29.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085263 has a single transcript. 2021-10-25 09:34:29.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085264: ['FBtr0300636'] 2021-10-25 09:34:29.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085264 has a single transcript. 2021-10-25 09:34:29.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085265: ['FBtr0301011', 'FBtr0345938'] 2021-10-25 09:34:29.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20002992, 20003302), (20004363, 20004416)] 2021-10-25 09:34:29.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033252: ['FBtr0088827', 'FBtr0088828', 'FBtr0339281'] 2021-10-25 09:34:29.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040398: ['FBtr0070179'] 2021-10-25 09:34:29.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040398 has a single transcript. 2021-10-25 09:34:29.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029167: ['FBtr0075753', 'FBtr0333020'] 2021-10-25 09:34:29.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13604796, 13604863), (13604989, 13605062), (13605191, 13605267)] 2021-10-25 09:34:29.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040465: ['FBtr0086734'] 2021-10-25 09:34:29.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040465 has a single transcript. 2021-10-25 09:34:29.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036931: ['FBtr0074907'] 2021-10-25 09:34:29.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036931 has a single transcript. 2021-10-25 09:34:29.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036932: ['FBtr0074872', 'FBtr0302366'] 2021-10-25 09:34:29.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040466: ['FBtr0078893'] 2021-10-25 09:34:29.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040466 has a single transcript. 2021-10-25 09:34:29.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8054842, 8054904), (8055033, 8055731), (8056061, 8056161), (8056094, 8056161), (8057331, 8065239)] 2021-10-25 09:34:29.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040467: ['FBtr0071302', 'FBtr0333472'] 2021-10-25 09:34:29.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285947: ['FBtr0074731', 'FBtr0074732', 'FBtr0308192', 'FBtr0344339'] 2021-10-25 09:34:29.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13846314, 13846845), (13846941, 13847021), (13847186, 13847250), (13847186, 13847247), (13847640, 13847697), (13847825, 13847881), (13847977, 13848080), (13848278, 13848390), (13848554, 13848610), (13848768, 13848829), (13848984, 13849049), (13849652, 13849794), (13850913, 13850995), (13851889, 13851941), (13852490, 13852566), (13853889, 13853953), (13854032, 13854093), (13854343, 13854396), (13855144, 13855204), (13855690, 13855750), (13856257, 13856321), (13856805, 13856869), (13858647, 13858705), (13858918, 13858979), (13859435, 13859491), (13859748, 13859805)] 2021-10-25 09:34:29.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20028059, 20028114), (20028185, 20028244), (20028378, 20028645), (20028809, 20028871)] 2021-10-25 09:34:29.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085267: ['FBtr0112432'] 2021-10-25 09:34:29.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085267 has a single transcript. 2021-10-25 09:34:29.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085271: ['FBtr0112436', 'FBtr0300028'] 2021-10-25 09:34:29.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9159076, 9159136), (9159076, 9159139)] 2021-10-25 09:34:29.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12534004, 12534062)] 2021-10-25 09:34:29.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036934: ['FBtr0074871', 'FBtr0332667'] 2021-10-25 09:34:29.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261929: ['FBtr0330144', 'FBtr0303603', 'FBtr0339322'] 2021-10-25 09:34:29.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033257: ['FBtr0088780'] 2021-10-25 09:34:29.338 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033257 has a single transcript. 2021-10-25 09:34:29.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033258: ['FBtr0088822', 'FBtr0088823'] 2021-10-25 09:34:29.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040475: ['FBtr0076413'] 2021-10-25 09:34:29.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040475 has a single transcript. 2021-10-25 09:34:29.356 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19598073, 19598148), (19598077, 19598148), (19598205, 19598432)] 2021-10-25 09:34:29.357 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19598039, 19598205, 'FBtr0308192_exon_1') contains intron (19598073, 19598148) 2021-10-25 09:34:29.357 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308192_exon_1'] 2021-10-25 09:34:29.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040477: ['FBtr0087667'] 2021-10-25 09:34:29.361 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040477 has a single transcript. 2021-10-25 09:34:29.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20060721, 20074106), (20076131, 20088497), (20076131, 20088869)] 2021-10-25 09:34:29.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040487: ['FBtr0075673'] 2021-10-25 09:34:29.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040487 has a single transcript. 2021-10-25 09:34:29.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085273: ['FBtr0112438', 'FBtr0333033'] 2021-10-25 09:34:29.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040491: ['FBtr0088077'] 2021-10-25 09:34:29.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040491 has a single transcript. 2021-10-25 09:34:29.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040493: ['FBtr0082730', 'FBtr0344095'] 2021-10-25 09:34:29.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8098355, 8098414)] 2021-10-25 09:34:29.397 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8096791, 8098484, 'FBtr0088823_exon_1') contains intron (8098355, 8098414) 2021-10-25 09:34:29.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088823_exon_1'] 2021-10-25 09:34:29.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8578506, 8591146), (8591896, 8619785), (8620018, 8620303), (8620532, 8622274), (8622413, 8622482), (8622857, 8625691)] 2021-10-25 09:34:29.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14235551, 14235611)] 2021-10-25 09:34:29.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.419 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330144': ['FBtr0303603']} 2021-10-25 09:34:29.419 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0303603']] 2021-10-25 09:34:29.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036935: ['FBtr0074870'] 2021-10-25 09:34:29.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036935 has a single transcript. 2021-10-25 09:34:29.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12950327, 12950407), (12950518, 12956941), (12957118, 12959071), (12959228, 12959292), (12960317, 12961442), (12960317, 12967159), (12967378, 12967453)] 2021-10-25 09:34:29.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036936: ['FBtr0074818'] 2021-10-25 09:34:29.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036936 has a single transcript. 2021-10-25 09:34:29.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036937: ['FBtr0074869'] 2021-10-25 09:34:29.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036937 has a single transcript. 2021-10-25 09:34:29.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029170: ['FBtr0085101'] 2021-10-25 09:34:29.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029170 has a single transcript. 2021-10-25 09:34:29.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036938: ['FBtr0074868', 'FBtr0332701'] 2021-10-25 09:34:29.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033259: ['FBtr0088781'] 2021-10-25 09:34:29.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033259 has a single transcript. 2021-10-25 09:34:29.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029172: ['FBtr0076196'] 2021-10-25 09:34:29.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029172 has a single transcript. 2021-10-25 09:34:29.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033260: ['FBtr0088821', 'FBtr0301355'] 2021-10-25 09:34:29.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029174: ['FBtr0079872', 'FBtr0342837'] 2021-10-25 09:34:29.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085274: ['FBtr0302580'] 2021-10-25 09:34:29.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085274 has a single transcript. 2021-10-25 09:34:29.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261930: ['FBtr0070110', 'FBtr0110929'] 2021-10-25 09:34:29.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085276: ['FBtr0112441'] 2021-10-25 09:34:29.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085276 has a single transcript. 2021-10-25 09:34:29.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085277: ['FBtr0112442', 'FBtr0302929'] 2021-10-25 09:34:29.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040496: ['FBtr0080105', 'FBtr0336846', 'FBtr0344848'] 2021-10-25 09:34:29.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8102544, 8102607), (8102906, 8102969), (8103122, 8103182), (8103461, 8103522), (8103912, 8103966), (8104103, 8104161), (8104354, 8104452), (8104639, 8104690), (8105151, 8105212), (8105457, 8105524), (8105939, 8106016)] 2021-10-25 09:34:29.603 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8102259, 8102906, 'FBtr0301355_exon_11') contains intron (8102544, 8102607) 2021-10-25 09:34:29.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9888338, 9888403), (9888546, 9888666), (9888787, 9888846), (9888985, 9889047), (9889405, 9889459), (9889570, 9889631), (9889769, 9889876)] 2021-10-25 09:34:29.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301355_exon_11'] 2021-10-25 09:34:29.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20112616, 20112761), (20112670, 20112761)] 2021-10-25 09:34:29.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285948: ['FBtr0077452', 'FBtr0335136', 'FBtr0345285'] 2021-10-25 09:34:29.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(583077, 593647), (591951, 593647), (594306, 596355)] 2021-10-25 09:34:29.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16270765, 16270847)] 2021-10-25 09:34:29.638 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16270369, 16270902, 'FBtr0112442_exon_1') contains intron (16270765, 16270847) 2021-10-25 09:34:29.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112442_exon_1'] 2021-10-25 09:34:29.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10677464, 10677746), (10678805, 10678903)] 2021-10-25 09:34:29.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033261: ['FBtr0088782', 'FBtr0347555'] 2021-10-25 09:34:29.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029175: ['FBtr0100513'] 2021-10-25 09:34:29.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029175 has a single transcript. 2021-10-25 09:34:29.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036939: ['FBtr0074867', 'FBtr0332700'] 2021-10-25 09:34:29.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029176: ['FBtr0085392', 'FBtr0085393', 'FBtr0302442'] 2021-10-25 09:34:29.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261931: ['FBtr0332963', 'FBtr0303708', 'FBtr0303709', 'FBtr0303710'] 2021-10-25 09:34:29.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4457289, 4457374), (4457509, 4457739), (4458057, 4458288)] 2021-10-25 09:34:29.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085279: ['FBtr0346594', 'FBtr0112444'] 2021-10-25 09:34:29.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20124746, 20124864), (20125662, 20126018), (20126219, 20126283), (20126219, 20127159)] 2021-10-25 09:34:29.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8107045, 8113586)] 2021-10-25 09:34:29.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29220200, 29220269), (29220204, 29220269), (29220308, 29220429), (29220579, 29220642)] 2021-10-25 09:34:29.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17476471, 17476568)] 2021-10-25 09:34:29.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040502: ['FBtr0085988'] 2021-10-25 09:34:29.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040502 has a single transcript. 2021-10-25 09:34:29.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040503: ['FBtr0088135', 'FBtr0331386'] 2021-10-25 09:34:29.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036940: ['FBtr0074866'] 2021-10-25 09:34:29.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036940 has a single transcript. 2021-10-25 09:34:29.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033264: ['FBtr0088783'] 2021-10-25 09:34:29.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033264 has a single transcript. 2021-10-25 09:34:29.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036941: ['FBtr0074865'] 2021-10-25 09:34:29.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036941 has a single transcript. 2021-10-25 09:34:29.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9609691, 9609750), (9609691, 9609759), (9612206, 9612281), (9612448, 9620342), (9616615, 9620342), (9618182, 9620342), (9620531, 9620592)] 2021-10-25 09:34:29.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033265: ['FBtr0100667', 'FBtr0100668', 'FBtr0344881'] 2021-10-25 09:34:29.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036942: ['FBtr0074864'] 2021-10-25 09:34:29.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036942 has a single transcript. 2021-10-25 09:34:29.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285949: ['FBtr0088525', 'FBtr0088526', 'FBtr0088527'] 2021-10-25 09:34:29.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036945: ['FBtr0074820', 'FBtr0074821'] 2021-10-25 09:34:29.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11414624, 11414685)] 2021-10-25 09:34:29.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085280: ['FBtr0112445', 'FBtr0301012'] 2021-10-25 09:34:29.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20188614, 20188675), (20188762, 20188991), (20189188, 20189319)] 2021-10-25 09:34:29.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029501: ['FBtr0072299'] 2021-10-25 09:34:29.836 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029501 has a single transcript. 2021-10-25 09:34:29.836 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20188521, 20188762, 'FBtr0074820_exon_1') contains intron (20188614, 20188675) 2021-10-25 09:34:29.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074820_exon_1'] 2021-10-25 09:34:29.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029502: ['FBtr0070963'] 2021-10-25 09:34:29.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029502 has a single transcript. 2021-10-25 09:34:29.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9587228, 9587446), (9587283, 9587446), (9587338, 9587446), (9587706, 9587776)] 2021-10-25 09:34:29.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.850 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17671677, 17673650), (17672011, 17673650), (17673837, 17677401), (17677574, 17682938)] 2021-10-25 09:34:29.851 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029503: ['FBtr0084554'] 2021-10-25 09:34:29.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029503 has a single transcript. 2021-10-25 09:34:29.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8125209, 8125266), (8125470, 8125532), (8125473, 8125532), (8126869, 8126923), (8127009, 8127064)] 2021-10-25 09:34:29.853 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8125532, 8127009, 'FBtr0100667_exon_2') contains intron (8126869, 8126923) 2021-10-25 09:34:29.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100667_exon_2'] 2021-10-25 09:34:29.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029504: ['FBtr0071079', 'FBtr0112946', 'FBtr0333203', 'FBtr0310287'] 2021-10-25 09:34:29.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040505: ['FBtr0087118', 'FBtr0331926'] 2021-10-25 09:34:29.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036947: ['FBtr0074860'] 2021-10-25 09:34:29.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036947 has a single transcript. 2021-10-25 09:34:29.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085282: ['FBtr0112447'] 2021-10-25 09:34:29.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085282 has a single transcript. 2021-10-25 09:34:29.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036948: ['FBtr0074859'] 2021-10-25 09:34:29.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036948 has a single transcript. 2021-10-25 09:34:29.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085283: ['FBtr0112448'] 2021-10-25 09:34:29.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085283 has a single transcript. 2021-10-25 09:34:29.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036949: ['FBtr0074858', 'FBtr0332696'] 2021-10-25 09:34:29.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16630588, 16630651), (16630859, 16630918), (16631952, 16632018), (16632196, 16632262), (16632450, 16632517), (16633010, 16633080), (16633774, 16633858), (16634903, 16637647), (16634903, 16639745)] 2021-10-25 09:34:29.914 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.914 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085284: ['FBtr0112449'] 2021-10-25 09:34:29.916 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085284 has a single transcript. 2021-10-25 09:34:29.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003444: ['FBtr0078129'] 2021-10-25 09:34:29.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003444 has a single transcript. 2021-10-25 09:34:29.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261932: ['FBtr0332163', 'FBtr0303731'] 2021-10-25 09:34:29.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085285: ['FBtr0302318'] 2021-10-25 09:34:29.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085285 has a single transcript. 2021-10-25 09:34:29.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003447: ['FBtr0071101', 'FBtr0071102', 'FBtr0301677', 'FBtr0301679'] 2021-10-25 09:34:29.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085287: ['FBtr0112452'] 2021-10-25 09:34:29.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085287 has a single transcript. 2021-10-25 09:34:29.940 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7686506, 7686582), (7686798, 7686868), (7686801, 7686868), (7687747, 7687816), (7688329, 7688391), (7689996, 7708994), (7689996, 7704777), (7689996, 7696476), (7689996, 7694785)] 2021-10-25 09:34:29.941 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085288: ['FBtr0300030'] 2021-10-25 09:34:29.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085288 has a single transcript. 2021-10-25 09:34:29.950 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20205926, 20205997)] 2021-10-25 09:34:29.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285950: ['FBtr0072405', 'FBtr0072406'] 2021-10-25 09:34:29.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085289: ['FBtr0333482'] 2021-10-25 09:34:29.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085289 has a single transcript. 2021-10-25 09:34:29.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033266: ['FBtr0088784'] 2021-10-25 09:34:29.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033266 has a single transcript. 2021-10-25 09:34:29.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085290: ['FBtr0112456'] 2021-10-25 09:34:29.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085290 has a single transcript. 2021-10-25 09:34:29.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17406769, 17407048), (17407199, 17407250)] 2021-10-25 09:34:29.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033268: ['FBtr0088816', 'FBtr0339297'] 2021-10-25 09:34:29.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:29.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:29.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085291: ['FBtr0112457'] 2021-10-25 09:34:29.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085291 has a single transcript. 2021-10-25 09:34:29.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040506: ['FBtr0310556'] 2021-10-25 09:34:29.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040506 has a single transcript. 2021-10-25 09:34:29.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085292: ['FBtr0112458'] 2021-10-25 09:34:29.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085292 has a single transcript. 2021-10-25 09:34:29.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040507: ['FBtr0072874', 'FBtr0332662'] 2021-10-25 09:34:29.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085294: ['FBtr0331459'] 2021-10-25 09:34:29.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085294 has a single transcript. 2021-10-25 09:34:30.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085295: ['FBtr0112461'] 2021-10-25 09:34:30.000 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085295 has a single transcript. 2021-10-25 09:34:30.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24969051, 24969117), (24969224, 24969468)] 2021-10-25 09:34:30.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085296: ['FBtr0112462'] 2021-10-25 09:34:30.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085296 has a single transcript. 2021-10-25 09:34:30.008 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8134896, 8134966)] 2021-10-25 09:34:30.009 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.009 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036950: ['FBtr0302721', 'FBtr0332691'] 2021-10-25 09:34:30.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085297: ['FBtr0112463'] 2021-10-25 09:34:30.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085297 has a single transcript. 2021-10-25 09:34:30.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7964172, 7982370), (7969761, 7970018), (7969980, 7982370), (7970371, 7982370), (7982651, 7983987), (7984408, 7984469), (7985039, 7985107), (7985356, 7985433)] 2021-10-25 09:34:30.022 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7969702, 7970371, 'FBtr0071102_exon_1') contains intron (7969761, 7970018) 2021-10-25 09:34:30.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071102_exon_1'] 2021-10-25 09:34:30.023 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085298: ['FBtr0112464'] 2021-10-25 09:34:30.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261933: ['FBtr0075952'] 2021-10-25 09:34:30.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085298 has a single transcript. 2021-10-25 09:34:30.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261933 has a single transcript. 2021-10-25 09:34:30.034 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2238013, 2238307), (2238550, 2239092), (2239916, 2239978), (2240260, 2240758), (2241044, 2241103), (2241044, 2241109), (2241285, 2241347), (2241563, 2241618), (2241943, 2242004), (2242273, 2242334), (2242429, 2242483), (2242635, 2242881)] 2021-10-25 09:34:30.035 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.035 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085300: ['FBtr0112466'] 2021-10-25 09:34:30.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085300 has a single transcript. 2021-10-25 09:34:30.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261934: ['FBtr0330145', 'FBtr0303748', 'FBtr0303749', 'FBtr0303750', 'FBtr0303751', 'FBtr0333047'] 2021-10-25 09:34:30.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085302: ['FBtr0112468'] 2021-10-25 09:34:30.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085302 has a single transcript. 2021-10-25 09:34:30.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085303: ['FBtr0112469'] 2021-10-25 09:34:30.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085303 has a single transcript. 2021-10-25 09:34:30.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20207628, 20207867)] 2021-10-25 09:34:30.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285951: ['FBtr0075379'] 2021-10-25 09:34:30.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285951 has a single transcript. 2021-10-25 09:34:30.059 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.060 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085305: ['FBtr0112471', 'FBtr0332436'] 2021-10-25 09:34:30.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285952: ['FBtr0072172', 'FBtr0072173'] 2021-10-25 09:34:30.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033271: ['FBtr0088809', 'FBtr0307066', 'FBtr0307067'] 2021-10-25 09:34:30.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029506: ['FBtr0086180', 'FBtr0336871'] 2021-10-25 09:34:30.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040508: ['FBtr0080413', 'FBtr0100494'] 2021-10-25 09:34:30.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036951: ['FBtr0074856', 'FBtr0332695'] 2021-10-25 09:34:30.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24057902, 24058483), (24057906, 24058483), (24058691, 24058931), (24059133, 24059195), (24059282, 24059338)] 2021-10-25 09:34:30.113 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24059195, 24059483, 'FBtr0072173_exon_4') contains intron (24059282, 24059338) 2021-10-25 09:34:30.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072173_exon_4'] 2021-10-25 09:34:30.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15925648, 15925708), (15926302, 15926372)] 2021-10-25 09:34:30.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.132 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12912699, 12912747), (12912888, 12912944), (12913104, 12913166), (12913950, 12914012), (12914113, 12914172), (12914512, 12914622), (12915073, 12915123), (12915485, 12915542), (12915637, 12915702), (12915854, 12915912), (12916057, 12916170)] 2021-10-25 09:34:30.133 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12914012, 12914512, 'FBtr0100494_exon_5') contains intron (12914113, 12914172) 2021-10-25 09:34:30.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100494_exon_5'] 2021-10-25 09:34:30.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8160001, 8160054), (8160929, 8161410), (8160929, 8161032), (8161268, 8161410)] 2021-10-25 09:34:30.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7012335, 7013032), (7012553, 7013032), (7013116, 7017012), (7017375, 7017434), (7017626, 7017689)] 2021-10-25 09:34:30.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20211752, 20212023)] 2021-10-25 09:34:30.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085306: ['FBtr0332160', 'FBtr0346517'] 2021-10-25 09:34:30.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285954: ['FBtr0074217', 'FBtr0334990', 'FBtr0334991', 'FBtr0334992'] 2021-10-25 09:34:30.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003448: ['FBtr0080739'] 2021-10-25 09:34:30.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003448 has a single transcript. 2021-10-25 09:34:30.191 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6733067, 6733128), (6737286, 6737352), (6737477, 6737534), (6737672, 6738703), (6738098, 6738703), (6739921, 6740304), (6739921, 6740666), (6740873, 6740956), (6741639, 6741701), (6741790, 6741914), (6742049, 6743025), (6742049, 6742641)] 2021-10-25 09:34:30.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003449: ['FBtr0070748'] 2021-10-25 09:34:30.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003449 has a single transcript. 2021-10-25 09:34:30.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040509: ['FBtr0080414'] 2021-10-25 09:34:30.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040509 has a single transcript. 2021-10-25 09:34:30.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029507: ['FBtr0086181', 'FBtr0345536'] 2021-10-25 09:34:30.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003450: ['FBtr0082716', 'FBtr0112833', 'FBtr0334520'] 2021-10-25 09:34:30.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040510: ['FBtr0080415', 'FBtr0305490', 'FBtr0305491', 'FBtr0344132', 'FBtr0333225'] 2021-10-25 09:34:30.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5369595, 5369654), (5370423, 5370485), (5371376, 5371434), (5371501, 5371724)] 2021-10-25 09:34:30.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036952: ['FBtr0074853', 'FBtr0074854', 'FBtr0074855', 'FBtr0332694', 'FBtr0310468'] 2021-10-25 09:34:30.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033272: ['FBtr0088807'] 2021-10-25 09:34:30.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033272 has a single transcript. 2021-10-25 09:34:30.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7010045, 7010102), (7010300, 7010431), (7010593, 7010662), (7010854, 7011591)] 2021-10-25 09:34:30.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033273: ['FBtr0088789'] 2021-10-25 09:34:30.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033273 has a single transcript. 2021-10-25 09:34:30.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033274: ['FBtr0088805'] 2021-10-25 09:34:30.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033274 has a single transcript. 2021-10-25 09:34:30.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033275: ['FBtr0088804'] 2021-10-25 09:34:30.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033275 has a single transcript. 2021-10-25 09:34:30.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16288957, 16289026), (16288957, 16289225), (16289113, 16289225), (16289158, 16289225), (16289322, 16291056), (16289322, 16291940), (16291091, 16291940), (16292110, 16292194), (16292643, 16292885)] 2021-10-25 09:34:30.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13040784, 13040843), (13040784, 13040839), (13041101, 13041157), (13041538, 13041602), (13041741, 13042738)] 2021-10-25 09:34:30.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033277: ['FBtr0088794'] 2021-10-25 09:34:30.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033277 has a single transcript. 2021-10-25 09:34:30.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085307: ['FBtr0112473'] 2021-10-25 09:34:30.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085307 has a single transcript. 2021-10-25 09:34:30.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033278: ['FBtr0088796', 'FBtr0339312'] 2021-10-25 09:34:30.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085308: ['FBtr0112474', 'FBtr0333932'] 2021-10-25 09:34:30.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029508: ['FBtr0086171', 'FBtr0086172', 'FBtr0086173'] 2021-10-25 09:34:30.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12921215, 12921266), (12921407, 12921461), (12921621, 12921773), (12922549, 12922691), (12922549, 12922753), (12922554, 12922691), (12922792, 12922846), (12923192, 12923254), (12923705, 12923765), (12924127, 12924184), (12924279, 12924330), (12924279, 12924343), (12924495, 12924543), (12924495, 12924558), (12924688, 12924758)] 2021-10-25 09:34:30.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.320 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8259909, 8259995)] 2021-10-25 09:34:30.324 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8259840, 8260483, 'FBtr0088796_exon_1') contains intron (8259909, 8259995) 2021-10-25 09:34:30.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088796_exon_1'] 2021-10-25 09:34:30.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17402737, 17402915), (17403047, 17403108), (17403050, 17403108)] 2021-10-25 09:34:30.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20219663, 20220060), (20219663, 20220096), (20219663, 20220344), (20220235, 20220344)] 2021-10-25 09:34:30.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6992777, 6994372), (6992777, 6994378), (6994484, 6996675), (6994484, 7002964), (6996867, 6996930), (6997092, 6997158), (6997353, 6997616), (7003156, 7003219), (7003381, 7003447), (7003642, 7003904)] 2021-10-25 09:34:30.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003459: ['FBtr0075728', 'FBtr0333041', 'FBtr0333042'] 2021-10-25 09:34:30.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033279: ['FBtr0088802', 'FBtr0339313'] 2021-10-25 09:34:30.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085309: ['FBtr0112476'] 2021-10-25 09:34:30.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085309 has a single transcript. 2021-10-25 09:34:30.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085310: ['FBtr0112477'] 2021-10-25 09:34:30.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085310 has a single transcript. 2021-10-25 09:34:30.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085311: ['FBtr0112478', 'FBtr0347115'] 2021-10-25 09:34:30.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8261190, 8261254)] 2021-10-25 09:34:30.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8260646, 8261463, 'FBtr0088802_exon_1') contains intron (8261190, 8261254) 2021-10-25 09:34:30.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088802_exon_1'] 2021-10-25 09:34:30.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285955: ['FBtr0112630', 'FBtr0112631', 'FBtr0112632'] 2021-10-25 09:34:30.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261938: ['FBtr0332273', 'FBtr0077989'] 2021-10-25 09:34:30.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14406837, 14408745), (14406837, 14409614)] 2021-10-25 09:34:30.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18695275, 18695344)] 2021-10-25 09:34:30.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029512: ['FBtr0082593'] 2021-10-25 09:34:30.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029512 has a single transcript. 2021-10-25 09:34:30.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1103820, 1103878), (1105101, 1105158), (1106298, 1106355), (1107106, 1107160), (1107316, 1107372), (1107757, 1107811), (1107949, 1108015)] 2021-10-25 09:34:30.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029514: ['FBtr0072680', 'FBtr0310160'] 2021-10-25 09:34:30.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033280: ['FBtr0088801'] 2021-10-25 09:34:30.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033280 has a single transcript. 2021-10-25 09:34:30.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033283: ['FBtr0088739'] 2021-10-25 09:34:30.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033283 has a single transcript. 2021-10-25 09:34:30.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033285: ['FBtr0089732'] 2021-10-25 09:34:30.488 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033285 has a single transcript. 2021-10-25 09:34:30.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14392889, 14392951), (14393131, 14393204), (14393477, 14393531), (14394018, 14394110), (14395755, 14395874), (14396026, 14399718), (14399790, 14408153), (14399790, 14404988), (14408196, 14408679), (14409565, 14409816), (14410487, 14416433), (14417033, 14427036), (14427761, 14431973), (14433205, 14451953), (14452006, 14480641), (14480912, 14481579)] 2021-10-25 09:34:30.493 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14480641, 14481713, 'FBtr0112630_exon_1') contains intron (14480912, 14481579) 2021-10-25 09:34:30.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112630_exon_1'] 2021-10-25 09:34:30.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033286: ['FBtr0088765', 'FBtr0088766'] 2021-10-25 09:34:30.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085312: ['FBtr0112479'] 2021-10-25 09:34:30.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085312 has a single transcript. 2021-10-25 09:34:30.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1351471, 1351528), (1351789, 1351852)] 2021-10-25 09:34:30.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040512: ['FBtr0075352', 'FBtr0075351', 'FBtr0075353'] 2021-10-25 09:34:30.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085313: ['FBtr0112480'] 2021-10-25 09:34:30.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085313 has a single transcript. 2021-10-25 09:34:30.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036953: ['FBtr0074823', 'FBtr0332692'] 2021-10-25 09:34:30.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261952: ['FBtr0300579'] 2021-10-25 09:34:30.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261952 has a single transcript. 2021-10-25 09:34:30.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085314: ['FBtr0339151'] 2021-10-25 09:34:30.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085314 has a single transcript. 2021-10-25 09:34:30.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085315: ['FBtr0112482', 'FBtr0335422'] 2021-10-25 09:34:30.537 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8369880, 8369935)] 2021-10-25 09:34:30.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8368343, 8370038, 'FBtr0088765_exon_1') contains intron (8369880, 8369935) 2021-10-25 09:34:30.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088765_exon_1'] 2021-10-25 09:34:30.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261953: ['FBtr0078419', 'FBtr0078418', 'FBtr0333465', 'FBtr0333466', 'FBtr0333467', 'FBtr0333468'] 2021-10-25 09:34:30.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003460: ['FBtr0088970'] 2021-10-25 09:34:30.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003460 has a single transcript. 2021-10-25 09:34:30.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003462: ['FBtr0076229', 'FBtr0333559'] 2021-10-25 09:34:30.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20221858, 20221919)] 2021-10-25 09:34:30.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16671842, 16672453), (16672544, 16673056), (16673424, 16673481), (16673424, 16673522)] 2021-10-25 09:34:30.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19715677, 19715733)] 2021-10-25 09:34:30.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029518: ['FBtr0332988', 'FBtr0332989', 'FBtr0308207'] 2021-10-25 09:34:30.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033287: ['FBtr0088740'] 2021-10-25 09:34:30.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033287 has a single transcript. 2021-10-25 09:34:30.603 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11112848, 11113531), (11112848, 11113573)] 2021-10-25 09:34:30.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033289: ['FBtr0088764', 'FBtr0290124'] 2021-10-25 09:34:30.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285958: ['FBtr0100588', 'FBtr0346860'] 2021-10-25 09:34:30.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036956: ['FBtr0074827'] 2021-10-25 09:34:30.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036956 has a single transcript. 2021-10-25 09:34:30.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036958: ['FBtr0074850', 'FBtr0074851', 'FBtr0306326', 'FBtr0306327', 'FBtr0306328', 'FBtr0306329', 'FBtr0302113', 'FBtr0308204'] 2021-10-25 09:34:30.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085316: ['FBtr0112483'] 2021-10-25 09:34:30.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085316 has a single transcript. 2021-10-25 09:34:30.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085317: ['FBtr0300623'] 2021-10-25 09:34:30.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085317 has a single transcript. 2021-10-25 09:34:30.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(266841, 266962), (266841, 266950), (266841, 266957)] 2021-10-25 09:34:30.662 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003463: ['FBtr0074063', 'FBtr0340346', 'FBtr0331760'] 2021-10-25 09:34:30.666 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8396640, 8396702), (8396865, 8396927), (8397355, 8397613), (8398159, 8403890), (8404285, 8411570), (8404285, 8411096)] 2021-10-25 09:34:30.667 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085318: ['FBtr0307053', 'FBtr0290252'] 2021-10-25 09:34:30.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11519014, 11519078), (11519494, 11519557), (11520034, 11520105), (11520212, 11520293), (11520435, 11520508), (11522506, 11522557)] 2021-10-25 09:34:30.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21586896, 21609418), (21599338, 21609418), (21608380, 21609418), (21609649, 21609718), (21609649, 21609700), (21609886, 21611142), (21611350, 21611994), (21612184, 21612244), (21612509, 21612612), (21612780, 21612843)] 2021-10-25 09:34:30.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040513: ['FBtr0089002', 'FBtr0336926', 'FBtr0299801'] 2021-10-25 09:34:30.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23507258, 23507328)] 2021-10-25 09:34:30.712 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23506907, 23507476, 'FBtr0290252_exon_1') contains intron (23507258, 23507328) 2021-10-25 09:34:30.712 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290252_exon_1'] 2021-10-25 09:34:30.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033292: ['FBtr0088760', 'FBtr0331956'] 2021-10-25 09:34:30.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15605366, 15605488), (15607806, 15607973), (15608033, 15613217), (15613350, 15614796), (15614906, 15625429), (15626232, 15632808)] 2021-10-25 09:34:30.729 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.730 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285962: ['FBtr0472692', 'FBtr0472693', 'FBtr0472694'] 2021-10-25 09:34:30.749 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7444285, 7444348), (7445517, 7445581)] 2021-10-25 09:34:30.749 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7443823, 7445517, 'FBtr0089002_exon_2') contains intron (7444285, 7444348) 2021-10-25 09:34:30.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089002_exon_2'] 2021-10-25 09:34:30.750 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029521: ['FBtr0070070'] 2021-10-25 09:34:30.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029521 has a single transcript. 2021-10-25 09:34:30.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8439699, 8439754), (8439937, 8439991), (8440232, 8440349), (8440511, 8440570), (8440697, 8440754), (8440824, 8440916), (8440824, 8441381), (8441661, 8441714), (8441824, 8442586)] 2021-10-25 09:34:30.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085319: ['FBtr0299531'] 2021-10-25 09:34:30.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085319 has a single transcript. 2021-10-25 09:34:30.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029522: ['FBtr0070076', 'FBtr0112947'] 2021-10-25 09:34:30.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085320: ['FBtr0112487'] 2021-10-25 09:34:30.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085320 has a single transcript. 2021-10-25 09:34:30.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085321: ['FBtr0112488'] 2021-10-25 09:34:30.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085321 has a single transcript. 2021-10-25 09:34:30.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9864820, 9864895), (9865051, 9865123), (9865069, 9865123), (9865227, 9865289), (9865354, 9865423), (9865478, 9874820), (9865482, 9870296)] 2021-10-25 09:34:30.798 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9864509, 9865069, 'FBtr0472692_exon_5') contains intron (9864820, 9864895) 2021-10-25 09:34:30.799 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9864509, 9865069, 'FBtr0472693_exon_4') contains intron (9864820, 9864895) 2021-10-25 09:34:30.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0472692_exon_5', 'FBtr0472693_exon_4'] 2021-10-25 09:34:30.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085322: ['FBtr0112489', 'FBtr0339263'] 2021-10-25 09:34:30.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(477291, 477606), (477931, 478012)] 2021-10-25 09:34:30.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20233948, 20234007), (20234190, 20234263), (20234547, 20234618), (20234868, 20234928), (20235066, 20235134), (20235434, 20235501), (20235677, 20236433), (20236328, 20236433), (20237910, 20238737), (20237910, 20239862), (20239544, 20239862), (20239547, 20239862), (20239610, 20239862), (20239613, 20239862), (20240532, 20241118), (20240532, 20241274), (20240532, 20241318), (20240532, 20241844)] 2021-10-25 09:34:30.818 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20236027, 20237910, 'FBtr0302113_exon_3') contains intron (20236328, 20236433) 2021-10-25 09:34:30.819 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20236027, 20237910, 'FBtr0308204_exon_3') contains intron (20236328, 20236433) 2021-10-25 09:34:30.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302113_exon_3', 'FBtr0308204_exon_3'] 2021-10-25 09:34:30.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033294: ['FBtr0088748'] 2021-10-25 09:34:30.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033294 has a single transcript. 2021-10-25 09:34:30.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033296: ['FBtr0088757', 'FBtr0345489'] 2021-10-25 09:34:30.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040514: ['FBtr0302055'] 2021-10-25 09:34:30.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040514 has a single transcript. 2021-10-25 09:34:30.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27165041, 27165108), (27165370, 27165431)] 2021-10-25 09:34:30.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003464: ['FBtr0089679', 'FBtr0089678', 'FBtr0301583', 'FBtr0346608'] 2021-10-25 09:34:30.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040519: ['FBtr0085944', 'FBtr0306060'] 2021-10-25 09:34:30.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029523: ['FBtr0070097'] 2021-10-25 09:34:30.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029523 has a single transcript. 2021-10-25 09:34:30.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8469633, 8469710), (8469854, 8470078)] 2021-10-25 09:34:30.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029524: ['FBtr0070078', 'FBtr0336920', 'FBtr0336921', 'FBtr0343501'] 2021-10-25 09:34:30.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22105051, 22105115), (22105067, 22105115), (22105297, 22105350)] 2021-10-25 09:34:30.892 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085324: ['FBtr0112491'] 2021-10-25 09:34:30.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085324 has a single transcript. 2021-10-25 09:34:30.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085325: ['FBtr0112492'] 2021-10-25 09:34:30.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085325 has a single transcript. 2021-10-25 09:34:30.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085326: ['FBtr0112493'] 2021-10-25 09:34:30.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085326 has a single transcript. 2021-10-25 09:34:30.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285963: ['FBtr0472695', 'FBtr0472696', 'FBtr0472697', 'FBtr0472698', 'FBtr0472699', 'FBtr0472700'] 2021-10-25 09:34:30.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261954: ['FBtr0307289', 'FBtr0307290', 'FBtr0343522', 'FBtr0303046', 'FBtr0070326', 'FBtr0303047'] 2021-10-25 09:34:30.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085327: ['FBtr0112494'] 2021-10-25 09:34:30.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085327 has a single transcript. 2021-10-25 09:34:30.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085328: ['FBtr0112495', 'FBtr0304738'] 2021-10-25 09:34:30.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033297: ['FBtr0088752'] 2021-10-25 09:34:30.939 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033297 has a single transcript. 2021-10-25 09:34:30.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21350850, 21351859), (21351766, 21351859), (21352485, 21352752), (21353063, 21354093), (21353665, 21354093), (21354413, 21354479), (21354413, 21354482), (21356068, 21356140), (21356647, 21356706), (21356973, 21357044), (21357187, 21357256)] 2021-10-25 09:34:30.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033301: ['FBtr0088736'] 2021-10-25 09:34:30.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033301 has a single transcript. 2021-10-25 09:34:30.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040524: ['FBtr0081821', 'FBtr0308077', 'FBtr0308078', 'FBtr0335231'] 2021-10-25 09:34:30.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033302: ['FBtr0302331', 'FBtr0345575'] 2021-10-25 09:34:30.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(481997, 482117), (482433, 482517)] 2021-10-25 09:34:30.974 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (482117, 482768, 'FBtr0336920_exon_2') contains intron (482433, 482517) 2021-10-25 09:34:30.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336920_exon_2'] 2021-10-25 09:34:30.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:30.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30249802, 30249864), (30249912, 30250260)] 2021-10-25 09:34:30.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:30.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8564768, 8564825)] 2021-10-25 09:34:31.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085329: ['FBtr0112496', 'FBtr0305269'] 2021-10-25 09:34:31.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8008500, 8008551), (8008661, 8008775), (8008792, 8008846), (8009088, 8009223), (8009154, 8009223)] 2021-10-25 09:34:31.038 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8008846, 8009239, 'FBtr0081821_exon_1') contains intron (8009088, 8009223) 2021-10-25 09:34:31.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081821_exon_1'] 2021-10-25 09:34:31.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033303: ['FBtr0088689', 'FBtr0333553'] 2021-10-25 09:34:31.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2010960, 2014341), (2012353, 2014359), (2012401, 2014341), (2012657, 2014341), (2013206, 2014341), (2013785, 2014341), (2018004, 2018079), (2018086, 2018704), (2018209, 2018704), (2018938, 2019057), (2018938, 2019039), (2019506, 2019567), (2019506, 2019570), (2019737, 2019847), (2021117, 2021171)] 2021-10-25 09:34:31.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26915908, 26916502), (26916562, 26924633), (26923753, 26924633), (26925261, 26926395), (26925261, 26938444), (26925261, 26935958), (26926431, 26938444), (26926431, 26935958), (26936291, 26938444), (26938631, 26938932), (26939250, 26941461), (26941833, 26941892), (26943323, 26943385), (26943509, 26943571), (26943762, 26943826), (26943994, 26944056), (26944200, 26944267)] 2021-10-25 09:34:31.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.082 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30306098, 30306158), (30306291, 30306347), (30306294, 30306347), (30306430, 30306519), (30306430, 30306509)] 2021-10-25 09:34:31.083 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.083 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003475: ['FBtr0081352', 'FBtr0081353', 'FBtr0081354', 'FBtr0081355', 'FBtr0301884', 'FBtr0339233', 'FBtr0339234', 'FBtr0306556', 'FBtr0307893', 'FBtr0307894'] 2021-10-25 09:34:31.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029525: ['FBtr0070094'] 2021-10-25 09:34:31.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029525 has a single transcript. 2021-10-25 09:34:31.107 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8569636, 8569977), (8569768, 8569882)] 2021-10-25 09:34:31.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029526: ['FBtr0070095', 'FBtr0301337', 'FBtr0339441'] 2021-10-25 09:34:31.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085330: ['FBtr0112497'] 2021-10-25 09:34:31.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085330 has a single transcript. 2021-10-25 09:34:31.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036959: ['FBtr0074828', 'FBtr0074829'] 2021-10-25 09:34:31.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085331: ['FBtr0301078'] 2021-10-25 09:34:31.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085331 has a single transcript. 2021-10-25 09:34:31.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033304: ['FBtr0088690'] 2021-10-25 09:34:31.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033304 has a single transcript. 2021-10-25 09:34:31.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085332: ['FBtr0112499'] 2021-10-25 09:34:31.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085332 has a single transcript. 2021-10-25 09:34:31.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085334: ['FBtr0112501'] 2021-10-25 09:34:31.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085334 has a single transcript. 2021-10-25 09:34:31.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(480758, 480912), (481169, 481232), (481512, 481601), (481562, 481601)] 2021-10-25 09:34:31.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (479863, 481169, 'FBtr0070095_exon_3') contains intron (480758, 480912) 2021-10-25 09:34:31.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (480153, 481169, 'FBtr0301337_exon_3') contains intron (480758, 480912) 2021-10-25 09:34:31.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070095_exon_3', 'FBtr0301337_exon_3'] 2021-10-25 09:34:31.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033307: ['FBtr0088691'] 2021-10-25 09:34:31.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033307 has a single transcript. 2021-10-25 09:34:31.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085336: ['FBtr0301079'] 2021-10-25 09:34:31.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085336 has a single transcript. 2021-10-25 09:34:31.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040528: ['FBtr0300372'] 2021-10-25 09:34:31.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040528 has a single transcript. 2021-10-25 09:34:31.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033308: ['FBtr0290280'] 2021-10-25 09:34:31.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033308 has a single transcript. 2021-10-25 09:34:31.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085337: ['FBtr0445441'] 2021-10-25 09:34:31.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085337 has a single transcript. 2021-10-25 09:34:31.187 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20241540, 20244164), (20241684, 20244164), (20244577, 20244937)] 2021-10-25 09:34:31.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085339: ['FBtr0333516', 'FBtr0112506', 'FBtr0346453', 'FBtr0347411'] 2021-10-25 09:34:31.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040529: ['FBtr0081855', 'FBtr0305680'] 2021-10-25 09:34:31.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033309: ['FBtr0088730', 'FBtr0339357'] 2021-10-25 09:34:31.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8340089, 8340427), (8340771, 8340912), (8340771, 8340823)] 2021-10-25 09:34:31.236 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.237 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8597847, 8598112), (8598289, 8598571), (8599007, 8599270), (8599403, 8599471), (8599701, 8599810), (8599858, 8599918)] 2021-10-25 09:34:31.240 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8599810, 8599962, 'FBtr0088730_exon_1') contains intron (8599858, 8599918) 2021-10-25 09:34:31.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088730_exon_1'] 2021-10-25 09:34:31.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036962: ['FBtr0074849'] 2021-10-25 09:34:31.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036962 has a single transcript. 2021-10-25 09:34:31.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036964: ['FBtr0074847'] 2021-10-25 09:34:31.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036964 has a single transcript. 2021-10-25 09:34:31.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029529: ['FBtr0070160'] 2021-10-25 09:34:31.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029529 has a single transcript. 2021-10-25 09:34:31.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036967: ['FBtr0074837', 'FBtr0074838', 'FBtr0344228', 'FBtr0332775'] 2021-10-25 09:34:31.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029531: ['FBtr0070150'] 2021-10-25 09:34:31.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029531 has a single transcript. 2021-10-25 09:34:31.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029532: ['FBtr0070149'] 2021-10-25 09:34:31.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029532 has a single transcript. 2021-10-25 09:34:31.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6664587, 6664930), (6665791, 6668341), (6668887, 6668945), (6669690, 6669763), (6670513, 6674300), (6674228, 6674305), (6674228, 6674300)] 2021-10-25 09:34:31.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029535: ['FBtr0070142'] 2021-10-25 09:34:31.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029535 has a single transcript. 2021-10-25 09:34:31.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029539: ['FBtr0070164', 'FBtr0310165'] 2021-10-25 09:34:31.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040531: ['FBtr0112769', 'FBtr0339331'] 2021-10-25 09:34:31.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261955: ['FBtr0070906', 'FBtr0070907'] 2021-10-25 09:34:31.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033312: ['FBtr0310502'] 2021-10-25 09:34:31.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033312 has a single transcript. 2021-10-25 09:34:31.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033313: ['FBtr0290112', 'FBtr0301363', 'FBtr0310448', 'FBtr0310449', 'FBtr0310450', 'FBtr0305080', 'FBtr0305081', 'FBtr0305082'] 2021-10-25 09:34:31.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285966: ['FBtr0472836'] 2021-10-25 09:34:31.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285966 has a single transcript. 2021-10-25 09:34:31.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285970: ['FBtr0077374'] 2021-10-25 09:34:31.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285970 has a single transcript. 2021-10-25 09:34:31.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20312414, 20322009), (20322080, 20334080), (20334198, 20334620), (20334730, 20336286), (20336404, 20336466), (20336404, 20336463), (20336404, 20336469), (20336549, 20339058), (20336549, 20339244), (20339088, 20339244), (20339375, 20339581), (20339693, 20339979), (20340112, 20343598), (20342481, 20343598), (20343672, 20343742), (20343947, 20345524), (20343947, 20344654), (20343947, 20345172), (20345259, 20345524), (20345458, 20345524), (20345670, 20345905), (20346244, 20346307), (20346511, 20346577), (20346891, 20346949)] 2021-10-25 09:34:31.333 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6350954, 6358901), (6352481, 6358901), (6359879, 6359991)] 2021-10-25 09:34:31.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.334 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.334 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285971: ['FBtr0079674', 'FBtr0332008'] 2021-10-25 09:34:31.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:31.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(894517, 894602), (894517, 894589)] 2021-10-25 09:34:31.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.338 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20299475, 20303066), (20302502, 20303066), (20302837, 20303066), (20303115, 20303173), (20303345, 20307830), (20307757, 20307830), (20307922, 20308093), (20308347, 20308408), (20308616, 20308746)] 2021-10-25 09:34:31.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8464774, 8464832)] 2021-10-25 09:34:31.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.382 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261963: ['FBtr0310358', 'FBtr0079093'] 2021-10-25 09:34:31.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040532: ['FBtr0081920', 'FBtr0445733', 'FBtr0445734'] 2021-10-25 09:34:31.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029552: ['FBtr0070172'] 2021-10-25 09:34:31.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029552 has a single transcript. 2021-10-25 09:34:31.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029568: ['FBtr0070203'] 2021-10-25 09:34:31.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029568 has a single transcript. 2021-10-25 09:34:31.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029573: ['FBtr0070213'] 2021-10-25 09:34:31.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029573 has a single transcript. 2021-10-25 09:34:31.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029580: ['FBtr0070254'] 2021-10-25 09:34:31.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029580 has a single transcript. 2021-10-25 09:34:31.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5462104, 5463818), (5464269, 5465219), (5465505, 5465893)] 2021-10-25 09:34:31.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029587: ['FBtr0273400', 'FBtr0308320'] 2021-10-25 09:34:31.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085340: ['FBtr0112509'] 2021-10-25 09:34:31.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085340 has a single transcript. 2021-10-25 09:34:31.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085341: ['FBtr0112510', 'FBtr0333152', 'FBtr0346513'] 2021-10-25 09:34:31.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285975: ['FBtr0472926'] 2021-10-25 09:34:31.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285975 has a single transcript. 2021-10-25 09:34:31.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8822125, 8822468), (8822173, 8822468), (8822666, 8822723)] 2021-10-25 09:34:31.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8822007, 8822666, 'FBtr0445734_exon_1') contains intron (8822125, 8822468) 2021-10-25 09:34:31.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445734_exon_1'] 2021-10-25 09:34:31.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285976: ['FBtr0472927'] 2021-10-25 09:34:31.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285976 has a single transcript. 2021-10-25 09:34:31.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285991: ['FBtr0472915', 'FBtr0472916', 'FBtr0472917'] 2021-10-25 09:34:31.479 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1683266, 1683320), (1683760, 1683828), (1684024, 1684077)] 2021-10-25 09:34:31.480 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.480 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261973: ['FBtr0303791'] 2021-10-25 09:34:31.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261973 has a single transcript. 2021-10-25 09:34:31.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036969: ['FBtr0074843'] 2021-10-25 09:34:31.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036969 has a single transcript. 2021-10-25 09:34:31.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261974: ['FBtr0303792'] 2021-10-25 09:34:31.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261974 has a single transcript. 2021-10-25 09:34:31.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036970: ['FBtr0078172', 'FBtr0331816'] 2021-10-25 09:34:31.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261975: ['FBtr0304022'] 2021-10-25 09:34:31.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261975 has a single transcript. 2021-10-25 09:34:31.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8615245, 8615406), (8615249, 8615406), (8615263, 8615406), (8615476, 8615902), (8616003, 8616326), (8616078, 8616326), (8616156, 8616326), (8616516, 8616699), (8618171, 8618233), (8618461, 8618530), (8618461, 8618518), (8618729, 8618787), (8619028, 8620509), (8620675, 8620730), (8620960, 8621029), (8621127, 8621192), (8622977, 8623041)] 2021-10-25 09:34:31.507 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8615902, 8616516, 'FBtr0305082_exon_3') contains intron (8616003, 8616326) 2021-10-25 09:34:31.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305082_exon_3'] 2021-10-25 09:34:31.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261976: ['FBtr0331449', 'FBtr0331450'] 2021-10-25 09:34:31.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13209958, 13210061), (13210197, 13210255), (13210407, 13210458), (13210699, 13210840), (13210699, 13210749), (13210979, 13211034), (13211141, 13211206), (13211517, 13211593), (13211729, 13211793), (13212011, 13212066)] 2021-10-25 09:34:31.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9788370, 9788782), (9789306, 9789366), (9789615, 9789674), (9789615, 9789790), (9789732, 9789790), (9789739, 9789790), (9790309, 9790615)] 2021-10-25 09:34:31.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20342650, 20342715), (20342650, 20342705), (20343060, 20343127), (20343431, 20343498), (20343852, 20343909)] 2021-10-25 09:34:31.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029588: ['FBtr0089694'] 2021-10-25 09:34:31.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029588 has a single transcript. 2021-10-25 09:34:31.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040534: ['FBtr0082006'] 2021-10-25 09:34:31.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040534 has a single transcript. 2021-10-25 09:34:31.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029589: ['FBtr0070374', 'FBtr0309971'] 2021-10-25 09:34:31.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4386705, 4386763), (4387013, 4387319)] 2021-10-25 09:34:31.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040551: ['FBtr0082735', 'FBtr0335222'] 2021-10-25 09:34:31.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036972: ['FBtr0347193'] 2021-10-25 09:34:31.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036972 has a single transcript. 2021-10-25 09:34:31.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036973: ['FBtr0078242'] 2021-10-25 09:34:31.607 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036973 has a single transcript. 2021-10-25 09:34:31.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1820118, 1820182), (1820121, 1820182), (1820240, 1820306)] 2021-10-25 09:34:31.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.614 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13260418, 13261604), (13260486, 13261604), (13261770, 13262037)] 2021-10-25 09:34:31.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085342: ['FBtr0112511'] 2021-10-25 09:34:31.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085342 has a single transcript. 2021-10-25 09:34:31.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036974: ['FBtr0078173', 'FBtr0078174', 'FBtr0078175', 'FBtr0078176', 'FBtr0078177', 'FBtr0078178', 'FBtr0331817', 'FBtr0331818'] 2021-10-25 09:34:31.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261983: ['FBtr0080197', 'FBtr0306138'] 2021-10-25 09:34:31.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085343: ['FBtr0112512'] 2021-10-25 09:34:31.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085343 has a single transcript. 2021-10-25 09:34:31.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285992: ['FBtr0472837'] 2021-10-25 09:34:31.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285992 has a single transcript. 2021-10-25 09:34:31.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085344: ['FBtr0300287'] 2021-10-25 09:34:31.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085344 has a single transcript. 2021-10-25 09:34:31.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285993: ['FBtr0472838'] 2021-10-25 09:34:31.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285993 has a single transcript. 2021-10-25 09:34:31.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0285994: ['FBtr0472835'] 2021-10-25 09:34:31.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0285994 has a single transcript. 2021-10-25 09:34:31.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029590: ['FBtr0309970'] 2021-10-25 09:34:31.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029590 has a single transcript. 2021-10-25 09:34:31.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085345: ['FBtr0112514'] 2021-10-25 09:34:31.663 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085345 has a single transcript. 2021-10-25 09:34:31.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040553: ['FBtr0082761'] 2021-10-25 09:34:31.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040553 has a single transcript. 2021-10-25 09:34:31.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0286004: ['FBtr0472924'] 2021-10-25 09:34:31.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0286004 has a single transcript. 2021-10-25 09:34:31.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029594: ['FBtr0070313', 'FBtr0331384'] 2021-10-25 09:34:31.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040554: ['FBtr0309273', 'FBtr0309274', 'FBtr0346963'] 2021-10-25 09:34:31.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085346: ['FBtr0112516'] 2021-10-25 09:34:31.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085346 has a single transcript. 2021-10-25 09:34:31.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0286005: ['FBtr0472925'] 2021-10-25 09:34:31.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0286005 has a single transcript. 2021-10-25 09:34:31.677 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11107121, 11107208), (11108807, 11108865), (11109297, 11109355), (11109507, 11110158), (11109507, 11110104), (11110249, 11110315)] 2021-10-25 09:34:31.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085349: ['FBtr0445214'] 2021-10-25 09:34:31.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085349 has a single transcript. 2021-10-25 09:34:31.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085350: ['FBtr0112523'] 2021-10-25 09:34:31.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085350 has a single transcript. 2021-10-25 09:34:31.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085351: ['FBtr0112524'] 2021-10-25 09:34:31.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085351 has a single transcript. 2021-10-25 09:34:31.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085352: ['FBtr0112525'] 2021-10-25 09:34:31.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085352 has a single transcript. 2021-10-25 09:34:31.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085353: ['FBtr0112526'] 2021-10-25 09:34:31.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085353 has a single transcript. 2021-10-25 09:34:31.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1880623, 1880682), (1880946, 1881019)] 2021-10-25 09:34:31.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085354: ['FBtr0112527', 'FBtr0339825', 'FBtr0339826'] 2021-10-25 09:34:31.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13456267, 13457762), (13458545, 13465706), (13464399, 13465706)] 2021-10-25 09:34:31.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261984: ['FBtr0113248'] 2021-10-25 09:34:31.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261984 has a single transcript. 2021-10-25 09:34:31.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261985: ['FBtr0306559', 'FBtr0306560', 'FBtr0306561', 'FBtr0306562', 'FBtr0306563'] 2021-10-25 09:34:31.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029596: ['FBtr0070338'] 2021-10-25 09:34:31.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029596 has a single transcript. 2021-10-25 09:34:31.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003479: ['FBtr0085589', 'FBtr0085590'] 2021-10-25 09:34:31.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029603: ['FBtr0070424', 'FBtr0331383'] 2021-10-25 09:34:31.794 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20348385, 20348941), (20348408, 20348941), (20348421, 20348941), (20348650, 20348941), (20349206, 20350304), (20350480, 20350558), (20351028, 20351093), (20351249, 20351323), (20351521, 20351582), (20351730, 20352806), (20351730, 20351898), (20351730, 20353444)] 2021-10-25 09:34:31.796 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20348354, 20349206, 'FBtr0078177_exon_1') contains intron (20348385, 20348941) 2021-10-25 09:34:31.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16714966, 16715055), (16715289, 16716437), (16715289, 16720711), (16716662, 16720711), (16720774, 16721206), (16720774, 16721199)] 2021-10-25 09:34:31.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078177_exon_1'] 2021-10-25 09:34:31.796 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30055798, 30055861)] 2021-10-25 09:34:31.816 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30054695, 30056037, 'FBtr0085590_exon_1') contains intron (30055798, 30055861) 2021-10-25 09:34:31.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085590_exon_1'] 2021-10-25 09:34:31.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040565: ['FBtr0300628', 'FBtr0347219'] 2021-10-25 09:34:31.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2192972, 2193477)] 2021-10-25 09:34:31.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033315: ['FBtr0088728'] 2021-10-25 09:34:31.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033315 has a single transcript. 2021-10-25 09:34:31.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033316: ['FBtr0088695'] 2021-10-25 09:34:31.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033316 has a single transcript. 2021-10-25 09:34:31.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033317: ['FBtr0088727', 'FBtr0339356'] 2021-10-25 09:34:31.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(328468, 328988), (328468, 351366), (329025, 351366), (347658, 351366), (347779, 351366), (351286, 351366), (351778, 352299), (352407, 352475), (352568, 352629), (352771, 352837), (353687, 353760), (354446, 354499), (355124, 355198), (355376, 355437)] 2021-10-25 09:34:31.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17596776, 17596831)] 2021-10-25 09:34:31.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003480: ['FBtr0082933'] 2021-10-25 09:34:31.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003480 has a single transcript. 2021-10-25 09:34:31.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029606: ['FBtr0332380'] 2021-10-25 09:34:31.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029606 has a single transcript. 2021-10-25 09:34:31.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003482: ['FBtr0085116'] 2021-10-25 09:34:31.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003482 has a single transcript. 2021-10-25 09:34:31.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029608: ['FBtr0070416', 'FBtr0342767'] 2021-10-25 09:34:31.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003483: ['FBtr0083183'] 2021-10-25 09:34:31.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003483 has a single transcript. 2021-10-25 09:34:31.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085356: ['FBtr0112529'] 2021-10-25 09:34:31.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085356 has a single transcript. 2021-10-25 09:34:31.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003486: ['FBtr0077130', 'FBtr0346640'] 2021-10-25 09:34:31.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8631013, 8631071), (8631506, 8631632)] 2021-10-25 09:34:31.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085357: ['FBtr0112530'] 2021-10-25 09:34:31.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085357 has a single transcript. 2021-10-25 09:34:31.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085358: ['FBtr0112531', 'FBtr0344305'] 2021-10-25 09:34:31.932 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2252665, 2252723), (2252860, 2252915), (2253248, 2253316), (2253398, 2253450), (2253610, 2253957)] 2021-10-25 09:34:31.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040569: ['FBtr0445667'] 2021-10-25 09:34:31.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040569 has a single transcript. 2021-10-25 09:34:31.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:31.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040571: ['FBtr0083838', 'FBtr0300810', 'FBtr0344607'] 2021-10-25 09:34:31.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:31.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:31.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:31.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033320: ['FBtr0088725', 'FBtr0339344', 'FBtr0339345'] 2021-10-25 09:34:31.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029629: ['FBtr0070446'] 2021-10-25 09:34:31.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029629 has a single transcript. 2021-10-25 09:34:32.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029639: ['FBtr0070564'] 2021-10-25 09:34:32.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029639 has a single transcript. 2021-10-25 09:34:32.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003495: ['FBtr0085137', 'FBtr0085138', 'FBtr0085139', 'FBtr0085140', 'FBtr0085145', 'FBtr0085146', 'FBtr0112834', 'FBtr0114372'] 2021-10-25 09:34:32.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029642: ['FBtr0070551'] 2021-10-25 09:34:32.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029642 has a single transcript. 2021-10-25 09:34:32.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20039735, 20049648), (20049878, 20055727), (20049881, 20054070), (20049881, 20055727)] 2021-10-25 09:34:32.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029643: ['FBtr0070553'] 2021-10-25 09:34:32.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029643 has a single transcript. 2021-10-25 09:34:32.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085359: ['FBtr0112532', 'FBtr0346017'] 2021-10-25 09:34:32.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029644: ['FBtr0070554'] 2021-10-25 09:34:32.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029644 has a single transcript. 2021-10-25 09:34:32.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029645: ['FBtr0070555'] 2021-10-25 09:34:32.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029645 has a single transcript. 2021-10-25 09:34:32.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8694713, 8694779), (8695251, 8695714), (8695251, 8696067)] 2021-10-25 09:34:32.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029646: ['FBtr0070556'] 2021-10-25 09:34:32.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029646 has a single transcript. 2021-10-25 09:34:32.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261986: ['FBtr0084898'] 2021-10-25 09:34:32.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261986 has a single transcript. 2021-10-25 09:34:32.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029647: ['FBtr0070557'] 2021-10-25 09:34:32.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029647 has a single transcript. 2021-10-25 09:34:32.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261987: ['FBtr0083508'] 2021-10-25 09:34:32.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261987 has a single transcript. 2021-10-25 09:34:32.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029648: ['FBtr0070558', 'FBtr0332493'] 2021-10-25 09:34:32.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261988: ['FBtr0085788', 'FBtr0334555'] 2021-10-25 09:34:32.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:32.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.104 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2948148, 2948217)] 2021-10-25 09:34:32.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31405956, 31433458), (31405956, 31410353), (31410401, 31433458), (31433888, 31453310), (31453406, 31453465), (31453586, 31453650), (31454256, 31454394), (31454500, 31454574), (31454764, 31455206), (31455455, 31455527), (31455685, 31455743), (31455953, 31456047), (31456311, 31456373)] 2021-10-25 09:34:32.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040575: ['FBtr0083951', 'FBtr0334580'] 2021-10-25 09:34:32.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085360: ['FBtr0301576', 'FBtr0343165'] 2021-10-25 09:34:32.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036975: ['FBtr0078179', 'FBtr0331819', 'FBtr0331820'] 2021-10-25 09:34:32.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20559836, 20559897), (20560047, 20560161)] 2021-10-25 09:34:32.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033321: ['FBtr0088705'] 2021-10-25 09:34:32.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033321 has a single transcript. 2021-10-25 09:34:32.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029649: ['FBtr0070561', 'FBtr0332494'] 2021-10-25 09:34:32.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27065322, 27065802), (27066031, 27066098), (27066453, 27066607), (27066480, 27066607), (27066665, 27067357), (27066665, 27069143), (27066665, 27067121), (27066665, 27066728), (27066884, 27067121), (27066884, 27069143), (27067199, 27067357), (27067199, 27069143), (27067495, 27069143)] 2021-10-25 09:34:32.169 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27066607, 27066884, 'FBtr0085137_exon_3') contains intron (27066665, 27066728) 2021-10-25 09:34:32.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27066607, 27066884, 'FBtr0085138_exon_2') contains intron (27066665, 27066728) 2021-10-25 09:34:32.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085137_exon_3', 'FBtr0085138_exon_2'] 2021-10-25 09:34:32.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033322: ['FBtr0088724'] 2021-10-25 09:34:32.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033322 has a single transcript. 2021-10-25 09:34:32.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20122675, 20124895)] 2021-10-25 09:34:32.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.179 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261989: ['FBtr0303819', 'FBtr0346185'] 2021-10-25 09:34:32.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033323: ['FBtr0088706', 'FBtr0339335'] 2021-10-25 09:34:32.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:32.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040582: ['FBtr0084180', 'FBtr0347257', 'FBtr0335196'] 2021-10-25 09:34:32.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20353637, 20353958), (20354405, 20355304), (20354405, 20354799), (20354987, 20355304), (20355129, 20355304), (20356280, 20356344)] 2021-10-25 09:34:32.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8702201, 8702534), (8702353, 8702534), (8702860, 8702923), (8702998, 8703051), (8703537, 8703606), (8703755, 8703813), (8704048, 8704101)] 2021-10-25 09:34:32.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13571965, 13572029)] 2021-10-25 09:34:32.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085361: ['FBtr0112534'] 2021-10-25 09:34:32.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085361 has a single transcript. 2021-10-25 09:34:32.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085362: ['FBtr0112535', 'FBtr0347302'] 2021-10-25 09:34:32.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029656: ['FBtr0070536'] 2021-10-25 09:34:32.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029656 has a single transcript. 2021-10-25 09:34:32.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029657: ['FBtr0070534', 'FBtr0344078', 'FBtr0332302', 'FBtr0332303', 'FBtr0332304'] 2021-10-25 09:34:32.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261990: ['FBtr0303818'] 2021-10-25 09:34:32.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261990 has a single transcript. 2021-10-25 09:34:32.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033324: ['FBtr0307024', 'FBtr0339342', 'FBtr0339343'] 2021-10-25 09:34:32.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22087260, 22087317), (22087359, 22087428)] 2021-10-25 09:34:32.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:32.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261991: ['FBtr0303820'] 2021-10-25 09:34:32.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261991 has a single transcript. 2021-10-25 09:34:32.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261992: ['FBtr0303821'] 2021-10-25 09:34:32.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261992 has a single transcript. 2021-10-25 09:34:32.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261993: ['FBtr0303823'] 2021-10-25 09:34:32.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261993 has a single transcript. 2021-10-25 09:34:32.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261994: ['FBtr0303822'] 2021-10-25 09:34:32.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261994 has a single transcript. 2021-10-25 09:34:32.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036977: ['FBtr0308646', 'FBtr0308655'] 2021-10-25 09:34:32.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261995: ['FBtr0347068', 'FBtr0303825'] 2021-10-25 09:34:32.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8707361, 8707416), (8707625, 8707720), (8707651, 8707720), (8707860, 8707919), (8707860, 8707915), (8708426, 8708495), (8708570, 8708626), (8708952, 8709011), (8709232, 8709293)] 2021-10-25 09:34:32.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.344 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085366: ['FBtr0112539'] 2021-10-25 09:34:32.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085366 has a single transcript. 2021-10-25 09:34:32.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085367: ['FBtr0303204'] 2021-10-25 09:34:32.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085367 has a single transcript. 2021-10-25 09:34:32.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085369: ['FBtr0302391', 'FBtr0339572'] 2021-10-25 09:34:32.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20358707, 20358776), (20359036, 20359088), (20359224, 20359281)] 2021-10-25 09:34:32.386 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20359088, 20359820, 'FBtr0308655_exon_3') contains intron (20359224, 20359281) 2021-10-25 09:34:32.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308655_exon_3'] 2021-10-25 09:34:32.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27227941, 27228067)] 2021-10-25 09:34:32.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040588: ['FBtr0084316', 'FBtr0346733'] 2021-10-25 09:34:32.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3392891, 3393024), (3393531, 3423862), (3424292, 3448894), (3424292, 3439305), (3439453, 3447716), (3439453, 3439994), (3439453, 3445071), (3447817, 3447884), (3448067, 3448894)] 2021-10-25 09:34:32.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22767437, 22767504), (22767581, 22767647)] 2021-10-25 09:34:32.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3663306, 3673177), (3673301, 3678210), (3678302, 3678362), (3678464, 3683866), (3683968, 3684061), (3684633, 3690321), (3690479, 3690837)] 2021-10-25 09:34:32.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036978: ['FBtr0078240', 'FBtr0308647', 'FBtr0308648'] 2021-10-25 09:34:32.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261996: ['FBtr0303824'] 2021-10-25 09:34:32.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261996 has a single transcript. 2021-10-25 09:34:32.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261997: ['FBtr0303827'] 2021-10-25 09:34:32.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261997 has a single transcript. 2021-10-25 09:34:32.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033326: ['FBtr0307023'] 2021-10-25 09:34:32.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033326 has a single transcript. 2021-10-25 09:34:32.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261998: ['FBtr0307890'] 2021-10-25 09:34:32.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0261998 has a single transcript. 2021-10-25 09:34:32.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033327: ['FBtr0088708', 'FBtr0339336'] 2021-10-25 09:34:32.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0261999: ['FBtr0303797', 'FBtr0332356'] 2021-10-25 09:34:32.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040600: ['FBtr0084693', 'FBtr0339253'] 2021-10-25 09:34:32.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003499: ['FBtr0083542', 'FBtr0083543', 'FBtr0301615', 'FBtr0330050', 'FBtr0344633'] 2021-10-25 09:34:32.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20362247, 20362308), (20362436, 20362506), (20364125, 20364665), (20364125, 20364340), (20364562, 20364665), (20364896, 20365623), (20365923, 20366139)] 2021-10-25 09:34:32.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085370: ['FBtr0112544', 'FBtr0112545', 'FBtr0343830', 'FBtr0343831', 'FBtr0303162', 'FBtr0303163'] 2021-10-25 09:34:32.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:32.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.530 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16232234, 16235619), (16236949, 16237133), (16237310, 16237367), (16237445, 16237509), (16237886, 16237950), (16238099, 16238154), (16238660, 16238727), (16238970, 16239041), (16239135, 16239201), (16239623, 16239812), (16239984, 16240045)] 2021-10-25 09:34:32.532 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16239812, 16240595, 'FBtr0303797_exon_11') contains intron (16239984, 16240045) 2021-10-25 09:34:32.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303797_exon_11'] 2021-10-25 09:34:32.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:32.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033330: ['FBtr0088714'] 2021-10-25 09:34:32.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033330 has a single transcript. 2021-10-25 09:34:32.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262000: ['FBtr0303798'] 2021-10-25 09:34:32.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262000 has a single transcript. 2021-10-25 09:34:32.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262001: ['FBtr0303800'] 2021-10-25 09:34:32.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262001 has a single transcript. 2021-10-25 09:34:32.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033337: ['FBtr0088686', 'FBtr0330246'] 2021-10-25 09:34:32.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029658: ['FBtr0070532', 'FBtr0332305'] 2021-10-25 09:34:32.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262002: ['FBtr0303799'] 2021-10-25 09:34:32.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262002 has a single transcript. 2021-10-25 09:34:32.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040601: ['FBtr0306798', 'FBtr0310462', 'FBtr0334572', 'FBtr0334573'] 2021-10-25 09:34:32.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262003: ['FBtr0303828'] 2021-10-25 09:34:32.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262003 has a single transcript. 2021-10-25 09:34:32.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036979: ['FBtr0078184'] 2021-10-25 09:34:32.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262004: ['FBtr0303829'] 2021-10-25 09:34:32.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262004 has a single transcript. 2021-10-25 09:34:32.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036979 has a single transcript. 2021-10-25 09:34:32.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262005: ['FBtr0303831'] 2021-10-25 09:34:32.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262005 has a single transcript. 2021-10-25 09:34:32.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036980: ['FBtr0078185', 'FBtr0330157', 'FBtr0330158'] 2021-10-25 09:34:32.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262006: ['FBtr0303830'] 2021-10-25 09:34:32.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262006 has a single transcript. 2021-10-25 09:34:32.648 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18091454, 18095729), (18096678, 18096778), (18096913, 18126989), (18122582, 18126989), (18127655, 18130394), (18130529, 18131096)] 2021-10-25 09:34:32.649 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18130394, 18133749, 'FBtr0083542_exon_5') contains intron (18130529, 18131096) 2021-10-25 09:34:32.650 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18130394, 18133749, 'FBtr0083543_exon_3') contains intron (18130529, 18131096) 2021-10-25 09:34:32.650 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18130394, 18133749, 'FBtr0330050_exon_5') contains intron (18130529, 18131096) 2021-10-25 09:34:32.650 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18130394, 18135583, 'FBtr0344633_exon_3') contains intron (18130529, 18131096) 2021-10-25 09:34:32.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083542_exon_5', 'FBtr0083543_exon_3', 'FBtr0330050_exon_5', 'FBtr0344633_exon_3'] 2021-10-25 09:34:32.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262007: ['FBtr0303833'] 2021-10-25 09:34:32.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262007 has a single transcript. 2021-10-25 09:34:32.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262008: ['FBtr0303832'] 2021-10-25 09:34:32.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262008 has a single transcript. 2021-10-25 09:34:32.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18534145, 18534219), (18534459, 18534517), (18534601, 18534660), (18534877, 18534939), (18535128, 18535184), (18535294, 18535360), (18535528, 18535585), (18535672, 18536813), (18536990, 18537165), (18537687, 18538029), (18538185, 18539522), (18539673, 18540628), (18540768, 18541184), (18541620, 18541856), (18542003, 18543261), (18543715, 18546524), (18543715, 18565376), (18547044, 18562823), (18547044, 18562709), (18547044, 18562882), (18565448, 18589057), (18565448, 18571242), (18589158, 18590312)] 2021-10-25 09:34:32.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3435662, 3435712)] 2021-10-25 09:34:32.668 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3434972, 3435807, 'FBtr0070532_exon_1') contains intron (3435662, 3435712) 2021-10-25 09:34:32.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070532_exon_1'] 2021-10-25 09:34:32.668 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18532727, 18534459, 'FBtr0112544_exon_17') contains intron (18534145, 18534219) 2021-10-25 09:34:32.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8889795, 8889858), (8891118, 8891249)] 2021-10-25 09:34:32.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.669 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18532727, 18534459, 'FBtr0112545_exon_17') contains intron (18534145, 18534219) 2021-10-25 09:34:32.669 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18532024, 18534459, 'FBtr0343830_exon_17') contains intron (18534145, 18534219) 2021-10-25 09:34:32.670 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18532727, 18534459, 'FBtr0343831_exon_18') contains intron (18534145, 18534219) 2021-10-25 09:34:32.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262009: ['FBtr0303834', 'FBtr0304566'] 2021-10-25 09:34:32.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112544_exon_17', 'FBtr0112545_exon_17', 'FBtr0343830_exon_17', 'FBtr0343831_exon_18'] 2021-10-25 09:34:32.670 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083542': ['FBtr0330050']} 2021-10-25 09:34:32.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.671 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330050']] 2021-10-25 09:34:32.676 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088686': ['FBtr0330246']} 2021-10-25 09:34:32.676 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330246']] 2021-10-25 09:34:32.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033339: ['FBtr0088642', 'FBtr0088643', 'FBtr0339302', 'FBtr0345224'] 2021-10-25 09:34:32.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24899796, 24899860), (24899799, 24899860), (24900157, 24900281), (24900486, 24903209), (24900522, 24903209), (24903424, 24905338), (24905476, 24905726), (24905476, 24905906)] 2021-10-25 09:34:32.712 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23373003, 23373056), (23373234, 23373300)] 2021-10-25 09:34:32.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20376601, 20378430), (20377839, 20378430), (20378648, 20378711), (20378815, 20378881), (20379079, 20379311), (20379848, 20379910), (20380169, 20380234), (20380348, 20380412), (20380499, 20380569), (20380653, 20380714), (20380957, 20381021), (20381292, 20381567), (20381292, 20381546), (20381721, 20381791)] 2021-10-25 09:34:32.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029659: ['FBtr0070531'] 2021-10-25 09:34:32.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029659 has a single transcript. 2021-10-25 09:34:32.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029660: ['FBtr0070526', 'FBtr0331606'] 2021-10-25 09:34:32.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0078185': ['FBtr0330157']} 2021-10-25 09:34:32.731 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330157']] 2021-10-25 09:34:32.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262010: ['FBtr0303835'] 2021-10-25 09:34:32.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262010 has a single transcript. 2021-10-25 09:34:32.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3461195, 3461246), (3461854, 3462047), (3461947, 3462047)] 2021-10-25 09:34:32.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262017: ['FBtr0303837'] 2021-10-25 09:34:32.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262017 has a single transcript. 2021-10-25 09:34:32.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036984: ['FBtr0078234'] 2021-10-25 09:34:32.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036984 has a single transcript. 2021-10-25 09:34:32.783 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8893737, 8893925), (8894141, 8894203), (8895167, 8895229), (8895473, 8895531), (8895644, 8895953), (8895644, 8895786), (8895644, 8895950), (8895843, 8895953), (8895843, 8895950), (8896053, 8896203), (8897630, 8897694), (8897802, 8897864), (8898173, 8898250), (8898322, 8898388)] 2021-10-25 09:34:32.784 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036985: ['FBtr0078191'] 2021-10-25 09:34:32.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036985 has a single transcript. 2021-10-25 09:34:32.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262018: ['FBtr0303836', 'FBtr0308770'] 2021-10-25 09:34:32.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036986: ['FBtr0078233'] 2021-10-25 09:34:32.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036986 has a single transcript. 2021-10-25 09:34:32.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036987: ['FBtr0078231', 'FBtr0078232'] 2021-10-25 09:34:32.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003502: ['FBtr0079615', 'FBtr0079616', 'FBtr0079617', 'FBtr0079618', 'FBtr0112835', 'FBtr0112836', 'FBtr0330692', 'FBtr0330693'] 2021-10-25 09:34:32.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029661: ['FBtr0070530', 'FBtr0310466'] 2021-10-25 09:34:32.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17788624, 17789082), (17789256, 17789334), (17789556, 17794472), (17794714, 17796752), (17796923, 17797347), (17799673, 17801696), (17802605, 17803076), (17803497, 17806367), (17806505, 17809237), (17809402, 17810822), (17810938, 17815573), (17815717, 17827420), (17827883, 17863936), (17827883, 17843533), (17864685, 17875227)] 2021-10-25 09:34:32.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040602: ['FBtr0084913'] 2021-10-25 09:34:32.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040602 has a single transcript. 2021-10-25 09:34:32.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20427418, 20427470), (20427585, 20427650)] 2021-10-25 09:34:32.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040606: ['FBtr0085025', 'FBtr0309031', 'FBtr0302899'] 2021-10-25 09:34:32.874 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3463827, 3463889), (3463827, 3463880)] 2021-10-25 09:34:32.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.875 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262020: ['FBtr0303850'] 2021-10-25 09:34:32.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262020 has a single transcript. 2021-10-25 09:34:32.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262021: ['FBtr0303851'] 2021-10-25 09:34:32.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262021 has a single transcript. 2021-10-25 09:34:32.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036988: ['FBtr0078230', 'FBtr0310615'] 2021-10-25 09:34:32.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085371: ['FBtr0344834', 'FBtr0344835'] 2021-10-25 09:34:32.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262022: ['FBtr0303852'] 2021-10-25 09:34:32.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262022 has a single transcript. 2021-10-25 09:34:32.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26425019, 26425076), (26425024, 26425076)] 2021-10-25 09:34:32.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26424697, 26425105, 'FBtr0085025_exon_1') contains intron (26425019, 26425076) 2021-10-25 09:34:32.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085025_exon_1'] 2021-10-25 09:34:32.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262023: ['FBtr0303853'] 2021-10-25 09:34:32.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262023 has a single transcript. 2021-10-25 09:34:32.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029662: ['FBtr0070527', 'FBtr0070528', 'FBtr0070529'] 2021-10-25 09:34:32.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033340: ['FBtr0088644'] 2021-10-25 09:34:32.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033340 has a single transcript. 2021-10-25 09:34:32.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262024: ['FBtr0303854'] 2021-10-25 09:34:32.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262024 has a single transcript. 2021-10-25 09:34:32.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033341: ['FBtr0088684'] 2021-10-25 09:34:32.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033341 has a single transcript. 2021-10-25 09:34:32.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262025: ['FBtr0303855', 'FBtr0303856'] 2021-10-25 09:34:32.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20429116, 20429168), (20429389, 20429515), (20430009, 20430312)] 2021-10-25 09:34:32.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033344: ['FBtr0088682'] 2021-10-25 09:34:32.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033344 has a single transcript. 2021-10-25 09:34:32.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5503693, 5503857), (5504121, 5504973), (5505093, 5505531), (5505675, 5506098), (5505675, 5507392), (5506288, 5507392), (5507549, 5507693), (5507792, 5508357), (5508477, 5509885), (5510014, 5510118), (5510477, 5510795)] 2021-10-25 09:34:32.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033347: ['FBtr0088678', 'FBtr0339308'] 2021-10-25 09:34:32.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:32.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3466207, 3466269), (3466335, 3466398), (3466632, 3471873), (3473371, 3474140), (3473371, 3474377)] 2021-10-25 09:34:32.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:32.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20139542, 20139623), (20139734, 20139848)] 2021-10-25 09:34:33.002 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20139623, 20139921, 'FBtr0303856_exon_1') contains intron (20139734, 20139848) 2021-10-25 09:34:33.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303856_exon_1'] 2021-10-25 09:34:33.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8260636, 8260697), (8260831, 8260908), (8261681, 8261739), (8261868, 8261942), (8262073, 8262138), (8262219, 8262284), (8262401, 8262474), (8262680, 8271935), (8262680, 8265194), (8262680, 8283408), (8272176, 8277370), (8272179, 8277370), (8283555, 8283868), (8284064, 8284124), (8284220, 8298070), (8284220, 8296440), (8298340, 8300505), (8298340, 8300817)] 2021-10-25 09:34:33.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036990: ['FBtr0078227'] 2021-10-25 09:34:33.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036990 has a single transcript. 2021-10-25 09:34:33.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8919463, 8919523), (8919466, 8919523)] 2021-10-25 09:34:33.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036991: ['FBtr0078194', 'FBtr0344821'] 2021-10-25 09:34:33.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085374: ['FBtr0112553'] 2021-10-25 09:34:33.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085374 has a single transcript. 2021-10-25 09:34:33.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040607: ['FBtr0303466'] 2021-10-25 09:34:33.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040607 has a single transcript. 2021-10-25 09:34:33.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085376: ['FBtr0290046', 'FBtr0334566'] 2021-10-25 09:34:33.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040608: ['FBtr0100441', 'FBtr0339239', 'FBtr0344267'] 2021-10-25 09:34:33.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262026: ['FBtr0303860'] 2021-10-25 09:34:33.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262026 has a single transcript. 2021-10-25 09:34:33.058 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20436469, 20436526), (20437112, 20437246), (20437112, 20437253), (20437875, 20437939)] 2021-10-25 09:34:33.059 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.059 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262027: ['FBtr0303863'] 2021-10-25 09:34:33.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262027 has a single transcript. 2021-10-25 09:34:33.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262028: ['FBtr0309032', 'FBtr0303861'] 2021-10-25 09:34:33.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033348: ['FBtr0290033'] 2021-10-25 09:34:33.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033348 has a single transcript. 2021-10-25 09:34:33.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31311663, 31311809), (31311931, 31340421), (31340581, 31351267), (31351372, 31351696), (31351821, 31353084), (31353182, 31353409), (31353618, 31354461), (31354614, 31355616), (31355783, 31357278), (31357533, 31358908), (31359364, 31359785), (31360184, 31360265), (31360550, 31360663), (31360550, 31360678), (31360801, 31360864), (31361011, 31361118), (31362358, 31366842), (31367522, 31370235)] 2021-10-25 09:34:33.084 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31311156, 31311931, 'FBtr0290046_exon_1') contains intron (31311663, 31311809) 2021-10-25 09:34:33.085 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290046_exon_1'] 2021-10-25 09:34:33.085 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033349: ['FBtr0088652'] 2021-10-25 09:34:33.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033349 has a single transcript. 2021-10-25 09:34:33.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029663: ['FBtr0070591', 'FBtr0070592', 'FBtr0114487', 'FBtr0344077'] 2021-10-25 09:34:33.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033350: ['FBtr0088653'] 2021-10-25 09:34:33.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033350 has a single transcript. 2021-10-25 09:34:33.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26727379, 26729766), (26727714, 26729766), (26727918, 26729766)] 2021-10-25 09:34:33.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.099 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033351: ['FBtr0088676'] 2021-10-25 09:34:33.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033351 has a single transcript. 2021-10-25 09:34:33.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16005672, 16006996), (16005672, 16006403)] 2021-10-25 09:34:33.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033352: ['FBtr0088654', 'FBtr0339303'] 2021-10-25 09:34:33.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036992: ['FBtr0078225', 'FBtr0078226'] 2021-10-25 09:34:33.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8928354, 8928457), (8928648, 8928708), (8928878, 8928935), (8930197, 8930258), (8930380, 8930433), (8930533, 8930590), (8930647, 8930709), (8930650, 8930709), (8931005, 8931069), (8931266, 8931330), (8931693, 8931754), (8931953, 8932014), (8932226, 8932290), (8932512, 8932570), (8932680, 8932742)] 2021-10-25 09:34:33.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085377: ['FBtr0112557'] 2021-10-25 09:34:33.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085377 has a single transcript. 2021-10-25 09:34:33.159 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20438300, 20438364), (20439018, 20439076), (20439460, 20439527), (20439554, 20439771)] 2021-10-25 09:34:33.160 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20439527, 20439872, 'FBtr0078226_exon_1') contains intron (20439554, 20439771) 2021-10-25 09:34:33.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078226_exon_1'] 2021-10-25 09:34:33.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085380: ['FBtr0112561', 'FBtr0329978'] 2021-10-25 09:34:33.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262029: ['FBtr0303923', 'FBtr0303924'] 2021-10-25 09:34:33.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3478549, 3478610), (3479032, 3479127), (3479331, 3479391), (3480349, 3480421), (3480729, 3480858), (3480935, 3482025), (3481344, 3482025)] 2021-10-25 09:34:33.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3479127, 3480349, 'FBtr0070591_exon_4') contains intron (3479331, 3479391) 2021-10-25 09:34:33.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070591_exon_4'] 2021-10-25 09:34:33.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040609: ['FBtr0085172', 'FBtr0347561'] 2021-10-25 09:34:33.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8467133, 8476251), (8476709, 8476805), (8477023, 8483129), (8479724, 8483129), (8483416, 8483565), (8484153, 8484809), (8485514, 8486021), (8487681, 8487744), (8487902, 8487969)] 2021-10-25 09:34:33.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4694991, 4705477), (4705823, 4712288), (4712455, 4717724), (4717861, 4719804), (4719981, 4720340)] 2021-10-25 09:34:33.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033353: ['FBtr0300706'] 2021-10-25 09:34:33.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033353 has a single transcript. 2021-10-25 09:34:33.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036993: ['FBtr0078195', 'FBtr0300411'] 2021-10-25 09:34:33.225 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0112561': ['FBtr0329978']} 2021-10-25 09:34:33.226 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329978']] 2021-10-25 09:34:33.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033354: ['FBtr0088675'] 2021-10-25 09:34:33.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033354 has a single transcript. 2021-10-25 09:34:33.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085382: ['FBtr0112563', 'FBtr0305292', 'FBtr0339321'] 2021-10-25 09:34:33.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033355: ['FBtr0088656'] 2021-10-25 09:34:33.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033355 has a single transcript. 2021-10-25 09:34:33.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27291993, 27292125), (27292011, 27292125)] 2021-10-25 09:34:33.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033356: ['FBtr0290278', 'FBtr0290279'] 2021-10-25 09:34:33.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20442469, 20445947), (20445293, 20445947), (20446401, 20446745), (20446819, 20446879), (20446922, 20449509), (20449635, 20450265)] 2021-10-25 09:34:33.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8948941, 8949845), (8950791, 8950910)] 2021-10-25 09:34:33.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27770108, 27778521), (27770108, 27770816), (27770861, 27778521), (27778580, 27778911), (27779295, 27781399), (27781629, 27787330), (27787428, 27788240), (27788372, 27788971), (27789112, 27797383), (27797584, 27804324), (27804438, 27833896), (27834457, 27885590), (27885658, 27904970)] 2021-10-25 09:34:33.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003507: ['FBtr0083216', 'FBtr0083215', 'FBtr0100595', 'FBtr0306244', 'FBtr0335423', 'FBtr0335424'] 2021-10-25 09:34:33.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040623: ['FBtr0085435'] 2021-10-25 09:34:33.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040623 has a single transcript. 2021-10-25 09:34:33.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036994: ['FBtr0078224', 'FBtr0331571'] 2021-10-25 09:34:33.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040628: ['FBtr0344064', 'FBtr0344065', 'FBtr0305335'] 2021-10-25 09:34:33.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029664: ['FBtr0070568', 'FBtr0331609'] 2021-10-25 09:34:33.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20451257, 20451874), (20452599, 20452672), (20452599, 20452676)] 2021-10-25 09:34:33.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033357: ['FBtr0088657', 'FBtr0339306'] 2021-10-25 09:34:33.374 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31260473, 31260669), (31260764, 31260829), (31260920, 31260981), (31261229, 31261301), (31261238, 31261301), (31261244, 31261301)] 2021-10-25 09:34:33.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3483083, 3483145), (3483483, 3483555), (3483912, 3483969)] 2021-10-25 09:34:33.377 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3483145, 3483912, 'FBtr0070568_exon_2') contains intron (3483483, 3483555) 2021-10-25 09:34:33.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070568_exon_2'] 2021-10-25 09:34:33.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085383: ['FBtr0344296', 'FBtr0304916', 'FBtr0304917', 'FBtr0346762'] 2021-10-25 09:34:33.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8951892, 8952001)] 2021-10-25 09:34:33.411 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036995: ['FBtr0078223', 'FBtr0331569', 'FBtr0331570'] 2021-10-25 09:34:33.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262030: ['FBtr0333432', 'FBtr0303925'] 2021-10-25 09:34:33.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15986787, 15993119), (15992502, 15993119), (15993450, 15999325), (15995724, 15999325), (15999773, 15999845), (16000059, 16001188), (16000059, 16000612), (16000785, 16001751), (16001406, 16001751), (16001916, 16002169), (16002323, 16002870), (16002323, 16002406)] 2021-10-25 09:34:33.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029665: ['FBtr0070590'] 2021-10-25 09:34:33.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029665 has a single transcript. 2021-10-25 09:34:33.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029666: ['FBtr0070569', 'FBtr0331610', 'FBtr0331611', 'FBtr0331612', 'FBtr0332285'] 2021-10-25 09:34:33.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033358: ['FBtr0088671'] 2021-10-25 09:34:33.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033358 has a single transcript. 2021-10-25 09:34:33.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2003662, 2005118)] 2021-10-25 09:34:33.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040629: ['FBtr0305336'] 2021-10-25 09:34:33.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040629 has a single transcript. 2021-10-25 09:34:33.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033359: ['FBtr0273384', 'FBtr0273385', 'FBtr0339307'] 2021-10-25 09:34:33.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040634: ['FBtr0078246', 'FBtr0345810'] 2021-10-25 09:34:33.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20456628, 20456683), (20456807, 20456869), (20459369, 20459428), (20459621, 20464033), (20459621, 20464745)] 2021-10-25 09:34:33.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28146927, 28147499), (28146968, 28147677), (28146968, 28147499), (28148251, 28202167), (28202255, 28226732), (28226808, 28235074), (28235177, 28235260), (28235453, 28237030), (28237375, 28237506), (28237675, 28237732)] 2021-10-25 09:34:33.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.531 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0344296': ['FBtr0346762']} 2021-10-25 09:34:33.532 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346762']] 2021-10-25 09:34:33.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20769685, 20769738), (20769837, 20769893)] 2021-10-25 09:34:33.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262031: ['FBtr0303926'] 2021-10-25 09:34:33.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262031 has a single transcript. 2021-10-25 09:34:33.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262033: ['FBtr0342852'] 2021-10-25 09:34:33.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262033 has a single transcript. 2021-10-25 09:34:33.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262035: ['FBtr0303931'] 2021-10-25 09:34:33.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262035 has a single transcript. 2021-10-25 09:34:33.568 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8970182, 8970243), (8970363, 8970427), (8970543, 8970611), (8970796, 8970864), (8971051, 8971424), (8971108, 8971424), (8971249, 8971424), (8975444, 8984926)] 2021-10-25 09:34:33.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.569 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262036: ['FBtr0303932'] 2021-10-25 09:34:33.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262036 has a single transcript. 2021-10-25 09:34:33.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3486021, 3486082), (3486021, 3486312), (3486021, 3486318), (3486178, 3486312), (3486184, 3486312), (3487343, 3487403), (3487530, 3487596), (3487787, 3487840), (3488022, 3488074)] 2021-10-25 09:34:33.577 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3486312, 3487530, 'FBtr0070569_exon_2') contains intron (3487343, 3487403) 2021-10-25 09:34:33.577 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3486312, 3487530, 'FBtr0331610_exon_3') contains intron (3487343, 3487403) 2021-10-25 09:34:33.578 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3486312, 3487530, 'FBtr0331611_exon_3') contains intron (3487343, 3487403) 2021-10-25 09:34:33.578 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3486318, 3487530, 'FBtr0331612_exon_2') contains intron (3487343, 3487403) 2021-10-25 09:34:33.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070569_exon_2', 'FBtr0331610_exon_3', 'FBtr0331611_exon_3', 'FBtr0331612_exon_2'] 2021-10-25 09:34:33.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262057: ['FBtr0074841', 'FBtr0074842', 'FBtr0345816'] 2021-10-25 09:34:33.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040636: ['FBtr0078263', 'FBtr0331527'] 2021-10-25 09:34:33.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036996: ['FBtr0078196'] 2021-10-25 09:34:33.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036996 has a single transcript. 2021-10-25 09:34:33.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036997: ['FBtr0078197'] 2021-10-25 09:34:33.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036997 has a single transcript. 2021-10-25 09:34:33.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036998: ['FBtr0078198'] 2021-10-25 09:34:33.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0036998 has a single transcript. 2021-10-25 09:34:33.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085384: ['FBtr0347562', 'FBtr0306735', 'FBtr0273215', 'FBtr0345324'] 2021-10-25 09:34:33.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:33.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0036999: ['FBtr0078199', 'FBtr0078200'] 2021-10-25 09:34:33.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20317416, 20317478), (20317788, 20318383), (20318813, 20318870), (20319141, 20319197), (20319566, 20319624)] 2021-10-25 09:34:33.645 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20317189, 20317788, 'FBtr0074841_exon_1') contains intron (20317416, 20317478) 2021-10-25 09:34:33.646 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20317189, 20317788, 'FBtr0345816_exon_1') contains intron (20317416, 20317478) 2021-10-25 09:34:33.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074841_exon_1', 'FBtr0345816_exon_1'] 2021-10-25 09:34:33.646 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033362: ['FBtr0301191', 'FBtr0301192', 'FBtr0301193', 'FBtr0339289'] 2021-10-25 09:34:33.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20474643, 20475564), (20475497, 20475564)] 2021-10-25 09:34:33.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003510: ['FBtr0085557', 'FBtr0346862'] 2021-10-25 09:34:33.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040637: ['FBtr0078265'] 2021-10-25 09:34:33.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040637 has a single transcript. 2021-10-25 09:34:33.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040648: ['FBtr0077240'] 2021-10-25 09:34:33.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040648 has a single transcript. 2021-10-25 09:34:33.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040649: ['FBtr0077311'] 2021-10-25 09:34:33.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040649 has a single transcript. 2021-10-25 09:34:33.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040650: ['FBtr0077323', 'FBtr0340402'] 2021-10-25 09:34:33.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23803965, 23820519), (23821746, 23829959), (23821746, 23829956), (23830033, 23830177), (23830329, 23845350), (23845462, 23847010), (23847144, 23847211), (23847296, 23847352), (23847553, 23847679), (23847553, 23847785), (23847700, 23847785), (23848110, 23848170), (23848385, 23848446), (23848718, 23848778), (23848909, 23848965), (23849129, 23849187), (23851112, 23858726)] 2021-10-25 09:34:33.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30039885, 30039938)] 2021-10-25 09:34:33.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262081: ['FBtr0299728', 'FBtr0300548', 'FBtr0299729', 'FBtr0300546', 'FBtr0300547', 'FBtr0300549', 'FBtr0335449'] 2021-10-25 09:34:33.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9007786, 9007870), (9008249, 9008317), (9008495, 9008702), (9008495, 9011236), (9009224, 9011236), (9011416, 9011512), (9011416, 9013018)] 2021-10-25 09:34:33.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037000: ['FBtr0078220', 'FBtr0078221'] 2021-10-25 09:34:33.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20426499, 20426554), (20426907, 20426964)] 2021-10-25 09:34:33.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029667: ['FBtr0070589', 'FBtr0343540', 'FBtr0344969'] 2021-10-25 09:34:33.795 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20485424, 20485488), (20486194, 20488132), (20488322, 20493241), (20488322, 20494662)] 2021-10-25 09:34:33.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003511: ['FBtr0085556', 'FBtr0346861'] 2021-10-25 09:34:33.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040651: ['FBtr0077328'] 2021-10-25 09:34:33.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040651 has a single transcript. 2021-10-25 09:34:33.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040653: ['FBtr0071559', 'FBtr0345819'] 2021-10-25 09:34:33.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30039885, 30039938)] 2021-10-25 09:34:33.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3492437, 3492512), (3492816, 3492883), (3493048, 3493136), (3493048, 3503388), (3503431, 3504538)] 2021-10-25 09:34:33.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037001: ['FBtr0078201', 'FBtr0331564'] 2021-10-25 09:34:33.871 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20869122, 20869181)] 2021-10-25 09:34:33.872 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.872 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085385: ['FBtr0331577', 'FBtr0331578', 'FBtr0331579'] 2021-10-25 09:34:33.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003512: ['FBtr0085558'] 2021-10-25 09:34:33.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003512 has a single transcript. 2021-10-25 09:34:33.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20492214, 20495351), (20495519, 20495624), (20496075, 20496157), (20496523, 20496591)] 2021-10-25 09:34:33.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11634996, 11635057), (11635144, 11635215), (11635411, 11635468), (11635630, 11635700), (11635969, 11636024), (11636244, 11636301), (11637005, 11637069), (11637614, 11637840), (11637614, 11642275), (11637614, 11646787), (11637614, 11650084), (11637614, 11637834), (11643205, 11646715)] 2021-10-25 09:34:33.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003513: ['FBtr0083318', 'FBtr0306026', 'FBtr0306027'] 2021-10-25 09:34:33.909 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11637069, 11637884, 'FBtr0300549_exon_1') contains intron (11637614, 11637840) 2021-10-25 09:34:33.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300549_exon_1'] 2021-10-25 09:34:33.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033363: ['FBtr0088666'] 2021-10-25 09:34:33.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033363 has a single transcript. 2021-10-25 09:34:33.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033364: ['FBtr0088660'] 2021-10-25 09:34:33.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033364 has a single transcript. 2021-10-25 09:34:33.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040658: ['FBtr0100554', 'FBtr0343011'] 2021-10-25 09:34:33.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033365: ['FBtr0088665', 'FBtr0110892'] 2021-10-25 09:34:33.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029669: ['FBtr0070570', 'FBtr0070571'] 2021-10-25 09:34:33.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037003: ['FBtr0078206'] 2021-10-25 09:34:33.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037003 has a single transcript. 2021-10-25 09:34:33.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9908206, 9928246), (9908206, 9944476), (9927654, 9928246), (9928300, 9944476), (9945502, 9945897), (9946023, 9946135), (9946234, 9948203), (9948359, 9948445), (9948566, 9948655), (9948751, 9948988), (9949134, 9949591), (9949722, 9952186), (9952301, 9952673), (9952819, 9953766), (9953920, 9954317), (9954494, 9954555), (9954628, 9955380), (9955517, 9955590), (9955804, 9957686), (9957940, 9961636), (9957940, 9958789), (9958849, 9961636), (9961786, 9964891)] 2021-10-25 09:34:33.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037004: ['FBtr0078207'] 2021-10-25 09:34:33.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037004 has a single transcript. 2021-10-25 09:34:33.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037005: ['FBtr0078208'] 2021-10-25 09:34:33.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037005 has a single transcript. 2021-10-25 09:34:33.978 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9019548, 9019605), (9019899, 9020033), (9020287, 9020353), (9020465, 9021255), (9020465, 9021727), (9021486, 9021727), (9021858, 9021962), (9024069, 9030232), (9030319, 9030891), (9030319, 9030875)] 2021-10-25 09:34:33.978 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16376075, 16376366), (16377083, 16377184), (16377083, 16377193), (16378014, 16378080), (16378585, 16379708), (16379798, 16383982), (16384107, 16390713), (16390904, 16401839), (16402322, 16403417), (16402344, 16403417), (16402344, 16403395)] 2021-10-25 09:34:33.978 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16374433, 16377083, 'FBtr0083318_exon_8') contains intron (16376075, 16376366) 2021-10-25 09:34:33.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.979 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083318_exon_8'] 2021-10-25 09:34:33.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.979 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22669855, 22669923), (22670053, 22670144)] 2021-10-25 09:34:33.980 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.980 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3514336, 3514389), (3514459, 3515251)] 2021-10-25 09:34:33.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:33.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:33.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037007: ['FBtr0078216', 'FBtr0078217', 'FBtr0078218', 'FBtr0078219', 'FBtr0331567'] 2021-10-25 09:34:34.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033366: ['FBtr0088664', 'FBtr0339288'] 2021-10-25 09:34:34.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040660: ['FBtr0072033', 'FBtr0072034'] 2021-10-25 09:34:34.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029672: ['FBtr0070586', 'FBtr0070587', 'FBtr0333793'] 2021-10-25 09:34:34.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085386: ['FBtr0112568', 'FBtr0303867', 'FBtr0335239'] 2021-10-25 09:34:34.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9039801, 9039858), (9040037, 9040095), (9040218, 9040272), (9040490, 9040554), (9041811, 9042045), (9041811, 9041871), (9041931, 9042045)] 2021-10-25 09:34:34.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003514: ['FBtr0070877', 'FBtr0339502', 'FBtr0339503', 'FBtr0339504', 'FBtr0345294'] 2021-10-25 09:34:34.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23378177, 23382614), (23382759, 23383047), (23383122, 23383319), (23383122, 23383364)] 2021-10-25 09:34:34.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20515383, 20515443), (20515623, 20515724), (20515786, 20515860), (20516132, 20518967), (20516132, 20519216), (20516132, 20517260), (20516132, 20517061), (20516132, 20516698)] 2021-10-25 09:34:34.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3571939, 3572002), (3572532, 3572594), (3573300, 3573367), (3573303, 3573367)] 2021-10-25 09:34:34.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040666: ['FBtr0072437', 'FBtr0310371'] 2021-10-25 09:34:34.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033367: ['FBtr0088663'] 2021-10-25 09:34:34.137 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033367 has a single transcript. 2021-10-25 09:34:34.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4494547, 4494608), (4494620, 4494934), (4495112, 4495173), (4495438, 4495689), (4495882, 4495955), (4496132, 4496475), (4497467, 4497557), (4497648, 4502438), (4503231, 4503614), (4503725, 4522987), (4515119, 4522987), (4523087, 4534148), (4534525, 4537804), (4538689, 4556695), (4557006, 4557941)] 2021-10-25 09:34:34.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033368: ['FBtr0088662', 'FBtr0308823', 'FBtr0339287'] 2021-10-25 09:34:34.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24762972, 24763032), (24762981, 24763032)] 2021-10-25 09:34:34.178 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6223511, 6223584), (6224116, 6224410), (6224116, 6224696), (6224116, 6225006), (6224116, 6225002)] 2021-10-25 09:34:34.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.182 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262097: ['FBtr0342943', 'FBtr0342944'] 2021-10-25 09:34:34.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029676: ['FBtr0070598', 'FBtr0070597', 'FBtr0333764'] 2021-10-25 09:34:34.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9046748, 9047657), (9047849, 9047913), (9048026, 9049879), (9048026, 9048175), (9048337, 9048466), (9048537, 9049879), (9050132, 9050514), (9050629, 9050842), (9051151, 9059254), (9051151, 9056572), (9056632, 9059254), (9059548, 9060588), (9059548, 9059852)] 2021-10-25 09:34:34.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5380332, 5380392)] 2021-10-25 09:34:34.231 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5379094, 5381074, 'FBtr0342944_exon_1') contains intron (5380332, 5380392) 2021-10-25 09:34:34.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0342944_exon_1'] 2021-10-25 09:34:34.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040670: ['FBtr0081562', 'FBtr0344948'] 2021-10-25 09:34:34.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037008: ['FBtr0078215'] 2021-10-25 09:34:34.262 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037008 has a single transcript. 2021-10-25 09:34:34.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085387: ['FBtr0342859', 'FBtr0112569', 'FBtr0112570', 'FBtr0112571', 'FBtr0112572', 'FBtr0114645', 'FBtr0309369', 'FBtr0309370'] 2021-10-25 09:34:34.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3790070, 3790129), (3790076, 3790129), (3790336, 3790416), (3790538, 3790755), (3791402, 3791476)] 2021-10-25 09:34:34.269 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3790041, 3790336, 'FBtr0070597_exon_1') contains intron (3790070, 3790129) 2021-10-25 09:34:34.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070597_exon_1'] 2021-10-25 09:34:34.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037009: ['FBtr0078209'] 2021-10-25 09:34:34.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037009 has a single transcript. 2021-10-25 09:34:34.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7094200, 7094262), (7094401, 7094470)] 2021-10-25 09:34:34.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037010: ['FBtr0078214', 'FBtr0331566'] 2021-10-25 09:34:34.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262098: ['FBtr0344579'] 2021-10-25 09:34:34.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262098 has a single transcript. 2021-10-25 09:34:34.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262099: ['FBtr0304017'] 2021-10-25 09:34:34.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262099 has a single transcript. 2021-10-25 09:34:34.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262100: ['FBtr0304019'] 2021-10-25 09:34:34.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262100 has a single transcript. 2021-10-25 09:34:34.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033369: ['FBtr0088661', 'FBtr0339286'] 2021-10-25 09:34:34.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040674: ['FBtr0086210', 'FBtr0336662'] 2021-10-25 09:34:34.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20522681, 20523202), (20523281, 20523351), (20523284, 20523351), (20523562, 20523629), (20524195, 20524254), (20524513, 20525485)] 2021-10-25 09:34:34.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262101: ['FBtr0304020'] 2021-10-25 09:34:34.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262101 has a single transcript. 2021-10-25 09:34:34.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262102: ['FBtr0304023'] 2021-10-25 09:34:34.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262102 has a single transcript. 2021-10-25 09:34:34.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003515: ['FBtr0075391'] 2021-10-25 09:34:34.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003515 has a single transcript. 2021-10-25 09:34:34.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029679: ['FBtr0070605'] 2021-10-25 09:34:34.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029679 has a single transcript. 2021-10-25 09:34:34.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262103: ['FBtr0304024', 'FBtr0304025', 'FBtr0304026', 'FBtr0340388', 'FBtr0344258', 'FBtr0344259'] 2021-10-25 09:34:34.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:34.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9061365, 9061439)] 2021-10-25 09:34:34.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003517: ['FBtr0070289', 'FBtr0070290', 'FBtr0339593', 'FBtr0339594'] 2021-10-25 09:34:34.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029681: ['FBtr0070612'] 2021-10-25 09:34:34.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029681 has a single transcript. 2021-10-25 09:34:34.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037011: ['FBtr0078210'] 2021-10-25 09:34:34.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037011 has a single transcript. 2021-10-25 09:34:34.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037012: ['FBtr0078213'] 2021-10-25 09:34:34.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037012 has a single transcript. 2021-10-25 09:34:34.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029685: ['FBtr0070627', 'FBtr0332387', 'FBtr0345712'] 2021-10-25 09:34:34.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037013: ['FBtr0078211', 'FBtr0331565'] 2021-10-25 09:34:34.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040679: ['FBtr0078657'] 2021-10-25 09:34:34.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040679 has a single transcript. 2021-10-25 09:34:34.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033371: ['FBtr0300173'] 2021-10-25 09:34:34.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033371 has a single transcript. 2021-10-25 09:34:34.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20533792, 20534197), (20534533, 20535176)] 2021-10-25 09:34:34.427 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040682: ['FBtr0305000', 'FBtr0334908', 'FBtr0346146'] 2021-10-25 09:34:34.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033372: ['FBtr0300369', 'FBtr0310147', 'FBtr0310148', 'FBtr0339285'] 2021-10-25 09:34:34.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3935179, 3935259), (3935356, 3935729), (3936281, 3936383)] 2021-10-25 09:34:34.449 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20772773, 20773151), (20773330, 20773390), (20773557, 20775497), (20775562, 20776093), (20776248, 20784267), (20776248, 20792354), (20776248, 20777069), (20777571, 20784267), (20785090, 20787772), (20792544, 20792604), (20792738, 20805826), (20792738, 20803312), (20804208, 20805826), (20805983, 20828434), (20805983, 20825987), (20829297, 20916834), (20916951, 20926961), (20917473, 20923297), (20923613, 20924977)] 2021-10-25 09:34:34.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1482480, 1482672), (1482915, 1483131), (1482915, 1483110), (1482915, 1483257)] 2021-10-25 09:34:34.452 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037014: ['FBtr0078243'] 2021-10-25 09:34:34.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037014 has a single transcript. 2021-10-25 09:34:34.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037015: ['FBtr0113182', 'FBtr0113183', 'FBtr0305579'] 2021-10-25 09:34:34.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:34.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.511 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18688368, 18692040), (18688550, 18692040), (18688567, 18692495), (18688648, 18692040), (18692862, 18699304), (18699640, 18699703), (18699959, 18700018), (18700611, 18700669), (18700952, 18701017), (18701261, 18701318), (18701485, 18702518), (18701485, 18701920), (18701485, 18702527), (18702187, 18702518), (18702187, 18702527), (18702683, 18702776), (18703879, 18703991)] 2021-10-25 09:34:34.513 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.513 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.530 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9085301, 9085363), (9085664, 9085720), (9085820, 9085944), (9085853, 9085944), (9085892, 9085944), (9086092, 9086214), (9086326, 9086389), (9086326, 9086377), (9086532, 9086592), (9086813, 9086913), (9087020, 9087086), (9087250, 9087305), (9087570, 9087630)] 2021-10-25 09:34:34.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20713300, 20713483), (20713611, 20713680), (20713877, 20715552), (20715683, 20716798), (20717310, 20719009), (20717310, 20718993)] 2021-10-25 09:34:34.549 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20715552, 20717310, 'FBtr0113182_exon_2') contains intron (20715683, 20716798) 2021-10-25 09:34:34.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113182_exon_2'] 2021-10-25 09:34:34.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029686: ['FBtr0070613', 'FBtr0345711'] 2021-10-25 09:34:34.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3936939, 3936992), (3939155, 3939214)] 2021-10-25 09:34:34.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040684: ['FBtr0078843', 'FBtr0339316', 'FBtr0339317'] 2021-10-25 09:34:34.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003520: ['FBtr0086783', 'FBtr0086784', 'FBtr0301614'] 2021-10-25 09:34:34.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037016: ['FBtr0078245'] 2021-10-25 09:34:34.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037016 has a single transcript. 2021-10-25 09:34:34.648 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18119963, 18120023), (18120400, 18120466), (18120403, 18120466), (18120664, 18120727), (18122862, 18124693), (18122862, 18123744), (18124927, 18125554)] 2021-10-25 09:34:34.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029687: ['FBtr0070616', 'FBtr0070617', 'FBtr0070618', 'FBtr0342739'] 2021-10-25 09:34:34.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5137494, 5137613), (5137494, 5137540)] 2021-10-25 09:34:34.654 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5137056, 5137573, 'FBtr0078843_exon_1') contains intron (5137494, 5137540) 2021-10-25 09:34:34.654 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078843_exon_1'] 2021-10-25 09:34:34.654 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037017: ['FBtr0078280', 'FBtr0345811'] 2021-10-25 09:34:34.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033373: ['FBtr0088633', 'FBtr0310143', 'FBtr0310144', 'FBtr0310145', 'FBtr0310146'] 2021-10-25 09:34:34.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20768528, 20768592), (20769361, 20769416)] 2021-10-25 09:34:34.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3949372, 3949480), (3949713, 3951414), (3951567, 3951635), (3951745, 3951828), (3951900, 3952002), (3952041, 3952107), (3952221, 3952766)] 2021-10-25 09:34:34.728 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3951828, 3952041, 'FBtr0070616_exon_5') contains intron (3951900, 3952002) 2021-10-25 09:34:34.728 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3951828, 3952041, 'FBtr0070618_exon_5') contains intron (3951900, 3952002) 2021-10-25 09:34:34.728 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3951828, 3952041, 'FBtr0342739_exon_5') contains intron (3951900, 3952002) 2021-10-25 09:34:34.729 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070616_exon_5', 'FBtr0070618_exon_5', 'FBtr0342739_exon_5'] 2021-10-25 09:34:34.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262104: ['FBtr0304028'] 2021-10-25 09:34:34.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262104 has a single transcript. 2021-10-25 09:34:34.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040687: ['FBtr0078908'] 2021-10-25 09:34:34.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040687 has a single transcript. 2021-10-25 09:34:34.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003525: ['FBtr0085397', 'FBtr0334867'] 2021-10-25 09:34:34.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262105: ['FBtr0304027'] 2021-10-25 09:34:34.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262105 has a single transcript. 2021-10-25 09:34:34.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037018: ['FBtr0078279', 'FBtr0321286'] 2021-10-25 09:34:34.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040688: ['FBtr0072540'] 2021-10-25 09:34:34.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040688 has a single transcript. 2021-10-25 09:34:34.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262106: ['FBtr0309033', 'FBtr0304029', 'FBtr0335160'] 2021-10-25 09:34:34.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040694: ['FBtr0073140', 'FBtr0346813'] 2021-10-25 09:34:34.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20771058, 20771433)] 2021-10-25 09:34:34.798 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9090021, 9090082), (9090485, 9090542), (9090749, 9090810), (9091036, 9091406), (9091039, 9091406), (9091051, 9091406), (9091653, 9092431), (9091653, 9091729), (9091770, 9092431)] 2021-10-25 09:34:34.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29253961, 29254872)] 2021-10-25 09:34:34.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085390: ['FBtr0112579', 'FBtr0112580', 'FBtr0112581', 'FBtr0330238', 'FBtr0308589', 'FBtr0308590', 'FBtr0346954'] 2021-10-25 09:34:34.814 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3620691, 3620741), (3620809, 3620871), (3620812, 3620871)] 2021-10-25 09:34:34.814 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2245494, 2245544), (2245494, 2245550)] 2021-10-25 09:34:34.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037019: ['FBtr0078278'] 2021-10-25 09:34:34.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037019 has a single transcript. 2021-10-25 09:34:34.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003527: ['FBtr0087825'] 2021-10-25 09:34:34.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003527 has a single transcript. 2021-10-25 09:34:34.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037020: ['FBtr0078251'] 2021-10-25 09:34:34.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037020 has a single transcript. 2021-10-25 09:34:34.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040696: ['FBtr0073218'] 2021-10-25 09:34:34.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040696 has a single transcript. 2021-10-25 09:34:34.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037021: ['FBtr0078277'] 2021-10-25 09:34:34.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037021 has a single transcript. 2021-10-25 09:34:34.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029688: ['FBtr0070626', 'FBtr0342740'] 2021-10-25 09:34:34.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003545: ['FBtr0086881', 'FBtr0340277'] 2021-10-25 09:34:34.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040697: ['FBtr0073257'] 2021-10-25 09:34:34.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040697 has a single transcript. 2021-10-25 09:34:34.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037022: ['FBtr0078276'] 2021-10-25 09:34:34.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037022 has a single transcript. 2021-10-25 09:34:34.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040699: ['FBtr0290214'] 2021-10-25 09:34:34.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040699 has a single transcript. 2021-10-25 09:34:34.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037023: ['FBtr0078273'] 2021-10-25 09:34:34.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037023 has a single transcript. 2021-10-25 09:34:34.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040705: ['FBtr0077440'] 2021-10-25 09:34:34.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040705 has a single transcript. 2021-10-25 09:34:34.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040715: ['FBtr0077842'] 2021-10-25 09:34:34.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040715 has a single transcript. 2021-10-25 09:34:34.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037024: ['FBtr0078252', 'FBtr0078253', 'FBtr0078254'] 2021-10-25 09:34:34.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040717: ['FBtr0077817', 'FBtr0334759'] 2021-10-25 09:34:34.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17746119, 17746177), (17747376, 17747437)] 2021-10-25 09:34:34.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3955972, 3956048), (3956245, 3956306), (3956427, 3956512), (3960410, 3960476), (3960584, 3960641), (3964352, 3964416), (3964497, 3964566), (3964638, 3964700), (3964951, 3965271)] 2021-10-25 09:34:34.922 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3964700, 3965327, 'FBtr0070626_exon_1') contains intron (3964951, 3965271) 2021-10-25 09:34:34.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070626_exon_1'] 2021-10-25 09:34:34.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262107: ['FBtr0309034', 'FBtr0304032', 'FBtr0304033'] 2021-10-25 09:34:34.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2008541, 2008672)] 2021-10-25 09:34:34.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20798718, 20799142), (20798859, 20799142), (20798988, 20799142)] 2021-10-25 09:34:34.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7836912, 7836980), (7837162, 7837245), (7837474, 7837587), (7837743, 7843012), (7843915, 7844544), (7844756, 7844885), (7844972, 7845033), (7845199, 7846755), (7845199, 7845738), (7845223, 7845738), (7845870, 7846755), (7845870, 7847431), (7847643, 7848272), (7848404, 7848889), (7848998, 7850718), (7850843, 7850926), (7851052, 7853405), (7851052, 7852265), (7852346, 7853405), (7852346, 7854521), (7853591, 7854159), (7854363, 7854521), (7854720, 7859162), (7859245, 7860991), (7861075, 7881810), (7881920, 7885519)] 2021-10-25 09:34:34.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:34.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:34.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029689: ['FBtr0070625'] 2021-10-25 09:34:34.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029689 has a single transcript. 2021-10-25 09:34:34.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029690: ['FBtr0070624', 'FBtr0445312'] 2021-10-25 09:34:34.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003557: ['FBtr0077824', 'FBtr0077822', 'FBtr0077823', 'FBtr0334778', 'FBtr0339529'] 2021-10-25 09:34:34.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033374: ['FBtr0088632'] 2021-10-25 09:34:34.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033374 has a single transcript. 2021-10-25 09:34:34.995 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330238': ['FBtr0346954']} 2021-10-25 09:34:34.996 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346954']] 2021-10-25 09:34:35.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033375: ['FBtr0088631'] 2021-10-25 09:34:35.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033375 has a single transcript. 2021-10-25 09:34:35.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040718: ['FBtr0077863'] 2021-10-25 09:34:35.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040718 has a single transcript. 2021-10-25 09:34:35.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2088298, 2089065), (2089139, 2089195)] 2021-10-25 09:34:35.006 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2089065, 2089626, 'FBtr0309034_exon_2') contains intron (2089139, 2089195) 2021-10-25 09:34:35.006 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2088252, 2089139, 'FBtr0304032_exon_1') contains intron (2088298, 2089065) 2021-10-25 09:34:35.006 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2088252, 2089626, 'FBtr0304033_exon_1') contains intron (2088298, 2089065) 2021-10-25 09:34:35.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309034_exon_2', 'FBtr0304032_exon_1', 'FBtr0304033_exon_1'] 2021-10-25 09:34:35.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033376: ['FBtr0088565'] 2021-10-25 09:34:35.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033376 has a single transcript. 2021-10-25 09:34:35.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040719: ['FBtr0077871', 'FBtr0333008'] 2021-10-25 09:34:35.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033377: ['FBtr0088630'] 2021-10-25 09:34:35.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033377 has a single transcript. 2021-10-25 09:34:35.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033378: ['FBtr0088567'] 2021-10-25 09:34:35.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033378 has a single transcript. 2021-10-25 09:34:35.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3969289, 3969350), (3969643, 3969729), (3970077, 3970412)] 2021-10-25 09:34:35.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033379: ['FBtr0088628'] 2021-10-25 09:34:35.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033379 has a single transcript. 2021-10-25 09:34:35.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033380: ['FBtr0088568', 'FBtr0088569'] 2021-10-25 09:34:35.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:35.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037025: ['FBtr0078255', 'FBtr0321284'] 2021-10-25 09:34:35.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029693: ['FBtr0070671', 'FBtr0343297'] 2021-10-25 09:34:35.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9114392, 9114450), (9115183, 9115238), (9115330, 9115383), (9115660, 9115718)] 2021-10-25 09:34:35.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9114273, 9115183, 'FBtr0088569_exon_1') contains intron (9114392, 9114450) 2021-10-25 09:34:35.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088569_exon_1'] 2021-10-25 09:34:35.088 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2038008, 2039929), (2038224, 2039929), (2038641, 2039929), (2039804, 2039929), (2040154, 2040216), (2040359, 2040421), (2041573, 2041646), (2042569, 2042652), (2042851, 2042913)] 2021-10-25 09:34:35.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040723: ['FBtr0077973', 'FBtr0335382'] 2021-10-25 09:34:35.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262108: ['FBtr0304030', 'FBtr0304031', 'FBtr0343987'] 2021-10-25 09:34:35.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20800505, 20800566), (20800670, 20800722), (20801468, 20801544), (20805859, 20805921), (20806374, 20806433)] 2021-10-25 09:34:35.111 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20800409, 20800670, 'FBtr0078255_exon_1') contains intron (20800505, 20800566) 2021-10-25 09:34:35.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078255_exon_1'] 2021-10-25 09:34:35.111 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4099891, 4099992)] 2021-10-25 09:34:35.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033381: ['FBtr0088579', 'FBtr0302495'] 2021-10-25 09:34:35.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:35.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037026: ['FBtr0078272', 'FBtr0331528', 'FBtr0331529'] 2021-10-25 09:34:35.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13744944, 13745016), (13744969, 13745023)] 2021-10-25 09:34:35.173 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13744939, 13745476, 'FBtr0304031_exon_1') contains intron (13744944, 13745016) 2021-10-25 09:34:35.174 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304031_exon_1'] 2021-10-25 09:34:35.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029694: ['FBtr0347157'] 2021-10-25 09:34:35.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029694 has a single transcript. 2021-10-25 09:34:35.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9122448, 9122518), (9122567, 9122621)] 2021-10-25 09:34:35.189 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.189 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029696: ['FBtr0070664'] 2021-10-25 09:34:35.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029696 has a single transcript. 2021-10-25 09:34:35.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029697: ['FBtr0070645'] 2021-10-25 09:34:35.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029697 has a single transcript. 2021-10-25 09:34:35.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040725: ['FBtr0078004'] 2021-10-25 09:34:35.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040725 has a single transcript. 2021-10-25 09:34:35.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029700: ['FBtr0070661'] 2021-10-25 09:34:35.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029700 has a single transcript. 2021-10-25 09:34:35.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029701: ['FBtr0070646'] 2021-10-25 09:34:35.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029701 has a single transcript. 2021-10-25 09:34:35.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040726: ['FBtr0086238', 'FBtr0344877'] 2021-10-25 09:34:35.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029702: ['FBtr0070647'] 2021-10-25 09:34:35.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029702 has a single transcript. 2021-10-25 09:34:35.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029703: ['FBtr0070658', 'FBtr0345705'] 2021-10-25 09:34:35.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20808773, 20808838), (20809187, 20809243)] 2021-10-25 09:34:35.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20808838, 20809247, 'FBtr0078272_exon_1') contains intron (20809187, 20809243) 2021-10-25 09:34:35.250 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20808838, 20809247, 'FBtr0331529_exon_1') contains intron (20809187, 20809243) 2021-10-25 09:34:35.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078272_exon_1', 'FBtr0331529_exon_1'] 2021-10-25 09:34:35.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085391: ['FBtr0112583', 'FBtr0344217', 'FBtr0344218', 'FBtr0334896', 'FBtr0334897'] 2021-10-25 09:34:35.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20699270, 20726044), (20726211, 20734169), (20734247, 20734317), (20734450, 20745784), (20745904, 20746005), (20746102, 20747424), (20747522, 20748325)] 2021-10-25 09:34:35.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033382: ['FBtr0088580', 'FBtr0302496', 'FBtr0300180', 'FBtr0339360', 'FBtr0339361'] 2021-10-25 09:34:35.276 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4301699, 4301800), (4302081, 4302264)] 2021-10-25 09:34:35.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003559: ['FBtr0113733', 'FBtr0306544', 'FBtr0306545'] 2021-10-25 09:34:35.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262109: ['FBtr0309035', 'FBtr0309036', 'FBtr0309037', 'FBtr0309038', 'FBtr0304059'] 2021-10-25 09:34:35.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040729: ['FBtr0086475'] 2021-10-25 09:34:35.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040729 has a single transcript. 2021-10-25 09:34:35.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040730: ['FBtr0086482'] 2021-10-25 09:34:35.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040730 has a single transcript. 2021-10-25 09:34:35.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029705: ['FBtr0070654'] 2021-10-25 09:34:35.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029705 has a single transcript. 2021-10-25 09:34:35.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040732: ['FBtr0086499', 'FBtr0345818'] 2021-10-25 09:34:35.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037027: ['FBtr0078256', 'FBtr0331524', 'FBtr0331525', 'FBtr0331526'] 2021-10-25 09:34:35.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029706: ['FBtr0070652'] 2021-10-25 09:34:35.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029706 has a single transcript. 2021-10-25 09:34:35.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029707: ['FBtr0308918'] 2021-10-25 09:34:35.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029707 has a single transcript. 2021-10-25 09:34:35.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029708: ['FBtr0070674', 'FBtr0308916'] 2021-10-25 09:34:35.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23096875, 23097419), (23097731, 23097792), (23098115, 23098279), (23098555, 23098613), (23098917, 23099217), (23099013, 23099217), (23099409, 23099474), (23099888, 23099944), (23100052, 23100501), (23100802, 23100859)] 2021-10-25 09:34:35.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28026870, 28030498), (28031425, 28043585), (28043775, 28075676), (28047721, 28049318), (28050306, 28075676), (28075764, 28078160), (28078236, 28078535), (28078632, 28082900), (28083090, 28083229), (28083622, 28084462), (28084616, 28085425), (28084616, 28086886), (28084616, 28085404)] 2021-10-25 09:34:35.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9132589, 9133046), (9132767, 9133598), (9132767, 9133046), (9133046, 9133598), (9133347, 9133598), (9133770, 9133841)] 2021-10-25 09:34:35.389 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9132479, 9133046, 'FBtr0339360_exon_1') contains intron (9132589, 9133046) 2021-10-25 09:34:35.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19500639, 19500715), (19500859, 19500928)] 2021-10-25 09:34:35.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339360_exon_1'] 2021-10-25 09:34:35.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4530441, 4531296), (4530601, 4531296), (4532678, 4532855), (4533051, 4533119), (4533197, 4533260), (4533343, 4533524)] 2021-10-25 09:34:35.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(224183, 224972), (225140, 225725), (225849, 225909), (227459, 227517), (227764, 227820), (229244, 229588)] 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (225725, 229244, 'FBtr0309035_exon_3') contains intron (225849, 225909) 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (225725, 227459, 'FBtr0309036_exon_3') contains intron (225849, 225909) 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (227517, 230964, 'FBtr0309036_exon_4') contains intron (227764, 227820) 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (225725, 227764, 'FBtr0309037_exon_3') contains intron (225849, 225909) 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (227820, 230964, 'FBtr0309037_exon_4') contains intron (229244, 229588) 2021-10-25 09:34:35.429 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (225909, 230959, 'FBtr0309038_exon_4') contains intron (227459, 227517) 2021-10-25 09:34:35.430 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (225725, 230959, 'FBtr0304059_exon_3') contains intron (225849, 225909) 2021-10-25 09:34:35.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309035_exon_3', 'FBtr0309036_exon_3', 'FBtr0309036_exon_4', 'FBtr0309037_exon_3', 'FBtr0309037_exon_4', 'FBtr0309038_exon_4', 'FBtr0304059_exon_3'] 2021-10-25 09:34:35.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20810928, 20810980), (20811450, 20811529), (20811450, 20811523), (20812197, 20812256), (20812464, 20812523), (20812467, 20812523), (20812670, 20812725)] 2021-10-25 09:34:35.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040733: ['FBtr0086727'] 2021-10-25 09:34:35.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040733 has a single transcript. 2021-10-25 09:34:35.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040734: ['FBtr0086667'] 2021-10-25 09:34:35.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040734 has a single transcript. 2021-10-25 09:34:35.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029709: ['FBtr0070675', 'FBtr0343566'] 2021-10-25 09:34:35.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040735: ['FBtr0086666'] 2021-10-25 09:34:35.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040735 has a single transcript. 2021-10-25 09:34:35.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040736: ['FBtr0086665', 'FBtr0340328'] 2021-10-25 09:34:35.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003567: ['FBtr0082946', 'FBtr0082945', 'FBtr0310002'] 2021-10-25 09:34:35.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4541144, 4541216), (4541551, 4541906)] 2021-10-25 09:34:35.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.524 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18388236, 18388307)] 2021-10-25 09:34:35.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.549 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14305898, 14305959), (14306084, 14306152), (14306343, 14306413), (14306546, 14306603), (14307031, 14307097), (14307970, 14308523), (14307970, 14308275), (14307970, 14308034), (14308208, 14308275)] 2021-10-25 09:34:35.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037028: ['FBtr0078271', 'FBtr0302947'] 2021-10-25 09:34:35.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085395: ['FBtr0308029', 'FBtr0332598'] 2021-10-25 09:34:35.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029710: ['FBtr0070676'] 2021-10-25 09:34:35.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029710 has a single transcript. 2021-10-25 09:34:35.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029711: ['FBtr0070701', 'FBtr0308917'] 2021-10-25 09:34:35.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040737: ['FBtr0086763'] 2021-10-25 09:34:35.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040737 has a single transcript. 2021-10-25 09:34:35.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033387: ['FBtr0088622', 'FBtr0114598'] 2021-10-25 09:34:35.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040743: ['FBtr0087032'] 2021-10-25 09:34:35.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040743 has a single transcript. 2021-10-25 09:34:35.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040747: ['FBtr0087406'] 2021-10-25 09:34:35.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040747 has a single transcript. 2021-10-25 09:34:35.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040751: ['FBtr0087581'] 2021-10-25 09:34:35.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040751 has a single transcript. 2021-10-25 09:34:35.611 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20815804, 20815902), (20815962, 20816028)] 2021-10-25 09:34:35.611 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20815902, 20816039, 'FBtr0078271_exon_1') contains intron (20815962, 20816028) 2021-10-25 09:34:35.611 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9373656, 9374682), (9374787, 9377839), (9374787, 9379730), (9378145, 9379730), (9379983, 9380049), (9380259, 9380420), (9380717, 9380814), (9381318, 9381383), (9381563, 9381630), (9381763, 9384639), (9384789, 9405831), (9406263, 9414786)] 2021-10-25 09:34:35.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078271_exon_1'] 2021-10-25 09:34:35.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040752: ['FBtr0087601', 'FBtr0339763', 'FBtr0339764', 'FBtr0339765'] 2021-10-25 09:34:35.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262111: ['FBtr0344942', 'FBtr0304061', 'FBtr0304062', 'FBtr0304064', 'FBtr0304065', 'FBtr0304066', 'FBtr0304067', 'FBtr0304068', 'FBtr0304069'] 2021-10-25 09:34:35.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4546824, 4547385)] 2021-10-25 09:34:35.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9158669, 9158773), (9158882, 9158946), (9158994, 9159077), (9159267, 9159335), (9159472, 9159532), (9160303, 9160621), (9160772, 9160840), (9160950, 9161035)] 2021-10-25 09:34:35.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.650 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9160621, 9160950, 'FBtr0088622_exon_2') contains intron (9160772, 9160840) 2021-10-25 09:34:35.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088622_exon_2'] 2021-10-25 09:34:35.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003575: ['FBtr0070120', 'FBtr0340081', 'FBtr0340082'] 2021-10-25 09:34:35.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037030: ['FBtr0078262', 'FBtr0345826'] 2021-10-25 09:34:35.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085396: ['FBtr0112592', 'FBtr0333005', 'FBtr0301049'] 2021-10-25 09:34:35.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029712: ['FBtr0070677'] 2021-10-25 09:34:35.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029712 has a single transcript. 2021-10-25 09:34:35.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20836520, 20836584)] 2021-10-25 09:34:35.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033388: ['FBtr0088620', 'FBtr0088621'] 2021-10-25 09:34:35.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029713: ['FBtr0070699'] 2021-10-25 09:34:35.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029713 has a single transcript. 2021-10-25 09:34:35.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14063913, 14063977), (14065903, 14065967), (14066574, 14068844), (14066574, 14067246), (14067684, 14068844), (14068911, 14069216), (14068911, 14069714), (14069411, 14069714), (14069883, 14069947), (14070279, 14070351), (14070477, 14091992), (14092501, 14114215), (14114296, 14139788)] 2021-10-25 09:34:35.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029714: ['FBtr0070678'] 2021-10-25 09:34:35.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029714 has a single transcript. 2021-10-25 09:34:35.727 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(636279, 638332), (636587, 638332), (638720, 638780), (639016, 639719), (641017, 641077), (641190, 641296), (641202, 641296)] 2021-10-25 09:34:35.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029715: ['FBtr0070698', 'FBtr0343567'] 2021-10-25 09:34:35.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9162784, 9162846), (9163003, 9163070), (9163260, 9163328), (9163474, 9163702), (9164025, 9164082), (9164272, 9164328), (9164479, 9164537), (9164647, 9164715)] 2021-10-25 09:34:35.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10348196, 10348659), (10348973, 10350719), (10348973, 10351714), (10350777, 10351714), (10352025, 10353231)] 2021-10-25 09:34:35.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9164328, 9164647, 'FBtr0088621_exon_2') contains intron (9164479, 9164537) 2021-10-25 09:34:35.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088621_exon_2'] 2021-10-25 09:34:35.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037031: ['FBtr0078264', 'FBtr0300873', 'FBtr0333371'] 2021-10-25 09:34:35.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:35.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033389: ['FBtr0301527'] 2021-10-25 09:34:35.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033389 has a single transcript. 2021-10-25 09:34:35.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20842349, 20842402), (20842928, 20842980), (20843358, 20843420), (20843586, 20843926), (20844024, 20844117)] 2021-10-25 09:34:35.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033391: ['FBtr0088611', 'FBtr0302511', 'FBtr0302512'] 2021-10-25 09:34:35.822 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20842402, 20843358, 'FBtr0300873_exon_2') contains intron (20842928, 20842980) 2021-10-25 09:34:35.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300873_exon_2'] 2021-10-25 09:34:35.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003598: ['FBtr0082736', 'FBtr0301657'] 2021-10-25 09:34:35.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029716: ['FBtr0070679'] 2021-10-25 09:34:35.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029716 has a single transcript. 2021-10-25 09:34:35.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029717: ['FBtr0070697'] 2021-10-25 09:34:35.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029717 has a single transcript. 2021-10-25 09:34:35.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17233170, 17249787), (17250733, 17262639), (17252615, 17262639), (17260331, 17262639), (17262978, 17268518), (17262978, 17269930), (17265780, 17268518), (17268989, 17269930), (17270114, 17271221), (17271404, 17271487), (17272705, 17272891), (17273348, 17273511), (17273832, 17277614), (17275750, 17277614), (17278143, 17278950), (17278819, 17278950), (17279311, 17279418), (17279667, 17279732), (17279667, 17279744), (17279941, 17280009)] 2021-10-25 09:34:35.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085397: ['FBtr0112593', 'FBtr0330338'] 2021-10-25 09:34:35.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029718: ['FBtr0070682'] 2021-10-25 09:34:35.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029718 has a single transcript. 2021-10-25 09:34:35.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13265300, 13265734), (13265300, 13265740), (13266319, 13266387), (13266732, 13266787), (13267765, 13267832)] 2021-10-25 09:34:35.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.863 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040754: ['FBtr0087739'] 2021-10-25 09:34:35.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040754 has a single transcript. 2021-10-25 09:34:35.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029719: ['FBtr0070689'] 2021-10-25 09:34:35.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029719 has a single transcript. 2021-10-25 09:34:35.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040755: ['FBtr0087857'] 2021-10-25 09:34:35.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040755 has a single transcript. 2021-10-25 09:34:35.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029720: ['FBtr0070688', 'FBtr0300468', 'FBtr0332316'] 2021-10-25 09:34:35.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040759: ['FBtr0112772', 'FBtr0345490'] 2021-10-25 09:34:35.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9187134, 9188119), (9188265, 9188653), (9189008, 9189066), (9189220, 9191275), (9189220, 9190269)] 2021-10-25 09:34:35.893 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9186669, 9188265, 'FBtr0088611_exon_4') contains intron (9187134, 9188119) 2021-10-25 09:34:35.894 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088611_exon_4'] 2021-10-25 09:34:35.894 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21872694, 21921516), (21883589, 21891299), (21891346, 21909033), (21909098, 21921516), (21921592, 21929401), (21930350, 21934431), (21934592, 21943251)] 2021-10-25 09:34:35.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037035: ['FBtr0078266'] 2021-10-25 09:34:35.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037035 has a single transcript. 2021-10-25 09:34:35.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037036: ['FBtr0078335'] 2021-10-25 09:34:35.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037036 has a single transcript. 2021-10-25 09:34:35.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037037: ['FBtr0078284', 'FBtr0346528'] 2021-10-25 09:34:35.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12163800, 12163861), (12163921, 12163983)] 2021-10-25 09:34:35.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.931 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003607: ['FBtr0079635', 'FBtr0079636'] 2021-10-25 09:34:35.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4658536, 4659734), (4660187, 4660257), (4660432, 4666430)] 2021-10-25 09:34:35.954 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4658157, 4660187, 'FBtr0070688_exon_3') contains intron (4658536, 4659734) 2021-10-25 09:34:35.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070688_exon_3'] 2021-10-25 09:34:35.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085398: ['FBtr0112594', 'FBtr0344888'] 2021-10-25 09:34:35.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:35.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:35.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8210103, 8210352), (8210473, 8210549), (8210666, 8210729), (8210861, 8210978)] 2021-10-25 09:34:35.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8210729, 8211122, 'FBtr0079636_exon_1') contains intron (8210861, 8210978) 2021-10-25 09:34:35.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079636_exon_1'] 2021-10-25 09:34:35.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:35.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040763: ['FBtr0088175', 'FBtr0336733'] 2021-10-25 09:34:35.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033392: ['FBtr0088609'] 2021-10-25 09:34:35.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033392 has a single transcript. 2021-10-25 09:34:35.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033395: ['FBtr0088591'] 2021-10-25 09:34:36.000 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033395 has a single transcript. 2021-10-25 09:34:36.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21964699, 21967725), (21967923, 21968000), (21968285, 21968348), (21968585, 21968659), (21968585, 21968665), (21968814, 21969035), (21968844, 21969035), (21969101, 21969512), (21969604, 21970168), (21970234, 21970449), (21970489, 21970554)] 2021-10-25 09:34:36.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033397: ['FBtr0088593'] 2021-10-25 09:34:36.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033397 has a single transcript. 2021-10-25 09:34:36.009 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037038: ['FBtr0078334'] 2021-10-25 09:34:36.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037038 has a single transcript. 2021-10-25 09:34:36.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033400: ['FBtr0088600'] 2021-10-25 09:34:36.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033400 has a single transcript. 2021-10-25 09:34:36.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037039: ['FBtr0078333', 'FBtr0333286', 'FBtr0339891'] 2021-10-25 09:34:36.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11294188, 11294249)] 2021-10-25 09:34:36.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033401: ['FBtr0088595', 'FBtr0088596'] 2021-10-25 09:34:36.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003612: ['FBtr0088571', 'FBtr0088572', 'FBtr0088573', 'FBtr0088574', 'FBtr0088575', 'FBtr0088576', 'FBtr0088577', 'FBtr0088578', 'FBtr0088570', 'FBtr0302505', 'FBtr0302506', 'FBtr0302507', 'FBtr0343996', 'FBtr0306705'] 2021-10-25 09:34:36.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029722: ['FBtr0070712'] 2021-10-25 09:34:36.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029722 has a single transcript. 2021-10-25 09:34:36.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029723: ['FBtr0070714', 'FBtr0070713', 'FBtr0100551', 'FBtr0100552', 'FBtr0345320'] 2021-10-25 09:34:36.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040764: ['FBtr0088204'] 2021-10-25 09:34:36.077 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040764 has a single transcript. 2021-10-25 09:34:36.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085399: ['FBtr0299544', 'FBtr0332252'] 2021-10-25 09:34:36.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9286937, 9286995), (9287627, 9287682), (9287903, 9287962)] 2021-10-25 09:34:36.078 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9287682, 9289026, 'FBtr0088596_exon_3') contains intron (9287903, 9287962) 2021-10-25 09:34:36.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088596_exon_3'] 2021-10-25 09:34:36.079 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20961782, 20961844), (20961782, 20961935), (20961883, 20961935)] 2021-10-25 09:34:36.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20961844, 20962555, 'FBtr0339891_exon_1') contains intron (20961883, 20961935) 2021-10-25 09:34:36.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339891_exon_1'] 2021-10-25 09:34:36.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040765: ['FBtr0088210', 'FBtr0345675', 'FBtr0333066'] 2021-10-25 09:34:36.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21989807, 21994613), (21994893, 21994954), (21995109, 21998800), (21998974, 22000699), (22000806, 22004707), (22004851, 22004982), (22005275, 22037391), (22037716, 22039355), (22037719, 22039403)] 2021-10-25 09:34:36.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033402: ['FBtr0088598', 'FBtr0333000', 'FBtr0345024'] 2021-10-25 09:34:36.154 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10983473, 10989627), (10989774, 10989836), (10991124, 11099531), (11100114, 11105906), (11100114, 11116039)] 2021-10-25 09:34:36.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.174 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4707973, 4708917), (4707973, 4708823), (4708168, 4708823), (4708168, 4708779), (4709010, 4723177), (4723567, 4725021), (4725194, 4726235), (4726352, 4726426), (4726714, 4726874), (4727101, 4727358), (4727562, 4727622)] 2021-10-25 09:34:36.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037040: ['FBtr0114616', 'FBtr0114617', 'FBtr0114618', 'FBtr0333285', 'FBtr0308681'] 2021-10-25 09:34:36.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085400: ['FBtr0112596', 'FBtr0330239'] 2021-10-25 09:34:36.212 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9304335, 9304973), (9305160, 9305233), (9305402, 9305466), (9305756, 9307268)] 2021-10-25 09:34:36.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23165096, 23165963), (23166367, 23166715), (23167015, 23168049), (23168775, 23168981), (23169135, 23169253), (23169384, 23169441), (23169649, 23169713), (23169865, 23170583), (23170656, 23172486), (23172731, 23172796), (23173005, 23176150), (23176286, 23191124), (23191604, 23203516)] 2021-10-25 09:34:36.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262112: ['FBtr0085481'] 2021-10-25 09:34:36.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262112 has a single transcript. 2021-10-25 09:34:36.240 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0112596': ['FBtr0330239']} 2021-10-25 09:34:36.240 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330239']] 2021-10-25 09:34:36.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085404: ['FBtr0112607', 'FBtr0302319', 'FBtr0337071'] 2021-10-25 09:34:36.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262114: ['FBtr0088263', 'FBtr0088262', 'FBtr0100460', 'FBtr0330614', 'FBtr0306247', 'FBtr0346961'] 2021-10-25 09:34:36.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040773: ['FBtr0088396', 'FBtr0088397', 'FBtr0339411', 'FBtr0339412'] 2021-10-25 09:34:36.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20962988, 20963047), (20963392, 20963448), (20963620, 20963689), (20965143, 20965201), (20965409, 20965467), (20965755, 20966128), (20965755, 20965809), (20965911, 20966128), (20965911, 20965977), (20966063, 20966128), (20966517, 20966575)] 2021-10-25 09:34:36.293 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965809, 20966517, 'FBtr0114617_exon_2') contains intron (20965911, 20966128) 2021-10-25 09:34:36.294 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965809, 20966063, 'FBtr0333285_exon_3') contains intron (20965911, 20965977) 2021-10-25 09:34:36.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114617_exon_2', 'FBtr0333285_exon_3'] 2021-10-25 09:34:36.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23001581, 23002841), (23003013, 23006594), (23006681, 23008001), (23006684, 23008001), (23008321, 23010366), (23008321, 23009571)] 2021-10-25 09:34:36.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033403: ['FBtr0088558'] 2021-10-25 09:34:36.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033403 has a single transcript. 2021-10-25 09:34:36.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033404: ['FBtr0088503'] 2021-10-25 09:34:36.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033404 has a single transcript. 2021-10-25 09:34:36.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033405: ['FBtr0332996', 'FBtr0332997'] 2021-10-25 09:34:36.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029724: ['FBtr0070736'] 2021-10-25 09:34:36.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029724 has a single transcript. 2021-10-25 09:34:36.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029725: ['FBtr0070734'] 2021-10-25 09:34:36.361 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029725 has a single transcript. 2021-10-25 09:34:36.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10048486, 10049407), (10048486, 10048998), (10049221, 10049407), (10049644, 10049752), (10049899, 10049959), (10049904, 10049959)] 2021-10-25 09:34:36.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029726: ['FBtr0299601', 'FBtr0299602'] 2021-10-25 09:34:36.383 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9116451, 9117177), (9116851, 9117177), (9117852, 9117916), (9118157, 9118214), (9118449, 9118505), (9118672, 9118738), (9118827, 9118887), (9118827, 9118899), (9119047, 9119752), (9119047, 9121735), (9119047, 9120777), (9119047, 9120299), (9119047, 9121093), (9119831, 9119910)] 2021-10-25 09:34:36.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9118899, 9120105, 'FBtr0088571_exon_7') contains intron (9119047, 9119752) 2021-10-25 09:34:36.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9116617, 9117852, 'FBtr0088573_exon_1') contains intron (9116851, 9117177) 2021-10-25 09:34:36.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9116617, 9117852, 'FBtr0088574_exon_1') contains intron (9116851, 9117177) 2021-10-25 09:34:36.385 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9116617, 9117852, 'FBtr0088575_exon_1') contains intron (9116851, 9117177) 2021-10-25 09:34:36.385 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9118899, 9120105, 'FBtr0088576_exon_7') contains intron (9119047, 9119752) 2021-10-25 09:34:36.386 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9116617, 9117852, 'FBtr0302506_exon_1') contains intron (9116851, 9117177) 2021-10-25 09:34:36.387 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088571_exon_7', 'FBtr0088573_exon_1', 'FBtr0088574_exon_1', 'FBtr0088575_exon_1', 'FBtr0088576_exon_7', 'FBtr0302506_exon_1'] 2021-10-25 09:34:36.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10429783, 10430533), (10429783, 10430879), (10430073, 10430879), (10431915, 10433038), (10433203, 10433271), (10433203, 10433274), (10433465, 10433541), (10433723, 10433786), (10433899, 10433960), (10434112, 10434170), (10434373, 10434426), (10434590, 10434636), (10434590, 10434645), (10434590, 10434651), (10434785, 10434917), (10435029, 10435085)] 2021-10-25 09:34:36.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9312745, 9370248), (9370378, 9370441), (9370517, 9371564), (9371711, 9372201), (9372307, 9372378), (9373063, 9373177), (9374597, 9387781)] 2021-10-25 09:34:36.398 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4782714, 4782768)] 2021-10-25 09:34:36.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.420 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088263': ['FBtr0346961']} 2021-10-25 09:34:36.420 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346961']] 2021-10-25 09:34:36.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085405: ['FBtr0112608', 'FBtr0112609'] 2021-10-25 09:34:36.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033408: ['FBtr0088555'] 2021-10-25 09:34:36.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033408 has a single transcript. 2021-10-25 09:34:36.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033412: ['FBtr0088551'] 2021-10-25 09:34:36.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033412 has a single transcript. 2021-10-25 09:34:36.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029727: ['FBtr0070715'] 2021-10-25 09:34:36.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029727 has a single transcript. 2021-10-25 09:34:36.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22448620, 22456550), (22457477, 22459841), (22457477, 22458320)] 2021-10-25 09:34:36.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033413: ['FBtr0333003', 'FBtr0300293'] 2021-10-25 09:34:36.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029728: ['FBtr0070731', 'FBtr0302037', 'FBtr0332312', 'FBtr0332313'] 2021-10-25 09:34:36.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037042: ['FBtr0078286', 'FBtr0344990'] 2021-10-25 09:34:36.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040775: ['FBtr0088557'] 2021-10-25 09:34:36.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040775 has a single transcript. 2021-10-25 09:34:36.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040777: ['FBtr0088718', 'FBtr0088719', 'FBtr0088720'] 2021-10-25 09:34:36.533 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9424266, 9424328), (9424266, 9424331), (9424460, 9424538), (9424915, 9425246)] 2021-10-25 09:34:36.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.533 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20992160, 20992594), (20992531, 20992594)] 2021-10-25 09:34:36.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085407: ['FBtr0112611', 'FBtr0112612', 'FBtr0301525', 'FBtr0342658'] 2021-10-25 09:34:36.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4797570, 4797632), (4797872, 4797966), (4798041, 4798098), (4798512, 4798570), (4799878, 4799939), (4799881, 4799939), (4800047, 4800107), (4800647, 4800958), (4803352, 4803426), (4803618, 4804697), (4803618, 4803689), (4803820, 4804697)] 2021-10-25 09:34:36.570 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4797966, 4798512, 'FBtr0070731_exon_7') contains intron (4798041, 4798098) 2021-10-25 09:34:36.570 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4799939, 4800647, 'FBtr0070731_exon_5') contains intron (4800047, 4800107) 2021-10-25 09:34:36.571 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4799939, 4800647, 'FBtr0332312_exon_5') contains intron (4800047, 4800107) 2021-10-25 09:34:36.571 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4797966, 4798512, 'FBtr0332313_exon_8') contains intron (4798041, 4798098) 2021-10-25 09:34:36.571 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070731_exon_7', 'FBtr0070731_exon_5', 'FBtr0332312_exon_5', 'FBtr0332313_exon_8'] 2021-10-25 09:34:36.571 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8719489, 8719645), (8719784, 8719854), (8719784, 8719842), (8720032, 8723256), (8723452, 8723705)] 2021-10-25 09:34:36.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037044: ['FBtr0078287', 'FBtr0345136'] 2021-10-25 09:34:36.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262115: ['FBtr0111298', 'FBtr0111300', 'FBtr0111301', 'FBtr0111299'] 2021-10-25 09:34:36.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033421: ['FBtr0088547', 'FBtr0310031', 'FBtr0310032', 'FBtr0310033'] 2021-10-25 09:34:36.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21028657, 21028715), (21028905, 21029084)] 2021-10-25 09:34:36.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.654 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7100207, 7100277), (7100555, 7107140), (7107352, 7107418), (7107551, 7155486), (7107551, 7118884), (7107551, 7132723), (7118923, 7132723), (7118923, 7155486)] 2021-10-25 09:34:36.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040778: ['FBtr0088826'] 2021-10-25 09:34:36.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040778 has a single transcript. 2021-10-25 09:34:36.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040780: ['FBtr0113331', 'FBtr0340658'] 2021-10-25 09:34:36.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4131124, 4131187), (4131124, 4131175), (4131268, 4131321), (4131268, 4131346), (4131979, 4132036)] 2021-10-25 09:34:36.695 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4131175, 4131979, 'FBtr0111300_exon_2') contains intron (4131268, 4131321) 2021-10-25 09:34:36.695 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4130973, 4131268, 'FBtr0111301_exon_1') contains intron (4131124, 4131187) 2021-10-25 09:34:36.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111300_exon_2', 'FBtr0111301_exon_1'] 2021-10-25 09:34:36.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9543992, 9544048), (9546296, 9546725), (9546952, 9547018), (9547718, 9547787)] 2021-10-25 09:34:36.700 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9546725, 9548135, 'FBtr0310033_exon_1') contains intron (9546952, 9547018) 2021-10-25 09:34:36.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310033_exon_1'] 2021-10-25 09:34:36.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037045: ['FBtr0078327'] 2021-10-25 09:34:36.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037045 has a single transcript. 2021-10-25 09:34:36.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037046: ['FBtr0078326'] 2021-10-25 09:34:36.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037046 has a single transcript. 2021-10-25 09:34:36.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029729: ['FBtr0070716'] 2021-10-25 09:34:36.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029729 has a single transcript. 2021-10-25 09:34:36.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7832223, 7833933), (7834033, 7834098), (7834255, 7834312), (7834627, 7834684)] 2021-10-25 09:34:36.729 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7834312, 7835518, 'FBtr0340658_exon_4') contains intron (7834627, 7834684) 2021-10-25 09:34:36.729 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340658_exon_4'] 2021-10-25 09:34:36.729 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037050: ['FBtr0078292', 'FBtr0305500'] 2021-10-25 09:34:36.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029730: ['FBtr0070717'] 2021-10-25 09:34:36.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029730 has a single transcript. 2021-10-25 09:34:36.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029733: ['FBtr0070721'] 2021-10-25 09:34:36.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029733 has a single transcript. 2021-10-25 09:34:36.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029736: ['FBtr0300998'] 2021-10-25 09:34:36.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029736 has a single transcript. 2021-10-25 09:34:36.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029737: ['FBtr0070723', 'FBtr0343535'] 2021-10-25 09:34:36.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21132378, 21132447), (21132687, 21132748)] 2021-10-25 09:34:36.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040784: ['FBtr0301572'] 2021-10-25 09:34:36.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040784 has a single transcript. 2021-10-25 09:34:36.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040786: ['FBtr0299563'] 2021-10-25 09:34:36.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040786 has a single transcript. 2021-10-25 09:34:36.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040793: ['FBtr0075217'] 2021-10-25 09:34:36.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040793 has a single transcript. 2021-10-25 09:34:36.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085408: ['FBtr0339991', 'FBtr0112614', 'FBtr0112616', 'FBtr0290253'] 2021-10-25 09:34:36.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040794: ['FBtr0075376'] 2021-10-25 09:34:36.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040794 has a single transcript. 2021-10-25 09:34:36.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4919340, 4919453), (4919593, 4919898), (4920020, 4920094), (4920269, 4920329), (4920991, 4921045)] 2021-10-25 09:34:36.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.805 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040795: ['FBtr0075429'] 2021-10-25 09:34:36.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040795 has a single transcript. 2021-10-25 09:34:36.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040796: ['FBtr0089378'] 2021-10-25 09:34:36.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040796 has a single transcript. 2021-10-25 09:34:36.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040797: ['FBtr0302928'] 2021-10-25 09:34:36.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040797 has a single transcript. 2021-10-25 09:34:36.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040798: ['FBtr0075463'] 2021-10-25 09:34:36.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040798 has a single transcript. 2021-10-25 09:34:36.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037051: ['FBtr0078323', 'FBtr0305502'] 2021-10-25 09:34:36.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040799: ['FBtr0112771'] 2021-10-25 09:34:36.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040799 has a single transcript. 2021-10-25 09:34:36.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262116: ['FBtr0334986', 'FBtr0111266'] 2021-10-25 09:34:36.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040801: ['FBtr0075480', 'FBtr0333563'] 2021-10-25 09:34:36.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033422: ['FBtr0088519'] 2021-10-25 09:34:36.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033422 has a single transcript. 2021-10-25 09:34:36.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029740: ['FBtr0300018', 'FBtr0343530'] 2021-10-25 09:34:36.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033423: ['FBtr0088520'] 2021-10-25 09:34:36.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033423 has a single transcript. 2021-10-25 09:34:36.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033426: ['FBtr0088521', 'FBtr0088522', 'FBtr0088523'] 2021-10-25 09:34:36.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21134905, 21135363), (21135509, 21135617)] 2021-10-25 09:34:36.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4187692, 4187759), (4187879, 4187945)] 2021-10-25 09:34:36.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.881 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.888 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16259342, 16259408)] 2021-10-25 09:34:36.889 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.889 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14308293, 14315236), (14308293, 14315033), (14315533, 14325849), (14326085, 14326807), (14327172, 14327716), (14328479, 14328551), (14329548, 14329632), (14329814, 14349391), (14332920, 14349391), (14342256, 14349391), (14350847, 14350910), (14351168, 14351236)] 2021-10-25 09:34:36.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:36.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262117: ['FBtr0111268'] 2021-10-25 09:34:36.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262117 has a single transcript. 2021-10-25 09:34:36.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037057: ['FBtr0078297', 'FBtr0078298', 'FBtr0078299', 'FBtr0078300'] 2021-10-25 09:34:36.940 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9577557, 9579962), (9579787, 9579962), (9579836, 9579962), (9580366, 9580451), (9580747, 9580817), (9581004, 9581065), (9581206, 9581265), (9581417, 9581485)] 2021-10-25 09:34:36.941 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:36.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:36.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262123: ['FBtr0114030', 'FBtr0114029'] 2021-10-25 09:34:36.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040805: ['FBtr0075606', 'FBtr0113333', 'FBtr0300758', 'FBtr0334086'] 2021-10-25 09:34:36.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029745: ['FBtr0070741'] 2021-10-25 09:34:36.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029745 has a single transcript. 2021-10-25 09:34:36.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003638: ['FBtr0070177', 'FBtr0070176', 'FBtr0070178', 'FBtr0302884', 'FBtr0305651', 'FBtr0305652', 'FBtr0336687'] 2021-10-25 09:34:36.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029746: ['FBtr0070742', 'FBtr0344669'] 2021-10-25 09:34:36.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1349498, 1367499), (1367713, 1367771), (1368399, 1368466), (1368609, 1437833), (1438393, 1439012), (1439157, 1442768), (1442977, 1443028)] 2021-10-25 09:34:36.989 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1367499, 1368399, 'FBtr0114030_exon_2') contains intron (1367713, 1367771) 2021-10-25 09:34:36.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114030_exon_2'] 2021-10-25 09:34:36.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5086201, 5089341), (5090145, 5163900), (5165498, 5174896), (5176788, 5186902), (5187429, 5203310), (5203415, 5217430), (5217557, 5221240), (5221437, 5223918), (5224040, 5224140), (5224267, 5224355), (5224475, 5224686), (5224833, 5225236), (5225293, 5228326), (5225828, 5225913), (5225999, 5228326), (5228467, 5228875), (5229015, 5229190), (5229404, 5233441), (5233664, 5233771), (5233914, 5234023), (5234214, 5234318), (5234509, 5234698), (5237436, 5237521), (5237836, 5237898), (5238006, 5238116), (5238267, 5243376), (5243486, 5246522), (5249400, 5249469), (5249643, 5249748), (5250012, 5250077), (5250274, 5250422), (5250574, 5250728)] 2021-10-25 09:34:37.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21203322, 21205676), (21204838, 21205676), (21205508, 21205676), (21206626, 21207435)] 2021-10-25 09:34:37.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.037 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15493330, 15493468), (15493581, 15493939), (15493581, 15495238), (15493581, 15494566), (15494658, 15494759), (15494902, 15495238)] 2021-10-25 09:34:37.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033427: ['FBtr0088542', 'FBtr0339393'] 2021-10-25 09:34:37.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.038 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085409: ['FBtr0112617', 'FBtr0329979', 'FBtr0329980'] 2021-10-25 09:34:37.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262124: ['FBtr0302226', 'FBtr0302227', 'FBtr0334938', 'FBtr0346683'] 2021-10-25 09:34:37.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9582073, 9582128), (9582450, 9582504), (9583525, 9583580), (9584242, 9584464)] 2021-10-25 09:34:37.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029747: ['FBtr0070759'] 2021-10-25 09:34:37.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029747 has a single transcript. 2021-10-25 09:34:37.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029750: ['FBtr0070758'] 2021-10-25 09:34:37.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029750 has a single transcript. 2021-10-25 09:34:37.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029751: ['FBtr0070757'] 2021-10-25 09:34:37.103 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029751 has a single transcript. 2021-10-25 09:34:37.116 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6179699, 6190438), (6190696, 6192753), (6192859, 6196543), (6196775, 6196848), (6196996, 6201261), (6201441, 6203178), (6203318, 6203410), (6203618, 6206209), (6206425, 6206634), (6206867, 6207536), (6207675, 6207892), (6208912, 6209055)] 2021-10-25 09:34:37.117 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029752: ['FBtr0070755', 'FBtr0340478'] 2021-10-25 09:34:37.132 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1013394, 1013939), (1014140, 1042259), (1033401, 1040981), (1033407, 1040986), (1041403, 1042259), (1042432, 1043212), (1042432, 1042933), (1042432, 1042729), (1042432, 1042802), (1042885, 1043212), (1043421, 1043490), (1044210, 1044267), (1044589, 1044649), (1044901, 1044970), (1045099, 1045154)] 2021-10-25 09:34:37.133 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1040986, 1042432, 'FBtr0070177_exon_2') contains intron (1041403, 1042259) 2021-10-25 09:34:37.133 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1040986, 1043421, 'FBtr0070178_exon_2') contains intron (1041403, 1042259) 2021-10-25 09:34:37.133 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1042259, 1043421, 'FBtr0302884_exon_3') contains intron (1042432, 1043212) 2021-10-25 09:34:37.134 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1042802, 1043421, 'FBtr0305652_exon_4') contains intron (1042885, 1043212) 2021-10-25 09:34:37.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070177_exon_2', 'FBtr0070178_exon_2', 'FBtr0302884_exon_3', 'FBtr0305652_exon_4'] 2021-10-25 09:34:37.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.134 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329979': ['FBtr0329980']} 2021-10-25 09:34:37.134 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329980']] 2021-10-25 09:34:37.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3901330, 3918150), (3918417, 3918474), (3919120, 3919184), (3919358, 3933010), (3933226, 3933274), (3933463, 3938551), (3938885, 3942933), (3943138, 3943195), (3943141, 3943195), (3943335, 3947599), (3943335, 3943428), (3944011, 3949345), (3948182, 3949345)] 2021-10-25 09:34:37.141 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3942933, 3943335, 'FBtr0302226_exon_3') contains intron (3943138, 3943195) 2021-10-25 09:34:37.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302226_exon_3'] 2021-10-25 09:34:37.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033428: ['FBtr0088524'] 2021-10-25 09:34:37.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033428 has a single transcript. 2021-10-25 09:34:37.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033429: ['FBtr0088541', 'FBtr0113060'] 2021-10-25 09:34:37.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5311126, 5311193), (5311126, 5311197), (5311719, 5311852)] 2021-10-25 09:34:37.162 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037059: ['FBtr0078310'] 2021-10-25 09:34:37.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037059 has a single transcript. 2021-10-25 09:34:37.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040809: ['FBtr0075674'] 2021-10-25 09:34:37.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040809 has a single transcript. 2021-10-25 09:34:37.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037060: ['FBtr0307385', 'FBtr0307386', 'FBtr0307387', 'FBtr0331854'] 2021-10-25 09:34:37.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040812: ['FBtr0075802', 'FBtr0345696'] 2021-10-25 09:34:37.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085410: ['FBtr0112619', 'FBtr0330221', 'FBtr0330222', 'FBtr0342612'] 2021-10-25 09:34:37.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9586231, 9586289), (9586595, 9586649)] 2021-10-25 09:34:37.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9586109, 9586595, 'FBtr0113060_exon_2') contains intron (9586231, 9586289) 2021-10-25 09:34:37.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113060_exon_2'] 2021-10-25 09:34:37.195 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029753: ['FBtr0070750', 'FBtr0340475'] 2021-10-25 09:34:37.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:37.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033431: ['FBtr0339392'] 2021-10-25 09:34:37.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033431 has a single transcript. 2021-10-25 09:34:37.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033434: ['FBtr0088531', 'FBtr0088532'] 2021-10-25 09:34:37.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21210804, 21212049), (21212158, 21212226), (21212158, 21212229), (21212388, 21212781), (21212957, 21213843), (21212957, 21213128), (21213491, 21213843), (21214097, 21214150), (21214376, 21214611), (21214376, 21215372), (21215112, 21215372), (21215501, 21215575)] 2021-10-25 09:34:37.266 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.266 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5825249, 5845304), (5845952, 5848341), (5848486, 5850099), (5850259, 5850830), (5851031, 5851475), (5851826, 5852883), (5851826, 5852992), (5852898, 5852992), (5853258, 5856098), (5856318, 5856382), (5856318, 5856403)] 2021-10-25 09:34:37.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5314145, 5314214), (5314145, 5314211)] 2021-10-25 09:34:37.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.273 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.273 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040813: ['FBtr0075839', 'FBtr0346389', 'FBtr0346863'] 2021-10-25 09:34:37.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262125: ['FBtr0309091', 'FBtr0304794', 'FBtr0310266', 'FBtr0078710', 'FBtr0078711', 'FBtr0330314', 'FBtr0339320'] 2021-10-25 09:34:37.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9594159, 9603868), (9604180, 9604244), (9604611, 9604669)] 2021-10-25 09:34:37.305 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029754: ['FBtr0301881'] 2021-10-25 09:34:37.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029754 has a single transcript. 2021-10-25 09:34:37.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029755: ['FBtr0070751'] 2021-10-25 09:34:37.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029755 has a single transcript. 2021-10-25 09:34:37.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13356643, 13356726), (13356852, 13357007)] 2021-10-25 09:34:37.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.357 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029756: ['FBtr0070798', 'FBtr0344827'] 2021-10-25 09:34:37.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033437: ['FBtr0088502'] 2021-10-25 09:34:37.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033437 has a single transcript. 2021-10-25 09:34:37.367 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075839': ['FBtr0346863']} 2021-10-25 09:34:37.368 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346863']] 2021-10-25 09:34:37.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033438: ['FBtr0088501', 'FBtr0334807', 'FBtr0334808'] 2021-10-25 09:34:37.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5328106, 5328168), (5328109, 5328168)] 2021-10-25 09:34:37.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037061: ['FBtr0078309'] 2021-10-25 09:34:37.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037061 has a single transcript. 2021-10-25 09:34:37.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040814: ['FBtr0075837'] 2021-10-25 09:34:37.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040814 has a single transcript. 2021-10-25 09:34:37.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085411: ['FBtr0112620', 'FBtr0332685', 'FBtr0332686', 'FBtr0332687'] 2021-10-25 09:34:37.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003651: ['FBtr0082562', 'FBtr0082563', 'FBtr0082564', 'FBtr0331183'] 2021-10-25 09:34:37.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037063: ['FBtr0078417', 'FBtr0305708'] 2021-10-25 09:34:37.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040816: ['FBtr0076074'] 2021-10-25 09:34:37.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040816 has a single transcript. 2021-10-25 09:34:37.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040817: ['FBtr0113334'] 2021-10-25 09:34:37.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040817 has a single transcript. 2021-10-25 09:34:37.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040823: ['FBtr0076353', 'FBtr0344949', 'FBtr0331536', 'FBtr0332665', 'FBtr0332666'] 2021-10-25 09:34:37.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9612618, 9612687), (9612829, 9612893), (9613759, 9614826), (9614972, 9615362), (9615503, 9657593), (9615503, 9667364), (9615503, 9643204), (9643476, 9657593), (9667567, 9667672), (9667774, 9682782)] 2021-10-25 09:34:37.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5649150, 5649358), (5649237, 5649329), (5649237, 5649358), (5649660, 5649719), (5650969, 5651031), (5651185, 5651253), (5651802, 5651980), (5651802, 5652380), (5652001, 5652380), (5652004, 5652380)] 2021-10-25 09:34:37.455 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5649064, 5649660, 'FBtr0304794_exon_1') contains intron (5649150, 5649358) 2021-10-25 09:34:37.455 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5649064, 5649660, 'FBtr0078710_exon_1') contains intron (5649150, 5649358) 2021-10-25 09:34:37.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304794_exon_1', 'FBtr0078710_exon_1'] 2021-10-25 09:34:37.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21267105, 21267166), (21267535, 21267586), (21267720, 21267790), (21267905, 21268208)] 2021-10-25 09:34:37.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029761: ['FBtr0300467', 'FBtr0331602', 'FBtr0331603', 'FBtr0331604', 'FBtr0301949', 'FBtr0301950', 'FBtr0301951', 'FBtr0301952', 'FBtr0301953', 'FBtr0301954', 'FBtr0344555', 'FBtr0344556', 'FBtr0344557', 'FBtr0344558'] 2021-10-25 09:34:37.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9879106, 9879333), (9879576, 9880205), (9880573, 9882301), (9880573, 9882307), (9882616, 9882677)] 2021-10-25 09:34:37.513 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9878984, 9879576, 'FBtr0112620_exon_1') contains intron (9879106, 9879333) 2021-10-25 09:34:37.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9878984, 9879576, 'FBtr0332685_exon_1') contains intron (9879106, 9879333) 2021-10-25 09:34:37.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112620_exon_1', 'FBtr0332685_exon_1'] 2021-10-25 09:34:37.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12258851, 12290208), (12282249, 12290208), (12290358, 12294007), (12294559, 12300478), (12300636, 12300884)] 2021-10-25 09:34:37.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037064: ['FBtr0078415'] 2021-10-25 09:34:37.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037064 has a single transcript. 2021-10-25 09:34:37.532 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082564': ['FBtr0331183']} 2021-10-25 09:34:37.533 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331183']] 2021-10-25 09:34:37.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037065: ['FBtr0078410', 'FBtr0078411', 'FBtr0332860', 'FBtr0345804'] 2021-10-25 09:34:37.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9975844, 10003583), (10004101, 10033182), (10033424, 10036645), (10036856, 10037343), (10037471, 10040855), (10041024, 10071661), (10041024, 10113187), (10041024, 10138855), (10041024, 10071643)] 2021-10-25 09:34:37.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033439: ['FBtr0088467'] 2021-10-25 09:34:37.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033439 has a single transcript. 2021-10-25 09:34:37.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033440: ['FBtr0088468'] 2021-10-25 09:34:37.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033440 has a single transcript. 2021-10-25 09:34:37.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033442: ['FBtr0088496', 'FBtr0336936'] 2021-10-25 09:34:37.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21282518, 21282580), (21282654, 21283145), (21283477, 21284181), (21284470, 21285054), (21284470, 21285647), (21284470, 21284688), (21285740, 21285813)] 2021-10-25 09:34:37.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9757746, 9757814)] 2021-10-25 09:34:37.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003654: ['FBtr0089401', 'FBtr0089407', 'FBtr0089406', 'FBtr0089399', 'FBtr0089397', 'FBtr0089404', 'FBtr0089405', 'FBtr0089409', 'FBtr0089398', 'FBtr0089408', 'FBtr0089403', 'FBtr0089402', 'FBtr0089400', 'FBtr0340360', 'FBtr0340361'] 2021-10-25 09:34:37.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085412: ['FBtr0112622', 'FBtr0112623', 'FBtr0112624', 'FBtr0290011', 'FBtr0329897', 'FBtr0329898', 'FBtr0329899', 'FBtr0334567', 'FBtr0334568', 'FBtr0334569'] 2021-10-25 09:34:37.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033443: ['FBtr0088474', 'FBtr0336935'] 2021-10-25 09:34:37.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262126: ['FBtr0329964', 'FBtr0329965', 'FBtr0077810'] 2021-10-25 09:34:37.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9793567, 9795427), (9795894, 9796297), (9796529, 9796584), (9796959, 9797011), (9797655, 9797720)] 2021-10-25 09:34:37.724 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9793325, 9795894, 'FBtr0088474_exon_1') contains intron (9793567, 9795427) 2021-10-25 09:34:37.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088474_exon_1'] 2021-10-25 09:34:37.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040827: ['FBtr0076530', 'FBtr0340709'] 2021-10-25 09:34:37.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037067: ['FBtr0078409'] 2021-10-25 09:34:37.746 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037067 has a single transcript. 2021-10-25 09:34:37.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037068: ['FBtr0078337', 'FBtr0333394'] 2021-10-25 09:34:37.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:37.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2232188, 2232256), (2233047, 2233109), (2233977, 2234234), (2234350, 2234408), (2234868, 2234927), (2235899, 2236307)] 2021-10-25 09:34:37.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033446: ['FBtr0088493', 'FBtr0088494', 'FBtr0339403'] 2021-10-25 09:34:37.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5340321, 5341180), (5341697, 5351828), (5353004, 5376047), (5353004, 5355946), (5356048, 5376047), (5358721, 5376047), (5365913, 5376047), (5376184, 5378301), (5376193, 5378301), (5378521, 5378629), (5378725, 5383062), (5378731, 5383062), (5383379, 5383541), (5383646, 5394052), (5383646, 5388241), (5388377, 5396183), (5394188, 5396183), (5396294, 5396472), (5396600, 5398064), (5398134, 5398403), (5398505, 5398589), (5398762, 5399693), (5398762, 5399531), (5398762, 5399534), (5398762, 5399659), (5398762, 5403339)] 2021-10-25 09:34:37.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.794 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21295577, 21295660)] 2021-10-25 09:34:37.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.799 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329965': ['FBtr0077810']} 2021-10-25 09:34:37.800 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0077810']] 2021-10-25 09:34:37.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040828: ['FBtr0076592'] 2021-10-25 09:34:37.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040828 has a single transcript. 2021-10-25 09:34:37.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040832: ['FBtr0076699', 'FBtr0307388'] 2021-10-25 09:34:37.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037069: ['FBtr0078338'] 2021-10-25 09:34:37.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037069 has a single transcript. 2021-10-25 09:34:37.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262127: ['FBtr0344383', 'FBtr0100008'] 2021-10-25 09:34:37.853 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0300467': ['FBtr0344555'], 'FBtr0331603': ['FBtr0344556'], 'FBtr0301951': ['FBtr0344558'], 'FBtr0301952': ['FBtr0344557']} 2021-10-25 09:34:37.853 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344555'], ['FBtr0344556'], ['FBtr0344558'], ['FBtr0344557']] 2021-10-25 09:34:37.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037070: ['FBtr0078406', 'FBtr0078407', 'FBtr0321282', 'FBtr0321283', 'FBtr0331798', 'FBtr0345883'] 2021-10-25 09:34:37.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9811968, 9812481), (9812664, 9819839), (9812664, 9812723)] 2021-10-25 09:34:37.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8215531, 8215599)] 2021-10-25 09:34:37.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14699340, 14699400), (14699610, 14699677), (14699798, 14699860), (14700172, 14700244), (14700638, 14700708), (14700889, 14700955), (14702585, 14702890), (14703189, 14723310)] 2021-10-25 09:34:37.892 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13715819, 13721825), (13721844, 13734512), (13721844, 13745640), (13734584, 13745640), (13735623, 13744845), (13735623, 13744783), (13744995, 13745640), (13747963, 13749365), (13750446, 13752243), (13750446, 13755081), (13750446, 13756375), (13755606, 13756375), (13755914, 13756375), (13756662, 13757182), (13756662, 13756889), (13757027, 13757182), (13757476, 13757552), (13757476, 13757558), (13757783, 13758457), (13759783, 13759843), (13760026, 13760086), (13760026, 13760095), (13760179, 13760244), (13760362, 13762700), (13760362, 13760685), (13760362, 13761307), (13761767, 13762700), (13761777, 13762700)] 2021-10-25 09:34:37.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040837: ['FBtr0076918', 'FBtr0273402'] 2021-10-25 09:34:37.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262139: ['FBtr0330146', 'FBtr0330147', 'FBtr0304120', 'FBtr0304121', 'FBtr0304122', 'FBtr0333901', 'FBtr0333902'] 2021-10-25 09:34:37.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033447: ['FBtr0309879', 'FBtr0309880', 'FBtr0339409'] 2021-10-25 09:34:37.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20229072, 20229139), (20230062, 20230440), (20230593, 20233422), (20230593, 20232116), (20230596, 20233422), (20230596, 20232116), (20230617, 20234774), (20230617, 20233422), (20230617, 20232116), (20232164, 20234774), (20232164, 20233422), (20233443, 20234774), (20233443, 20234327), (20234360, 20234774), (20234390, 20234774), (20234902, 20235287), (20235434, 20235508), (20235746, 20236082), (20235746, 20235807), (20235746, 20235803), (20235950, 20236082)] 2021-10-25 09:34:37.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7158514, 7158578)] 2021-10-25 09:34:37.982 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7158099, 7158874, 'FBtr0273402_exon_1') contains intron (7158514, 7158578) 2021-10-25 09:34:37.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273402_exon_1'] 2021-10-25 09:34:37.982 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:37.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21303549, 21303807), (21303549, 21303909), (21303837, 21303909), (21304091, 21304387), (21304091, 21304608), (21304091, 21304289)] 2021-10-25 09:34:37.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:37.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040842: ['FBtr0077163'] 2021-10-25 09:34:38.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040842 has a single transcript. 2021-10-25 09:34:38.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040843: ['FBtr0077182'] 2021-10-25 09:34:38.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040843 has a single transcript. 2021-10-25 09:34:38.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9823591, 9823647), (9824303, 9824504), (9824925, 9824988), (9825126, 9825188), (9825306, 9825364), (9826523, 9826583), (9826760, 9826813), (9827035, 9827098)] 2021-10-25 09:34:38.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9825364, 9826760, 'FBtr0309879_exon_3') contains intron (9826523, 9826583) 2021-10-25 09:34:38.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9825364, 9826760, 'FBtr0309880_exon_2') contains intron (9826523, 9826583) 2021-10-25 09:34:38.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9826813, 9827206, 'FBtr0309880_exon_1') contains intron (9827035, 9827098) 2021-10-25 09:34:38.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309879_exon_3', 'FBtr0309880_exon_2', 'FBtr0309880_exon_1'] 2021-10-25 09:34:38.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040849: ['FBtr0336974'] 2021-10-25 09:34:38.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040849 has a single transcript. 2021-10-25 09:34:38.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040850: ['FBtr0073377'] 2021-10-25 09:34:38.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040850 has a single transcript. 2021-10-25 09:34:38.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040859: ['FBtr0073626', 'FBtr0073627', 'FBtr0073628'] 2021-10-25 09:34:38.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12091492, 12091569), (12091518, 12091579), (12091518, 12091569), (12091742, 12091805), (12092070, 12092142), (12092083, 12092142)] 2021-10-25 09:34:38.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(368941, 369002), (369150, 369309), (369416, 369479), (369673, 370606), (369673, 370202), (370289, 370606), (370728, 370905), (370728, 370923), (371215, 371439), (371507, 373659), (373895, 376418), (373895, 383578), (383626, 383790), (383823, 391485), (391793, 392108)] 2021-10-25 09:34:38.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033448: ['FBtr0088486', 'FBtr0088487', 'FBtr0088490', 'FBtr0113061'] 2021-10-25 09:34:38.161 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330146': ['FBtr0304120']} 2021-10-25 09:34:38.161 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0304120']] 2021-10-25 09:34:38.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037071: ['FBtr0078339', 'FBtr0321281'] 2021-10-25 09:34:38.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040871: ['FBtr0073869'] 2021-10-25 09:34:38.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040871 has a single transcript. 2021-10-25 09:34:38.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9829859, 9836442), (9829859, 9833478), (9829859, 9833508), (9829859, 9831287)] 2021-10-25 09:34:38.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040877: ['FBtr0074438'] 2021-10-25 09:34:38.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040877 has a single transcript. 2021-10-25 09:34:38.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029762: ['FBtr0070797'] 2021-10-25 09:34:38.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029762 has a single transcript. 2021-10-25 09:34:38.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040890: ['FBtr0300214'] 2021-10-25 09:34:38.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040890 has a single transcript. 2021-10-25 09:34:38.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029763: ['FBtr0070773', 'FBtr0070772', 'FBtr0070775', 'FBtr0340461', 'FBtr0340462'] 2021-10-25 09:34:38.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040892: ['FBtr0110804'] 2021-10-25 09:34:38.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040892 has a single transcript. 2021-10-25 09:34:38.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21304965, 21305078), (21305019, 21305078)] 2021-10-25 09:34:38.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040899: ['FBtr0070390', 'FBtr0345607'] 2021-10-25 09:34:38.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037073: ['FBtr0078342'] 2021-10-25 09:34:38.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037073 has a single transcript. 2021-10-25 09:34:38.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085413: ['FBtr0344342', 'FBtr0112625', 'FBtr0302036', 'FBtr0304918', 'FBtr0304919', 'FBtr0304920'] 2021-10-25 09:34:38.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037074: ['FBtr0078404', 'FBtr0331797'] 2021-10-25 09:34:38.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040900: ['FBtr0290085', 'FBtr0342764'] 2021-10-25 09:34:38.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262140: ['FBtr0304123'] 2021-10-25 09:34:38.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262140 has a single transcript. 2021-10-25 09:34:38.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5421667, 5422579), (5422126, 5422579), (5422266, 5422579), (5422502, 5422579), (5423017, 5423118), (5423750, 5423814), (5424962, 5425142)] 2021-10-25 09:34:38.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.383 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262141: ['FBtr0304124'] 2021-10-25 09:34:38.386 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262141 has a single transcript. 2021-10-25 09:34:38.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033449: ['FBtr0088477'] 2021-10-25 09:34:38.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033449 has a single transcript. 2021-10-25 09:34:38.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21338658, 21338723), (21338812, 21338869), (21339220, 21339325), (21339555, 21339613), (21339831, 21339895), (21341291, 21341366), (21341515, 21341574), (21342136, 21342193), (21342452, 21342930), (21343097, 21343575)] 2021-10-25 09:34:38.388 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21338869, 21339555, 'FBtr0078404_exon_8') contains intron (21339220, 21339325) 2021-10-25 09:34:38.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078404_exon_8'] 2021-10-25 09:34:38.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033450: ['FBtr0088485'] 2021-10-25 09:34:38.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033450 has a single transcript. 2021-10-25 09:34:38.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262142: ['FBtr0343003'] 2021-10-25 09:34:38.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262142 has a single transcript. 2021-10-25 09:34:38.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033451: ['FBtr0088478'] 2021-10-25 09:34:38.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033451 has a single transcript. 2021-10-25 09:34:38.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262143: ['FBtr0309855'] 2021-10-25 09:34:38.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262143 has a single transcript. 2021-10-25 09:34:38.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033453: ['FBtr0345019', 'FBtr0345020'] 2021-10-25 09:34:38.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262144: ['FBtr0309854'] 2021-10-25 09:34:38.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262144 has a single transcript. 2021-10-25 09:34:38.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262146: ['FBtr0346342', 'FBtr0304129'] 2021-10-25 09:34:38.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2186940, 2187147)] 2021-10-25 09:34:38.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.428 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037076: ['FBtr0078403', 'FBtr0305306'] 2021-10-25 09:34:38.460 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9842840, 9843736), (9843903, 9843959), (9844408, 9844460), (9844565, 9844621), (9844904, 9844989), (9845221, 9845327)] 2021-10-25 09:34:38.461 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.472 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7815458, 7818819), (7818933, 7836701), (7822208, 7836701), (7836782, 7843734), (7844583, 7844737), (7845282, 7845385), (7846298, 7846365), (7846500, 7846673), (7847117, 7847497), (7847117, 7847500), (7847117, 7847428), (7847749, 7847821), (7848148, 7849234), (7848148, 7851298), (7849357, 7851298), (7851509, 7851583), (7852779, 7852937)] 2021-10-25 09:34:38.472 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20534529, 20534609)] 2021-10-25 09:34:38.473 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7847500, 7848148, 'FBtr0344342_exon_9') contains intron (7847749, 7847821) 2021-10-25 09:34:38.473 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7847497, 7848148, 'FBtr0112625_exon_9') contains intron (7847749, 7847821) 2021-10-25 09:34:38.473 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.473 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.473 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7847497, 7848148, 'FBtr0302036_exon_8') contains intron (7847749, 7847821) 2021-10-25 09:34:38.473 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7847428, 7848148, 'FBtr0304918_exon_9') contains intron (7847749, 7847821) 2021-10-25 09:34:38.474 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7847497, 7848148, 'FBtr0304920_exon_9') contains intron (7847749, 7847821) 2021-10-25 09:34:38.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344342_exon_9', 'FBtr0112625_exon_9', 'FBtr0302036_exon_8', 'FBtr0304918_exon_9', 'FBtr0304920_exon_9'] 2021-10-25 09:34:38.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040904: ['FBtr0070660'] 2021-10-25 09:34:38.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040904 has a single transcript. 2021-10-25 09:34:38.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21346075, 21346688), (21346954, 21349041), (21346954, 21347037)] 2021-10-25 09:34:38.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040905: ['FBtr0070659'] 2021-10-25 09:34:38.493 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040905 has a single transcript. 2021-10-25 09:34:38.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040906: ['FBtr0070657', 'FBtr0345707'] 2021-10-25 09:34:38.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033454: ['FBtr0088373'] 2021-10-25 09:34:38.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033454 has a single transcript. 2021-10-25 09:34:38.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033457: ['FBtr0088375', 'FBtr0472834'] 2021-10-25 09:34:38.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037078: ['FBtr0306795', 'FBtr0331796'] 2021-10-25 09:34:38.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262148: ['FBtr0304139'] 2021-10-25 09:34:38.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262148 has a single transcript. 2021-10-25 09:34:38.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262149: ['FBtr0304140', 'FBtr0304141'] 2021-10-25 09:34:38.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029765: ['FBtr0070776'] 2021-10-25 09:34:38.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029765 has a single transcript. 2021-10-25 09:34:38.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029766: ['FBtr0070777', 'FBtr0340460'] 2021-10-25 09:34:38.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21355954, 21356139), (21356233, 21356475)] 2021-10-25 09:34:38.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.582 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003655: ['FBtr0070922'] 2021-10-25 09:34:38.584 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003655 has a single transcript. 2021-10-25 09:34:38.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7128297, 7128463), (7128647, 7128702)] 2021-10-25 09:34:38.587 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7128463, 7129067, 'FBtr0304141_exon_2') contains intron (7128647, 7128702) 2021-10-25 09:34:38.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304141_exon_2'] 2021-10-25 09:34:38.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003656: ['FBtr0071125', 'FBtr0071126', 'FBtr0301675'] 2021-10-25 09:34:38.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040907: ['FBtr0070655'] 2021-10-25 09:34:38.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040907 has a single transcript. 2021-10-25 09:34:38.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040918: ['FBtr0070937', 'FBtr0070938'] 2021-10-25 09:34:38.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033458: ['FBtr0088376'] 2021-10-25 09:34:38.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033458 has a single transcript. 2021-10-25 09:34:38.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033459: ['FBtr0088377', 'FBtr0088378'] 2021-10-25 09:34:38.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037081: ['FBtr0078399', 'FBtr0078400'] 2021-10-25 09:34:38.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262150: ['FBtr0342643', 'FBtr0304142'] 2021-10-25 09:34:38.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7957798, 7957865), (7958210, 7958270), (7958482, 7959995), (7958482, 7958977), (7959094, 7961176), (7960112, 7961176), (7961363, 7961438), (7961714, 7961805), (7962224, 7962569), (7963141, 7963207), (7964142, 7964217), (7964949, 7967439)] 2021-10-25 09:34:38.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6258506, 6258649), (6258794, 6258896), (6259234, 6259311), (6259533, 6259603), (6259724, 6266406), (6266717, 6267003)] 2021-10-25 09:34:38.658 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6266406, 6267228, 'FBtr0070938_exon_1') contains intron (6266717, 6267003) 2021-10-25 09:34:38.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.659 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.659 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070938_exon_1'] 2021-10-25 09:34:38.659 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21420857, 21420917), (21421054, 21421105), (21421292, 21421360), (21421527, 21424453), (21424656, 21424717), (21425545, 21432839), (21425545, 21432854)] 2021-10-25 09:34:38.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029768: ['FBtr0070778', 'FBtr0344824', 'FBtr0339781'] 2021-10-25 09:34:38.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9875404, 9875471), (9875959, 9876015)] 2021-10-25 09:34:38.682 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9875280, 9875959, 'FBtr0088377_exon_1') contains intron (9875404, 9875471) 2021-10-25 09:34:38.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15811871, 15811929)] 2021-10-25 09:34:38.683 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088377_exon_1'] 2021-10-25 09:34:38.683 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.683 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.683 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085414: ['FBtr0300553', 'FBtr0335272', 'FBtr0335273'] 2021-10-25 09:34:38.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040922: ['FBtr0071060'] 2021-10-25 09:34:38.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040922 has a single transcript. 2021-10-25 09:34:38.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040923: ['FBtr0071058'] 2021-10-25 09:34:38.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040923 has a single transcript. 2021-10-25 09:34:38.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040928: ['FBtr0445213'] 2021-10-25 09:34:38.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040928 has a single transcript. 2021-10-25 09:34:38.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037082: ['FBtr0078397', 'FBtr0331822'] 2021-10-25 09:34:38.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040929: ['FBtr0332627'] 2021-10-25 09:34:38.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033460: ['FBtr0088451', 'FBtr0339406', 'FBtr0339407'] 2021-10-25 09:34:38.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040929 has a single transcript. 2021-10-25 09:34:38.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262160: ['FBtr0310277', 'FBtr0089956', 'FBtr0336616', 'FBtr0336617'] 2021-10-25 09:34:38.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040931: ['FBtr0071343', 'FBtr0340342'] 2021-10-25 09:34:38.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5446975, 5461695), (5461748, 5478637), (5464878, 5478637), (5464959, 5478637), (5479155, 5480832), (5480963, 5487373), (5487435, 5491531)] 2021-10-25 09:34:38.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003660: ['FBtr0088362', 'FBtr0088363', 'FBtr0273274', 'FBtr0273275', 'FBtr0339455'] 2021-10-25 09:34:38.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5805454, 5846592), (5805454, 5832346), (5832377, 5846592), (5847470, 5852945), (5853070, 5853711), (5853070, 5855514), (5853786, 5855514), (5853801, 5855514), (5855682, 5857170), (5857305, 5857367), (5857581, 5858446), (5858558, 5858623)] 2021-10-25 09:34:38.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21439731, 21439788), (21439740, 21439788), (21440454, 21440512)] 2021-10-25 09:34:38.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.791 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9159848, 9159906)] 2021-10-25 09:34:38.791 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9877237, 9877300), (9877439, 9877492), (9877590, 9877643), (9877876, 9877931), (9878554, 9878658), (9878884, 9878943), (9879443, 9879507), (9879634, 9879695), (9880924, 9880990), (9881216, 9882182), (9881216, 9881879)] 2021-10-25 09:34:38.801 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9879695, 9881216, 'FBtr0088451_exon_2') contains intron (9880924, 9880990) 2021-10-25 09:34:38.802 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9879695, 9881216, 'FBtr0339406_exon_2') contains intron (9880924, 9880990) 2021-10-25 09:34:38.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088451_exon_2', 'FBtr0339406_exon_2'] 2021-10-25 09:34:38.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.829 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13025497, 13027065), (13025497, 13026528), (13025497, 13027344), (13027744, 13027808), (13028539, 13028867), (13028551, 13028867), (13029642, 13029726), (13031394, 13050137), (13050179, 13059216)] 2021-10-25 09:34:38.830 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037084: ['FBtr0088102', 'FBtr0088103', 'FBtr0088104'] 2021-10-25 09:34:38.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040941: ['FBtr0300073', 'FBtr0332897'] 2021-10-25 09:34:38.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029769: ['FBtr0346263', 'FBtr0346264'] 2021-10-25 09:34:38.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10249827, 10250878), (10249827, 10250368), (10250586, 10250878), (10251144, 10251927), (10251213, 10251927), (10251984, 10252281), (10251984, 10252074)] 2021-10-25 09:34:38.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085415: ['FBtr0112627', 'FBtr0345644'] 2021-10-25 09:34:38.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10218377, 10219072), (10218377, 10219017)] 2021-10-25 09:34:38.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5495772, 5495836)] 2021-10-25 09:34:38.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11219712, 11220463), (11220358, 11220463), (11220621, 11220927), (11221629, 11221783)] 2021-10-25 09:34:38.907 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11219933, 11220621, 'FBtr0088102_exon_1') contains intron (11220358, 11220463) 2021-10-25 09:34:38.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088102_exon_1'] 2021-10-25 09:34:38.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033461: ['FBtr0088379', 'FBtr0331953'] 2021-10-25 09:34:38.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18062939, 18089961), (18090665, 18092551), (18092798, 18092862), (18093066, 18093128)] 2021-10-25 09:34:38.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.934 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040942: ['FBtr0071481'] 2021-10-25 09:34:38.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040942 has a single transcript. 2021-10-25 09:34:38.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040949: ['FBtr0079241'] 2021-10-25 09:34:38.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040949 has a single transcript. 2021-10-25 09:34:38.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029770: ['FBtr0070779', 'FBtr0345786'] 2021-10-25 09:34:38.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040950: ['FBtr0079203'] 2021-10-25 09:34:38.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040950 has a single transcript. 2021-10-25 09:34:38.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040958: ['FBtr0079714', 'FBtr0331993', 'FBtr0331994'] 2021-10-25 09:34:38.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262163: ['FBtr0304150'] 2021-10-25 09:34:38.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262163 has a single transcript. 2021-10-25 09:34:38.991 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:38.991 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:38.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:38.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262166: ['FBtr0087246', 'FBtr0087245'] 2021-10-25 09:34:39.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037085: ['FBtr0078394', 'FBtr0332718'] 2021-10-25 09:34:39.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085417: ['FBtr0112629', 'FBtr0301081'] 2021-10-25 09:34:39.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033463: ['FBtr0088450', 'FBtr0302176', 'FBtr0331955'] 2021-10-25 09:34:39.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8394798, 8394871), (8394804, 8394871)] 2021-10-25 09:34:39.028 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16195657, 16195716), (16195970, 16196066), (16196000, 16196066)] 2021-10-25 09:34:39.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029771: ['FBtr0070780', 'FBtr0345785'] 2021-10-25 09:34:39.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21484950, 21489091), (21490050, 21490479)] 2021-10-25 09:34:39.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14419321, 14420529), (14420903, 14420969), (14420903, 14420972)] 2021-10-25 09:34:39.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003676: ['FBtr0084290', 'FBtr0084291'] 2021-10-25 09:34:39.082 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9883843, 9883896), (9884002, 9884084), (9884206, 9884621), (9884708, 9884765), (9884901, 9884962), (9885137, 9885199), (9885301, 9885360), (9885512, 9885572), (9885980, 9886930), (9885980, 9886199), (9887054, 9887165), (9887409, 9888736), (9888814, 9888887), (9889124, 9889606), (9889735, 9891234)] 2021-10-25 09:34:39.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9883896, 9884206, 'FBtr0302176_exon_8') contains intron (9884002, 9884084) 2021-10-25 09:34:39.083 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302176_exon_8'] 2021-10-25 09:34:39.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5517498, 5517571), (5517844, 5518043)] 2021-10-25 09:34:39.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262167: ['FBtr0084645', 'FBtr0334335'] 2021-10-25 09:34:39.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037086: ['FBtr0078393'] 2021-10-25 09:34:39.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037086 has a single transcript. 2021-10-25 09:34:39.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037087: ['FBtr0078353', 'FBtr0332711'] 2021-10-25 09:34:39.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085419: ['FBtr0112633', 'FBtr0340386'] 2021-10-25 09:34:39.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040959: ['FBtr0079713'] 2021-10-25 09:34:39.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040959 has a single transcript. 2021-10-25 09:34:39.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22489858, 22489921), (22490812, 22490867), (22491021, 22491258), (22491351, 22491415)] 2021-10-25 09:34:39.131 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22491258, 22491439, 'FBtr0084291_exon_1') contains intron (22491351, 22491415) 2021-10-25 09:34:39.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084291_exon_1'] 2021-10-25 09:34:39.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040963: ['FBtr0079760'] 2021-10-25 09:34:39.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040963 has a single transcript. 2021-10-25 09:34:39.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24530914, 24530991), (24532601, 24532678), (24532802, 24532858)] 2021-10-25 09:34:39.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029778: ['FBtr0070784', 'FBtr0070785'] 2021-10-25 09:34:39.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040964: ['FBtr0079763', 'FBtr0303880'] 2021-10-25 09:34:39.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21493196, 21493247), (21493355, 21493446), (21493355, 21493419)] 2021-10-25 09:34:39.161 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18540293, 18543913), (18540293, 18543910), (18544063, 18544119), (18545252, 18545322), (18545724, 18545890), (18545724, 18545896), (18546181, 18546256), (18546357, 18546849)] 2021-10-25 09:34:39.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8997668, 8997761), (8997668, 8997722)] 2021-10-25 09:34:39.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5617028, 5617120), (5617056, 5617120), (5617226, 5617308), (5617786, 5617857), (5618480, 5618565)] 2021-10-25 09:34:39.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033464: ['FBtr0088448', 'FBtr0088449'] 2021-10-25 09:34:39.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003683: ['FBtr0075112'] 2021-10-25 09:34:39.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003683 has a single transcript. 2021-10-25 09:34:39.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262169: ['FBtr0088401', 'FBtr0113062', 'FBtr0088402', 'FBtr0088399'] 2021-10-25 09:34:39.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003687: ['FBtr0071679'] 2021-10-25 09:34:39.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003687 has a single transcript. 2021-10-25 09:34:39.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037090: ['FBtr0078354'] 2021-10-25 09:34:39.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037090 has a single transcript. 2021-10-25 09:34:39.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003701: ['FBtr0086825', 'FBtr0340283'] 2021-10-25 09:34:39.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037092: ['FBtr0078356', 'FBtr0339793', 'FBtr0332712', 'FBtr0332713', 'FBtr0332714', 'FBtr0332715'] 2021-10-25 09:34:39.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085420: ['FBtr0290012', 'FBtr0333611', 'FBtr0333612'] 2021-10-25 09:34:39.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9899279, 9899349), (9900393, 9900512), (9900676, 9900775), (9900869, 9900975), (9901151, 9903164), (9901154, 9903164)] 2021-10-25 09:34:39.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040965: ['FBtr0344476'] 2021-10-25 09:34:39.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040965 has a single transcript. 2021-10-25 09:34:39.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029783: ['FBtr0070850', 'FBtr0070851', 'FBtr0070852'] 2021-10-25 09:34:39.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040967: ['FBtr0080160'] 2021-10-25 09:34:39.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040967 has a single transcript. 2021-10-25 09:34:39.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040968: ['FBtr0080274', 'FBtr0344127'] 2021-10-25 09:34:39.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17864447, 17864505), (17865495, 17865550)] 2021-10-25 09:34:39.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:39.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5424275, 5429162), (5429628, 5431631), (5431738, 5433021), (5433226, 5433290), (5433452, 5433726), (5433855, 5435587), (5435678, 5436228), (5436312, 5436522), (5436632, 5437712), (5437775, 5439189), (5439471, 5439530)] 2021-10-25 09:34:39.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033465: ['FBtr0088384', 'FBtr0308338'] 2021-10-25 09:34:39.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10052635, 10057048), (10052919, 10057048), (10057343, 10060222), (10060382, 10060686), (10061189, 10061249), (10061364, 10061617), (10061364, 10062099), (10061896, 10062099), (10062191, 10062249), (10062530, 10062705), (10062840, 10062899), (10063039, 10063097)] 2021-10-25 09:34:39.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5665486, 5665687), (5665486, 5665541), (5665627, 5665687)] 2021-10-25 09:34:39.322 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5664627, 5665627, 'FBtr0070851_exon_2') contains intron (5665486, 5665541) 2021-10-25 09:34:39.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070851_exon_2'] 2021-10-25 09:34:39.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003710: ['FBtr0073219', 'FBtr0073220'] 2021-10-25 09:34:39.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9910914, 9910971), (9911282, 9911393), (9911620, 9911676), (9912248, 9912313), (9912763, 9912827)] 2021-10-25 09:34:39.348 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9910892, 9911282, 'FBtr0088384_exon_1') contains intron (9910914, 9910971) 2021-10-25 09:34:39.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088384_exon_1'] 2021-10-25 09:34:39.348 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040972: ['FBtr0307212'] 2021-10-25 09:34:39.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040972 has a single transcript. 2021-10-25 09:34:39.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21508267, 21511090), (21508267, 21508749), (21508267, 21510067), (21508945, 21511090), (21508945, 21510067), (21510280, 21511090), (21511250, 21511308), (21511613, 21511669)] 2021-10-25 09:34:39.362 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21511308, 21512749, 'FBtr0339793_exon_3') contains intron (21511613, 21511669) 2021-10-25 09:34:39.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339793_exon_3'] 2021-10-25 09:34:39.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040973: ['FBtr0113336'] 2021-10-25 09:34:39.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040973 has a single transcript. 2021-10-25 09:34:39.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4188628, 4189675), (4188774, 4189675), (4191886, 4192191)] 2021-10-25 09:34:39.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040984: ['FBtr0080835', 'FBtr0337080'] 2021-10-25 09:34:39.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033467: ['FBtr0088441'] 2021-10-25 09:34:39.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033467 has a single transcript. 2021-10-25 09:34:39.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16330019, 16330078)] 2021-10-25 09:34:39.409 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029785: ['FBtr0070800', 'FBtr0070801', 'FBtr0345788'] 2021-10-25 09:34:39.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033468: ['FBtr0088440'] 2021-10-25 09:34:39.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033468 has a single transcript. 2021-10-25 09:34:39.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085421: ['FBtr0112636', 'FBtr0329849', 'FBtr0329850', 'FBtr0329851'] 2021-10-25 09:34:39.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033469: ['FBtr0339424'] 2021-10-25 09:34:39.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033469 has a single transcript. 2021-10-25 09:34:39.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003714: ['FBtr0070459', 'FBtr0308831'] 2021-10-25 09:34:39.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033471: ['FBtr0088388', 'FBtr0088389'] 2021-10-25 09:34:39.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262170: ['FBtr0304652'] 2021-10-25 09:34:39.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262170 has a single transcript. 2021-10-25 09:34:39.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262351: ['FBtr0304634', 'FBtr0304635'] 2021-10-25 09:34:39.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2442732, 2443733), (2443665, 2443733)] 2021-10-25 09:34:39.467 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040985: ['FBtr0080959', 'FBtr0345447'] 2021-10-25 09:34:39.467 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5672522, 5672997), (5672875, 5672997), (5673134, 5673216)] 2021-10-25 09:34:39.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9971421, 9971476), (9972443, 9972500)] 2021-10-25 09:34:39.479 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9971142, 9972443, 'FBtr0088389_exon_1') contains intron (9971421, 9971476) 2021-10-25 09:34:39.480 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088389_exon_1'] 2021-10-25 09:34:39.480 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6762774, 6762833), (6763183, 6763466), (6763600, 6763820), (6763991, 6764050), (6764304, 6764374), (6764736, 6765535), (6765697, 6765934), (6766111, 6767050), (6767195, 6767414), (6767560, 6768121), (6768314, 6768368), (6768510, 6768578), (6768665, 6768925), (6769023, 6769307), (6769359, 6773639), (6769359, 6769431), (6773786, 6792315), (6773786, 6788461), (6773786, 6776349), (6792410, 6792478), (6792621, 6796905), (6797412, 6798769)] 2021-10-25 09:34:39.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16887677, 16887792)] 2021-10-25 09:34:39.508 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18925387, 18925435), (18925387, 18925453), (18925585, 18925813)] 2021-10-25 09:34:39.513 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.513 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003716: ['FBtr0079087', 'FBtr0079088', 'FBtr0079089', 'FBtr0079086'] 2021-10-25 09:34:39.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033473: ['FBtr0088393', 'FBtr0088394'] 2021-10-25 09:34:39.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040989: ['FBtr0081026'] 2021-10-25 09:34:39.564 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0040989 has a single transcript. 2021-10-25 09:34:39.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262352: ['FBtr0304630'] 2021-10-25 09:34:39.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262352 has a single transcript. 2021-10-25 09:34:39.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040992: ['FBtr0081122', 'FBtr0345442', 'FBtr0343834'] 2021-10-25 09:34:39.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029789: ['FBtr0070847'] 2021-10-25 09:34:39.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029789 has a single transcript. 2021-10-25 09:34:39.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262353: ['FBtr0334410'] 2021-10-25 09:34:39.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10026875, 10026950), (10027643, 10027707)] 2021-10-25 09:34:39.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262353 has a single transcript. 2021-10-25 09:34:39.588 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10026838, 10027643, 'FBtr0088393_exon_1') contains intron (10026875, 10026950) 2021-10-25 09:34:39.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088393_exon_1'] 2021-10-25 09:34:39.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029791: ['FBtr0301083', 'FBtr0301084'] 2021-10-25 09:34:39.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262354: ['FBtr0304632'] 2021-10-25 09:34:39.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262354 has a single transcript. 2021-10-25 09:34:39.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037093: ['FBtr0078357', 'FBtr0078358', 'FBtr0332716'] 2021-10-25 09:34:39.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262355: ['FBtr0343811'] 2021-10-25 09:34:39.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262355 has a single transcript. 2021-10-25 09:34:39.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5221400, 5221462), (5221650, 5236335), (5221650, 5241368), (5241506, 5271265), (5241506, 5243981), (5241506, 5242218)] 2021-10-25 09:34:39.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262356: ['FBtr0304636'] 2021-10-25 09:34:39.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262356 has a single transcript. 2021-10-25 09:34:39.631 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5699172, 5703002), (5699258, 5703002), (5703604, 5703655), (5703775, 5703829), (5704389, 5704446), (5704545, 5704610), (5704724, 5706508), (5706655, 5706744), (5707310, 5707372), (5707500, 5707556), (5707500, 5707560), (5707934, 5707986), (5708164, 5708221)] 2021-10-25 09:34:39.632 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.632 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262357: ['FBtr0304637'] 2021-10-25 09:34:39.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262357 has a single transcript. 2021-10-25 09:34:39.643 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18810684, 18810818)] 2021-10-25 09:34:39.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262358: ['FBtr0304638'] 2021-10-25 09:34:39.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262358 has a single transcript. 2021-10-25 09:34:39.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262359: ['FBtr0304640', 'FBtr0332368'] 2021-10-25 09:34:39.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033474: ['FBtr0088435', 'FBtr0088436', 'FBtr0330325', 'FBtr0339418', 'FBtr0339419', 'FBtr0339420', 'FBtr0300719'] 2021-10-25 09:34:39.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085422: ['FBtr0112637', 'FBtr0340590'] 2021-10-25 09:34:39.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21516654, 21517249), (21517790, 21517845), (21518699, 21518757), (21518917, 21519110), (21520338, 21520401), (21520790, 21521081), (21521555, 21521621)] 2021-10-25 09:34:39.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029795: ['FBtr0070806', 'FBtr0308572'] 2021-10-25 09:34:39.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8243704, 8243758), (8243868, 8243918)] 2021-10-25 09:34:39.704 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3175398, 3183315), (3183482, 3184876), (3185078, 3185271), (3185536, 3188581), (3188725, 3189363), (3189495, 3189978), (3190119, 3190411), (3190529, 3190601), (3190798, 3191793), (3191907, 3192116), (3192218, 3192463), (3193111, 3200469), (3193111, 3199263)] 2021-10-25 09:34:39.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5733714, 5733913)] 2021-10-25 09:34:39.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040993: ['FBtr0081102', 'FBtr0299685', 'FBtr0345443'] 2021-10-25 09:34:39.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262360: ['FBtr0304641'] 2021-10-25 09:34:39.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262360 has a single transcript. 2021-10-25 09:34:39.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003719: ['FBtr0084691'] 2021-10-25 09:34:39.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003719 has a single transcript. 2021-10-25 09:34:39.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262361: ['FBtr0304642'] 2021-10-25 09:34:39.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262361 has a single transcript. 2021-10-25 09:34:39.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037094: ['FBtr0078359', 'FBtr0078361', 'FBtr0078362', 'FBtr0078363', 'FBtr0078364', 'FBtr0078365', 'FBtr0078366', 'FBtr0301197', 'FBtr0301198'] 2021-10-25 09:34:39.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003720: ['FBtr0085709'] 2021-10-25 09:34:39.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003720 has a single transcript. 2021-10-25 09:34:39.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085423: ['FBtr0112638', 'FBtr0112639', 'FBtr0112641', 'FBtr0332409', 'FBtr0306333', 'FBtr0306335'] 2021-10-25 09:34:39.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262362: ['FBtr0304643', 'FBtr0304644'] 2021-10-25 09:34:39.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029798: ['FBtr0070807', 'FBtr0332398'] 2021-10-25 09:34:39.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003721: ['FBtr0089957', 'FBtr0089967', 'FBtr0089968', 'FBtr0089965', 'FBtr0089959', 'FBtr0089960', 'FBtr0089961', 'FBtr0089962', 'FBtr0089963', 'FBtr0089964', 'FBtr0333917', 'FBtr0333918', 'FBtr0301959', 'FBtr0301960', 'FBtr0305654', 'FBtr0305655', 'FBtr0305656'] 2021-10-25 09:34:39.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18813143, 18813297)] 2021-10-25 09:34:39.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10029057, 10031084), (10030258, 10031084), (10031214, 10031283), (10031419, 10031579), (10031419, 10031588), (10031446, 10031579), (10031446, 10031588), (10031826, 10032018), (10032125, 10032213), (10032335, 10032393)] 2021-10-25 09:34:39.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10031283, 10031826, 'FBtr0300719_exon_4') contains intron (10031419, 10031579) 2021-10-25 09:34:39.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300719_exon_4'] 2021-10-25 09:34:39.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8041259, 8041332), (8041646, 8055253)] 2021-10-25 09:34:39.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5748918, 5748993), (5749541, 5749736), (5750400, 5750461), (5750604, 5750848), (5750978, 5751063), (5751273, 5751341)] 2021-10-25 09:34:39.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.854 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088435': ['FBtr0330325']} 2021-10-25 09:34:39.855 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330325']] 2021-10-25 09:34:39.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262363: ['FBtr0304645'] 2021-10-25 09:34:39.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262363 has a single transcript. 2021-10-25 09:34:39.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262364: ['FBtr0304646'] 2021-10-25 09:34:39.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262364 has a single transcript. 2021-10-25 09:34:39.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029799: ['FBtr0070808', 'FBtr0339743'] 2021-10-25 09:34:39.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262365: ['FBtr0304647'] 2021-10-25 09:34:39.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262365 has a single transcript. 2021-10-25 09:34:39.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262366: ['FBtr0304649', 'FBtr0345119'] 2021-10-25 09:34:39.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0040996: ['FBtr0081351', 'FBtr0339232', 'FBtr0346419'] 2021-10-25 09:34:39.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3360928, 3360995), (3361443, 3362998), (3361443, 3362442), (3361443, 3362415), (3362718, 3362998), (3363195, 3363306), (3363437, 3363509), (3363762, 3363826), (3364940, 3365018), (3364940, 3365426), (3365673, 3367244), (3365676, 3367244), (3367719, 3367903), (3367719, 3372778), (3368194, 3369115), (3368194, 3370905), (3368194, 3372778)] 2021-10-25 09:34:39.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5752682, 5752863), (5752761, 5752863)] 2021-10-25 09:34:39.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:39.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21523229, 21524692), (21523229, 21524721), (21523298, 21524692), (21523298, 21524721), (21523400, 21524721), (21523605, 21524721), (21523627, 21524721), (21524067, 21524721), (21525716, 21525983), (21526936, 21527183)] 2021-10-25 09:34:39.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21523185, 21525716, 'FBtr0301197_exon_1') contains intron (21523229, 21524692) 2021-10-25 09:34:39.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301197_exon_1'] 2021-10-25 09:34:39.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:39.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20294787, 20294877)] 2021-10-25 09:34:39.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:39.982 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029800: ['FBtr0070840', 'FBtr0339744'] 2021-10-25 09:34:40.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262467: ['FBtr0079052'] 2021-10-25 09:34:40.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262467 has a single transcript. 2021-10-25 09:34:40.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262473: ['FBtr0085059', 'FBtr0330154', 'FBtr0330155'] 2021-10-25 09:34:40.058 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5754356, 5754436), (5754541, 5754615), (5754789, 5754844)] 2021-10-25 09:34:40.059 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.059 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033475: ['FBtr0088395'] 2021-10-25 09:34:40.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033475 has a single transcript. 2021-10-25 09:34:40.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033476: ['FBtr0088434', 'FBtr0339416', 'FBtr0345629', 'FBtr0345630'] 2021-10-25 09:34:40.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041004: ['FBtr0111249', 'FBtr0111247', 'FBtr0111244', 'FBtr0111246', 'FBtr0111245', 'FBtr0111248', 'FBtr0306549', 'FBtr0306550'] 2021-10-25 09:34:40.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26799480, 26826575), (26799480, 26806356), (26806425, 26826575), (26826696, 26837718), (26838956, 26839073)] 2021-10-25 09:34:40.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.114 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085059': ['FBtr0330154']} 2021-10-25 09:34:40.115 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330154']] 2021-10-25 09:34:40.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029801: ['FBtr0070809', 'FBtr0345789', 'FBtr0303290'] 2021-10-25 09:34:40.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10037771, 10038179), (10038512, 10038580), (10038928, 10039172), (10039343, 10039403), (10039572, 10039625), (10039849, 10039967), (10039849, 10048250)] 2021-10-25 09:34:40.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085424: ['FBtr0112642', 'FBtr0112643', 'FBtr0342628'] 2021-10-25 09:34:40.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5756204, 5757861), (5756851, 5757861), (5758347, 5758404)] 2021-10-25 09:34:40.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262475: ['FBtr0304856', 'FBtr0304858', 'FBtr0304859', 'FBtr0304860', 'FBtr0304861', 'FBtr0304862', 'FBtr0304863', 'FBtr0304864', 'FBtr0332232', 'FBtr0332233', 'FBtr0332234'] 2021-10-25 09:34:40.190 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15281598, 15284612), (15281603, 15284612), (15281853, 15284612), (15281857, 15284612), (15284762, 15285228), (15285354, 15286473), (15285354, 15295112), (15286564, 15288252), (15286564, 15287323), (15287821, 15288252), (15288102, 15288252), (15289439, 15295112), (15291525, 15295112), (15295246, 15296590), (15295246, 15295426), (15295544, 15300109), (15295544, 15299276), (15296708, 15299276), (15299347, 15300746), (15300180, 15300746), (15300822, 15301010), (15300822, 15301623), (15301073, 15303152), (15301686, 15303152), (15303222, 15307589), (15303222, 15306340), (15303222, 15303640), (15303222, 15308030), (15303222, 15305177)] 2021-10-25 09:34:40.192 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15288011, 15289439, 'FBtr0089962_exon_1') contains intron (15288102, 15288252) 2021-10-25 09:34:40.193 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15295112, 15295516, 'FBtr0305655_exon_4') contains intron (15295246, 15295426) 2021-10-25 09:34:40.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089962_exon_1', 'FBtr0305655_exon_4'] 2021-10-25 09:34:40.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12588052, 12593624), (12594670, 12613675), (12614212, 12622974), (12619125, 12622974), (12623019, 12625454), (12627183, 12627423)] 2021-10-25 09:34:40.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22844408, 22844467), (22844847, 22848969), (22844847, 22849213), (22849092, 22849213), (22849255, 22849305), (22849255, 22849323), (22849373, 22849428), (22849632, 22849692), (22849770, 22854186)] 2021-10-25 09:34:40.267 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22844219, 22844847, 'FBtr0111249_exon_1') contains intron (22844408, 22844467) 2021-10-25 09:34:40.268 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22844219, 22844847, 'FBtr0111247_exon_1') contains intron (22844408, 22844467) 2021-10-25 09:34:40.268 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22849692, 22854208, 'FBtr0111247_exon_6') contains intron (22849770, 22854186) 2021-10-25 09:34:40.268 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22848969, 22849255, 'FBtr0111244_exon_3') contains intron (22849092, 22849213) 2021-10-25 09:34:40.269 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22844219, 22844847, 'FBtr0111248_exon_1') contains intron (22844408, 22844467) 2021-10-25 09:34:40.269 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22848969, 22849255, 'FBtr0111248_exon_2') contains intron (22849092, 22849213) 2021-10-25 09:34:40.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0111249_exon_1', 'FBtr0111247_exon_1', 'FBtr0111247_exon_6', 'FBtr0111244_exon_3', 'FBtr0111248_exon_1', 'FBtr0111248_exon_2'] 2021-10-25 09:34:40.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029804: ['FBtr0070836'] 2021-10-25 09:34:40.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029804 has a single transcript. 2021-10-25 09:34:40.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029807: ['FBtr0070833'] 2021-10-25 09:34:40.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029807 has a single transcript. 2021-10-25 09:34:40.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033479: ['FBtr0088431'] 2021-10-25 09:34:40.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033479 has a single transcript. 2021-10-25 09:34:40.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029809: ['FBtr0070813'] 2021-10-25 09:34:40.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029809 has a single transcript. 2021-10-25 09:34:40.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033480: ['FBtr0088403', 'FBtr0304041'] 2021-10-25 09:34:40.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029810: ['FBtr0070814'] 2021-10-25 09:34:40.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029810 has a single transcript. 2021-10-25 09:34:40.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029811: ['FBtr0070815'] 2021-10-25 09:34:40.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029811 has a single transcript. 2021-10-25 09:34:40.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029812: ['FBtr0070816'] 2021-10-25 09:34:40.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029812 has a single transcript. 2021-10-25 09:34:40.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085425: ['FBtr0112644', 'FBtr0112645'] 2021-10-25 09:34:40.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029813: ['FBtr0070832'] 2021-10-25 09:34:40.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029813 has a single transcript. 2021-10-25 09:34:40.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037098: ['FBtr0346817', 'FBtr0346818', 'FBtr0346819', 'FBtr0347540'] 2021-10-25 09:34:40.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029814: ['FBtr0070817', 'FBtr0332935'] 2021-10-25 09:34:40.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:40.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21092908, 21093593), (21093685, 21093755), (21093912, 21100214), (21099844, 21099907), (21100065, 21100214)] 2021-10-25 09:34:40.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5818594, 5819014), (5819202, 5834350), (5834480, 5836040), (5836155, 5836729), (5836890, 5836974), (5837114, 5837205)] 2021-10-25 09:34:40.395 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033481: ['FBtr0088404'] 2021-10-25 09:34:40.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033481 has a single transcript. 2021-10-25 09:34:40.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033482: ['FBtr0088428'] 2021-10-25 09:34:40.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033482 has a single transcript. 2021-10-25 09:34:40.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033483: ['FBtr0088405', 'FBtr0088406'] 2021-10-25 09:34:40.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12344550, 12351703), (12348355, 12351703), (12352783, 12358040), (12358261, 12362600), (12358261, 12359600), (12359683, 12362600), (12362649, 12385561), (12366521, 12373582), (12370082, 12385561), (12370082, 12373582), (12374111, 12385561), (12385740, 12389189), (12389670, 12393421), (12389670, 12393390), (12389670, 12391928), (12389670, 12395899), (12392206, 12395899), (12393858, 12395899), (12396040, 12396292)] 2021-10-25 09:34:40.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21544268, 21544325), (21544497, 21544558), (21544623, 21544743), (21545803, 21545877), (21546297, 21546554), (21547388, 21548720), (21547388, 21548082), (21548145, 21548720), (21548852, 21548908), (21551738, 21551799), (21551972, 21552203), (21553593, 21554024), (21554180, 21554553), (21554180, 21554380)] 2021-10-25 09:34:40.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085426: ['FBtr0112646', 'FBtr0342882', 'FBtr0342883', 'FBtr0347186'] 2021-10-25 09:34:40.450 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0346817': ['FBtr0347540']} 2021-10-25 09:34:40.450 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0347540']] 2021-10-25 09:34:40.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029816: ['FBtr0070819'] 2021-10-25 09:34:40.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029816 has a single transcript. 2021-10-25 09:34:40.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029817: ['FBtr0070820', 'FBtr0343536'] 2021-10-25 09:34:40.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10079182, 10081506), (10081632, 10082641), (10082967, 10083029), (10083134, 10083261), (10083326, 10083421), (10083326, 10083403), (10083493, 10083573)] 2021-10-25 09:34:40.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:40.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.504 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.537 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21256303, 21264064), (21256303, 21257258), (21258011, 21264064), (21264533, 21270760), (21270914, 21272169), (21272286, 21276146), (21276461, 21276517), (21276606, 21278394), (21278575, 21278691), (21278825, 21278982), (21278825, 21279798), (21279093, 21279798)] 2021-10-25 09:34:40.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033484: ['FBtr0088407', 'FBtr0088408', 'FBtr0088409', 'FBtr0305653'] 2021-10-25 09:34:40.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037099: ['FBtr0078380'] 2021-10-25 09:34:40.541 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037099 has a single transcript. 2021-10-25 09:34:40.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037100: ['FBtr0078379', 'FBtr0333458'] 2021-10-25 09:34:40.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029818: ['FBtr0070830'] 2021-10-25 09:34:40.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029818 has a single transcript. 2021-10-25 09:34:40.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029819: ['FBtr0070828', 'FBtr0343537'] 2021-10-25 09:34:40.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041087: ['FBtr0088506', 'FBtr0339380'] 2021-10-25 09:34:40.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21559306, 21559794), (21559896, 21559975), (21560135, 21560189), (21560334, 21560397), (21560339, 21560397), (21560472, 21560528), (21560702, 21560941), (21561141, 21561200), (21561291, 21561355), (21561506, 21561790)] 2021-10-25 09:34:40.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5877547, 5877605), (5877805, 5878045), (5879322, 5879376)] 2021-10-25 09:34:40.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10085422, 10090542), (10087604, 10090542), (10087768, 10090542), (10090799, 10093143), (10090799, 10091756), (10091996, 10093143), (10094143, 10094202), (10094634, 10094695), (10094978, 10095048)] 2021-10-25 09:34:40.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9415361, 9416644), (9415361, 9416401), (9416796, 9416857), (9417082, 9417155), (9417335, 9417394), (9417571, 9417632)] 2021-10-25 09:34:40.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037101: ['FBtr0078371'] 2021-10-25 09:34:40.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037101 has a single transcript. 2021-10-25 09:34:40.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037102: ['FBtr0078377'] 2021-10-25 09:34:40.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037102 has a single transcript. 2021-10-25 09:34:40.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037105: ['FBtr0078466'] 2021-10-25 09:34:40.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037105 has a single transcript. 2021-10-25 09:34:40.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037106: ['FBtr0301160', 'FBtr0333391'] 2021-10-25 09:34:40.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029820: ['FBtr0339948', 'FBtr0070821', 'FBtr0345313'] 2021-10-25 09:34:40.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041092: ['FBtr0303870', 'FBtr0303871', 'FBtr0303872', 'FBtr0303873', 'FBtr0304974', 'FBtr0333405'] 2021-10-25 09:34:40.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085427: ['FBtr0112648', 'FBtr0112649', 'FBtr0340259', 'FBtr0340260', 'FBtr0303889', 'FBtr0303890', 'FBtr0303891', 'FBtr0303892', 'FBtr0303893', 'FBtr0303894'] 2021-10-25 09:34:40.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21617690, 21618353), (21617882, 21618353), (21618627, 21618687), (21618975, 21619035), (21619163, 21619224), (21619617, 21619673)] 2021-10-25 09:34:40.745 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5880108, 5880833), (5880669, 5880833), (5881321, 5881385), (5881870, 5881934), (5882235, 5882296), (5882463, 5882526)] 2021-10-25 09:34:40.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033485: ['FBtr0088425'] 2021-10-25 09:34:40.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033485 has a single transcript. 2021-10-25 09:34:40.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037107: ['FBtr0301161', 'FBtr0333393'] 2021-10-25 09:34:40.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033486: ['FBtr0088423', 'FBtr0304926'] 2021-10-25 09:34:40.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21622052, 21622113), (21622284, 21622345), (21622648, 21622724), (21622822, 21622890), (21623160, 21623221), (21623548, 21623690), (21623757, 21625470)] 2021-10-25 09:34:40.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9167438, 9191614), (9176380, 9177121), (9176380, 9177124), (9177630, 9191614), (9191813, 9233987), (9234657, 9235101), (9235263, 9238957), (9239762, 9239821), (9241269, 9241375), (9241549, 9241605), (9242929, 9242992), (9243178, 9243234), (9243545, 9243647), (9243545, 9243611), (9243900, 9245385), (9243900, 9244262), (9244586, 9245385), (9245712, 9245776)] 2021-10-25 09:34:40.866 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9241605, 9243178, 'FBtr0304974_exon_8') contains intron (9242929, 9242992) 2021-10-25 09:34:40.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10117868, 10118031), (10117899, 10118031), (10118542, 10119478), (10119727, 10119791), (10119990, 10120050), (10120358, 10120411)] 2021-10-25 09:34:40.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304974_exon_8'] 2021-10-25 09:34:40.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029821: ['FBtr0070824', 'FBtr0333800'] 2021-10-25 09:34:40.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003731: ['FBtr0071653', 'FBtr0071654'] 2021-10-25 09:34:40.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037108: ['FBtr0078422', 'FBtr0333392'] 2021-10-25 09:34:40.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5906011, 5906077), (5906363, 5906431), (5906668, 5906722), (5907209, 5907264), (5907335, 5907392), (5907518, 5907588)] 2021-10-25 09:34:40.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033490: ['FBtr0290287'] 2021-10-25 09:34:40.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033490 has a single transcript. 2021-10-25 09:34:40.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262476: ['FBtr0304865', 'FBtr0304867'] 2021-10-25 09:34:40.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033491: ['FBtr0088332'] 2021-10-25 09:34:40.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033491 has a single transcript. 2021-10-25 09:34:40.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033494: ['FBtr0301443', 'FBtr0301444', 'FBtr0310093', 'FBtr0310094', 'FBtr0310095', 'FBtr0310096', 'FBtr0310097', 'FBtr0299832', 'FBtr0299833'] 2021-10-25 09:34:40.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21523242, 21554829), (21547891, 21554829), (21555052, 21555188), (21556363, 21556430), (21556563, 21556633)] 2021-10-25 09:34:40.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.970 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21625963, 21626247), (21626378, 21626431), (21626624, 21626941), (21627400, 21627461), (21628135, 21628192)] 2021-10-25 09:34:40.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029822: ['FBtr0070825', 'FBtr0070826'] 2021-10-25 09:34:40.978 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8898850, 8915569), (8898850, 8915660), (8898948, 8915569), (8898948, 8915660), (8899734, 8915353), (8916053, 8922937), (8916053, 8925203), (8923456, 8925203), (8925529, 8925616), (8927003, 8927179), (8927486, 8927551), (8927707, 8928989), (8927707, 8928059), (8928743, 8928989), (8929663, 8929732), (8930396, 8931081), (8930396, 8930483), (8930550, 8932900), (8930550, 8931081), (8931147, 8932900), (8931316, 8932900), (8932323, 8932900)] 2021-10-25 09:34:40.980 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.981 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:40.984 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18514844, 18519140), (18519452, 18520427), (18520660, 18520717), (18521295, 18521646), (18521788, 18521855), (18522217, 18522280), (18522443, 18522516), (18522720, 18522972), (18522720, 18524232), (18523041, 18523193), (18523707, 18524232)] 2021-10-25 09:34:40.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:40.985 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5908761, 5908870), (5909537, 5909612), (5909849, 5909911), (5910061, 5912425), (5910061, 5910432)] 2021-10-25 09:34:41.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003733: ['FBtr0088938', 'FBtr0339117'] 2021-10-25 09:34:41.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037109: ['FBtr0078464', 'FBtr0302592', 'FBtr0333972'] 2021-10-25 09:34:41.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262477: ['FBtr0329937', 'FBtr0304869', 'FBtr0433516'] 2021-10-25 09:34:41.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7705357, 7705415), (7705589, 7705645), (7705783, 7705843), (7705966, 7706019), (7706114, 7706181), (7706680, 7706741), (7706913, 7706970), (7707306, 7707362), (7707306, 7707377), (7707668, 7707736), (7707905, 7707961), (7708044, 7708104), (7708342, 7708494), (7708725, 7708792)] 2021-10-25 09:34:41.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.086 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029823: ['FBtr0070827', 'FBtr0290235', 'FBtr0345317'] 2021-10-25 09:34:41.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041094: ['FBtr0076168', 'FBtr0339908'] 2021-10-25 09:34:41.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21629908, 21630932), (21629913, 21630932), (21632839, 21632915), (21634196, 21634261)] 2021-10-25 09:34:41.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9727013, 9727989), (9727617, 9727989), (9728091, 9728158), (9728235, 9728320), (9728365, 9728424), (9728602, 9728658), (9728836, 9728894)] 2021-10-25 09:34:41.110 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9727150, 9728091, 'FBtr0433516_exon_6') contains intron (9727617, 9727989) 2021-10-25 09:34:41.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433516_exon_6'] 2021-10-25 09:34:41.111 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11252960, 11253702)] 2021-10-25 09:34:41.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003741: ['FBtr0075364', 'FBtr0100244'] 2021-10-25 09:34:41.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5914403, 5914580), (5914780, 5916262), (5916479, 5916550)] 2021-10-25 09:34:41.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10146161, 10146228), (10146443, 10146707), (10146823, 10146890), (10146846, 10147058), (10146994, 10147058), (10147412, 10147484), (10147581, 10147645), (10147688, 10147919), (10148004, 10148081), (10148152, 10150855), (10148152, 10149347), (10148152, 10148632), (10148209, 10150855), (10149094, 10149347), (10149440, 10150855), (10151052, 10152903), (10151052, 10152377), (10152422, 10152903), (10153091, 10153306), (10153417, 10153475), (10153601, 10153807), (10153983, 10154041), (10154259, 10154448), (10154634, 10191977), (10154634, 10154721), (10154634, 10154730)] 2021-10-25 09:34:41.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16590294, 16590351), (16590755, 16591003), (16590930, 16591003)] 2021-10-25 09:34:41.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037110: ['FBtr0078423'] 2021-10-25 09:34:41.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037110 has a single transcript. 2021-10-25 09:34:41.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262478: ['FBtr0304816'] 2021-10-25 09:34:41.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262478 has a single transcript. 2021-10-25 09:34:41.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037114: ['FBtr0078463'] 2021-10-25 09:34:41.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037114 has a single transcript. 2021-10-25 09:34:41.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041096: ['FBtr0076053', 'FBtr0076054', 'FBtr0076055', 'FBtr0076056', 'FBtr0076057', 'FBtr0310009', 'FBtr0310010', 'FBtr0334109', 'FBtr0334110'] 2021-10-25 09:34:41.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262479: ['FBtr0304817'] 2021-10-25 09:34:41.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262479 has a single transcript. 2021-10-25 09:34:41.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037115: ['FBtr0078429'] 2021-10-25 09:34:41.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037115 has a single transcript. 2021-10-25 09:34:41.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037116: ['FBtr0078462'] 2021-10-25 09:34:41.229 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037116 has a single transcript. 2021-10-25 09:34:41.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262480: ['FBtr0304818', 'FBtr0344890'] 2021-10-25 09:34:41.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037117: ['FBtr0078430', 'FBtr0078431', 'FBtr0333967'] 2021-10-25 09:34:41.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029824: ['FBtr0070858', 'FBtr0343051'] 2021-10-25 09:34:41.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003742: ['FBtr0089621', 'FBtr0089619', 'FBtr0089617', 'FBtr0089616', 'FBtr0089615', 'FBtr0089618', 'FBtr0089620'] 2021-10-25 09:34:41.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18864094, 18864165), (18864094, 18864142), (18864288, 18864342), (18864424, 18864483)] 2021-10-25 09:34:41.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5917627, 5938568), (5938960, 5939038), (5939517, 5939624), (5940615, 5940971), (5941096, 5941164), (5941271, 5941325), (5941271, 5941348)] 2021-10-25 09:34:41.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.310 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21680152, 21680299), (21680223, 21680299), (21680232, 21680299), (21682433, 21682494), (21682623, 21682679)] 2021-10-25 09:34:41.311 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.311 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262481: ['FBtr0307055', 'FBtr0340446'] 2021-10-25 09:34:41.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029825: ['FBtr0070859', 'FBtr0343052'] 2021-10-25 09:34:41.377 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18865055, 18865139)] 2021-10-25 09:34:41.378 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037120: ['FBtr0078458', 'FBtr0078459', 'FBtr0113184', 'FBtr0332769'] 2021-10-25 09:34:41.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5942841, 5942902), (5943088, 5943154), (5943293, 5943376), (5943611, 5943672)] 2021-10-25 09:34:41.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085428: ['FBtr0112650', 'FBtr0344889', 'FBtr0345378', 'FBtr0345379'] 2021-10-25 09:34:41.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14602442, 14602503), (14602876, 14603160), (14602905, 14603160), (14603289, 14603347), (14603501, 14603733), (14603501, 14603983), (14603925, 14603983), (14604123, 14604196), (14604128, 14604196), (14604138, 14604196)] 2021-10-25 09:34:41.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14603347, 14603866, 'FBtr0089616_exon_1') contains intron (14603501, 14603733) 2021-10-25 09:34:41.413 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089616_exon_1'] 2021-10-25 09:34:41.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12008815, 12008878), (12012231, 12012427), (12012231, 12012930), (12012730, 12012930), (12013405, 12027021), (12013408, 12027021), (12027161, 12028695), (12028878, 12055193), (12028878, 12060980), (12055708, 12056188), (12055708, 12056229), (12055732, 12056229), (12061909, 12064561)] 2021-10-25 09:34:41.415 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12055193, 12056474, 'FBtr0076054_exon_1') contains intron (12055708, 12056188) 2021-10-25 09:34:41.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076054_exon_1'] 2021-10-25 09:34:41.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262482: ['FBtr0304821'] 2021-10-25 09:34:41.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262482 has a single transcript. 2021-10-25 09:34:41.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029826: ['FBtr0070861'] 2021-10-25 09:34:41.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029826 has a single transcript. 2021-10-25 09:34:41.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262483: ['FBtr0433493', 'FBtr0433494', 'FBtr0433495', 'FBtr0433496', 'FBtr0433497', 'FBtr0304826', 'FBtr0304827', 'FBtr0333832', 'FBtr0333833'] 2021-10-25 09:34:41.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029827: ['FBtr0070863'] 2021-10-25 09:34:41.477 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029827 has a single transcript. 2021-10-25 09:34:41.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21725495, 21725554), (21725950, 21726162), (21726727, 21728286), (21726937, 21728450), (21726937, 21728286), (21728392, 21728450)] 2021-10-25 09:34:41.479 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21728286, 21728673, 'FBtr0078458_exon_1') contains intron (21728392, 21728450) 2021-10-25 09:34:41.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029828: ['FBtr0070864'] 2021-10-25 09:34:41.507 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21728286, 21728673, 'FBtr0332769_exon_1') contains intron (21728392, 21728450) 2021-10-25 09:34:41.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029828 has a single transcript. 2021-10-25 09:34:41.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078458_exon_1', 'FBtr0332769_exon_1'] 2021-10-25 09:34:41.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029830: ['FBtr0070865', 'FBtr0343413', 'FBtr0343414'] 2021-10-25 09:34:41.533 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16310217, 16311060), (16311155, 16312229), (16312344, 16312409), (16312628, 16312714), (16312865, 16312924), (16313135, 16313191), (16313421, 16313484), (16314712, 16314767), (16315104, 16315432), (16315104, 16315168), (16315342, 16315432), (16315543, 16315598), (16315804, 16315860), (16315957, 16316022)] 2021-10-25 09:34:41.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5966327, 5966462), (5966737, 5978841), (5978961, 5982098), (5982311, 5982399), (5982311, 5982402), (5982593, 5982748), (5983059, 5983132), (5983296, 5984203), (5985422, 5985483), (5985686, 5985751), (5986230, 5986297)] 2021-10-25 09:34:41.591 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5966278, 5966737, 'FBtr0070865_exon_1') contains intron (5966327, 5966462) 2021-10-25 09:34:41.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070865_exon_1'] 2021-10-25 09:34:41.592 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033497: ['FBtr0088365', 'FBtr0339429'] 2021-10-25 09:34:41.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10208128, 10208190), (10208341, 10208400), (10208644, 10208705), (10208852, 10208920), (10209024, 10209100), (10209264, 10209439), (10209608, 10209879), (10210107, 10232023)] 2021-10-25 09:34:41.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037121: ['FBtr0078432'] 2021-10-25 09:34:41.654 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037121 has a single transcript. 2021-10-25 09:34:41.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037122: ['FBtr0078457'] 2021-10-25 09:34:41.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037122 has a single transcript. 2021-10-25 09:34:41.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037123: ['FBtr0078456'] 2021-10-25 09:34:41.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037123 has a single transcript. 2021-10-25 09:34:41.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037124: ['FBtr0078455'] 2021-10-25 09:34:41.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037124 has a single transcript. 2021-10-25 09:34:41.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029831: ['FBtr0070866', 'FBtr0343294'] 2021-10-25 09:34:41.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085430: ['FBtr0112653', 'FBtr0333160'] 2021-10-25 09:34:41.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037125: ['FBtr0078433'] 2021-10-25 09:34:41.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037125 has a single transcript. 2021-10-25 09:34:41.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033498: ['FBtr0088364'] 2021-10-25 09:34:41.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033498 has a single transcript. 2021-10-25 09:34:41.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037126: ['FBtr0078454'] 2021-10-25 09:34:41.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037126 has a single transcript. 2021-10-25 09:34:41.712 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15374968, 15381162), (15375322, 15381162), (15375677, 15381162), (15381328, 15381495), (15381594, 15381653), (15381881, 15383066), (15383190, 15383256), (15383690, 15385075), (15383690, 15385105), (15383735, 15385075), (15383735, 15385105), (15385619, 15385679), (15385791, 15386442), (15385791, 15386475), (15386621, 15386716), (15386917, 15387179), (15386917, 15387185), (15387370, 15387917), (15388605, 15388674), (15388910, 15390021), (15388910, 15391125), (15390102, 15391125), (15391743, 15392293), (15392635, 15393209), (15393498, 15396309), (15393498, 15399112), (15396377, 15399112)] 2021-10-25 09:34:41.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033499: ['FBtr0088334', 'FBtr0339448', 'FBtr0339449'] 2021-10-25 09:34:41.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003744: ['FBtr0074922', 'FBtr0332154'] 2021-10-25 09:34:41.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037127: ['FBtr0078453', 'FBtr0332768'] 2021-10-25 09:34:41.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5989357, 5990489), (5991385, 5991484)] 2021-10-25 09:34:41.735 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5988790, 5991385, 'FBtr0343294_exon_1') contains intron (5989357, 5990489) 2021-10-25 09:34:41.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343294_exon_1'] 2021-10-25 09:34:41.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18865719, 18871630), (18865719, 18871633), (18871873, 18871937), (18872101, 18872215), (18872526, 18872593), (18877351, 18877434), (18877773, 18877842), (18877992, 18878054)] 2021-10-25 09:34:41.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19832170, 19832227), (19832712, 19832769), (19832724, 19832769), (19832876, 19832933), (19833143, 19833609)] 2021-10-25 09:34:41.757 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21739630, 21739754), (21739633, 21739754)] 2021-10-25 09:34:41.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.765 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10247972, 10248049), (10247972, 10248074), (10248244, 10248311), (10248462, 10248524), (10248671, 10248720), (10248671, 10248735), (10248858, 10248918), (10248858, 10248941)] 2021-10-25 09:34:41.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029833: ['FBtr0070867', 'FBtr0305344'] 2021-10-25 09:34:41.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085431: ['FBtr0112654', 'FBtr0112656', 'FBtr0344385'] 2021-10-25 09:34:41.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003747: ['FBtr0070802'] 2021-10-25 09:34:41.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003747 has a single transcript. 2021-10-25 09:34:41.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041097: ['FBtr0077921', 'FBtr0335384'] 2021-10-25 09:34:41.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037128: ['FBtr0078434'] 2021-10-25 09:34:41.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037128 has a single transcript. 2021-10-25 09:34:41.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6037979, 6038040), (6038193, 6038262), (6038565, 6038875)] 2021-10-25 09:34:41.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037129: ['FBtr0078452'] 2021-10-25 09:34:41.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037129 has a single transcript. 2021-10-25 09:34:41.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003748: ['FBtr0071535', 'FBtr0071536', 'FBtr0071537', 'FBtr0071538', 'FBtr0071539', 'FBtr0071540', 'FBtr0332423'] 2021-10-25 09:34:41.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037130: ['FBtr0078450', 'FBtr0310451', 'FBtr0333892', 'FBtr0333893'] 2021-10-25 09:34:41.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1256945, 1273584), (1273778, 1280598), (1280701, 1284605), (1284890, 1285303), (1285444, 1285505), (1285637, 1285744), (1287049, 1287160), (1287259, 1287500), (1287741, 1288132), (1288293, 1289454), (1289728, 1292647)] 2021-10-25 09:34:41.864 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12386396, 12386504), (12386673, 12389016), (12389240, 12389486), (12390068, 12401790), (12402210, 12402279), (12402481, 12402537)] 2021-10-25 09:34:41.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029834: ['FBtr0305345', 'FBtr0305346'] 2021-10-25 09:34:41.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033500: ['FBtr0088335', 'FBtr0339450'] 2021-10-25 09:34:41.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041100: ['FBtr0078318', 'FBtr0078319'] 2021-10-25 09:34:41.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6040098, 6040524), (6040392, 6040524), (6040786, 6041585), (6041719, 6042253), (6042894, 6042951), (6043272, 6043335), (6044614, 6044684), (6045052, 6045115), (6045551, 6045618)] 2021-10-25 09:34:41.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21746616, 21746668), (21747037, 21747102), (21747297, 21747501), (21747297, 21747507), (21747800, 21747991), (21748201, 21760030), (21760512, 21760957), (21760515, 21760957), (21761265, 21770445), (21761265, 21769917)] 2021-10-25 09:34:41.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10249439, 10252957), (10254025, 10254139), (10254276, 10254336), (10254639, 10254700)] 2021-10-25 09:34:41.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21194956, 21195033), (21195130, 21195185), (21195630, 21195771), (21196117, 21196192), (21196385, 21196444), (21196712, 21196775)] 2021-10-25 09:34:41.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:41.970 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:41.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085432: ['FBtr0308615', 'FBtr0112657', 'FBtr0100245', 'FBtr0089162', 'FBtr0089159', 'FBtr0089161', 'FBtr0100246', 'FBtr0309803', 'FBtr0334301'] 2021-10-25 09:34:41.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029835: ['FBtr0305342', 'FBtr0305343', 'FBtr0336972'] 2021-10-25 09:34:42.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033501: ['FBtr0088336', 'FBtr0289962', 'FBtr0339451', 'FBtr0339452', 'FBtr0339453', 'FBtr0339454'] 2021-10-25 09:34:42.012 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21074112, 21076652), (21075710, 21076652), (21076499, 21076652), (21077139, 21085197), (21080811, 21085197), (21080871, 21084492), (21084698, 21085197), (21085387, 21085447), (21086725, 21086789), (21087412, 21087780), (21087853, 21088337), (21087858, 21087937)] 2021-10-25 09:34:42.014 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.014 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041102: ['FBtr0085599'] 2021-10-25 09:34:42.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041102 has a single transcript. 2021-10-25 09:34:42.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041103: ['FBtr0300021'] 2021-10-25 09:34:42.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041103 has a single transcript. 2021-10-25 09:34:42.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041105: ['FBtr0082177', 'FBtr0330083'] 2021-10-25 09:34:42.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6051319, 6059885), (6060257, 6060379), (6060513, 6060573), (6061555, 6061719), (6062064, 6063332), (6062064, 6063071), (6063242, 6063332), (6063527, 6063805)] 2021-10-25 09:34:42.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037131: ['FBtr0078435'] 2021-10-25 09:34:42.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037131 has a single transcript. 2021-10-25 09:34:42.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037133: ['FBtr0078436'] 2021-10-25 09:34:42.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037133 has a single transcript. 2021-10-25 09:34:42.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037134: ['FBtr0078440'] 2021-10-25 09:34:42.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037134 has a single transcript. 2021-10-25 09:34:42.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10072647, 10072707), (10072898, 10073029)] 2021-10-25 09:34:42.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037135: ['FBtr0078441', 'FBtr0303245', 'FBtr0303246', 'FBtr0303247'] 2021-10-25 09:34:42.093 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082177': ['FBtr0330083']} 2021-10-25 09:34:42.093 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330083']] 2021-10-25 09:34:42.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041111: ['FBtr0077634', 'FBtr0077632', 'FBtr0077633', 'FBtr0290038', 'FBtr0290039', 'FBtr0290040', 'FBtr0290041', 'FBtr0332458', 'FBtr0452101'] 2021-10-25 09:34:42.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262484: ['FBtr0304829'] 2021-10-25 09:34:42.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262484 has a single transcript. 2021-10-25 09:34:42.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262485: ['FBtr0304838'] 2021-10-25 09:34:42.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262485 has a single transcript. 2021-10-25 09:34:42.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10256874, 10258970), (10259451, 10259515), (10259585, 10260862), (10259585, 10260012), (10259627, 10260862), (10259627, 10260012), (10260429, 10260862), (10260429, 10260836)] 2021-10-25 09:34:42.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262486: ['FBtr0304837'] 2021-10-25 09:34:42.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262486 has a single transcript. 2021-10-25 09:34:42.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262487: ['FBtr0304841'] 2021-10-25 09:34:42.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262487 has a single transcript. 2021-10-25 09:34:42.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029836: ['FBtr0070871', 'FBtr0100295', 'FBtr0308190'] 2021-10-25 09:34:42.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262508: ['FBtr0340707', 'FBtr0304807', 'FBtr0304808', 'FBtr0304809', 'FBtr0304810', 'FBtr0304811', 'FBtr0304812', 'FBtr0304813', 'FBtr0304814', 'FBtr0304815', 'FBtr0333111', 'FBtr0333112', 'FBtr0333113'] 2021-10-25 09:34:42.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21825077, 21825249), (21826414, 21826474), (21826752, 21827093), (21827035, 21827093)] 2021-10-25 09:34:42.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(69849, 72320), (69981, 72320), (70567, 72320), (72335, 72403), (72594, 72816), (72862, 75067), (75165, 82637), (82746, 85711), (85799, 85852), (85933, 87016), (87166, 94422), (93273, 94422), (94615, 97821), (94615, 94836), (95002, 99405), (97975, 99405), (99475, 107402), (99475, 104082), (104528, 107402), (108372, 108426)] 2021-10-25 09:34:42.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 110059, 'FBtr0308615_exon_14') contains intron (108372, 108426) 2021-10-25 09:34:42.198 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 110059, 'FBtr0112657_exon_5') contains intron (108372, 108426) 2021-10-25 09:34:42.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 109770, 'FBtr0100245_exon_13') contains intron (108372, 108426) 2021-10-25 09:34:42.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (72320, 72594, 'FBtr0089162_exon_2') contains intron (72335, 72403) 2021-10-25 09:34:42.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 110059, 'FBtr0089162_exon_12') contains intron (108372, 108426) 2021-10-25 09:34:42.200 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 108694, 'FBtr0089159_exon_13') contains intron (108372, 108426) 2021-10-25 09:34:42.200 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (72320, 72594, 'FBtr0089161_exon_2') contains intron (72335, 72403) 2021-10-25 09:34:42.200 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 110059, 'FBtr0089161_exon_12') contains intron (108372, 108426) 2021-10-25 09:34:42.201 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (72320, 72594, 'FBtr0309803_exon_2') contains intron (72335, 72403) 2021-10-25 09:34:42.201 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (107402, 114270, 'FBtr0309803_exon_12') contains intron (108372, 108426) 2021-10-25 09:34:42.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308615_exon_14', 'FBtr0112657_exon_5', 'FBtr0100245_exon_13', 'FBtr0089162_exon_2', 'FBtr0089162_exon_12', 'FBtr0089159_exon_13', 'FBtr0089161_exon_2', 'FBtr0089161_exon_12', 'FBtr0309803_exon_2', 'FBtr0309803_exon_12'] 2021-10-25 09:34:42.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6068303, 6068360), (6068483, 6068551), (6068683, 6069056)] 2021-10-25 09:34:42.231 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6067957, 6068483, 'FBtr0100295_exon_1') contains intron (6068303, 6068360) 2021-10-25 09:34:42.231 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6068551, 6069264, 'FBtr0308190_exon_3') contains intron (6068683, 6069056) 2021-10-25 09:34:42.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100295_exon_1', 'FBtr0308190_exon_3'] 2021-10-25 09:34:42.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2886133, 2946708), (2886578, 2889673), (2888598, 2912767), (2888598, 2890449), (2890916, 2924913), (2890916, 2946708), (2890916, 2929983), (2890916, 2945029), (2912888, 2946708), (2925144, 2945029), (2930151, 2945029), (2945792, 2946708), (2946658, 2946708), (2947435, 2947608), (2948030, 2948088), (2948145, 2948204), (2951111, 2951190), (2951382, 2951469), (2951556, 2951639), (2951805, 2951876), (2952027, 2952088)] 2021-10-25 09:34:42.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037137: ['FBtr0089580', 'FBtr0089579', 'FBtr0332811', 'FBtr0332812'] 2021-10-25 09:34:42.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029837: ['FBtr0070888', 'FBtr0114466', 'FBtr0331169'] 2021-10-25 09:34:42.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033502: ['FBtr0088337', 'FBtr0310141', 'FBtr0310142'] 2021-10-25 09:34:42.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6070202, 6070292), (6070453, 6070520), (6070715, 6070856), (6071048, 6071804), (6071875, 6072861), (6071875, 6074576)] 2021-10-25 09:34:42.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21832977, 21833179), (21834829, 21835070), (21834829, 21835466), (21834829, 21835073), (21835229, 21835982), (21835229, 21835466)] 2021-10-25 09:34:42.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.404 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0114466': ['FBtr0331169']} 2021-10-25 09:34:42.404 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331169']] 2021-10-25 09:34:42.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003751: ['FBtr0080078'] 2021-10-25 09:34:42.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003751 has a single transcript. 2021-10-25 09:34:42.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003861: ['FBtr0085513', 'FBtr0331356'] 2021-10-25 09:34:42.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029838: ['FBtr0070887', 'FBtr0345900'] 2021-10-25 09:34:42.456 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10265231, 10267099), (10267027, 10267099), (10267262, 10267735), (10268042, 10268145)] 2021-10-25 09:34:42.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.465 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29915552, 29915612), (29915767, 29915826), (29915987, 29916042), (29916208, 29916419), (29916639, 29916954), (29917312, 29917373), (29917741, 29917798), (29918097, 29918152), (29918387, 29918554), (29918731, 29918805), (29918731, 29918825), (29919027, 29919414), (29919557, 29919618), (29919856, 29919914)] 2021-10-25 09:34:42.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.477 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8578961, 8579473), (8579034, 8579473), (8579136, 8579473), (8579624, 8581762), (8579624, 8585970), (8579639, 8581762), (8579639, 8585970), (8581855, 8585970), (8583766, 8585970), (8585689, 8585970), (8586956, 8587343), (8588818, 8593466), (8588818, 8588929), (8589260, 8593466), (8593021, 8593466), (8595441, 8595552), (8595794, 8595860), (8595794, 8596411), (8596103, 8596411)] 2021-10-25 09:34:42.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.480 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6076984, 6077336)] 2021-10-25 09:34:42.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003862: ['FBtr0082950', 'FBtr0082949', 'FBtr0082947', 'FBtr0082948', 'FBtr0100277'] 2021-10-25 09:34:42.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037138: ['FBtr0078445', 'FBtr0078446', 'FBtr0078447', 'FBtr0332813', 'FBtr0303031'] 2021-10-25 09:34:42.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029839: ['FBtr0070886'] 2021-10-25 09:34:42.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029839 has a single transcript. 2021-10-25 09:34:42.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029840: ['FBtr0332964', 'FBtr0345895'] 2021-10-25 09:34:42.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085433: ['FBtr0112667', 'FBtr0112668', 'FBtr0112669'] 2021-10-25 09:34:42.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033504: ['FBtr0088341', 'FBtr0088342', 'FBtr0088343', 'FBtr0088344', 'FBtr0088345', 'FBtr0088346', 'FBtr0088347', 'FBtr0088338', 'FBtr0088339', 'FBtr0088340', 'FBtr0301965', 'FBtr0301131', 'FBtr0299825', 'FBtr0299826', 'FBtr0299828', 'FBtr0299829', 'FBtr0299830', 'FBtr0306688', 'FBtr0306690', 'FBtr0306691', 'FBtr0336694', 'FBtr0336695', 'FBtr0336696'] 2021-10-25 09:34:42.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6083790, 6083853), (6084054, 6084222), (6084608, 6084790), (6088213, 6088271)] 2021-10-25 09:34:42.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15364576, 15364634), (15365345, 15365406), (15365708, 15365770), (15365904, 15365959), (15366289, 15366346), (15366596, 15366663), (15366596, 15367146)] 2021-10-25 09:34:42.633 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15366346, 15366780, 'FBtr0112669_exon_1') contains intron (15366596, 15366663) 2021-10-25 09:34:42.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112669_exon_1'] 2021-10-25 09:34:42.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14265107, 14265167), (14265343, 14265420), (14265554, 14265623), (14273850, 14273914), (14274121, 14274191), (14275368, 14276305), (14275368, 14286208), (14275368, 14279092), (14277542, 14279092), (14277542, 14286208), (14279541, 14286208)] 2021-10-25 09:34:42.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041147: ['FBtr0073160'] 2021-10-25 09:34:42.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041147 has a single transcript. 2021-10-25 09:34:42.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21837723, 21837776), (21838144, 21838211), (21838434, 21838491), (21838679, 21838740), (21838912, 21839060), (21839534, 21839665), (21839827, 21841230), (21839831, 21841025), (21839831, 21841230), (21839831, 21840098), (21839831, 21840050)] 2021-10-25 09:34:42.659 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.659 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029843: ['FBtr0070872', 'FBtr0070873', 'FBtr0340032', 'FBtr0343930'] 2021-10-25 09:34:42.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041150: ['FBtr0077395', 'FBtr0077400', 'FBtr0077398', 'FBtr0077399', 'FBtr0077397', 'FBtr0077396', 'FBtr0336833', 'FBtr0336834', 'FBtr0345631'] 2021-10-25 09:34:42.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6091568, 6091632), (6092079, 6096051), (6092215, 6096051), (6094157, 6096051), (6095063, 6096051), (6096653, 6099580), (6099679, 6101238), (6101366, 6101438), (6101556, 6101652), (6102659, 6102724), (6102887, 6102955), (6103272, 6103326)] 2021-10-25 09:34:42.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085434: ['FBtr0330240', 'FBtr0308342', 'FBtr0308343', 'FBtr0308344', 'FBtr0308345', 'FBtr0308346', 'FBtr0308347', 'FBtr0333815', 'FBtr0333816', 'FBtr0333817'] 2021-10-25 09:34:42.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003863: ['FBtr0088161'] 2021-10-25 09:34:42.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003863 has a single transcript. 2021-10-25 09:34:42.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037139: ['FBtr0078444'] 2021-10-25 09:34:42.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037139 has a single transcript. 2021-10-25 09:34:42.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003865: ['FBtr0073582'] 2021-10-25 09:34:42.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003865 has a single transcript. 2021-10-25 09:34:42.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037140: ['FBtr0078471'] 2021-10-25 09:34:42.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037140 has a single transcript. 2021-10-25 09:34:42.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003866: ['FBtr0085906'] 2021-10-25 09:34:42.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003866 has a single transcript. 2021-10-25 09:34:42.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037141: ['FBtr0078489'] 2021-10-25 09:34:42.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037141 has a single transcript. 2021-10-25 09:34:42.856 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4909254, 4909314), (4909408, 4909475), (4909623, 4909677), (4910025, 4910082), (4910412, 4910468), (4911512, 4911580), (4911641, 4911722), (4911671, 4911722), (4911867, 4912671), (4912778, 4931913), (4912778, 4925828), (4912778, 4915046), (4926278, 4928243), (4926346, 4928243), (4926346, 4928227), (4926346, 4928197), (4926350, 4928243), (4926350, 4928193)] 2021-10-25 09:34:42.858 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.858 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037142: ['FBtr0078472', 'FBtr0334088'] 2021-10-25 09:34:42.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003867: ['FBtr0084165', 'FBtr0084164', 'FBtr0334312'] 2021-10-25 09:34:42.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029848: ['FBtr0070878'] 2021-10-25 09:34:42.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029848 has a single transcript. 2021-10-25 09:34:42.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029849: ['FBtr0070874', 'FBtr0070875'] 2021-10-25 09:34:42.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21942454, 21943736), (21944058, 21944116), (21946118, 21946792), (21947197, 21947247), (21948703, 21948848), (21948942, 21949001)] 2021-10-25 09:34:42.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.935 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21779203, 21779551), (21779783, 21781987), (21779783, 21781717), (21779783, 21782483), (21781905, 21781987)] 2021-10-25 09:34:42.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6220417, 6220477), (6220417, 6221379), (6220572, 6221379)] 2021-10-25 09:34:42.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:42.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037143: ['FBtr0347604'] 2021-10-25 09:34:42.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037143 has a single transcript. 2021-10-25 09:34:42.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037144: ['FBtr0078475'] 2021-10-25 09:34:42.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037144 has a single transcript. 2021-10-25 09:34:42.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24891692, 24892401), (24891837, 24892283), (24892548, 24894083), (24894606, 24900843), (24901055, 24904280), (24904178, 24904280), (24904900, 24904969), (24905189, 24905246), (24905381, 24905436), (24906172, 24906227), (24906442, 24906498), (24906669, 24906724), (24906918, 24906979), (24907082, 24907144), (24907273, 24908134), (24907273, 24908478), (24908149, 24908478), (24908721, 24908775), (24910910, 24910963), (24911291, 24911352), (24911453, 24911998), (24912173, 24912252), (24912549, 24912826), (24912981, 24913675), (24913809, 24913872), (24914542, 24914649), (24915009, 24915113), (24915222, 24915280), (24915462, 24916771), (24915462, 24915730), (24915462, 24917319), (24915831, 24917319), (24916890, 24917319), (24917481, 24917647), (24917529, 24917647), (24917577, 24917647)] 2021-10-25 09:34:42.990 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24907144, 24908721, 'FBtr0333815_exon_13') contains intron (24907273, 24908134) 2021-10-25 09:34:42.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24904969, 24905381, 'FBtr0333816_exon_6') contains intron (24905189, 24905246) 2021-10-25 09:34:42.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24911998, 24913809, 'FBtr0333816_exon_17') contains intron (24912173, 24912252) 2021-10-25 09:34:42.992 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24913872, 24915009, 'FBtr0333817_exon_22') contains intron (24914542, 24914649) 2021-10-25 09:34:42.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333815_exon_13', 'FBtr0333816_exon_6', 'FBtr0333816_exon_17', 'FBtr0333817_exon_22'] 2021-10-25 09:34:42.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:42.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037146: ['FBtr0078477', 'FBtr0309869'] 2021-10-25 09:34:43.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029851: ['FBtr0070893', 'FBtr0112954', 'FBtr0339495', 'FBtr0339496'] 2021-10-25 09:34:43.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21972242, 21976294), (21976459, 21976583), (21976724, 21976785), (21976893, 21976967), (21977135, 21977192), (21977381, 21977434), (21977630, 21978132), (21978374, 21980303), (21980561, 21980631), (21980857, 21980916), (21981195, 21982133)] 2021-10-25 09:34:43.036 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.037 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003870: ['FBtr0085825', 'FBtr0085826', 'FBtr0085827', 'FBtr0085828', 'FBtr0085829', 'FBtr0085830', 'FBtr0303227', 'FBtr0303228'] 2021-10-25 09:34:43.051 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330240': ['FBtr0308343']} 2021-10-25 09:34:43.051 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0308343']] 2021-10-25 09:34:43.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262509: ['FBtr0304830', 'FBtr0304831', 'FBtr0304833', 'FBtr0304834', 'FBtr0304836', 'FBtr0333221'] 2021-10-25 09:34:43.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037147: ['FBtr0114546'] 2021-10-25 09:34:43.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037147 has a single transcript. 2021-10-25 09:34:43.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6237663, 6238000), (6238200, 6238945), (6238260, 6238720), (6238260, 6238945), (6238738, 6238945), (6239174, 6239387), (6239234, 6239387), (6239607, 6240008)] 2021-10-25 09:34:43.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037149: ['FBtr0078480', 'FBtr0334111'] 2021-10-25 09:34:43.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10269116, 10269261), (10269362, 10269421), (10269501, 10294611), (10272080, 10294393), (10272080, 10293621), (10272080, 10292494), (10272080, 10294611), (10276804, 10294611), (10284801, 10285409), (10284801, 10293621), (10284801, 10293340), (10284801, 10287073), (10284801, 10294611), (10287280, 10293621), (10287280, 10294611), (10288011, 10293340), (10288011, 10288199), (10288271, 10292494), (10291137, 10294611), (10292872, 10293340), (10293439, 10294611), (10293439, 10293621), (10293761, 10293860), (10293933, 10294149), (10293933, 10294611), (10294182, 10294611), (10294517, 10294611), (10294765, 10294845), (10294966, 10295290), (10294966, 10295741), (10295323, 10295741), (10295794, 10295868), (10296047, 10300489), (10296047, 10304623), (10296047, 10296434), (10300268, 10304596), (10300268, 10304623), (10300588, 10304623), (10302020, 10304623), (10303046, 10304623), (10304930, 10304987), (10305102, 10305471), (10305678, 10305737), (10305970, 10306144)] 2021-10-25 09:34:43.109 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10287865, 10288271, 'FBtr0088342_exon_1') contains intron (10288011, 10288199) 2021-10-25 09:34:43.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088342_exon_1'] 2021-10-25 09:34:43.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:43.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22998766, 23002052), (23002443, 23007327), (23007499, 23007558), (23007707, 23010849), (23011020, 23011437), (23011596, 23011740), (23011817, 23012722), (23012821, 23012879), (23013039, 23013193), (23013305, 23013768), (23013950, 23014018), (23014194, 23014430), (23014562, 23014632), (23014748, 23015177), (23015562, 23018967), (23019097, 23019154), (23019250, 23019308), (23019467, 23019529), (23019612, 23020655), (23020842, 23024028), (23020842, 23021678), (23021708, 23024028), (23024169, 23029836), (23024169, 23025085), (23025119, 23029836), (23025119, 23025543), (23026187, 23026307), (23026667, 23029836), (23029931, 23037637), (23029931, 23030818), (23029931, 23038011), (23032201, 23033493), (23034387, 23038011), (23037753, 23038011)] 2021-10-25 09:34:43.185 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23014632, 23015562, 'FBtr0304836_exon_14') contains intron (23014748, 23015177) 2021-10-25 09:34:43.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304836_exon_14'] 2021-10-25 09:34:43.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037150: ['FBtr0078485'] 2021-10-25 09:34:43.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037150 has a single transcript. 2021-10-25 09:34:43.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31714269, 31727131), (31725331, 31727131), (31725872, 31727131), (31726492, 31727131), (31727434, 31727621), (31728254, 31728391), (31728479, 31732919), (31728479, 31729631)] 2021-10-25 09:34:43.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037151: ['FBtr0078484'] 2021-10-25 09:34:43.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041156: ['FBtr0076751'] 2021-10-25 09:34:43.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037151 has a single transcript. 2021-10-25 09:34:43.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041156 has a single transcript. 2021-10-25 09:34:43.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041160: ['FBtr0075580'] 2021-10-25 09:34:43.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041160 has a single transcript. 2021-10-25 09:34:43.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037153: ['FBtr0301492', 'FBtr0333219'] 2021-10-25 09:34:43.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029853: ['FBtr0070895'] 2021-10-25 09:34:43.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029853 has a single transcript. 2021-10-25 09:34:43.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041164: ['FBtr0100641', 'FBtr0309840', 'FBtr0309841'] 2021-10-25 09:34:43.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029854: ['FBtr0089869', 'FBtr0089870', 'FBtr0305177'] 2021-10-25 09:34:43.274 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22136809, 22183785), (22184602, 22206829), (22206985, 22221699), (22221984, 22222487), (22222673, 22223651), (22223847, 22228996), (22229166, 22229259), (22229422, 22231223), (22231359, 22239166), (22239335, 22242347)] 2021-10-25 09:34:43.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3461462, 3461540), (3461670, 3462120), (3461670, 3462103), (3462784, 3462861), (3463290, 3463356), (3463959, 3464016), (3464979, 3465048), (3465852, 3465908)] 2021-10-25 09:34:43.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.309 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6275170, 6276227), (6275390, 6276227), (6276296, 6276369), (6276458, 6276531)] 2021-10-25 09:34:43.310 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6274971, 6276296, 'FBtr0089869_exon_3') contains intron (6275170, 6276227) 2021-10-25 09:34:43.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089869_exon_3'] 2021-10-25 09:34:43.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037156: ['FBtr0078511'] 2021-10-25 09:34:43.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037156 has a single transcript. 2021-10-25 09:34:43.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037162: ['FBtr0078503'] 2021-10-25 09:34:43.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037162 has a single transcript. 2021-10-25 09:34:43.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037163: ['FBtr0078508'] 2021-10-25 09:34:43.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037163 has a single transcript. 2021-10-25 09:34:43.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037164: ['FBtr0078504', 'FBtr0345586'] 2021-10-25 09:34:43.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041171: ['FBtr0073245', 'FBtr0073246', 'FBtr0073247'] 2021-10-25 09:34:43.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085436: ['FBtr0112672', 'FBtr0112673', 'FBtr0112674', 'FBtr0339394', 'FBtr0304957', 'FBtr0302122'] 2021-10-25 09:34:43.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:43.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029856: ['FBtr0333520'] 2021-10-25 09:34:43.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029856 has a single transcript. 2021-10-25 09:34:43.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029857: ['FBtr0070897'] 2021-10-25 09:34:43.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029857 has a single transcript. 2021-10-25 09:34:43.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029858: ['FBtr0070898', 'FBtr0305494'] 2021-10-25 09:34:43.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262510: ['FBtr0305350'] 2021-10-25 09:34:43.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262510 has a single transcript. 2021-10-25 09:34:43.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4247587, 4247653), (4247825, 4247911), (4248122, 4248182), (4248408, 4248472), (4248654, 4248723), (4251840, 4253026), (4251840, 4251981), (4251840, 4254127), (4253077, 4253988)] 2021-10-25 09:34:43.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037165: ['FBtr0078505'] 2021-10-25 09:34:43.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037165 has a single transcript. 2021-10-25 09:34:43.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6292668, 6292734)] 2021-10-25 09:34:43.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037166: ['FBtr0078506'] 2021-10-25 09:34:43.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037166 has a single transcript. 2021-10-25 09:34:43.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037167: ['FBtr0078507'] 2021-10-25 09:34:43.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262511: ['FBtr0290031', 'FBtr0290032', 'FBtr0087173', 'FBtr0087176', 'FBtr0087175'] 2021-10-25 09:34:43.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037167 has a single transcript. 2021-10-25 09:34:43.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037169: ['FBtr0078513', 'FBtr0331778'] 2021-10-25 09:34:43.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029859: ['FBtr0070926'] 2021-10-25 09:34:43.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029859 has a single transcript. 2021-10-25 09:34:43.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003882: ['FBtr0302338'] 2021-10-25 09:34:43.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003882 has a single transcript. 2021-10-25 09:34:43.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22548544, 22548591), (22548544, 22548600), (22548752, 22548805)] 2021-10-25 09:34:43.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029860: ['FBtr0100319', 'FBtr0346642'] 2021-10-25 09:34:43.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003884: ['FBtr0081639'] 2021-10-25 09:34:43.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003884 has a single transcript. 2021-10-25 09:34:43.533 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9568086, 9568562), (9568375, 9568562), (9568922, 9568984), (9570156, 9570213), (9570156, 9570219), (9572783, 9572917), (9573700, 9573786), (9575007, 9575069), (9575532, 9575587), (9576115, 9576177), (9576118, 9576177), (9576384, 9577689), (9576384, 9578184)] 2021-10-25 09:34:43.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003885: ['FBtr0081538'] 2021-10-25 09:34:43.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003885 has a single transcript. 2021-10-25 09:34:43.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003886: ['FBtr0082087'] 2021-10-25 09:34:43.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003886 has a single transcript. 2021-10-25 09:34:43.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041174: ['FBtr0088115', 'FBtr0332420'] 2021-10-25 09:34:43.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003888: ['FBtr0072270', 'FBtr0343443'] 2021-10-25 09:34:43.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:43.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037170: ['FBtr0078514'] 2021-10-25 09:34:43.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037170 has a single transcript. 2021-10-25 09:34:43.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037171: ['FBtr0331779', 'FBtr0347082', 'FBtr0347081'] 2021-10-25 09:34:43.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:43.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24306138, 24310721), (24310830, 24310895), (24310830, 24310892), (24311137, 24311193)] 2021-10-25 09:34:43.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16326064, 16326134), (16326273, 16326332), (16326430, 16326492), (16326748, 16326810), (16326909, 16326973), (16327160, 16333033), (16327160, 16328552), (16327160, 16330236), (16328914, 16329416), (16330398, 16333033), (16333187, 16333277), (16333420, 16336489), (16333420, 16333779)] 2021-10-25 09:34:43.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029861: ['FBtr0070899'] 2021-10-25 09:34:43.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029861 has a single transcript. 2021-10-25 09:34:43.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029863: ['FBtr0070900'] 2021-10-25 09:34:43.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029863 has a single transcript. 2021-10-25 09:34:43.645 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22577676, 22582401), (22582658, 22583002), (22583362, 22595871), (22595910, 22615707), (22615794, 22637194)] 2021-10-25 09:34:43.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.646 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029864: ['FBtr0070901', 'FBtr0112955', 'FBtr0339770', 'FBtr0339771'] 2021-10-25 09:34:43.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003889: ['FBtr0082046'] 2021-10-25 09:34:43.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003889 has a single transcript. 2021-10-25 09:34:43.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041180: ['FBtr0081254', 'FBtr0331328', 'FBtr0331329', 'FBtr0331330'] 2021-10-25 09:34:43.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003890: ['FBtr0300611', 'FBtr0334906'] 2021-10-25 09:34:43.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27967201, 27967268), (27967591, 27968926), (27969191, 27969659), (27969191, 27969382), (27969550, 27972920), (27969827, 27972920), (27973150, 27974107), (27974342, 27988098)] 2021-10-25 09:34:43.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037172: ['FBtr0078515'] 2021-10-25 09:34:43.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037172 has a single transcript. 2021-10-25 09:34:43.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6309454, 6315998), (6316262, 6320488), (6317555, 6320488), (6317741, 6320488), (6320998, 6323688), (6320998, 6321840), (6320998, 6321819), (6321969, 6323688), (6325990, 6326052), (6327598, 6327663), (6327730, 6327796)] 2021-10-25 09:34:43.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19548695, 19549858), (19549928, 19551681), (19552413, 19552472), (19552899, 19552955), (19553293, 19553361), (19553915, 19553969), (19553915, 19553975), (19556092, 19556161)] 2021-10-25 09:34:43.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037174: ['FBtr0078517', 'FBtr0100669', 'FBtr0331774'] 2021-10-25 09:34:43.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085437: ['FBtr0114584', 'FBtr0114585', 'FBtr0071439', 'FBtr0112675', 'FBtr0343023', 'FBtr0343022', 'FBtr0343024', 'FBtr0343025', 'FBtr0343026', 'FBtr0343027'] 2021-10-25 09:34:43.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003891: ['FBtr0071582', 'FBtr0342870'] 2021-10-25 09:34:43.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262512: ['FBtr0087341'] 2021-10-25 09:34:43.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262512 has a single transcript. 2021-10-25 09:34:43.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262513: ['FBtr0087070'] 2021-10-25 09:34:43.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262513 has a single transcript. 2021-10-25 09:34:43.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21183797, 21184066), (21184454, 21184517), (21185021, 21185074), (21185908, 21185968), (21187047, 21187102), (21187047, 21187111), (21187932, 21188024), (21188256, 21188373), (21188573, 21188626)] 2021-10-25 09:34:43.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22670029, 22678295), (22678717, 22679054), (22678717, 22679051), (22678717, 22678792), (22679144, 22679202), (22679356, 22679417), (22679701, 22679763)] 2021-10-25 09:34:43.811 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.811 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262514: ['FBtr0290022'] 2021-10-25 09:34:43.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262514 has a single transcript. 2021-10-25 09:34:43.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262515: ['FBtr0088587', 'FBtr0088588'] 2021-10-25 09:34:43.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003892: ['FBtr0089427'] 2021-10-25 09:34:43.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003892 has a single transcript. 2021-10-25 09:34:43.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9207659, 9207747), (9207850, 9207913), (9208016, 9208082), (9208344, 9208416)] 2021-10-25 09:34:43.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041181: ['FBtr0079477'] 2021-10-25 09:34:43.876 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9207560, 9207850, 'FBtr0088588_exon_1') contains intron (9207659, 9207747) 2021-10-25 09:34:43.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041181 has a single transcript. 2021-10-25 09:34:43.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088588_exon_1'] 2021-10-25 09:34:43.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003896: ['FBtr0081111', 'FBtr0081112', 'FBtr0342921'] 2021-10-25 09:34:43.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041182: ['FBtr0079510', 'FBtr0079511', 'FBtr0079513', 'FBtr0335487', 'FBtr0335488'] 2021-10-25 09:34:43.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029866: ['FBtr0070903', 'FBtr0070904', 'FBtr0331394', 'FBtr0331395'] 2021-10-25 09:34:43.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037175: ['FBtr0331777'] 2021-10-25 09:34:43.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037175 has a single transcript. 2021-10-25 09:34:43.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037176: ['FBtr0078518', 'FBtr0289975'] 2021-10-25 09:34:43.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262516: ['FBtr0074952'] 2021-10-25 09:34:43.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262516 has a single transcript. 2021-10-25 09:34:43.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262517: ['FBtr0074974'] 2021-10-25 09:34:43.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262517 has a single transcript. 2021-10-25 09:34:43.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18860913, 18860976), (18861205, 18861681), (18861897, 18861955), (18862118, 18862179), (18862300, 18864094), (18864283, 18864392), (18864523, 18865469), (18865659, 18880656)] 2021-10-25 09:34:43.952 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18859506, 18861205, 'FBtr0081112_exon_8') contains intron (18860913, 18860976) 2021-10-25 09:34:43.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081112_exon_8'] 2021-10-25 09:34:43.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262518: ['FBtr0074921', 'FBtr0308832', 'FBtr0308833'] 2021-10-25 09:34:43.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22687450, 22687512), (22687827, 22687889), (22687827, 22687934)] 2021-10-25 09:34:43.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10220740, 10221362), (10221582, 10221658), (10221582, 10221865), (10221688, 10221865), (10222264, 10222325), (10222586, 10224918), (10222586, 10224313), (10222586, 10222897), (10223455, 10224918), (10223455, 10224313), (10224505, 10224918), (10225059, 10225190), (10225734, 10225797), (10226021, 10226179), (10226021, 10226514), (10226371, 10226514), (10226655, 10227348), (10226655, 10227402), (10226655, 10227411), (10226655, 10226971), (10226989, 10227402), (10227957, 10228022), (10228609, 10228671), (10229507, 10229582)] 2021-10-25 09:34:43.983 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10226714, 10227957, 'FBtr0343027_exon_1') contains intron (10226989, 10227402) 2021-10-25 09:34:43.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343027_exon_1'] 2021-10-25 09:34:43.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6338463, 6341059), (6339591, 6341059), (6339591, 6342062), (6341343, 6342062)] 2021-10-25 09:34:43.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:43.991 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7694996, 7695072), (7695971, 7696027), (7696206, 7697006), (7696206, 7697976), (7696206, 7697400), (7696206, 7696593), (7696206, 7698373), (7696807, 7698724), (7697157, 7698724), (7697581, 7698724), (7698130, 7698724), (7698551, 7698724), (7698992, 7699054), (7699316, 7699378), (7700668, 7701359)] 2021-10-25 09:34:43.993 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:43.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19868645, 19868723), (19868864, 19869102), (19869307, 19869367), (19869428, 19870380), (19869428, 19869507)] 2021-10-25 09:34:44.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037177: ['FBtr0078542', 'FBtr0331776'] 2021-10-25 09:34:44.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003900: ['FBtr0071953', 'FBtr0100130', 'FBtr0345653'] 2021-10-25 09:34:44.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:44.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262519: ['FBtr0074919', 'FBtr0100394', 'FBtr0302046', 'FBtr0332152'] 2021-10-25 09:34:44.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029867: ['FBtr0070905'] 2021-10-25 09:34:44.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029867 has a single transcript. 2021-10-25 09:34:44.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22985491, 22985553), (22985726, 23046127), (23047705, 23047826)] 2021-10-25 09:34:44.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037178: ['FBtr0078541'] 2021-10-25 09:34:44.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037178 has a single transcript. 2021-10-25 09:34:44.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029868: ['FBtr0070924', 'FBtr0340026', 'FBtr0347282'] 2021-10-25 09:34:44.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037179: ['FBtr0078519'] 2021-10-25 09:34:44.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037179 has a single transcript. 2021-10-25 09:34:44.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033507: ['FBtr0088348'] 2021-10-25 09:34:44.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033507 has a single transcript. 2021-10-25 09:34:44.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037180: ['FBtr0078520'] 2021-10-25 09:34:44.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037180 has a single transcript. 2021-10-25 09:34:44.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033508: ['FBtr0088359'] 2021-10-25 09:34:44.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033508 has a single transcript. 2021-10-25 09:34:44.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037181: ['FBtr0078522', 'FBtr0330172'] 2021-10-25 09:34:44.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033512: ['FBtr0088356', 'FBtr0088357', 'FBtr0305905'] 2021-10-25 09:34:44.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041183: ['FBtr0080811'] 2021-10-25 09:34:44.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041183 has a single transcript. 2021-10-25 09:34:44.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22712383, 22712501), (22712672, 22712752), (22712672, 22712737)] 2021-10-25 09:34:44.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6350054, 6350121), (6350238, 6350292)] 2021-10-25 09:34:44.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041184: ['FBtr0081040', 'FBtr0329927', 'FBtr0329928'] 2021-10-25 09:34:44.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19882297, 19882364), (19882588, 19882653), (19888104, 19888231), (19888475, 19888537), (19888478, 19888537), (19888614, 19888700), (19888614, 19910042)] 2021-10-25 09:34:44.215 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19882050, 19882588, 'FBtr0100394_exon_5') contains intron (19882297, 19882364) 2021-10-25 09:34:44.216 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19882050, 19882588, 'FBtr0302046_exon_5') contains intron (19882297, 19882364) 2021-10-25 09:34:44.216 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19882050, 19882588, 'FBtr0332152_exon_5') contains intron (19882297, 19882364) 2021-10-25 09:34:44.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100394_exon_5', 'FBtr0302046_exon_5', 'FBtr0332152_exon_5'] 2021-10-25 09:34:44.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10355288, 10355500), (10355439, 10355500)] 2021-10-25 09:34:44.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003916: ['FBtr0078028'] 2021-10-25 09:34:44.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003916 has a single transcript. 2021-10-25 09:34:44.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003920: ['FBtr0074208'] 2021-10-25 09:34:44.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003920 has a single transcript. 2021-10-25 09:34:44.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003922: ['FBtr0081313'] 2021-10-25 09:34:44.262 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003922 has a single transcript. 2021-10-25 09:34:44.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003923: ['FBtr0081293'] 2021-10-25 09:34:44.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003923 has a single transcript. 2021-10-25 09:34:44.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037182: ['FBtr0078539', 'FBtr0078540', 'FBtr0113186', 'FBtr0331775', 'FBtr0330173', 'FBtr0330174', 'FBtr0330175'] 2021-10-25 09:34:44.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003926: ['FBtr0077928'] 2021-10-25 09:34:44.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003926 has a single transcript. 2021-10-25 09:34:44.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18140154, 18140442), (18141250, 18141743), (18142580, 18152039), (18142580, 18152208)] 2021-10-25 09:34:44.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003930: ['FBtr0081489'] 2021-10-25 09:34:44.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003930 has a single transcript. 2021-10-25 09:34:44.290 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081040': ['FBtr0329928']} 2021-10-25 09:34:44.291 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329928']] 2021-10-25 09:34:44.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003931: ['FBtr0081292'] 2021-10-25 09:34:44.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003931 has a single transcript. 2021-10-25 09:34:44.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029870: ['FBtr0070909', 'FBtr0070910', 'FBtr0343373'] 2021-10-25 09:34:44.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003933: ['FBtr0074249'] 2021-10-25 09:34:44.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003933 has a single transcript. 2021-10-25 09:34:44.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003934: ['FBtr0077658'] 2021-10-25 09:34:44.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003934 has a single transcript. 2021-10-25 09:34:44.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003935: ['FBtr0080451'] 2021-10-25 09:34:44.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003935 has a single transcript. 2021-10-25 09:34:44.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003936: ['FBtr0080770'] 2021-10-25 09:34:44.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003936 has a single transcript. 2021-10-25 09:34:44.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033515: ['FBtr0088323'] 2021-10-25 09:34:44.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033515 has a single transcript. 2021-10-25 09:34:44.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041186: ['FBtr0085409'] 2021-10-25 09:34:44.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041186 has a single transcript. 2021-10-25 09:34:44.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003938: ['FBtr0073017'] 2021-10-25 09:34:44.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003938 has a single transcript. 2021-10-25 09:34:44.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033516: ['FBtr0088321'] 2021-10-25 09:34:44.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033516 has a single transcript. 2021-10-25 09:34:44.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041188: ['FBtr0083099', 'FBtr0083100', 'FBtr0083101', 'FBtr0344377'] 2021-10-25 09:34:44.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033518: ['FBtr0088259'] 2021-10-25 09:34:44.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033518 has a single transcript. 2021-10-25 09:34:44.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003941: ['FBtr0077470', 'FBtr0334787'] 2021-10-25 09:34:44.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033519: ['FBtr0088316', 'FBtr0329867', 'FBtr0329868'] 2021-10-25 09:34:44.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6366071, 6366632), (6366232, 6366632), (6367163, 6367358), (6367648, 6367718), (6368057, 6368331), (6368057, 6368525), (6368343, 6368525), (6369452, 6369521), (6369692, 6369792), (6369989, 6370058)] 2021-10-25 09:34:44.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262524: ['FBtr0331792', 'FBtr0075960'] 2021-10-25 09:34:44.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085438: ['FBtr0331694'] 2021-10-25 09:34:44.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085438 has a single transcript. 2021-10-25 09:34:44.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4227749, 4228011), (4227807, 4228011)] 2021-10-25 09:34:44.411 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12524070, 12524426)] 2021-10-25 09:34:44.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085440: ['FBtr0340300', 'FBtr0300364'] 2021-10-25 09:34:44.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22715089, 22715154), (22715998, 22716055), (22716202, 22716568), (22716202, 22716297), (22716202, 22716306), (22716205, 22716568), (22716205, 22716297), (22716414, 22716568), (22716892, 22716970), (22717066, 22717193), (22717080, 22717193), (22717349, 22717490), (22717363, 22717490)] 2021-10-25 09:34:44.437 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22716970, 22717363, 'FBtr0078539_exon_2') contains intron (22717066, 22717193) 2021-10-25 09:34:44.437 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22716970, 22717349, 'FBtr0113186_exon_2') contains intron (22717066, 22717193) 2021-10-25 09:34:44.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078539_exon_2', 'FBtr0113186_exon_2'] 2021-10-25 09:34:44.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.439 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10420572, 10420630), (10420969, 10421172), (10421047, 10421102), (10421691, 10423597), (10421691, 10421857)] 2021-10-25 09:34:44.440 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15409189, 15412120), (15409534, 15412120), (15410911, 15412120), (15412521, 15412578), (15413512, 15413568), (15414974, 15415103)] 2021-10-25 09:34:44.448 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15413568, 15416472, 'FBtr0083101_exon_4') contains intron (15414974, 15415103) 2021-10-25 09:34:44.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083101_exon_4'] 2021-10-25 09:34:44.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13162207, 13162282), (13162356, 13162414), (13162569, 13162627), (13162772, 13163064), (13163179, 13163255), (13163491, 13165839), (13165956, 13166049), (13166193, 13167169), (13167241, 13167360), (13167504, 13167578), (13167650, 13167721), (13167793, 13170019), (13170091, 13170257), (13170335, 13172312), (13172384, 13172506), (13172618, 13172740), (13173181, 13188804), (13173181, 13188909)] 2021-10-25 09:34:44.472 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003942: ['FBtr0080016'] 2021-10-25 09:34:44.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003942 has a single transcript. 2021-10-25 09:34:44.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029873: ['FBtr0070912'] 2021-10-25 09:34:44.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029873 has a single transcript. 2021-10-25 09:34:44.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029874: ['FBtr0070918'] 2021-10-25 09:34:44.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029874 has a single transcript. 2021-10-25 09:34:44.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262527: ['FBtr0309859', 'FBtr0309860', 'FBtr0309861', 'FBtr0309862', 'FBtr0309863', 'FBtr0301726', 'FBtr0301730', 'FBtr0301727', 'FBtr0301732', 'FBtr0301731', 'FBtr0301728', 'FBtr0334592'] 2021-10-25 09:34:44.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003943: ['FBtr0073177', 'FBtr0073179', 'FBtr0073178', 'FBtr0333142'] 2021-10-25 09:34:44.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029877: ['FBtr0070943', 'FBtr0070944'] 2021-10-25 09:34:44.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033520: ['FBtr0088261'] 2021-10-25 09:34:44.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033520 has a single transcript. 2021-10-25 09:34:44.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085442: ['FBtr0305056', 'FBtr0301847', 'FBtr0301848', 'FBtr0301849', 'FBtr0301850', 'FBtr0301851', 'FBtr0343497'] 2021-10-25 09:34:44.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6589832, 6590032), (6589832, 6590050), (6590248, 6590313)] 2021-10-25 09:34:44.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033521: ['FBtr0088315'] 2021-10-25 09:34:44.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033521 has a single transcript. 2021-10-25 09:34:44.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033523: ['FBtr0088314', 'FBtr0330615'] 2021-10-25 09:34:44.591 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3901770, 3901852), (3901770, 3903003), (3901770, 3902526), (3902707, 3902854)] 2021-10-25 09:34:44.592 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.592 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041191: ['FBtr0078693', 'FBtr0078694'] 2021-10-25 09:34:44.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029878: ['FBtr0070945', 'FBtr0331599', 'FBtr0331600'] 2021-10-25 09:34:44.612 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10437019, 10437081), (10437263, 10437319)] 2021-10-25 09:34:44.613 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.613 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.642 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5569039, 5569205), (5569271, 5569399), (5569471, 5569574), (5569782, 5569841), (5569971, 5570027)] 2021-10-25 09:34:44.643 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5568920, 5569271, 'FBtr0078693_exon_1') contains intron (5569039, 5569205) 2021-10-25 09:34:44.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078693_exon_1'] 2021-10-25 09:34:44.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6591005, 6591445), (6591763, 6593360), (6593947, 6594088), (6594313, 6594383), (6594485, 6594564), (6595241, 6595313), (6595471, 6595535), (6595471, 6595538), (6595960, 6596017)] 2021-10-25 09:34:44.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6595535, 6596954, 'FBtr0070945_exon_8') contains intron (6595960, 6596017) 2021-10-25 09:34:44.675 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6595538, 6596630, 'FBtr0331599_exon_8') contains intron (6595960, 6596017) 2021-10-25 09:34:44.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070945_exon_8', 'FBtr0331599_exon_8'] 2021-10-25 09:34:44.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033524: ['FBtr0088311', 'FBtr0088312', 'FBtr0088313', 'FBtr0304592'] 2021-10-25 09:34:44.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24881626, 24882630), (24881682, 24882630), (24881947, 24882630), (24883019, 24883076), (24883214, 24883277), (24883358, 24883420), (24883612, 24883673), (24883734, 24887222), (24883734, 24884525), (24884580, 24887222), (24887144, 24887222)] 2021-10-25 09:34:44.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041194: ['FBtr0076945', 'FBtr0076946'] 2021-10-25 09:34:44.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037183: ['FBtr0078538'] 2021-10-25 09:34:44.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037183 has a single transcript. 2021-10-25 09:34:44.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037184: ['FBtr0078537', 'FBtr0310503'] 2021-10-25 09:34:44.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003944: ['FBtr0083347', 'FBtr0083348', 'FBtr0083349', 'FBtr0083350', 'FBtr0083351', 'FBtr0083352'] 2021-10-25 09:34:44.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6913527, 6914413), (6913527, 6913756), (6914580, 6914640)] 2021-10-25 09:34:44.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15793847, 15794828), (15793953, 15794828), (15794029, 15794828), (15794049, 15794828), (15794053, 15794828), (15794200, 15794828), (15795579, 15795645), (15796891, 15797297), (15797794, 15798086), (15798404, 15798723), (15798404, 15798720), (15798410, 15798720), (15798410, 15798723), (15798467, 15798723), (15798467, 15798720), (15798477, 15798723), (15798477, 15798720), (15799036, 15799145), (15799262, 15799375), (15800300, 15800463)] 2021-10-25 09:34:44.759 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10449800, 10449879), (10450001, 10450420), (10450526, 10450591), (10450670, 10450744), (10450914, 10450978), (10451153, 10451222), (10451418, 10451922), (10451999, 10452087), (10452204, 10452297), (10452378, 10455283), (10455449, 10455522), (10455686, 10455924), (10456157, 10458678), (10456157, 10458072), (10456157, 10458438)] 2021-10-25 09:34:44.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15798086, 15799036, 'FBtr0301732_exon_5') contains intron (15798404, 15798723) 2021-10-25 09:34:44.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301732_exon_5'] 2021-10-25 09:34:44.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.767 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22727477, 22727531), (22727477, 22727527)] 2021-10-25 09:34:44.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.768 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029879: ['FBtr0070946', 'FBtr0070947'] 2021-10-25 09:34:44.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041195: ['FBtr0080365'] 2021-10-25 09:34:44.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041195 has a single transcript. 2021-10-25 09:34:44.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041205: ['FBtr0072428', 'FBtr0305672'] 2021-10-25 09:34:44.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6597195, 6597265), (6597773, 6597933), (6598604, 6598674), (6598955, 6599025)] 2021-10-25 09:34:44.820 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6597182, 6597773, 'FBtr0070947_exon_1') contains intron (6597195, 6597265) 2021-10-25 09:34:44.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070947_exon_1'] 2021-10-25 09:34:44.821 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037185: ['FBtr0078528'] 2021-10-25 09:34:44.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037185 has a single transcript. 2021-10-25 09:34:44.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037186: ['FBtr0078536', 'FBtr0113188', 'FBtr0347061'] 2021-10-25 09:34:44.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24785683, 24785735), (24785683, 24785741), (24786095, 24786238), (24786543, 24786601), (24786704, 24786768), (24787130, 24787290)] 2021-10-25 09:34:44.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.846 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16659073, 16732724), (16659073, 16732697), (16659073, 16710561), (16710612, 16732697), (16710612, 16725255), (16710612, 16732724), (16725306, 16732724), (16725306, 16732697)] 2021-10-25 09:34:44.868 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029880: ['FBtr0308654'] 2021-10-25 09:34:44.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029880 has a single transcript. 2021-10-25 09:34:44.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029881: ['FBtr0070948', 'FBtr0308653', 'FBtr0343375'] 2021-10-25 09:34:44.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22733588, 22734908), (22734736, 22734908), (22735983, 22736441), (22736766, 22738247)] 2021-10-25 09:34:44.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033526: ['FBtr0088310'] 2021-10-25 09:34:44.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033526 has a single transcript. 2021-10-25 09:34:44.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033527: ['FBtr0088273'] 2021-10-25 09:34:44.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033527 has a single transcript. 2021-10-25 09:34:44.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041210: ['FBtr0073798', 'FBtr0301298', 'FBtr0301299', 'FBtr0333331', 'FBtr0333332', 'FBtr0333333', 'FBtr0333334', 'FBtr0308576'] 2021-10-25 09:34:44.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033528: ['FBtr0088306'] 2021-10-25 09:34:44.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033528 has a single transcript. 2021-10-25 09:34:44.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033529: ['FBtr0088274'] 2021-10-25 09:34:44.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033529 has a single transcript. 2021-10-25 09:34:44.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033538: ['FBtr0088284', 'FBtr0088283', 'FBtr0113063', 'FBtr0339461'] 2021-10-25 09:34:44.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6600510, 6605179), (6602727, 6605179), (6605279, 6630704), (6631105, 6644561), (6644758, 6644827), (6644946, 6645042), (6645338, 6648016), (6648124, 6648184), (6648381, 6648501), (6649142, 6649205)] 2021-10-25 09:34:44.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:44.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:44.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037188: ['FBtr0078530'] 2021-10-25 09:34:44.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037188 has a single transcript. 2021-10-25 09:34:45.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037191: ['FBtr0078534'] 2021-10-25 09:34:45.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037191 has a single transcript. 2021-10-25 09:34:45.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085443: ['FBtr0112688', 'FBtr0112689', 'FBtr0112690', 'FBtr0310291', 'FBtr0310292', 'FBtr0310293', 'FBtr0310295', 'FBtr0310296', 'FBtr0310438', 'FBtr0310439', 'FBtr0336902', 'FBtr0336903', 'FBtr0336904'] 2021-10-25 09:34:45.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037195: ['FBtr0078546'] 2021-10-25 09:34:45.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037195 has a single transcript. 2021-10-25 09:34:45.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037197: ['FBtr0078548'] 2021-10-25 09:34:45.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037197 has a single transcript. 2021-10-25 09:34:45.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10617836, 10619890), (10619999, 10637520), (10619999, 10637955), (10622277, 10637523), (10637728, 10637955), (10638562, 10638625), (10638712, 10638765), (10639329, 10639467), (10639982, 10640045), (10640285, 10640353), (10640449, 10640513), (10640584, 10640665)] 2021-10-25 09:34:45.031 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10640513, 10640990, 'FBtr0088283_exon_9') contains intron (10640584, 10640665) 2021-10-25 09:34:45.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037199: ['FBtr0078577', 'FBtr0347060'] 2021-10-25 09:34:45.031 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10640513, 10640990, 'FBtr0113063_exon_9') contains intron (10640584, 10640665) 2021-10-25 09:34:45.032 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10640513, 10641807, 'FBtr0339461_exon_10') contains intron (10640584, 10640665) 2021-10-25 09:34:45.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088283_exon_9', 'FBtr0113063_exon_9', 'FBtr0339461_exon_10'] 2021-10-25 09:34:45.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029882: ['FBtr0070993'] 2021-10-25 09:34:45.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029882 has a single transcript. 2021-10-25 09:34:45.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029885: ['FBtr0070992'] 2021-10-25 09:34:45.075 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029885 has a single transcript. 2021-10-25 09:34:45.076 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22867854, 22867906), (22868036, 22868096)] 2021-10-25 09:34:45.076 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029887: ['FBtr0070991'] 2021-10-25 09:34:45.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029887 has a single transcript. 2021-10-25 09:34:45.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003950: ['FBtr0077259', 'FBtr0340040'] 2021-10-25 09:34:45.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029888: ['FBtr0070990', 'FBtr0100409', 'FBtr0343330'] 2021-10-25 09:34:45.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13265036, 13265129), (13265263, 13265332), (13265767, 13265837), (13265957, 13266039), (13267254, 13267321), (13268262, 13268693), (13268262, 13269827), (13268840, 13269827), (13269958, 13270246), (13270320, 13270390), (13270612, 13271481), (13270642, 13271481), (13270693, 13271481), (13271589, 13272401), (13271589, 13276434), (13271589, 13282165), (13276547, 13282165), (13276547, 13284891), (13276547, 13285202), (13282229, 13284891), (13282229, 13285202), (13284962, 13285202)] 2021-10-25 09:34:45.099 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13284891, 13285632, 'FBtr0333331_exon_1') contains intron (13284962, 13285202) 2021-10-25 09:34:45.100 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13284891, 13285632, 'FBtr0333332_exon_1') contains intron (13284962, 13285202) 2021-10-25 09:34:45.101 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13284891, 13285632, 'FBtr0333333_exon_1') contains intron (13284962, 13285202) 2021-10-25 09:34:45.102 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333331_exon_1', 'FBtr0333332_exon_1', 'FBtr0333333_exon_1'] 2021-10-25 09:34:45.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21112608, 21112670), (21112967, 21113030), (21113668, 21113775), (21115340, 21115455), (21115740, 21116033), (21116629, 21116715)] 2021-10-25 09:34:45.135 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.135 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037200: ['FBtr0078552', 'FBtr0078553'] 2021-10-25 09:34:45.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6677575, 6677651), (6677881, 6677999), (6678197, 6678539)] 2021-10-25 09:34:45.161 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22872346, 22872434)] 2021-10-25 09:34:45.179 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22872257, 22873702, 'FBtr0078553_exon_1') contains intron (22872346, 22872434) 2021-10-25 09:34:45.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078553_exon_1'] 2021-10-25 09:34:45.179 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003961: ['FBtr0079486'] 2021-10-25 09:34:45.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003961 has a single transcript. 2021-10-25 09:34:45.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033539: ['FBtr0088258'] 2021-10-25 09:34:45.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033539 has a single transcript. 2021-10-25 09:34:45.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003963: ['FBtr0078063', 'FBtr0310027', 'FBtr0329895', 'FBtr0333012', 'FBtr0333013'] 2021-10-25 09:34:45.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033540: ['FBtr0088212'] 2021-10-25 09:34:45.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033540 has a single transcript. 2021-10-25 09:34:45.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033541: ['FBtr0088213', 'FBtr0339462'] 2021-10-25 09:34:45.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037202: ['FBtr0078554', 'FBtr0332051'] 2021-10-25 09:34:45.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262528: ['FBtr0304968'] 2021-10-25 09:34:45.257 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262528 has a single transcript. 2021-10-25 09:34:45.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:45.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262529: ['FBtr0304969'] 2021-10-25 09:34:45.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262529 has a single transcript. 2021-10-25 09:34:45.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029890: ['FBtr0070955'] 2021-10-25 09:34:45.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029890 has a single transcript. 2021-10-25 09:34:45.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262530: ['FBtr0304970'] 2021-10-25 09:34:45.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262530 has a single transcript. 2021-10-25 09:34:45.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029891: ['FBtr0070957', 'FBtr0070956', 'FBtr0100413', 'FBtr0100414', 'FBtr0100415', 'FBtr0100416', 'FBtr0100419', 'FBtr0100420', 'FBtr0345295'] 2021-10-25 09:34:45.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262531: ['FBtr0304976', 'FBtr0333122'] 2021-10-25 09:34:45.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22879148, 22879205), (22879430, 22879483), (22879825, 22879877)] 2021-10-25 09:34:45.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.305 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10491147, 10491505), (10492332, 10496789), (10492332, 10492499), (10492332, 10492751), (10492692, 10492751), (10497047, 10497113), (10498145, 10498213), (10499657, 10510335), (10510587, 10519347), (10519777, 10522802), (10519777, 10555202), (10519777, 10575389), (10519777, 10546628), (10523561, 10544385), (10523564, 10575389), (10523564, 10544385), (10544504, 10546628), (10544592, 10546628), (10556751, 10557217), (10576156, 10578238), (10578606, 10584909), (10585073, 10585247), (10585073, 10585325)] 2021-10-25 09:34:45.306 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10584909, 10585422, 'FBtr0112688_exon_1') contains intron (10585073, 10585247) 2021-10-25 09:34:45.306 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10492499, 10493736, 'FBtr0112690_exon_1') contains intron (10492692, 10492751) 2021-10-25 09:34:45.308 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10584909, 10585422, 'FBtr0310439_exon_1') contains intron (10585073, 10585247) 2021-10-25 09:34:45.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112688_exon_1', 'FBtr0112690_exon_1', 'FBtr0310439_exon_1'] 2021-10-25 09:34:45.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(476331, 525391), (476331, 489516), (491358, 525391), (524059, 525391), (525436, 536022), (536966, 537036), (537431, 537548), (537749, 537862), (539249, 539309), (539452, 539517)] 2021-10-25 09:34:45.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033542: ['FBtr0088215'] 2021-10-25 09:34:45.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033542 has a single transcript. 2021-10-25 09:34:45.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17646321, 17646380)] 2021-10-25 09:34:45.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.324 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033543: ['FBtr0088256', 'FBtr0345662'] 2021-10-25 09:34:45.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037203: ['FBtr0078555', 'FBtr0078556', 'FBtr0078557'] 2021-10-25 09:34:45.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262532: ['FBtr0345000', 'FBtr0331812', 'FBtr0304978'] 2021-10-25 09:34:45.385 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10730188, 10730257), (10730403, 10730484), (10730608, 10730673), (10731093, 10731472)] 2021-10-25 09:34:45.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.421 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22881398, 22891364), (22885437, 22891364), (22889395, 22891364), (22892495, 22892562)] 2021-10-25 09:34:45.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.422 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041224: ['FBtr0085081', 'FBtr0345260'] 2021-10-25 09:34:45.443 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17868867, 17869615), (17869947, 17870078), (17870007, 17870078), (17870019, 17870078)] 2021-10-25 09:34:45.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033544: ['FBtr0088218', 'FBtr0088219', 'FBtr0088216', 'FBtr0088217', 'FBtr0339465', 'FBtr0113064'] 2021-10-25 09:34:45.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6683821, 6683897), (6684070, 6684127), (6684070, 6684132), (6684070, 6684218), (6684461, 6684517), (6684461, 6684523), (6684721, 6684785), (6685571, 6685634), (6686648, 6686712)] 2021-10-25 09:34:45.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26965377, 26965428), (26965377, 26965434)] 2021-10-25 09:34:45.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.476 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6683840, 6684461, 'FBtr0100419_exon_1') contains intron (6684070, 6684127) 2021-10-25 09:34:45.476 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6683897, 6684461, 'FBtr0100420_exon_2') contains intron (6684070, 6684127) 2021-10-25 09:34:45.477 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100419_exon_1', 'FBtr0100420_exon_2'] 2021-10-25 09:34:45.477 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003964: ['FBtr0070346', 'FBtr0333803'] 2021-10-25 09:34:45.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037204: ['FBtr0078558', 'FBtr0332052'] 2021-10-25 09:34:45.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041225: ['FBtr0084346'] 2021-10-25 09:34:45.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041225 has a single transcript. 2021-10-25 09:34:45.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262533: ['FBtr0304979', 'FBtr0345859'] 2021-10-25 09:34:45.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041229: ['FBtr0084133'] 2021-10-25 09:34:45.542 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041229 has a single transcript. 2021-10-25 09:34:45.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041231: ['FBtr0076118'] 2021-10-25 09:34:45.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041231 has a single transcript. 2021-10-25 09:34:45.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2041386, 2041460), (2041644, 2042046)] 2021-10-25 09:34:45.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.554 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041232: ['FBtr0300026'] 2021-10-25 09:34:45.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041232 has a single transcript. 2021-10-25 09:34:45.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22899270, 22899410)] 2021-10-25 09:34:45.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041233: ['FBtr0072115'] 2021-10-25 09:34:45.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041233 has a single transcript. 2021-10-25 09:34:45.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041234: ['FBtr0072059'] 2021-10-25 09:34:45.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041234 has a single transcript. 2021-10-25 09:34:45.586 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17874842, 17875630), (17876022, 17876094)] 2021-10-25 09:34:45.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041235: ['FBtr0071977'] 2021-10-25 09:34:45.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041235 has a single transcript. 2021-10-25 09:34:45.587 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.587 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041236: ['FBtr0071976'] 2021-10-25 09:34:45.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041236 has a single transcript. 2021-10-25 09:34:45.600 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10731526, 10731658), (10731552, 10731658), (10731796, 10736656), (10732796, 10735819), (10736055, 10736656), (10736748, 10736892), (10736995, 10737059), (10737291, 10737356)] 2021-10-25 09:34:45.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041237: ['FBtr0071727'] 2021-10-25 09:34:45.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041237 has a single transcript. 2021-10-25 09:34:45.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003965: ['FBtr0073386'] 2021-10-25 09:34:45.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003965 has a single transcript. 2021-10-25 09:34:45.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041238: ['FBtr0071732'] 2021-10-25 09:34:45.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041238 has a single transcript. 2021-10-25 09:34:45.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041239: ['FBtr0071728'] 2021-10-25 09:34:45.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041239 has a single transcript. 2021-10-25 09:34:45.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003969: ['FBtr0074143', 'FBtr0074142', 'FBtr0074140', 'FBtr0074141', 'FBtr0340415', 'FBtr0340416'] 2021-10-25 09:34:45.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037205: ['FBtr0078559'] 2021-10-25 09:34:45.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037205 has a single transcript. 2021-10-25 09:34:45.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041240: ['FBtr0086241'] 2021-10-25 09:34:45.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041240 has a single transcript. 2021-10-25 09:34:45.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041241: ['FBtr0088127'] 2021-10-25 09:34:45.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041241 has a single transcript. 2021-10-25 09:34:45.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037206: ['FBtr0078560', 'FBtr0331396', 'FBtr0331397', 'FBtr0331398'] 2021-10-25 09:34:45.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041242: ['FBtr0303149'] 2021-10-25 09:34:45.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041242 has a single transcript. 2021-10-25 09:34:45.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262534: ['FBtr0304873'] 2021-10-25 09:34:45.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262534 has a single transcript. 2021-10-25 09:34:45.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041243: ['FBtr0089014', 'FBtr0110820', 'FBtr0344883'] 2021-10-25 09:34:45.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262535: ['FBtr0340708', 'FBtr0308636'] 2021-10-25 09:34:45.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3714057, 3714110)] 2021-10-25 09:34:45.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7391084, 7391146), (7391498, 7391554), (7391633, 7391699), (7391840, 7391895), (7392039, 7392141), (7392304, 7392371), (7392504, 7392877), (7392516, 7392877), (7392932, 7392995)] 2021-10-25 09:34:45.725 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7391554, 7391840, 'FBtr0110820_exon_6') contains intron (7391633, 7391699) 2021-10-25 09:34:45.725 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7391554, 7391840, 'FBtr0344883_exon_6') contains intron (7391633, 7391699) 2021-10-25 09:34:45.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110820_exon_6', 'FBtr0344883_exon_6'] 2021-10-25 09:34:45.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22910555, 22911833), (22910572, 22911589), (22910572, 22911833), (22911151, 22911833), (22911755, 22911833), (22912233, 22913263), (22914299, 22923361)] 2021-10-25 09:34:45.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262536: ['FBtr0304876'] 2021-10-25 09:34:45.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262536 has a single transcript. 2021-10-25 09:34:45.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16000585, 16000667), (16000818, 16000883), (16001790, 16001862), (16002712, 16002885), (16003295, 16003376), (16003449, 16003528), (16003642, 16003714), (16004086, 16005621), (16004086, 16005319), (16004086, 16004984), (16004086, 16004327), (16004393, 16005319), (16004444, 16005621), (16004444, 16005319), (16005476, 16005621)] 2021-10-25 09:34:45.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262537: ['FBtr0304881'] 2021-10-25 09:34:45.781 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16005319, 16005812, 'FBtr0074142_exon_1') contains intron (16005476, 16005621) 2021-10-25 09:34:45.781 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262537 has a single transcript. 2021-10-25 09:34:45.781 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16004984, 16005812, 'FBtr0340415_exon_1') contains intron (16005476, 16005621) 2021-10-25 09:34:45.782 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16005319, 16005812, 'FBtr0340416_exon_1') contains intron (16005476, 16005621) 2021-10-25 09:34:45.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074142_exon_1', 'FBtr0340415_exon_1', 'FBtr0340416_exon_1'] 2021-10-25 09:34:45.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262538: ['FBtr0304880'] 2021-10-25 09:34:45.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262538 has a single transcript. 2021-10-25 09:34:45.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262539: ['FBtr0304879'] 2021-10-25 09:34:45.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262539 has a single transcript. 2021-10-25 09:34:45.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262540: ['FBtr0304878'] 2021-10-25 09:34:45.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262540 has a single transcript. 2021-10-25 09:34:45.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262541: ['FBtr0304877'] 2021-10-25 09:34:45.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262541 has a single transcript. 2021-10-25 09:34:45.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262542: ['FBtr0304882'] 2021-10-25 09:34:45.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262542 has a single transcript. 2021-10-25 09:34:45.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029892: ['FBtr0070989'] 2021-10-25 09:34:45.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029892 has a single transcript. 2021-10-25 09:34:45.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262543: ['FBtr0304883', 'FBtr0332244'] 2021-10-25 09:34:45.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029893: ['FBtr0070988', 'FBtr0300772', 'FBtr0339491', 'FBtr0339492', 'FBtr0339493'] 2021-10-25 09:34:45.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041245: ['FBtr0081522'] 2021-10-25 09:34:45.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041245 has a single transcript. 2021-10-25 09:34:45.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041246: ['FBtr0080198'] 2021-10-25 09:34:45.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041246 has a single transcript. 2021-10-25 09:34:45.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033547: ['FBtr0088221', 'FBtr0332886'] 2021-10-25 09:34:45.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041247: ['FBtr0079463'] 2021-10-25 09:34:45.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041247 has a single transcript. 2021-10-25 09:34:45.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085444: ['FBtr0112691', 'FBtr0112692'] 2021-10-25 09:34:45.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041248: ['FBtr0077702', 'FBtr0273435'] 2021-10-25 09:34:45.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19911637, 19911703)] 2021-10-25 09:34:45.879 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19910647, 19911811, 'FBtr0304883_exon_1') contains intron (19911637, 19911703) 2021-10-25 09:34:45.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304883_exon_1'] 2021-10-25 09:34:45.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037207: ['FBtr0078561', 'FBtr0078563'] 2021-10-25 09:34:45.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10810191, 10810250)] 2021-10-25 09:34:45.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2670692, 2671861), (2671804, 2671861), (2672020, 2672075)] 2021-10-25 09:34:45.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16950090, 16950151), (16950480, 16950540), (16950674, 16950741), (16951750, 16952603), (16953075, 16953135), (16954204, 16954258), (16954589, 16954654)] 2021-10-25 09:34:45.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22945940, 22946269), (22946184, 22946269), (22946570, 22950531)] 2021-10-25 09:34:45.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:45.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262544: ['FBtr0304986'] 2021-10-25 09:34:45.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262544 has a single transcript. 2021-10-25 09:34:45.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6691354, 6692402), (6692018, 6692072), (6692113, 6692402), (6692864, 6693110), (6692864, 6692942), (6692864, 6693092)] 2021-10-25 09:34:45.941 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6692402, 6695001, 'FBtr0070988_exon_1') contains intron (6692864, 6693110) 2021-10-25 09:34:45.942 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6692402, 6695007, 'FBtr0339492_exon_1') contains intron (6692864, 6693110) 2021-10-25 09:34:45.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070988_exon_1', 'FBtr0339492_exon_1'] 2021-10-25 09:34:45.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:45.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033548: ['FBtr0088252'] 2021-10-25 09:34:45.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033548 has a single transcript. 2021-10-25 09:34:45.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262546: ['FBtr0343422'] 2021-10-25 09:34:45.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262546 has a single transcript. 2021-10-25 09:34:45.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033549: ['FBtr0088222'] 2021-10-25 09:34:45.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033549 has a single transcript. 2021-10-25 09:34:45.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262547: ['FBtr0304888'] 2021-10-25 09:34:45.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262547 has a single transcript. 2021-10-25 09:34:45.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041249: ['FBtr0077902'] 2021-10-25 09:34:45.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041249 has a single transcript. 2021-10-25 09:34:45.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033550: ['FBtr0088251'] 2021-10-25 09:34:45.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033550 has a single transcript. 2021-10-25 09:34:45.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262559: ['FBtr0083563'] 2021-10-25 09:34:45.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262559 has a single transcript. 2021-10-25 09:34:45.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033551: ['FBtr0088223', 'FBtr0345945'] 2021-10-25 09:34:45.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041250: ['FBtr0078006', 'FBtr0331651'] 2021-10-25 09:34:45.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262560: ['FBtr0087170'] 2021-10-25 09:34:45.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262560 has a single transcript. 2021-10-25 09:34:45.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037213: ['FBtr0078961', 'FBtr0078962'] 2021-10-25 09:34:45.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085446: ['FBtr0112703', 'FBtr0112704', 'FBtr0112706', 'FBtr0112707', 'FBtr0303205', 'FBtr0303206', 'FBtr0336669', 'FBtr0301323', 'FBtr0301324', 'FBtr0336670', 'FBtr0336671', 'FBtr0336672', 'FBtr0345068', 'FBtr0345069', 'FBtr0345070', 'FBtr0336673', 'FBtr0336674', 'FBtr0336675', 'FBtr0336676', 'FBtr0336677', 'FBtr0308093'] 2021-10-25 09:34:45.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262562: ['FBtr0330032', 'FBtr0344631', 'FBtr0305009', 'FBtr0305010', 'FBtr0305011', 'FBtr0305012', 'FBtr0305013'] 2021-10-25 09:34:46.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003975: ['FBtr0087785'] 2021-10-25 09:34:46.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003975 has a single transcript. 2021-10-25 09:34:46.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10813464, 10814030), (10813736, 10814030), (10814214, 10814282), (10814591, 10814873), (10814962, 10815028)] 2021-10-25 09:34:46.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(782048, 782123), (782181, 782237), (782441, 782494)] 2021-10-25 09:34:46.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003977: ['FBtr0072037'] 2021-10-25 09:34:46.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003977 has a single transcript. 2021-10-25 09:34:46.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003978: ['FBtr0081347'] 2021-10-25 09:34:46.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003978 has a single transcript. 2021-10-25 09:34:46.034 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4174787, 4174855), (4176191, 4182061), (4182927, 4183716)] 2021-10-25 09:34:46.035 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4174631, 4176191, 'FBtr0078962_exon_1') contains intron (4174787, 4174855) 2021-10-25 09:34:46.035 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078962_exon_1'] 2021-10-25 09:34:46.035 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003979: ['FBtr0079239', 'FBtr0333232'] 2021-10-25 09:34:46.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041252: ['FBtr0070663'] 2021-10-25 09:34:46.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041252 has a single transcript. 2021-10-25 09:34:46.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033554: ['FBtr0088248'] 2021-10-25 09:34:46.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033554 has a single transcript. 2021-10-25 09:34:46.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041336: ['FBtr0330681'] 2021-10-25 09:34:46.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041336 has a single transcript. 2021-10-25 09:34:46.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033555: ['FBtr0088226'] 2021-10-25 09:34:46.076 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033555 has a single transcript. 2021-10-25 09:34:46.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:46.079 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.079 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041337: ['FBtr0077748'] 2021-10-25 09:34:46.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041337 has a single transcript. 2021-10-25 09:34:46.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033556: ['FBtr0088247'] 2021-10-25 09:34:46.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033556 has a single transcript. 2021-10-25 09:34:46.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037215: ['FBtr0078964', 'FBtr0336702', 'FBtr0336703', 'FBtr0336704', 'FBtr0306022'] 2021-10-25 09:34:46.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033557: ['FBtr0088227', 'FBtr0345930'] 2021-10-25 09:34:46.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041342: ['FBtr0072738', 'FBtr0072739', 'FBtr0072740', 'FBtr0072741', 'FBtr0333396', 'FBtr0345365'] 2021-10-25 09:34:46.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029894: ['FBtr0070987', 'FBtr0310419'] 2021-10-25 09:34:46.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003980: ['FBtr0079171', 'FBtr0345439'] 2021-10-25 09:34:46.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10823717, 10823770), (10823883, 10823938), (10825204, 10825262), (10825602, 10825667), (10825813, 10825870), (10826018, 10826079), (10826314, 10826378), (10826540, 10826897), (10827114, 10827174)] 2021-10-25 09:34:46.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17770253, 17770312), (17770663, 17770723), (17770845, 17770906), (17771049, 17771107), (17771175, 17771236), (17771388, 17771447), (17772088, 17772151), (17772243, 17772373), (17772596, 17772659), (17773105, 17773168), (17773359, 17773477), (17773738, 17777947), (17773738, 17773831), (17778536, 17778591), (17780786, 17782213), (17783862, 17783934), (17784095, 17794182), (17784095, 17784537), (17784095, 17794292), (17784663, 17794182)] 2021-10-25 09:34:46.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:46.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:46.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.187 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330032': ['FBtr0305010']} 2021-10-25 09:34:46.188 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0305010']] 2021-10-25 09:34:46.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4197301, 4197414), (4197562, 4197736), (4197871, 4198220), (4197871, 4198258), (4198772, 4198829), (4198926, 4199004), (4199293, 4201842), (4202322, 4202375), (4202797, 4203781), (4204162, 4204218), (4204162, 4204212)] 2021-10-25 09:34:46.196 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197205, 4197562, 'FBtr0078964_exon_1') contains intron (4197301, 4197414) 2021-10-25 09:34:46.196 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197307, 4197871, 'FBtr0336702_exon_1') contains intron (4197562, 4197736) 2021-10-25 09:34:46.196 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197205, 4197562, 'FBtr0336703_exon_1') contains intron (4197301, 4197414) 2021-10-25 09:34:46.197 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197205, 4197562, 'FBtr0336704_exon_1') contains intron (4197301, 4197414) 2021-10-25 09:34:46.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078964_exon_1', 'FBtr0336702_exon_1', 'FBtr0336703_exon_1', 'FBtr0336704_exon_1'] 2021-10-25 09:34:46.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033558: ['FBtr0088246', 'FBtr0339476', 'FBtr0339477', 'FBtr0339478'] 2021-10-25 09:34:46.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003983: ['FBtr0080521'] 2021-10-25 09:34:46.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003983 has a single transcript. 2021-10-25 09:34:46.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029895: ['FBtr0070959', 'FBtr0332892', 'FBtr0332893', 'FBtr0332894'] 2021-10-25 09:34:46.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003984: ['FBtr0077082', 'FBtr0300010'] 2021-10-25 09:34:46.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1546306, 1550713), (1546306, 1546598), (1546676, 1550713), (1547589, 1550713), (1548400, 1550713), (1549910, 1550713), (1551288, 1551477), (1551801, 1551864)] 2021-10-25 09:34:46.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5813474, 5816650), (5814866, 5816646), (5816700, 5817534), (5817643, 5817897), (5818025, 5818108), (5818286, 5842207)] 2021-10-25 09:34:46.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.310 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6699574, 6699910), (6699574, 6700052), (6700353, 6709378), (6709275, 6709378), (6709896, 6712278), (6713336, 6713396), (6713495, 6713561), (6713678, 6713742), (6714690, 6715863), (6715923, 6715988)] 2021-10-25 09:34:46.311 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6699507, 6700353, 'FBtr0070959_exon_1') contains intron (6699574, 6699910) 2021-10-25 09:34:46.311 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070959_exon_1'] 2021-10-25 09:34:46.311 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10828856, 10828954), (10829059, 10829137), (10829059, 10829149), (10829266, 10829381), (10829746, 10829804), (10829960, 10831377), (10831532, 10831613), (10831713, 10833124), (10833201, 10833807), (10833962, 10835647), (10833962, 10834062)] 2021-10-25 09:34:46.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003996: ['FBtr0070490'] 2021-10-25 09:34:46.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0003996 has a single transcript. 2021-10-25 09:34:46.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0003997: ['FBtr0075133', 'FBtr0332862'] 2021-10-25 09:34:46.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037217: ['FBtr0078988', 'FBtr0111206'] 2021-10-25 09:34:46.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18170091, 18172059), (18172372, 18173046), (18173554, 18184791)] 2021-10-25 09:34:46.411 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4205785, 4215122), (4205785, 4215145)] 2021-10-25 09:34:46.434 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262563: ['FBtr0304891'] 2021-10-25 09:34:46.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262563 has a single transcript. 2021-10-25 09:34:46.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262564: ['FBtr0347233', 'FBtr0347234'] 2021-10-25 09:34:46.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004003: ['FBtr0086510', 'FBtr0340470'] 2021-10-25 09:34:46.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041579: ['FBtr0305795'] 2021-10-25 09:34:46.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041579 has a single transcript. 2021-10-25 09:34:46.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029896: ['FBtr0070984', 'FBtr0070985', 'FBtr0070986', 'FBtr0340265', 'FBtr0340266', 'FBtr0340267', 'FBtr0340268'] 2021-10-25 09:34:46.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041581: ['FBtr0087438', 'FBtr0300942'] 2021-10-25 09:34:46.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6541327, 6543092), (6543160, 6551905), (6546472, 6551905), (6552293, 6552638), (6552293, 6560374), (6554771, 6554908), (6554771, 6555865), (6554771, 6560374), (6555259, 6555865), (6555259, 6560374), (6561550, 6561625), (6561550, 6561628), (6562159, 6562224), (6562364, 6576443), (6562364, 6576789), (6572268, 6576789), (6576569, 6576789), (6576957, 6577036), (6577112, 6577288), (6577112, 6577943), (6577112, 6585695), (6577112, 6585692), (6577388, 6577943), (6578291, 6585692), (6578291, 6585695), (6583178, 6585692), (6583343, 6585695), (6584022, 6585692), (6584022, 6585695), (6585785, 6585847), (6585950, 6586956), (6585950, 6588066), (6587104, 6588066), (6588218, 6588303), (6588250, 6588303)] 2021-10-25 09:34:46.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037218: ['FBtr0078965', 'FBtr0078966', 'FBtr0336705', 'FBtr0336706'] 2021-10-25 09:34:46.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033564: ['FBtr0339471', 'FBtr0339472'] 2021-10-25 09:34:46.508 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.518 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16737442, 16737491), (16737442, 16737716)] 2021-10-25 09:34:46.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19250100, 19250304)] 2021-10-25 09:34:46.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14749508, 14749572)] 2021-10-25 09:34:46.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.556 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10880033, 10880136), (10880033, 10880327), (10880269, 10880327), (10880840, 10880903), (10881659, 10881711)] 2021-10-25 09:34:46.557 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004034: ['FBtr0070071'] 2021-10-25 09:34:46.584 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004034 has a single transcript. 2021-10-25 09:34:46.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041582: ['FBtr0072281', 'FBtr0072282', 'FBtr0343438'] 2021-10-25 09:34:46.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262565: ['FBtr0306724'] 2021-10-25 09:34:46.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262565 has a single transcript. 2021-10-25 09:34:46.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004045: ['FBtr0071419', 'FBtr0346261'] 2021-10-25 09:34:46.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4211812, 4211907), (4211915, 4217443), (4217567, 4218246), (4218314, 4221117), (4221317, 4221755), (4221317, 4221779), (4221986, 4222057), (4222197, 4222257), (4223190, 4224598), (4225008, 4225065), (4225439, 4225533), (4225439, 4225497), (4226459, 4226529), (4226691, 4226750)] 2021-10-25 09:34:46.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262566: ['FBtr0304889'] 2021-10-25 09:34:46.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262566 has a single transcript. 2021-10-25 09:34:46.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262567: ['FBtr0304890'] 2021-10-25 09:34:46.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262567 has a single transcript. 2021-10-25 09:34:46.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033566: ['FBtr0089729', 'FBtr0089728', 'FBtr0339473'] 2021-10-25 09:34:46.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262568: ['FBtr0304895'] 2021-10-25 09:34:46.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10054136, 10054213)] 2021-10-25 09:34:46.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262568 has a single transcript. 2021-10-25 09:34:46.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262569: ['FBtr0304896'] 2021-10-25 09:34:46.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262569 has a single transcript. 2021-10-25 09:34:46.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262570: ['FBtr0345650', 'FBtr0304897'] 2021-10-25 09:34:46.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24128613, 24128679), (24129948, 24130013), (24130213, 24130275), (24130437, 24131594), (24130437, 24132996)] 2021-10-25 09:34:46.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6722692, 6723379), (6724100, 6724208), (6724382, 6727708), (6724382, 6737805), (6724382, 6726599), (6724382, 6730355), (6724382, 6727099), (6724382, 6739489), (6727792, 6730355), (6738003, 6739489)] 2021-10-25 09:34:46.659 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.659 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004047: ['FBtr0073821', 'FBtr0346090'] 2021-10-25 09:34:46.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10885247, 10885321), (10885532, 10885589), (10885532, 10885607), (10886152, 10886210)] 2021-10-25 09:34:46.702 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10885216, 10885532, 'FBtr0089728_exon_1') contains intron (10885247, 10885321) 2021-10-25 09:34:46.702 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10885216, 10885532, 'FBtr0339473_exon_1') contains intron (10885247, 10885321) 2021-10-25 09:34:46.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089728_exon_1', 'FBtr0339473_exon_1'] 2021-10-25 09:34:46.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17482564, 17482618), (17482725, 17482790), (17482839, 17482905), (17483433, 17483491), (17483637, 17483697), (17483740, 17483821)] 2021-10-25 09:34:46.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13759806, 13759868), (13760251, 13760323)] 2021-10-25 09:34:46.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037220: ['FBtr0078985'] 2021-10-25 09:34:46.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037220 has a single transcript. 2021-10-25 09:34:46.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041585: ['FBtr0086795', 'FBtr0086797', 'FBtr0114614', 'FBtr0336698', 'FBtr0336699'] 2021-10-25 09:34:46.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037222: ['FBtr0089687', 'FBtr0089688', 'FBtr0309258'] 2021-10-25 09:34:46.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262571: ['FBtr0304898'] 2021-10-25 09:34:46.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262571 has a single transcript. 2021-10-25 09:34:46.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262572: ['FBtr0304907'] 2021-10-25 09:34:46.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262572 has a single transcript. 2021-10-25 09:34:46.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262574: ['FBtr0339482', 'FBtr0304945'] 2021-10-25 09:34:46.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004049: ['FBtr0082793', 'FBtr0114374', 'FBtr0114375', 'FBtr0114376'] 2021-10-25 09:34:46.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033569: ['FBtr0088236'] 2021-10-25 09:34:46.807 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033569 has a single transcript. 2021-10-25 09:34:46.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033570: ['FBtr0088238', 'FBtr0331936'] 2021-10-25 09:34:46.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4241132, 4241252), (4241698, 4241754), (4241919, 4241977), (4242087, 4242174), (4242087, 4242157), (4242273, 4242337)] 2021-10-25 09:34:46.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4241252, 4241919, 'FBtr0089688_exon_4') contains intron (4241698, 4241754) 2021-10-25 09:34:46.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089688_exon_4'] 2021-10-25 09:34:46.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11310916, 11310979), (11310916, 11310973)] 2021-10-25 09:34:46.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10897417, 10897471), (10897587, 10897663)] 2021-10-25 09:34:46.865 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13429769, 13430097), (13429769, 13430922), (13429769, 13430192), (13430750, 13430922), (13431089, 13431198), (13431353, 13431668), (13431353, 13431414), (13431534, 13431668), (13431803, 13431864), (13432933, 13433064), (13433241, 13433306), (13433454, 13434047)] 2021-10-25 09:34:46.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17843964, 17844190), (17843964, 17851057), (17844415, 17851057), (17851460, 17857641), (17851460, 17855139), (17857797, 17859257)] 2021-10-25 09:34:46.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:46.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262575: ['FBtr0304946'] 2021-10-25 09:34:46.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262575 has a single transcript. 2021-10-25 09:34:46.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262576: ['FBtr0305046'] 2021-10-25 09:34:46.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262576 has a single transcript. 2021-10-25 09:34:46.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029897: ['FBtr0070980', 'FBtr0070981', 'FBtr0070982', 'FBtr0070983', 'FBtr0345292'] 2021-10-25 09:34:46.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037223: ['FBtr0113190'] 2021-10-25 09:34:46.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037223 has a single transcript. 2021-10-25 09:34:46.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033571: ['FBtr0088237', 'FBtr0331935'] 2021-10-25 09:34:46.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262577: ['FBtr0305048'] 2021-10-25 09:34:46.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262577 has a single transcript. 2021-10-25 09:34:46.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037224: ['FBtr0078975'] 2021-10-25 09:34:46.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037224 has a single transcript. 2021-10-25 09:34:46.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037225: ['FBtr0078982', 'FBtr0336709', 'FBtr0346145'] 2021-10-25 09:34:46.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262579: ['FBtr0333948', 'FBtr0304993', 'FBtr0304994', 'FBtr0304995', 'FBtr0304996', 'FBtr0304997', 'FBtr0304998', 'FBtr0304999'] 2021-10-25 09:34:46.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:46.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:46.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4249017, 4249190), (4249845, 4249906), (4250514, 4250734)] 2021-10-25 09:34:47.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004050: ['FBtr0070435', 'FBtr0100380', 'FBtr0331161'] 2021-10-25 09:34:47.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6742256, 6743057), (6743148, 6744108), (6743148, 6744195), (6743148, 6744145), (6743148, 6743949)] 2021-10-25 09:34:47.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033572: ['FBtr0088198', 'FBtr0339474'] 2021-10-25 09:34:47.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10903734, 10903793), (10903859, 10903944), (10904095, 10904157), (10904099, 10904157), (10904637, 10904697), (10904876, 10905045), (10904876, 10904997), (10905170, 10905231)] 2021-10-25 09:34:47.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.072 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041588: ['FBtr0085410'] 2021-10-25 09:34:47.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041588 has a single transcript. 2021-10-25 09:34:47.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041604: ['FBtr0075679', 'FBtr0333032'] 2021-10-25 09:34:47.094 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2448664, 2448785), (2449327, 2449389)] 2021-10-25 09:34:47.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.095 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.103 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0100380': ['FBtr0331161']} 2021-10-25 09:34:47.103 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331161']] 2021-10-25 09:34:47.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037227: ['FBtr0078976'] 2021-10-25 09:34:47.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037227 has a single transcript. 2021-10-25 09:34:47.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037228: ['FBtr0336480', 'FBtr0336481'] 2021-10-25 09:34:47.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14633382, 14664295), (14664460, 14664835), (14665070, 14667258), (14667415, 14667474), (14667741, 14669295), (14669843, 14669903), (14670073, 14670172), (14670073, 14670175)] 2021-10-25 09:34:47.135 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8064460, 8070951), (8072304, 8072368), (8072493, 8093058), (8074825, 8093058), (8077573, 8079369), (8079641, 8093058), (8093337, 8098345), (8096872, 8098345), (8096876, 8096970), (8097172, 8098345), (8098725, 8099145), (8099536, 8102892), (8101067, 8101687), (8102561, 8102892), (8104818, 8104879), (8105059, 8105126), (8105296, 8105439), (8105657, 8108285), (8105657, 8106015), (8106949, 8108638), (8106949, 8108285)] 2021-10-25 09:34:47.143 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8105439, 8106949, 'FBtr0304994_exon_6') contains intron (8105657, 8106015) 2021-10-25 09:34:47.143 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8096521, 8097172, 'FBtr0304995_exon_1') contains intron (8096876, 8096970) 2021-10-25 09:34:47.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304994_exon_6', 'FBtr0304995_exon_1'] 2021-10-25 09:34:47.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033573: ['FBtr0088199', 'FBtr0088200'] 2021-10-25 09:34:47.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004052: ['FBtr0075549'] 2021-10-25 09:34:47.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004052 has a single transcript. 2021-10-25 09:34:47.167 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4267205, 4267260)] 2021-10-25 09:34:47.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004053: ['FBtr0081670'] 2021-10-25 09:34:47.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004053 has a single transcript. 2021-10-25 09:34:47.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004054: ['FBtr0081671', 'FBtr0290296'] 2021-10-25 09:34:47.201 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10909976, 10910041), (10909976, 10910056)] 2021-10-25 09:34:47.202 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041605: ['FBtr0100499', 'FBtr0100500', 'FBtr0078898', 'FBtr0078900', 'FBtr0078901', 'FBtr0078902', 'FBtr0078897', 'FBtr0078899', 'FBtr0113337', 'FBtr0113338', 'FBtr0113340', 'FBtr0113341', 'FBtr0300789', 'FBtr0301768', 'FBtr0301769', 'FBtr0301770', 'FBtr0301771', 'FBtr0301772', 'FBtr0310506', 'FBtr0310614', 'FBtr0336482'] 2021-10-25 09:34:47.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029898: ['FBtr0070960', 'FBtr0302356', 'FBtr0302357'] 2021-10-25 09:34:47.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037229: ['FBtr0113191'] 2021-10-25 09:34:47.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037229 has a single transcript. 2021-10-25 09:34:47.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6743947, 6744014)] 2021-10-25 09:34:47.230 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6743134, 6744074, 'FBtr0290296_exon_1') contains intron (6743947, 6744014) 2021-10-25 09:34:47.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290296_exon_1'] 2021-10-25 09:34:47.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037230: ['FBtr0078959'] 2021-10-25 09:34:47.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037230 has a single transcript. 2021-10-25 09:34:47.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037231: ['FBtr0078958', 'FBtr0347550'] 2021-10-25 09:34:47.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033574: ['FBtr0088211', 'FBtr0300862', 'FBtr0345584'] 2021-10-25 09:34:47.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6747708, 6747840), (6747708, 6753761), (6748040, 6753761), (6755111, 6755171)] 2021-10-25 09:34:47.279 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6747543, 6748040, 'FBtr0302356_exon_1') contains intron (6747708, 6747840) 2021-10-25 09:34:47.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302356_exon_1'] 2021-10-25 09:34:47.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004055: ['FBtr0072397', 'FBtr0345678'] 2021-10-25 09:34:47.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4310358, 4310413), (4310654, 4310786)] 2021-10-25 09:34:47.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.328 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10940438, 10940506), (10940651, 10940709), (10941614, 10941688)] 2021-10-25 09:34:47.329 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25012177, 25012632), (25012706, 25027702), (25028484, 25028541), (25028891, 25028945)] 2021-10-25 09:34:47.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.335 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037232: ['FBtr0273009', 'FBtr0347365'] 2021-10-25 09:34:47.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029899: ['FBtr0070961', 'FBtr0070962', 'FBtr0339464'] 2021-10-25 09:34:47.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004057: ['FBtr0074748', 'FBtr0074749', 'FBtr0340611'] 2021-10-25 09:34:47.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4311974, 4312029), (4312533, 4312596), (4312906, 4312960), (4313095, 4313157), (4313787, 4313841)] 2021-10-25 09:34:47.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033578: ['FBtr0088202', 'FBtr0339487'] 2021-10-25 09:34:47.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6756700, 6759987), (6759894, 6759990), (6759894, 6759987), (6760210, 6760276), (6760346, 6760413), (6767122, 6767183), (6768338, 6768406), (6769053, 6769127)] 2021-10-25 09:34:47.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19667620, 19670483), (19670067, 19670483), (19670413, 19670483), (19670743, 19670805), (19671023, 19671108)] 2021-10-25 09:34:47.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262580: ['FBtr0304959'] 2021-10-25 09:34:47.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262580 has a single transcript. 2021-10-25 09:34:47.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262581: ['FBtr0304960'] 2021-10-25 09:34:47.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262581 has a single transcript. 2021-10-25 09:34:47.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037234: ['FBtr0078907', 'FBtr0100617', 'FBtr0336483', 'FBtr0336484'] 2021-10-25 09:34:47.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085447: ['FBtr0112708', 'FBtr0112709', 'FBtr0112710', 'FBtr0112712', 'FBtr0330122', 'FBtr0330123', 'FBtr0330124', 'FBtr0330125', 'FBtr0330126', 'FBtr0340654', 'FBtr0340655', 'FBtr0340656', 'FBtr0346962'] 2021-10-25 09:34:47.487 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11136006, 11136079), (11136219, 11136303), (11136416, 11136821), (11137112, 11137176), (11137333, 11137414), (11137537, 11137600), (11137685, 11138411), (11137685, 11138709), (11138498, 11138709), (11138921, 11139087)] 2021-10-25 09:34:47.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262582: ['FBtr0305026', 'FBtr0305027', 'FBtr0305028', 'FBtr0305029', 'FBtr0334305', 'FBtr0334306'] 2021-10-25 09:34:47.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033579: ['FBtr0088206', 'FBtr0330602', 'FBtr0330603'] 2021-10-25 09:34:47.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004066: ['FBtr0074210'] 2021-10-25 09:34:47.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004066 has a single transcript. 2021-10-25 09:34:47.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004087: ['FBtr0083295', 'FBtr0110910'] 2021-10-25 09:34:47.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4319856, 4321844), (4319890, 4321844), (4322047, 4323230), (4322047, 4322347), (4322495, 4323230), (4323622, 4323686), (4323889, 4323952), (4324164, 4324336), (4324510, 4324587), (4324672, 4324729), (4324811, 4324872), (4325461, 4325696), (4325489, 4325696)] 2021-10-25 09:34:47.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029903: ['FBtr0070968', 'FBtr0070964', 'FBtr0070965', 'FBtr0070966', 'FBtr0070967', 'FBtr0112956', 'FBtr0308228'] 2021-10-25 09:34:47.570 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4324872, 4325703, 'FBtr0336484_exon_9') contains intron (4325461, 4325696) 2021-10-25 09:34:47.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336484_exon_9'] 2021-10-25 09:34:47.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11140351, 11140530), (11140713, 11140799), (11140994, 11141209), (11141336, 11141678), (11141850, 11142683), (11142978, 11159763), (11142978, 11143569), (11159852, 11171954), (11159852, 11160150), (11160298, 11171954)] 2021-10-25 09:34:47.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16481340, 16481390)] 2021-10-25 09:34:47.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20252916, 20253626), (20253853, 20287948), (20289160, 20289228), (20289369, 20289485), (20290195, 20290358), (20290195, 20290370), (20290583, 20290961), (20291086, 20293601), (20293091, 20293601), (20293503, 20293601), (20294393, 20294553), (20295848, 20295908), (20296125, 20296199), (20296499, 20297096), (20296499, 20298383), (20298532, 20298595), (20299010, 20299080), (20299408, 20299464), (20299408, 20299467), (20299631, 20299700), (20299793, 20299952), (20299793, 20299967), (20300152, 20300216), (20300412, 20300607), (20300412, 20300634)] 2021-10-25 09:34:47.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20252769, 20253853, 'FBtr0334305_exon_1') contains intron (20252916, 20253626) 2021-10-25 09:34:47.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334305_exon_1'] 2021-10-25 09:34:47.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4280356, 4282673), (4280430, 4282673), (4280469, 4282673), (4280822, 4282673), (4281871, 4282673), (4281915, 4282673), (4281930, 4282673), (4282003, 4282673), (4282314, 4282673), (4282482, 4282673), (4282834, 4284225), (4284406, 4295119), (4284406, 4295128), (4284406, 4288071), (4288083, 4295119), (4288083, 4295128), (4292072, 4295119), (4292072, 4295128), (4292269, 4295119), (4294944, 4295119), (4295286, 4295567), (4295700, 4302525), (4295700, 4297487), (4298585, 4299789), (4298585, 4302525)] 2021-10-25 09:34:47.664 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4297487, 4301541, 'FBtr0301768_exon_7') contains intron (4298585, 4299789) 2021-10-25 09:34:47.664 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4297487, 4304604, 'FBtr0301771_exon_6') contains intron (4298585, 4299789) 2021-10-25 09:34:47.665 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4295567, 4304604, 'FBtr0336482_exon_5') contains intron (4295700, 4302525) 2021-10-25 09:34:47.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301768_exon_7', 'FBtr0301771_exon_6', 'FBtr0336482_exon_5'] 2021-10-25 09:34:47.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004101: ['FBtr0072271', 'FBtr0290089', 'FBtr0343314'] 2021-10-25 09:34:47.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033580: ['FBtr0088203'] 2021-10-25 09:34:47.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033580 has a single transcript. 2021-10-25 09:34:47.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037235: ['FBtr0078909', 'FBtr0111220'] 2021-10-25 09:34:47.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033581: ['FBtr0088205'] 2021-10-25 09:34:47.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033581 has a single transcript. 2021-10-25 09:34:47.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033582: ['FBtr0088197', 'FBtr0339485', 'FBtr0339486', 'FBtr0330635'] 2021-10-25 09:34:47.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6803766, 6805677), (6804177, 6805677), (6805006, 6805677), (6805249, 6805677), (6805475, 6805677), (6806218, 6806617), (6806804, 6806880), (6807437, 6807495), (6807648, 6808811), (6807648, 6807798), (6808341, 6808811), (6808995, 6809063), (6809137, 6809484), (6809137, 6809373), (6809406, 6809484), (6809657, 6809726), (6810638, 6810701), (6811047, 6811116), (6811252, 6811316), (6811417, 6811479)] 2021-10-25 09:34:47.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.739 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24344674, 24348211), (24348460, 24375414), (24375766, 24375826)] 2021-10-25 09:34:47.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.760 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4337923, 4338000), (4338303, 4339043)] 2021-10-25 09:34:47.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5658290, 5658342), (5658290, 5659428), (5658547, 5659428), (5659681, 5667821), (5664391, 5665176), (5666036, 5667821), (5667034, 5667821), (5667942, 5668005), (5668141, 5668690), (5668141, 5668699), (5668884, 5668963), (5669082, 5672054), (5669082, 5673066), (5669082, 5673093), (5673265, 5673546), (5673702, 5673771), (5674076, 5674374), (5674721, 5674789), (5675208, 5676276), (5675208, 5676006), (5676063, 5676276), (5676445, 5676510), (5676759, 5676818), (5676948, 5703924), (5679187, 5703924), (5691783, 5695421), (5699024, 5703924), (5704070, 5704961), (5705241, 5706441), (5706573, 5716096), (5716279, 5717537), (5717738, 5720876), (5721104, 5722381), (5722568, 5726479), (5726594, 5728490), (5728642, 5731439), (5731636, 5734438), (5731636, 5734465), (5734609, 5735725), (5735920, 5735985), (5736094, 5737983), (5738163, 5738225), (5738363, 5738415), (5738573, 5738638), (5739016, 5739105), (5739334, 5739443), (5739334, 5739464), (5739726, 5740103), (5740207, 5746467)] 2021-10-25 09:34:47.796 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11217480, 11217546), (11217690, 11217753), (11218145, 11218205), (11218163, 11218205), (11218382, 11219609), (11218382, 11219082), (11218382, 11218766)] 2021-10-25 09:34:47.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037236: ['FBtr0078953', 'FBtr0344740'] 2021-10-25 09:34:47.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004102: ['FBtr0300106', 'FBtr0331737', 'FBtr0331738', 'FBtr0331305', 'FBtr0331306'] 2021-10-25 09:34:47.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262583: ['FBtr0305124'] 2021-10-25 09:34:47.866 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262583 has a single transcript. 2021-10-25 09:34:47.873 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4335729, 4335785), (4335945, 4336008), (4336408, 4336468), (4337342, 4337547)] 2021-10-25 09:34:47.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262587: ['FBtr0305116'] 2021-10-25 09:34:47.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262587 has a single transcript. 2021-10-25 09:34:47.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262588: ['FBtr0305117'] 2021-10-25 09:34:47.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262588 has a single transcript. 2021-10-25 09:34:47.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262592: ['FBtr0305199', 'FBtr0305200'] 2021-10-25 09:34:47.933 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10624939, 10625000), (10625151, 10625216), (10625151, 10625205), (10625335, 10625394)] 2021-10-25 09:34:47.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.934 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037238: ['FBtr0332449', 'FBtr0335201', 'FBtr0335202', 'FBtr0335203'] 2021-10-25 09:34:47.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8633962, 8640359), (8640514, 8642465), (8640514, 8642474), (8640532, 8642465), (8642867, 8650374), (8642867, 8650093), (8642867, 8643102)] 2021-10-25 09:34:47.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:47.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:47.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033584: ['FBtr0088105', 'FBtr0339479'] 2021-10-25 09:34:48.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262593: ['FBtr0305201', 'FBtr0305202', 'FBtr0305203', 'FBtr0305205', 'FBtr0305206', 'FBtr0305207', 'FBtr0305208', 'FBtr0305209', 'FBtr0333898', 'FBtr0333899'] 2021-10-25 09:34:48.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029905: ['FBtr0070974'] 2021-10-25 09:34:48.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029905 has a single transcript. 2021-10-25 09:34:48.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029906: ['FBtr0070970'] 2021-10-25 09:34:48.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029906 has a single transcript. 2021-10-25 09:34:48.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11223010, 11224569), (11223683, 11224569)] 2021-10-25 09:34:48.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029907: ['FBtr0299814'] 2021-10-25 09:34:48.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029907 has a single transcript. 2021-10-25 09:34:48.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4359967, 4363277), (4360287, 4363277), (4360500, 4363277), (4363508, 4363561), (4363796, 4364216), (4364506, 4364565), (4365541, 4365701), (4365890, 4365948)] 2021-10-25 09:34:48.030 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4363561, 4364506, 'FBtr0332449_exon_3') contains intron (4363796, 4364216) 2021-10-25 09:34:48.031 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4364565, 4365890, 'FBtr0332449_exon_4') contains intron (4365541, 4365701) 2021-10-25 09:34:48.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332449_exon_3', 'FBtr0332449_exon_4'] 2021-10-25 09:34:48.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029909: ['FBtr0070973'] 2021-10-25 09:34:48.035 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029909 has a single transcript. 2021-10-25 09:34:48.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029911: ['FBtr0071042', 'FBtr0343323'] 2021-10-25 09:34:48.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6840056, 6840113), (6840261, 6840363), (6840434, 6841468), (6841574, 6841652), (6841748, 6841826), (6841953, 6842521)] 2021-10-25 09:34:48.082 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033587: ['FBtr0088195'] 2021-10-25 09:34:48.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033587 has a single transcript. 2021-10-25 09:34:48.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033588: ['FBtr0088106'] 2021-10-25 09:34:48.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033588 has a single transcript. 2021-10-25 09:34:48.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033589: ['FBtr0088107'] 2021-10-25 09:34:48.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033589 has a single transcript. 2021-10-25 09:34:48.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033590: ['FBtr0088194'] 2021-10-25 09:34:48.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033590 has a single transcript. 2021-10-25 09:34:48.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033591: ['FBtr0088193'] 2021-10-25 09:34:48.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033591 has a single transcript. 2021-10-25 09:34:48.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033592: ['FBtr0088192'] 2021-10-25 09:34:48.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033592 has a single transcript. 2021-10-25 09:34:48.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033593: ['FBtr0088191'] 2021-10-25 09:34:48.137 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033593 has a single transcript. 2021-10-25 09:34:48.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004103: ['FBtr0082595'] 2021-10-25 09:34:48.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004103 has a single transcript. 2021-10-25 09:34:48.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029912: ['FBtr0070994'] 2021-10-25 09:34:48.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029912 has a single transcript. 2021-10-25 09:34:48.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033594: ['FBtr0088108'] 2021-10-25 09:34:48.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033594 has a single transcript. 2021-10-25 09:34:48.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029913: ['FBtr0071041'] 2021-10-25 09:34:48.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029913 has a single transcript. 2021-10-25 09:34:48.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033597: ['FBtr0088190'] 2021-10-25 09:34:48.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033597 has a single transcript. 2021-10-25 09:34:48.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004106: ['FBtr0080051'] 2021-10-25 09:34:48.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004106 has a single transcript. 2021-10-25 09:34:48.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029914: ['FBtr0070995', 'FBtr0300177'] 2021-10-25 09:34:48.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033598: ['FBtr0088112'] 2021-10-25 09:34:48.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033598 has a single transcript. 2021-10-25 09:34:48.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033599: ['FBtr0088113'] 2021-10-25 09:34:48.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033599 has a single transcript. 2021-10-25 09:34:48.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004107: ['FBtr0083921', 'FBtr0083922', 'FBtr0300447'] 2021-10-25 09:34:48.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033600: ['FBtr0088189'] 2021-10-25 09:34:48.176 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033600 has a single transcript. 2021-10-25 09:34:48.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033601: ['FBtr0088188'] 2021-10-25 09:34:48.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033601 has a single transcript. 2021-10-25 09:34:48.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037239: ['FBtr0078913', 'FBtr0078914', 'FBtr0078915', 'FBtr0078916'] 2021-10-25 09:34:48.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033602: ['FBtr0088114'] 2021-10-25 09:34:48.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033602 has a single transcript. 2021-10-25 09:34:48.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033603: ['FBtr0302718', 'FBtr0302719'] 2021-10-25 09:34:48.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6851052, 6851299)] 2021-10-25 09:34:48.211 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6849769, 6851884, 'FBtr0070995_exon_1') contains intron (6851052, 6851299) 2021-10-25 09:34:48.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070995_exon_1'] 2021-10-25 09:34:48.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20735824, 20736090), (20736286, 20736340), (20736451, 20736510), (20736672, 20736731), (20736929, 20736984), (20737184, 20737259)] 2021-10-25 09:34:48.239 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20736984, 20737330, 'FBtr0083922_exon_6') contains intron (20737184, 20737259) 2021-10-25 09:34:48.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083922_exon_6'] 2021-10-25 09:34:48.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2895094, 2897243), (2895182, 2897243), (2895284, 2897243), (2896787, 2897243), (2897429, 2923555), (2923923, 2924074), (2923923, 2924077), (2925476, 2940780), (2941624, 2942565), (2941624, 2947876), (2941624, 2944022), (2941624, 2947801), (2942655, 2947876), (2948013, 2948478), (2948892, 2953011), (2948892, 2951993), (2952107, 2953011), (2952107, 2954684), (2952107, 2952652), (2952810, 2953011), (2955846, 2955911), (2956105, 2956165), (2956436, 2957330), (2956436, 2956820), (2956873, 2957330)] 2021-10-25 09:34:48.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11267301, 11267667), (11267712, 11267797), (11267863, 11267986), (11268019, 11268078), (11268135, 11268195), (11268135, 11268284), (11268228, 11268284), (11268341, 11268398), (11268539, 11268595), (11268652, 11268707), (11268740, 11268802), (11268907, 11268999), (11269065, 11269120), (11269153, 11269241), (11269280, 11269359), (11269485, 11269549), (11270270, 11272376)] 2021-10-25 09:34:48.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4378729, 4379449), (4379009, 4379449), (4379618, 4379674), (4379824, 4379927), (4380045, 4380108), (4380270, 4380503), (4380631, 4380702)] 2021-10-25 09:34:48.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029915: ['FBtr0071040', 'FBtr0343322', 'FBtr0345899'] 2021-10-25 09:34:48.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033605: ['FBtr0088182'] 2021-10-25 09:34:48.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033605 has a single transcript. 2021-10-25 09:34:48.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033607: ['FBtr0088181', 'FBtr0332422'] 2021-10-25 09:34:48.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6852942, 6864901), (6864981, 6866801)] 2021-10-25 09:34:48.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004108: ['FBtr0075322', 'FBtr0075323', 'FBtr0304018'] 2021-10-25 09:34:48.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11281150, 11281273), (11281379, 11281437), (11281632, 11281694), (11281890, 11281959), (11282099, 11282163), (11282268, 11282328), (11283323, 11283385), (11283605, 11283683), (11283850, 11283913)] 2021-10-25 09:34:48.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11280483, 11281379, 'FBtr0088181_exon_8') contains intron (11281150, 11281273) 2021-10-25 09:34:48.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11283683, 11283971, 'FBtr0088181_exon_1') contains intron (11283850, 11283913) 2021-10-25 09:34:48.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088181_exon_8', 'FBtr0088181_exon_1'] 2021-10-25 09:34:48.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037240: ['FBtr0078917'] 2021-10-25 09:34:48.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037240 has a single transcript. 2021-10-25 09:34:48.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16766540, 16773713), (16773642, 16773713), (16774366, 16774429)] 2021-10-25 09:34:48.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037241: ['FBtr0078919', 'FBtr0302339'] 2021-10-25 09:34:48.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033608: ['FBtr0088116', 'FBtr0332421'] 2021-10-25 09:34:48.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029920: ['FBtr0307391'] 2021-10-25 09:34:48.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029920 has a single transcript. 2021-10-25 09:34:48.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029922: ['FBtr0304108', 'FBtr0345906'] 2021-10-25 09:34:48.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085450: ['FBtr0112717', 'FBtr0112718', 'FBtr0112719', 'FBtr0343409'] 2021-10-25 09:34:48.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4391058, 4391110)] 2021-10-25 09:34:48.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:48.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.491 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6908821, 6917359), (6917934, 6962174), (6964245, 6964731)] 2021-10-25 09:34:48.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004110: ['FBtr0084086'] 2021-10-25 09:34:48.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004110 has a single transcript. 2021-10-25 09:34:48.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037242: ['FBtr0078950', 'FBtr0339552'] 2021-10-25 09:34:48.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004117: ['FBtr0083078', 'FBtr0083079', 'FBtr0083080', 'FBtr0333920', 'FBtr0339530', 'FBtr0345212'] 2021-10-25 09:34:48.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033609: ['FBtr0088178', 'FBtr0088179', 'FBtr0088180'] 2021-10-25 09:34:48.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029924: ['FBtr0071003'] 2021-10-25 09:34:48.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029924 has a single transcript. 2021-10-25 09:34:48.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7896754, 7975188), (7976685, 7984130), (7977024, 7984126)] 2021-10-25 09:34:48.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029925: ['FBtr0071038'] 2021-10-25 09:34:48.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029925 has a single transcript. 2021-10-25 09:34:48.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4396802, 4396859), (4397056, 4397111), (4397640, 4397707)] 2021-10-25 09:34:48.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029928: ['FBtr0071032', 'FBtr0345908'] 2021-10-25 09:34:48.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041621: ['FBtr0078977'] 2021-10-25 09:34:48.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041621 has a single transcript. 2021-10-25 09:34:48.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041622: ['FBtr0075901', 'FBtr0075902'] 2021-10-25 09:34:48.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11286168, 11286237), (11286372, 11286432), (11286665, 11286718), (11286886, 11286950), (11287091, 11287147), (11287317, 11287375), (11287586, 11287644), (11288560, 11289669), (11288560, 11289392), (11288560, 11289067)] 2021-10-25 09:34:48.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:48.615 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037244: ['FBtr0290222'] 2021-10-25 09:34:48.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037244 has a single transcript. 2021-10-25 09:34:48.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037248: ['FBtr0078946', 'FBtr0301244', 'FBtr0336458'] 2021-10-25 09:34:48.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12964410, 12964473), (12964629, 12966758), (12964629, 12964764)] 2021-10-25 09:34:48.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262594: ['FBtr0091804'] 2021-10-25 09:34:48.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262594 has a single transcript. 2021-10-25 09:34:48.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15310299, 15312399), (15311073, 15312399), (15312113, 15312399), (15312194, 15312399), (15313046, 15313108), (15313286, 15313590), (15313286, 15314527), (15314020, 15314527)] 2021-10-25 09:34:48.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262595: ['FBtr0091722'] 2021-10-25 09:34:48.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262595 has a single transcript. 2021-10-25 09:34:48.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262598: ['FBtr0301170', 'FBtr0301169'] 2021-10-25 09:34:48.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029929: ['FBtr0071009', 'FBtr0343331'] 2021-10-25 09:34:48.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041623: ['FBtr0077006'] 2021-10-25 09:34:48.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041623 has a single transcript. 2021-10-25 09:34:48.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085451: ['FBtr0310365', 'FBtr0310440'] 2021-10-25 09:34:48.708 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4423664, 4423727), (4423873, 4423932), (4425764, 4425830), (4426625, 4426722), (4426652, 4426722), (4426828, 4426881), (4427000, 4428974), (4427000, 4428549), (4428623, 4428974)] 2021-10-25 09:34:48.709 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041624: ['FBtr0077005'] 2021-10-25 09:34:48.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041624 has a single transcript. 2021-10-25 09:34:48.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041625: ['FBtr0077004'] 2021-10-25 09:34:48.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041625 has a single transcript. 2021-10-25 09:34:48.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033610: ['FBtr0088177'] 2021-10-25 09:34:48.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033610 has a single transcript. 2021-10-25 09:34:48.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:48.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8317354, 8317523), (8317354, 8317633), (8317550, 8317633), (8317780, 8317836), (8318959, 8319075), (8319310, 8319378)] 2021-10-25 09:34:48.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041626: ['FBtr0070029'] 2021-10-25 09:34:48.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041626 has a single transcript. 2021-10-25 09:34:48.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033614: ['FBtr0088171'] 2021-10-25 09:34:48.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033614 has a single transcript. 2021-10-25 09:34:48.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041627: ['FBtr0080763'] 2021-10-25 09:34:48.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041627 has a single transcript. 2021-10-25 09:34:48.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033615: ['FBtr0088118', 'FBtr0339481', 'FBtr0304676'] 2021-10-25 09:34:48.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041629: ['FBtr0071249'] 2021-10-25 09:34:48.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041629 has a single transcript. 2021-10-25 09:34:48.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18844037, 18844495), (18846359, 18849879), (18849157, 18849879), (18855051, 18855126), (18855354, 18855418)] 2021-10-25 09:34:48.747 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.747 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041630: ['FBtr0073235', 'FBtr0073237', 'FBtr0300774', 'FBtr0333567'] 2021-10-25 09:34:48.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262599: ['FBtr0305257', 'FBtr0305258', 'FBtr0332027'] 2021-10-25 09:34:48.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029930: ['FBtr0300760', 'FBtr0343324'] 2021-10-25 09:34:48.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085452: ['FBtr0112724', 'FBtr0301854'] 2021-10-25 09:34:48.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11302028, 11302096), (11302988, 11303049), (11303532, 11303595), (11303532, 11303600), (11303762, 11303819), (11304151, 11304207), (11304525, 11304583), (11304692, 11304750), (11305079, 11305137), (11305295, 11305350)] 2021-10-25 09:34:48.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7023094, 7031834), (7031931, 7032092), (7032286, 7033111), (7033309, 7033375), (7033432, 7065556)] 2021-10-25 09:34:48.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037249: ['FBtr0078944', 'FBtr0346646'] 2021-10-25 09:34:48.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10850259, 10851240), (10851687, 10853109), (10851687, 10852362), (10852885, 10853109), (10853439, 10853552), (10853779, 10853833)] 2021-10-25 09:34:48.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4288701, 4289049), (4288701, 4288907), (4289171, 4289245), (4289880, 4289960), (4291050, 4291112)] 2021-10-25 09:34:48.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23358767, 23358832), (23358971, 23359031)] 2021-10-25 09:34:48.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4289960, 4291211, 'FBtr0073237_exon_4') contains intron (4291050, 4291112) 2021-10-25 09:34:48.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23358738, 23358971, 'FBtr0112724_exon_1') contains intron (23358767, 23358832) 2021-10-25 09:34:48.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4289960, 4291211, 'FBtr0300774_exon_4') contains intron (4291050, 4291112) 2021-10-25 09:34:48.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112724_exon_1'] 2021-10-25 09:34:48.850 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4289960, 4291211, 'FBtr0333567_exon_3') contains intron (4291050, 4291112) 2021-10-25 09:34:48.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073237_exon_4', 'FBtr0300774_exon_4', 'FBtr0333567_exon_3'] 2021-10-25 09:34:48.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4430168, 4430227), (4432466, 4432516), (4433601, 4433698)] 2021-10-25 09:34:48.864 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004118: ['FBtr0084681', 'FBtr0084682'] 2021-10-25 09:34:48.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029931: ['FBtr0071010'] 2021-10-25 09:34:48.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029931 has a single transcript. 2021-10-25 09:34:48.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029932: ['FBtr0071013', 'FBtr0071014'] 2021-10-25 09:34:48.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085453: ['FBtr0343202', 'FBtr0112725'] 2021-10-25 09:34:48.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037250: ['FBtr0078925'] 2021-10-25 09:34:48.916 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037250 has a single transcript. 2021-10-25 09:34:48.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24509639, 24510140), (24510247, 24510901), (24510981, 24511072), (24511225, 24511483), (24511659, 24513694), (24513822, 24513879), (24514012, 24514066), (24514252, 24514309), (24514438, 24514493), (24514687, 24514912)] 2021-10-25 09:34:48.917 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24510901, 24511225, 'FBtr0084682_exon_7') contains intron (24510981, 24511072) 2021-10-25 09:34:48.918 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24511483, 24513822, 'FBtr0084682_exon_6') contains intron (24511659, 24513694) 2021-10-25 09:34:48.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084682_exon_7', 'FBtr0084682_exon_6'] 2021-10-25 09:34:48.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033616: ['FBtr0088119'] 2021-10-25 09:34:48.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033616 has a single transcript. 2021-10-25 09:34:48.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037251: ['FBtr0078943', 'FBtr0346735'] 2021-10-25 09:34:48.926 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7070223, 7070429), (7070933, 7071401)] 2021-10-25 09:34:48.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033623: ['FBtr0088157'] 2021-10-25 09:34:48.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033623 has a single transcript. 2021-10-25 09:34:48.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033624: ['FBtr0088155'] 2021-10-25 09:34:48.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033624 has a single transcript. 2021-10-25 09:34:48.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262601: ['FBtr0304118'] 2021-10-25 09:34:48.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262601 has a single transcript. 2021-10-25 09:34:48.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23359596, 23359669), (23359925, 23359989)] 2021-10-25 09:34:48.946 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033627: ['FBtr0088128', 'FBtr0088129'] 2021-10-25 09:34:48.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262604: ['FBtr0344597', 'FBtr0344598'] 2021-10-25 09:34:48.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:48.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:48.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:48.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004132: ['FBtr0088953'] 2021-10-25 09:34:48.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004132 has a single transcript. 2021-10-25 09:34:48.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029935: ['FBtr0071020'] 2021-10-25 09:34:48.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029935 has a single transcript. 2021-10-25 09:34:48.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004133: ['FBtr0088952', 'FBtr0310050', 'FBtr0300368'] 2021-10-25 09:34:48.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041702: ['FBtr0086600', 'FBtr0331978'] 2021-10-25 09:34:48.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029936: ['FBtr0071019', 'FBtr0331308'] 2021-10-25 09:34:49.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8819637, 8820777), (8820862, 8820918)] 2021-10-25 09:34:49.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.008 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11367101, 11368547), (11368400, 11368547), (11368698, 11368756)] 2021-10-25 09:34:49.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.009 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085454: ['FBtr0112726'] 2021-10-25 09:34:49.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085454 has a single transcript. 2021-10-25 09:34:49.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085455: ['FBtr0112727'] 2021-10-25 09:34:49.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085455 has a single transcript. 2021-10-25 09:34:49.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085456: ['FBtr0303231'] 2021-10-25 09:34:49.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085456 has a single transcript. 2021-10-25 09:34:49.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18971763, 18971828), (18971775, 18971828), (18972186, 18972244)] 2021-10-25 09:34:49.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037252: ['FBtr0078926'] 2021-10-25 09:34:49.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085457: ['FBtr0112729'] 2021-10-25 09:34:49.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037252 has a single transcript. 2021-10-25 09:34:49.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085457 has a single transcript. 2021-10-25 09:34:49.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7102709, 7102834), (7103729, 7103791), (7104304, 7104360)] 2021-10-25 09:34:49.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7102554, 7103729, 'FBtr0331308_exon_3') contains intron (7102709, 7102834) 2021-10-25 09:34:49.036 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331308_exon_3'] 2021-10-25 09:34:49.036 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085458: ['FBtr0112730'] 2021-10-25 09:34:49.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085458 has a single transcript. 2021-10-25 09:34:49.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037254: ['FBtr0299947'] 2021-10-25 09:34:49.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037254 has a single transcript. 2021-10-25 09:34:49.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085459: ['FBtr0112731'] 2021-10-25 09:34:49.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085459 has a single transcript. 2021-10-25 09:34:49.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037255: ['FBtr0078928'] 2021-10-25 09:34:49.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037255 has a single transcript. 2021-10-25 09:34:49.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085460: ['FBtr0112732'] 2021-10-25 09:34:49.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085460 has a single transcript. 2021-10-25 09:34:49.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037260: ['FBtr0303866'] 2021-10-25 09:34:49.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037260 has a single transcript. 2021-10-25 09:34:49.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7582354, 7582613), (7582928, 7585055), (7582928, 7584134), (7585357, 7586931)] 2021-10-25 09:34:49.060 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.060 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085461: ['FBtr0112733'] 2021-10-25 09:34:49.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085461 has a single transcript. 2021-10-25 09:34:49.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037261: ['FBtr0301297', 'FBtr0078894', 'FBtr0078895', 'FBtr0336457'] 2021-10-25 09:34:49.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262605: ['FBtr0305279'] 2021-10-25 09:34:49.075 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262605 has a single transcript. 2021-10-25 09:34:49.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033628: ['FBtr0304901', 'FBtr0304902'] 2021-10-25 09:34:49.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085462: ['FBtr0112734', 'FBtr0304711'] 2021-10-25 09:34:49.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262606: ['FBtr0347271'] 2021-10-25 09:34:49.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262606 has a single transcript. 2021-10-25 09:34:49.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262607: ['FBtr0305281'] 2021-10-25 09:34:49.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262607 has a single transcript. 2021-10-25 09:34:49.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029937: ['FBtr0071015'] 2021-10-25 09:34:49.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029937 has a single transcript. 2021-10-25 09:34:49.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041706: ['FBtr0072251', 'FBtr0305505'] 2021-10-25 09:34:49.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029939: ['FBtr0309030', 'FBtr0301240', 'FBtr0301241', 'FBtr0339815'] 2021-10-25 09:34:49.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262608: ['FBtr0307049', 'FBtr0305282'] 2021-10-25 09:34:49.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30650174, 30650237)] 2021-10-25 09:34:49.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30649960, 30650858, 'FBtr0112734_exon_1') contains intron (30650174, 30650237) 2021-10-25 09:34:49.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112734_exon_1'] 2021-10-25 09:34:49.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11374400, 11375307), (11375918, 11376228)] 2021-10-25 09:34:49.122 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24114803, 24114860), (24115846, 24115907), (24116061, 24116117)] 2021-10-25 09:34:49.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4247382, 4247448)] 2021-10-25 09:34:49.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.151 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4638409, 4638543), (4638839, 4639017), (4639557, 4639633), (4639752, 4640012), (4640336, 4641328), (4640336, 4641015), (4641572, 4641795)] 2021-10-25 09:34:49.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4638009, 4638839, 'FBtr0301297_exon_3') contains intron (4638409, 4638543) 2021-10-25 09:34:49.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4639017, 4640336, 'FBtr0301297_exon_2') contains intron (4639557, 4639633) 2021-10-25 09:34:49.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301297_exon_3', 'FBtr0301297_exon_2'] 2021-10-25 09:34:49.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033629: ['FBtr0088151'] 2021-10-25 09:34:49.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033629 has a single transcript. 2021-10-25 09:34:49.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004143: ['FBtr0299565'] 2021-10-25 09:34:49.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004143 has a single transcript. 2021-10-25 09:34:49.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085464: ['FBtr0112736'] 2021-10-25 09:34:49.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085464 has a single transcript. 2021-10-25 09:34:49.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085465: ['FBtr0112737'] 2021-10-25 09:34:49.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085465 has a single transcript. 2021-10-25 09:34:49.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033631: ['FBtr0089939', 'FBtr0089938', 'FBtr0110897', 'FBtr0339489', 'FBtr0433531'] 2021-10-25 09:34:49.196 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7137973, 7192986), (7193149, 7232363), (7193149, 7217765), (7197345, 7232363), (7217888, 7232363), (7226986, 7232363), (7232780, 7232911), (7233229, 7237050)] 2021-10-25 09:34:49.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085466: ['FBtr0112738'] 2021-10-25 09:34:49.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085466 has a single transcript. 2021-10-25 09:34:49.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041707: ['FBtr0078789', 'FBtr0301640'] 2021-10-25 09:34:49.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262609: ['FBtr0305283'] 2021-10-25 09:34:49.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262609 has a single transcript. 2021-10-25 09:34:49.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085468: ['FBtr0112740', 'FBtr0112741'] 2021-10-25 09:34:49.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004167: ['FBtr0073070', 'FBtr0073071', 'FBtr0073072', 'FBtr0303857', 'FBtr0300017', 'FBtr0332056', 'FBtr0332057'] 2021-10-25 09:34:49.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262610: ['FBtr0305284'] 2021-10-25 09:34:49.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262610 has a single transcript. 2021-10-25 09:34:49.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262611: ['FBtr0305285'] 2021-10-25 09:34:49.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262611 has a single transcript. 2021-10-25 09:34:49.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262612: ['FBtr0305286'] 2021-10-25 09:34:49.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262612 has a single transcript. 2021-10-25 09:34:49.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262613: ['FBtr0305290', 'FBtr0305291'] 2021-10-25 09:34:49.248 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5376950, 5377013), (5376950, 5376998)] 2021-10-25 09:34:49.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.258 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13158846, 13159016), (13159103, 13159533), (13159103, 13159730)] 2021-10-25 09:34:49.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27501725, 27501783)] 2021-10-25 09:34:49.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11380793, 11381572), (11381028, 11381572), (11381594, 11381662), (11381891, 11381954), (11382182, 11382248), (11382317, 11382931), (11382317, 11384014), (11383075, 11384014)] 2021-10-25 09:34:49.303 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11380448, 11381594, 'FBtr0433531_exon_5') contains intron (11380793, 11381572) 2021-10-25 09:34:49.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0433531_exon_5'] 2021-10-25 09:34:49.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041709: ['FBtr0072902'] 2021-10-25 09:34:49.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041709 has a single transcript. 2021-10-25 09:34:49.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041710: ['FBtr0082723', 'FBtr0331426', 'FBtr0331427'] 2021-10-25 09:34:49.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085470: ['FBtr0112744', 'FBtr0112745', 'FBtr0333420', 'FBtr0336886'] 2021-10-25 09:34:49.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037262: ['FBtr0078856', 'FBtr0078857', 'FBtr0336456', 'FBtr0305312', 'FBtr0345249'] 2021-10-25 09:34:49.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029940: ['FBtr0071046'] 2021-10-25 09:34:49.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029940 has a single transcript. 2021-10-25 09:34:49.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029941: ['FBtr0089712', 'FBtr0303415', 'FBtr0339819', 'FBtr0339820'] 2021-10-25 09:34:49.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262614: ['FBtr0305294', 'FBtr0305295', 'FBtr0310205', 'FBtr0305296', 'FBtr0305297', 'FBtr0305298', 'FBtr0305299', 'FBtr0305301', 'FBtr0305302', 'FBtr0305303', 'FBtr0305304'] 2021-10-25 09:34:49.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12991682, 12991743), (12992399, 12992465), (12992747, 12992982), (12992762, 12992982), (12992795, 12992982)] 2021-10-25 09:34:49.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3336967, 3337679), (3337001, 3337679), (3337828, 3351495), (3350336, 3351495), (3351686, 3351964), (3352132, 3353737), (3353854, 3353922), (3354185, 3354254), (3354384, 3354636), (3354824, 3354948), (3357922, 3357981), (3358121, 3358178), (3359789, 3359852), (3365751, 3365810), (3366126, 3366199), (3366310, 3367152), (3366310, 3367514), (3366310, 3366443), (3366773, 3367514), (3366962, 3367514), (3367010, 3367514), (3367215, 3367514)] 2021-10-25 09:34:49.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:49.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4642008, 4642568), (4642008, 4642288), (4642008, 4642283), (4642422, 4642568), (4642428, 4642568), (4642658, 4642750)] 2021-10-25 09:34:49.437 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4641962, 4642428, 'FBtr0078856_exon_1') contains intron (4642008, 4642288) 2021-10-25 09:34:49.437 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4641962, 4642422, 'FBtr0336456_exon_1') contains intron (4642008, 4642288) 2021-10-25 09:34:49.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7281746, 7281822), (7281749, 7281822), (7281960, 7282023), (7282176, 7282241), (7283868, 7283940), (7284758, 7358660), (7284758, 7285913), (7284758, 7284813), (7284758, 7285360), (7285784, 7285913), (7358687, 7405144)] 2021-10-25 09:34:49.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078856_exon_1', 'FBtr0336456_exon_1'] 2021-10-25 09:34:49.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041711: ['FBtr0082757'] 2021-10-25 09:34:49.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041711 has a single transcript. 2021-10-25 09:34:49.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033633: ['FBtr0088133'] 2021-10-25 09:34:49.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033633 has a single transcript. 2021-10-25 09:34:49.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041712: ['FBtr0072011'] 2021-10-25 09:34:49.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041712 has a single transcript. 2021-10-25 09:34:49.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033635: ['FBtr0088136', 'FBtr0088137', 'FBtr0305074', 'FBtr0339544'] 2021-10-25 09:34:49.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041713: ['FBtr0080699', 'FBtr0345641'] 2021-10-25 09:34:49.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15035796, 15036585), (15036991, 15037050)] 2021-10-25 09:34:49.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085471: ['FBtr0112746'] 2021-10-25 09:34:49.576 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085471 has a single transcript. 2021-10-25 09:34:49.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085472: ['FBtr0112747'] 2021-10-25 09:34:49.584 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085472 has a single transcript. 2021-10-25 09:34:49.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085473: ['FBtr0112748'] 2021-10-25 09:34:49.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085473 has a single transcript. 2021-10-25 09:34:49.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029942: ['FBtr0071047', 'FBtr0303414'] 2021-10-25 09:34:49.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085474: ['FBtr0112749'] 2021-10-25 09:34:49.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085474 has a single transcript. 2021-10-25 09:34:49.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8828318, 8828834), (8828318, 8832141), (8831005, 8832141), (8832274, 8832353), (8832645, 8832703), (8832645, 8833473), (8832944, 8833974), (8833611, 8833974), (8833738, 8833974), (8834074, 8834138), (8834287, 8834356), (8834949, 8838391), (8834949, 8835276), (8835510, 8838391), (8837710, 8838391), (8838989, 8839051), (8840614, 8842669), (8842839, 8862062), (8842839, 8844915), (8842839, 8864785), (8842839, 8857050), (8845150, 8846160), (8862993, 8864241), (8865299, 8865404), (8865299, 8867271), (8865299, 8881263), (8866025, 8867271), (8881339, 8930715)] 2021-10-25 09:34:49.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085475: ['FBtr0112750'] 2021-10-25 09:34:49.606 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8844915, 8846289, 'FBtr0305304_exon_1') contains intron (8845150, 8846160) 2021-10-25 09:34:49.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085475 has a single transcript. 2021-10-25 09:34:49.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305304_exon_1'] 2021-10-25 09:34:49.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037263: ['FBtr0301296'] 2021-10-25 09:34:49.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037263 has a single transcript. 2021-10-25 09:34:49.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11436422, 11439797), (11439868, 11439969), (11440125, 11440186), (11440330, 11441067), (11441490, 11441934), (11441490, 11441740), (11441490, 11441649), (11441620, 11441934), (11441872, 11441934)] 2021-10-25 09:34:49.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085476: ['FBtr0331203', 'FBtr0112751'] 2021-10-25 09:34:49.615 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037265: ['FBtr0078861', 'FBtr0308820'] 2021-10-25 09:34:49.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041717: ['FBtr0079659'] 2021-10-25 09:34:49.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041717 has a single transcript. 2021-10-25 09:34:49.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041719: ['FBtr0079108'] 2021-10-25 09:34:49.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041719 has a single transcript. 2021-10-25 09:34:49.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041720: ['FBtr0091789'] 2021-10-25 09:34:49.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041720 has a single transcript. 2021-10-25 09:34:49.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7286416, 7286765), (7287098, 7287171), (7287345, 7287410), (7287640, 7287708), (7287846, 7287910)] 2021-10-25 09:34:49.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041721: ['FBtr0075315'] 2021-10-25 09:34:49.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041721 has a single transcript. 2021-10-25 09:34:49.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041723: ['FBtr0089855'] 2021-10-25 09:34:49.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041723 has a single transcript. 2021-10-25 09:34:49.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2419498, 2419550), (2419665, 2419733)] 2021-10-25 09:34:49.659 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4655079, 4655517), (4655270, 4655517), (4656655, 4656902), (4657209, 4657580)] 2021-10-25 09:34:49.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041775: ['FBtr0075959', 'FBtr0332635', 'FBtr0332636', 'FBtr0332637', 'FBtr0332638', 'FBtr0332639', 'FBtr0332640', 'FBtr0332641', 'FBtr0332642'] 2021-10-25 09:34:49.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029943: ['FBtr0071065'] 2021-10-25 09:34:49.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029943 has a single transcript. 2021-10-25 09:34:49.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004168: ['FBtr0086577'] 2021-10-25 09:34:49.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004168 has a single transcript. 2021-10-25 09:34:49.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029944: ['FBtr0071049'] 2021-10-25 09:34:49.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029944 has a single transcript. 2021-10-25 09:34:49.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029945: ['FBtr0071051'] 2021-10-25 09:34:49.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029945 has a single transcript. 2021-10-25 09:34:49.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085477: ['FBtr0112752'] 2021-10-25 09:34:49.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085477 has a single transcript. 2021-10-25 09:34:49.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037270: ['FBtr0078892'] 2021-10-25 09:34:49.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037270 has a single transcript. 2021-10-25 09:34:49.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029946: ['FBtr0071064', 'FBtr0339816'] 2021-10-25 09:34:49.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037275: ['FBtr0078881'] 2021-10-25 09:34:49.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037275 has a single transcript. 2021-10-25 09:34:49.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004169: ['FBtr0073851', 'FBtr0073853', 'FBtr0073852', 'FBtr0100561', 'FBtr0100563', 'FBtr0301919', 'FBtr0301920', 'FBtr0301921', 'FBtr0301922', 'FBtr0301923', 'FBtr0340617', 'FBtr0340618', 'FBtr0310136', 'FBtr0310137', 'FBtr0310138', 'FBtr0345131', 'FBtr0308233', 'FBtr0308234'] 2021-10-25 09:34:49.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085478: ['FBtr0112753', 'FBtr0112754', 'FBtr0112755', 'FBtr0343028', 'FBtr0343029', 'FBtr0308591', 'FBtr0331304'] 2021-10-25 09:34:49.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037276: ['FBtr0078880'] 2021-10-25 09:34:49.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037276 has a single transcript. 2021-10-25 09:34:49.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037279: ['FBtr0078870', 'FBtr0078871', 'FBtr0345174', 'FBtr0345175'] 2021-10-25 09:34:49.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:49.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.774 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033636: ['FBtr0088091', 'FBtr0088094', 'FBtr0113066', 'FBtr0333070', 'FBtr0333071'] 2021-10-25 09:34:49.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029947: ['FBtr0071054'] 2021-10-25 09:34:49.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029947 has a single transcript. 2021-10-25 09:34:49.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4812226, 4813259), (4813379, 4813518), (4813608, 4813670), (4813976, 4814238), (4814773, 4815286)] 2021-10-25 09:34:49.834 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4813334, 4813608, 'FBtr0078870_exon_1') contains intron (4813379, 4813518) 2021-10-25 09:34:49.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4813259, 4813608, 'FBtr0345175_exon_2') contains intron (4813379, 4813518) 2021-10-25 09:34:49.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078870_exon_1', 'FBtr0345175_exon_2'] 2021-10-25 09:34:49.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029948: ['FBtr0071055'] 2021-10-25 09:34:49.836 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029948 has a single transcript. 2021-10-25 09:34:49.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029949: ['FBtr0071063'] 2021-10-25 09:34:49.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029949 has a single transcript. 2021-10-25 09:34:49.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029950: ['FBtr0071057', 'FBtr0345910'] 2021-10-25 09:34:49.860 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12515572, 12516558), (12517059, 12517415), (12517059, 12517427), (12517957, 12518023), (12518224, 12518437), (12518254, 12518437), (12518667, 12518729), (12518667, 12518732), (12519070, 12519143)] 2021-10-25 09:34:49.862 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9328286, 9328352), (9328594, 9332453), (9328594, 9330935), (9328594, 9333383), (9331478, 9332453), (9332699, 9333383), (9333622, 9336924), (9333622, 9336993), (9337237, 9337697), (9337892, 9338052), (9338225, 9338290), (9338433, 9338512), (9338448, 9338512), (9338631, 9354461), (9355178, 9356000), (9355178, 9355986), (9355178, 9356114)] 2021-10-25 09:34:49.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11579983, 11580048), (11580170, 11580234), (11580862, 11580948), (11581398, 11581627), (11581749, 11583014), (11582145, 11582615), (11582145, 11583014), (11587025, 11587096), (11587138, 11587537), (11587138, 11587645), (11587138, 11587770), (11587582, 11587645), (11587711, 11587770), (11588127, 11588362), (11588635, 11588697), (11589668, 11589842), (11589940, 11590002), (11590625, 11590686), (11591174, 11591684), (11591930, 11591992), (11592175, 11599375), (11592175, 11615578), (11592175, 11592958), (11599640, 11604768)] 2021-10-25 09:34:49.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11588697, 11589940, 'FBtr0088091_exon_6') contains intron (11589668, 11589842) 2021-10-25 09:34:49.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11580234, 11581398, 'FBtr0088094_exon_3') contains intron (11580862, 11580948) 2021-10-25 09:34:49.886 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11588697, 11589940, 'FBtr0113066_exon_6') contains intron (11589668, 11589842) 2021-10-25 09:34:49.887 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11588697, 11589940, 'FBtr0333071_exon_7') contains intron (11589668, 11589842) 2021-10-25 09:34:49.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088091_exon_6', 'FBtr0088094_exon_3', 'FBtr0113066_exon_6', 'FBtr0333071_exon_7'] 2021-10-25 09:34:49.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7418963, 7419773), (7419933, 7419991), (7420057, 7420119), (7421210, 7421272)] 2021-10-25 09:34:49.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:49.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:49.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029951: ['FBtr0071067'] 2021-10-25 09:34:49.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029951 has a single transcript. 2021-10-25 09:34:49.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029952: ['FBtr0071081'] 2021-10-25 09:34:49.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029952 has a single transcript. 2021-10-25 09:34:49.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029955: ['FBtr0071078', 'FBtr0300836'] 2021-10-25 09:34:49.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037280: ['FBtr0078872'] 2021-10-25 09:34:49.986 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037280 has a single transcript. 2021-10-25 09:34:49.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037282: ['FBtr0078875', 'FBtr0334900', 'FBtr0334901'] 2021-10-25 09:34:50.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7714491, 7714970), (7714491, 7717790)] 2021-10-25 09:34:50.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262616: ['FBtr0305347'] 2021-10-25 09:34:50.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262616 has a single transcript. 2021-10-25 09:34:50.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4819737, 4819793), (4819910, 4820058), (4819910, 4820332), (4820266, 4820332)] 2021-10-25 09:34:50.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029957: ['FBtr0071071'] 2021-10-25 09:34:50.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029957 has a single transcript. 2021-10-25 09:34:50.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033638: ['FBtr0088089', 'FBtr0300945', 'FBtr0306029'] 2021-10-25 09:34:50.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262617: ['FBtr0305351', 'FBtr0305352', 'FBtr0305353', 'FBtr0305354', 'FBtr0305355', 'FBtr0305356', 'FBtr0305357', 'FBtr0337049', 'FBtr0337050'] 2021-10-25 09:34:50.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029958: ['FBtr0071076', 'FBtr0307273'] 2021-10-25 09:34:50.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13594050, 13594829), (13594050, 13594284), (13594363, 13595003), (13594908, 13595003), (13595084, 13595149), (13595242, 13595319), (13595538, 13596375), (13595538, 13596378), (13596748, 13599415), (13596748, 13597380), (13596748, 13598173), (13596748, 13600069), (13597404, 13599415), (13597404, 13598173), (13597404, 13599411), (13598176, 13599415), (13599457, 13600069), (13599460, 13600069), (13600117, 13602228), (13600117, 13602417), (13600117, 13601367)] 2021-10-25 09:34:50.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.133 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7732245, 7732313), (7732881, 7732987), (7733489, 7734018)] 2021-10-25 09:34:50.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11621040, 11621115), (11621417, 11621616), (11622471, 11622530), (11623902, 11623963), (11624100, 11624160), (11625295, 11629390), (11629434, 11631940), (11629434, 11640145)] 2021-10-25 09:34:50.145 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037283: ['FBtr0078874'] 2021-10-25 09:34:50.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037283 has a single transcript. 2021-10-25 09:34:50.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085479: ['FBtr0112756'] 2021-10-25 09:34:50.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085479 has a single transcript. 2021-10-25 09:34:50.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037284: ['FBtr0078873'] 2021-10-25 09:34:50.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037284 has a single transcript. 2021-10-25 09:34:50.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085480: ['FBtr0112757', 'FBtr0308640', 'FBtr0345808'] 2021-10-25 09:34:50.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029959: ['FBtr0071072', 'FBtr0307272'] 2021-10-25 09:34:50.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037288: ['FBtr0078848', 'FBtr0305965'] 2021-10-25 09:34:50.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7735335, 7735763)] 2021-10-25 09:34:50.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4954278, 4954335), (4954430, 4955100), (4954430, 4955037)] 2021-10-25 09:34:50.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041780: ['FBtr0345060'] 2021-10-25 09:34:50.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0041780 has a single transcript. 2021-10-25 09:34:50.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15688911, 15688974), (15689259, 15689342), (15689448, 15689504), (15689448, 15691661), (15689813, 15691661)] 2021-10-25 09:34:50.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041781: ['FBtr0080148', 'FBtr0305255', 'FBtr0305256', 'FBtr0340223', 'FBtr0329949', 'FBtr0329950'] 2021-10-25 09:34:50.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033639: ['FBtr0088088', 'FBtr0113067', 'FBtr0113068', 'FBtr0113069', 'FBtr0330632', 'FBtr0330633', 'FBtr0330634'] 2021-10-25 09:34:50.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029961: ['FBtr0071075'] 2021-10-25 09:34:50.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029961 has a single transcript. 2021-10-25 09:34:50.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037290: ['FBtr0078841'] 2021-10-25 09:34:50.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037290 has a single transcript. 2021-10-25 09:34:50.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037291: ['FBtr0078846'] 2021-10-25 09:34:50.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037291 has a single transcript. 2021-10-25 09:34:50.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029962: ['FBtr0300019', 'FBtr0343348'] 2021-10-25 09:34:50.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10264878, 10291099), (10284712, 10291099), (10284879, 10291099), (10290720, 10291099), (10291452, 10291572), (10291772, 10291836), (10292054, 10292115), (10292713, 10293193), (10294318, 10296733), (10294318, 10295320), (10296061, 10296733), (10297109, 10297439), (10297697, 10297768), (10297897, 10298245), (10298375, 10298448), (10298591, 10299633), (10298591, 10299001), (10299058, 10299633), (10299752, 10301943), (10299752, 10303309), (10307366, 10307422)] 2021-10-25 09:34:50.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037292: ['FBtr0301312'] 2021-10-25 09:34:50.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037292 has a single transcript. 2021-10-25 09:34:50.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037293: ['FBtr0078842'] 2021-10-25 09:34:50.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037293 has a single transcript. 2021-10-25 09:34:50.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037294: ['FBtr0078773'] 2021-10-25 09:34:50.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037294 has a single transcript. 2021-10-25 09:34:50.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037295: ['FBtr0110950', 'FBtr0339315'] 2021-10-25 09:34:50.360 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7826834, 7835030), (7835078, 7836791), (7836928, 7837042), (7837234, 7837324), (7837487, 7838696), (7838851, 7839717), (7839849, 7840269)] 2021-10-25 09:34:50.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085481: ['FBtr0299517', 'FBtr0345809'] 2021-10-25 09:34:50.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5151286, 5153522), (5154097, 5165337), (5165834, 5166079), (5166431, 5166862), (5167089, 5167159), (5167265, 5169447)] 2021-10-25 09:34:50.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10976968, 10977897), (10977070, 10977897), (10978706, 10980444), (10978706, 10979632), (10978706, 10978879), (10978963, 10980444), (10978981, 10980444), (10978981, 10979632), (10979713, 10980444), (10981112, 10981178), (10981428, 10981486)] 2021-10-25 09:34:50.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15686583, 15686657), (15686954, 15687071), (15687168, 15687231)] 2021-10-25 09:34:50.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029963: ['FBtr0071150'] 2021-10-25 09:34:50.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029963 has a single transcript. 2021-10-25 09:34:50.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029964: ['FBtr0273372'] 2021-10-25 09:34:50.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029964 has a single transcript. 2021-10-25 09:34:50.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029965: ['FBtr0336957'] 2021-10-25 09:34:50.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029965 has a single transcript. 2021-10-25 09:34:50.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11643296, 11643359), (11643572, 11643632), (11643926, 11643990), (11644179, 11644238), (11644416, 11644484), (11644579, 11644680), (11644764, 11644847), (11644964, 11650814), (11644964, 11648345), (11644964, 11645409), (11651207, 11651323), (11651224, 11651323)] 2021-10-25 09:34:50.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037296: ['FBtr0078831'] 2021-10-25 09:34:50.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037296 has a single transcript. 2021-10-25 09:34:50.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029966: ['FBtr0071087', 'FBtr0309827'] 2021-10-25 09:34:50.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037297: ['FBtr0078774', 'FBtr0078775', 'FBtr0334907'] 2021-10-25 09:34:50.469 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330632': ['FBtr0330633']} 2021-10-25 09:34:50.469 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330633']] 2021-10-25 09:34:50.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085482: ['FBtr0299518'] 2021-10-25 09:34:50.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085482 has a single transcript. 2021-10-25 09:34:50.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7874526, 7874749), (7875680, 7875776)] 2021-10-25 09:34:50.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085483: ['FBtr0112760'] 2021-10-25 09:34:50.490 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7874393, 7875680, 'FBtr0309827_exon_1') contains intron (7874526, 7874749) 2021-10-25 09:34:50.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085483 has a single transcript. 2021-10-25 09:34:50.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309827_exon_1'] 2021-10-25 09:34:50.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085484: ['FBtr0112761'] 2021-10-25 09:34:50.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085484 has a single transcript. 2021-10-25 09:34:50.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085485: ['FBtr0112762'] 2021-10-25 09:34:50.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085485 has a single transcript. 2021-10-25 09:34:50.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5219855, 5219915), (5219855, 5219918), (5220133, 5220198), (5220470, 5220535), (5220685, 5220748), (5221325, 5221391)] 2021-10-25 09:34:50.527 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5219656, 5220133, 'FBtr0078774_exon_1') contains intron (5219855, 5219915) 2021-10-25 09:34:50.527 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5220748, 5221548, 'FBtr0334907_exon_5') contains intron (5221325, 5221391) 2021-10-25 09:34:50.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078774_exon_1', 'FBtr0334907_exon_5'] 2021-10-25 09:34:50.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085486: ['FBtr0112763', 'FBtr0345621'] 2021-10-25 09:34:50.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029968: ['FBtr0071088'] 2021-10-25 09:34:50.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029968 has a single transcript. 2021-10-25 09:34:50.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029969: ['FBtr0071143', 'FBtr0345982'] 2021-10-25 09:34:50.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16670580, 16670639), (16671155, 16671213), (16671318, 16671373)] 2021-10-25 09:34:50.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:50.615 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037298: ['FBtr0078828', 'FBtr0078829', 'FBtr0078830'] 2021-10-25 09:34:50.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085487: ['FBtr0112764'] 2021-10-25 09:34:50.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085487 has a single transcript. 2021-10-25 09:34:50.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085488: ['FBtr0112765', 'FBtr0345376', 'FBtr0345377'] 2021-10-25 09:34:50.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0041789: ['FBtr0081213', 'FBtr0081212', 'FBtr0081210', 'FBtr0081211', 'FBtr0081214', 'FBtr0100449', 'FBtr0306598', 'FBtr0334166', 'FBtr0334167'] 2021-10-25 09:34:50.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033640: ['FBtr0088072'] 2021-10-25 09:34:50.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033640 has a single transcript. 2021-10-25 09:34:50.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033644: ['FBtr0088075'] 2021-10-25 09:34:50.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033644 has a single transcript. 2021-10-25 09:34:50.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029970: ['FBtr0071142'] 2021-10-25 09:34:50.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029970 has a single transcript. 2021-10-25 09:34:50.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033645: ['FBtr0088084'] 2021-10-25 09:34:50.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033645 has a single transcript. 2021-10-25 09:34:50.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029971: ['FBtr0071140', 'FBtr0071141', 'FBtr0340163', 'FBtr0300899', 'FBtr0300900'] 2021-10-25 09:34:50.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262619: ['FBtr0072132'] 2021-10-25 09:34:50.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262619 has a single transcript. 2021-10-25 09:34:50.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5223146, 5223249), (5223188, 5223249)] 2021-10-25 09:34:50.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5221631, 5223267, 'FBtr0078830_exon_1') contains intron (5223146, 5223249) 2021-10-25 09:34:50.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078830_exon_1'] 2021-10-25 09:34:50.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033648: ['FBtr0088080'] 2021-10-25 09:34:50.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033648 has a single transcript. 2021-10-25 09:34:50.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262620: ['FBtr0342855', 'FBtr0342856', 'FBtr0342857'] 2021-10-25 09:34:50.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033649: ['FBtr0113070'] 2021-10-25 09:34:50.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033649 has a single transcript. 2021-10-25 09:34:50.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033650: ['FBtr0088029'] 2021-10-25 09:34:50.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033650 has a single transcript. 2021-10-25 09:34:50.731 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16824939, 16825577), (16825148, 16825577), (16825677, 16825735)] 2021-10-25 09:34:50.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033651: ['FBtr0088065'] 2021-10-25 09:34:50.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033651 has a single transcript. 2021-10-25 09:34:50.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033652: ['FBtr0088030', 'FBtr0304622'] 2021-10-25 09:34:50.783 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21657667, 21657832), (21657741, 21657832), (21657776, 21657832)] 2021-10-25 09:34:50.784 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.784 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037299: ['FBtr0078777', 'FBtr0305001', 'FBtr0305002'] 2021-10-25 09:34:50.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11759501, 11770536), (11770582, 11793227), (11790934, 11793227), (11793351, 11807944), (11808063, 11809900)] 2021-10-25 09:34:50.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7893416, 7893587), (7893416, 7893749), (7893490, 7893749), (7893490, 7893587)] 2021-10-25 09:34:50.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085489: ['FBtr0112766'] 2021-10-25 09:34:50.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085489 has a single transcript. 2021-10-25 09:34:50.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085491: ['FBtr0112768'] 2021-10-25 09:34:50.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085491 has a single transcript. 2021-10-25 09:34:50.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085494: ['FBtr0308947'] 2021-10-25 09:34:50.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085494 has a single transcript. 2021-10-25 09:34:50.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19401372, 19403998), (19403716, 19403998), (19404682, 19404749), (19404682, 19409403), (19409549, 19409611), (19409703, 19409768), (19409910, 19410247), (19410413, 19410479), (19410643, 19426205), (19410643, 19410844), (19410643, 19416413), (19410643, 19411536), (19410643, 19419868), (19411711, 19414411), (19411719, 19414411), (19420191, 19423414), (19420191, 19423278)] 2021-10-25 09:34:50.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033653: ['FBtr0088031'] 2021-10-25 09:34:50.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033653 has a single transcript. 2021-10-25 09:34:50.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085500: ['FBtr0347465'] 2021-10-25 09:34:50.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085500 has a single transcript. 2021-10-25 09:34:50.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5226978, 5227372), (5226978, 5227323), (5226995, 5227323)] 2021-10-25 09:34:50.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033654: ['FBtr0088064', 'FBtr0345677'] 2021-10-25 09:34:50.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085505: ['FBtr0302349'] 2021-10-25 09:34:50.866 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085505 has a single transcript. 2021-10-25 09:34:50.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085506: ['FBtr0302344'] 2021-10-25 09:34:50.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085506 has a single transcript. 2021-10-25 09:34:50.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262621: ['FBtr0305483'] 2021-10-25 09:34:50.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262621 has a single transcript. 2021-10-25 09:34:50.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085511: ['FBtr0304147'] 2021-10-25 09:34:50.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085511 has a single transcript. 2021-10-25 09:34:50.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262622: ['FBtr0344571', 'FBtr0344572'] 2021-10-25 09:34:50.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085512: ['FBtr0310523'] 2021-10-25 09:34:50.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085512 has a single transcript. 2021-10-25 09:34:50.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085520: ['FBtr0347466'] 2021-10-25 09:34:50.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085520 has a single transcript. 2021-10-25 09:34:50.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11829107, 11829967), (11830436, 11837895), (11838038, 11839271)] 2021-10-25 09:34:50.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004170: ['FBtr0070073'] 2021-10-25 09:34:50.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004170 has a single transcript. 2021-10-25 09:34:50.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085521: ['FBtr0346695'] 2021-10-25 09:34:50.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085521 has a single transcript. 2021-10-25 09:34:50.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004171: ['FBtr0085278'] 2021-10-25 09:34:50.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004171 has a single transcript. 2021-10-25 09:34:50.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085523: ['FBtr0302336'] 2021-10-25 09:34:50.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085523 has a single transcript. 2021-10-25 09:34:50.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13282854, 13282912), (13282854, 13282915)] 2021-10-25 09:34:50.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:50.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:50.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085540: ['FBtr0302352'] 2021-10-25 09:34:50.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085540 has a single transcript. 2021-10-25 09:34:50.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004172: ['FBtr0081584'] 2021-10-25 09:34:50.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004172 has a single transcript. 2021-10-25 09:34:50.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004173: ['FBtr0081586'] 2021-10-25 09:34:50.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085569: ['FBtr0301782'] 2021-10-25 09:34:50.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004173 has a single transcript. 2021-10-25 09:34:50.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085569 has a single transcript. 2021-10-25 09:34:50.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037301: ['FBtr0078778'] 2021-10-25 09:34:50.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037301 has a single transcript. 2021-10-25 09:34:50.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085570: ['FBtr0302915'] 2021-10-25 09:34:50.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085570 has a single transcript. 2021-10-25 09:34:50.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004174: ['FBtr0081587', 'FBtr0112841'] 2021-10-25 09:34:50.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037304: ['FBtr0078779', 'FBtr0332428'] 2021-10-25 09:34:50.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033656: ['FBtr0088063'] 2021-10-25 09:34:50.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033656 has a single transcript. 2021-10-25 09:34:50.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085582: ['FBtr0344616'] 2021-10-25 09:34:50.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085582 has a single transcript. 2021-10-25 09:34:50.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085599: ['FBtr0343638'] 2021-10-25 09:34:50.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085599 has a single transcript. 2021-10-25 09:34:50.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033657: ['FBtr0088032'] 2021-10-25 09:34:50.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033657 has a single transcript. 2021-10-25 09:34:50.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085612: ['FBtr0347357'] 2021-10-25 09:34:50.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085612 has a single transcript. 2021-10-25 09:34:50.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033658: ['FBtr0088062'] 2021-10-25 09:34:50.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033658 has a single transcript. 2021-10-25 09:34:50.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262623: ['FBtr0305487', 'FBtr0344808'] 2021-10-25 09:34:50.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085638: ['FBtr0301790', 'FBtr0301791', 'FBtr0301792', 'FBtr0334937'] 2021-10-25 09:34:50.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033659: ['FBtr0088061', 'FBtr0347012'] 2021-10-25 09:34:50.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029974: ['FBtr0071134', 'FBtr0307270'] 2021-10-25 09:34:50.999 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5253375, 5253433), (5253669, 5253874), (5254919, 5254973)] 2021-10-25 09:34:51.000 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5253347, 5253669, 'FBtr0078779_exon_1') contains intron (5253375, 5253433) 2021-10-25 09:34:51.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078779_exon_1'] 2021-10-25 09:34:51.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7364545, 7364606), (7364545, 7364602)] 2021-10-25 09:34:51.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.038 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13299929, 13299985), (13299929, 13299981)] 2021-10-25 09:34:51.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11865421, 11865499), (11865905, 11865955), (11866163, 11866213), (11866255, 11866321)] 2021-10-25 09:34:51.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7905994, 7906044), (7906181, 7906248), (7906426, 7906499), (7906946, 7907256), (7907696, 7907921), (7908034, 7908098)] 2021-10-25 09:34:51.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037305: ['FBtr0078821'] 2021-10-25 09:34:51.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037305 has a single transcript. 2021-10-25 09:34:51.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037307: ['FBtr0078820'] 2021-10-25 09:34:51.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037307 has a single transcript. 2021-10-25 09:34:51.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004175: ['FBtr0081588'] 2021-10-25 09:34:51.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004175 has a single transcript. 2021-10-25 09:34:51.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037310: ['FBtr0078784'] 2021-10-25 09:34:51.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037310 has a single transcript. 2021-10-25 09:34:51.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037312: ['FBtr0078807'] 2021-10-25 09:34:51.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037312 has a single transcript. 2021-10-25 09:34:51.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004177: ['FBtr0079525', 'FBtr0343416', 'FBtr0343417'] 2021-10-25 09:34:51.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2770710, 2830707), (2830781, 2830865), (2831043, 2846507), (2831043, 2846603), (2831043, 2846670)] 2021-10-25 09:34:51.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2830707, 2831043, 'FBtr0301790_exon_2') contains intron (2830781, 2830865) 2021-10-25 09:34:51.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2830707, 2831043, 'FBtr0301791_exon_2') contains intron (2830781, 2830865) 2021-10-25 09:34:51.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2830707, 2831043, 'FBtr0301792_exon_2') contains intron (2830781, 2830865) 2021-10-25 09:34:51.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301790_exon_2', 'FBtr0301791_exon_2', 'FBtr0301792_exon_2'] 2021-10-25 09:34:51.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037313: ['FBtr0078785', 'FBtr0335000'] 2021-10-25 09:34:51.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029975: ['FBtr0071091'] 2021-10-25 09:34:51.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029975 has a single transcript. 2021-10-25 09:34:51.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033661: ['FBtr0310323'] 2021-10-25 09:34:51.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033661 has a single transcript. 2021-10-25 09:34:51.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262624: ['FBtr0072836', 'FBtr0072837'] 2021-10-25 09:34:51.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033663: ['FBtr0088058'] 2021-10-25 09:34:51.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033663 has a single transcript. 2021-10-25 09:34:51.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029976: ['FBtr0071092', 'FBtr0340148'] 2021-10-25 09:34:51.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033665: ['FBtr0088038'] 2021-10-25 09:34:51.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033665 has a single transcript. 2021-10-25 09:34:51.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033667: ['FBtr0088054'] 2021-10-25 09:34:51.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033667 has a single transcript. 2021-10-25 09:34:51.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033668: ['FBtr0088039', 'FBtr0088040'] 2021-10-25 09:34:51.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5355253, 5355326), (5355550, 5355833), (5355942, 5356002), (5356128, 5356424)] 2021-10-25 09:34:51.136 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5356002, 5356748, 'FBtr0335000_exon_4') contains intron (5356128, 5356424) 2021-10-25 09:34:51.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335000_exon_4'] 2021-10-25 09:34:51.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1885846, 1889773), (1889723, 1889777), (1889948, 1890018), (1890152, 1890321), (1890448, 1890614), (1890857, 1890918)] 2021-10-25 09:34:51.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7828153, 7830461), (7831025, 7831468), (7831659, 7831733)] 2021-10-25 09:34:51.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7912979, 7913050), (7913190, 7913327), (7913424, 7913488), (7913800, 7914262), (7914435, 7914491), (7914898, 7914959), (7915697, 7915766), (7915946, 7916007), (7916145, 7916210), (7916894, 7916954)] 2021-10-25 09:34:51.148 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11940234, 11950044), (11950189, 11955584), (11955742, 11961682), (11961755, 11962102), (11962270, 11962376), (11962575, 11962673), (11962981, 11964001), (11964086, 11964231), (11964555, 11966731), (11966245, 11966731)] 2021-10-25 09:34:51.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037315: ['FBtr0078803', 'FBtr0078804'] 2021-10-25 09:34:51.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042083: ['FBtr0086126'] 2021-10-25 09:34:51.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042083 has a single transcript. 2021-10-25 09:34:51.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262631: ['FBtr0309039', 'FBtr0305496'] 2021-10-25 09:34:51.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042085: ['FBtr0086107'] 2021-10-25 09:34:51.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042085 has a single transcript. 2021-10-25 09:34:51.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029977: ['FBtr0071133'] 2021-10-25 09:34:51.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029977 has a single transcript. 2021-10-25 09:34:51.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042086: ['FBtr0086177'] 2021-10-25 09:34:51.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042086 has a single transcript. 2021-10-25 09:34:51.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029979: ['FBtr0071132', 'FBtr0344137'] 2021-10-25 09:34:51.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042092: ['FBtr0079372'] 2021-10-25 09:34:51.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042092 has a single transcript. 2021-10-25 09:34:51.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085644: ['FBtr0347421'] 2021-10-25 09:34:51.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085644 has a single transcript. 2021-10-25 09:34:51.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042094: ['FBtr0082330', 'FBtr0082331', 'FBtr0339378', 'FBtr0339379'] 2021-10-25 09:34:51.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085664: ['FBtr0304148'] 2021-10-25 09:34:51.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085664 has a single transcript. 2021-10-25 09:34:51.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:51.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5359287, 5359347), (5359550, 5359978), (5361760, 5362031), (5361760, 5367920)] 2021-10-25 09:34:51.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085673: ['FBtr0302348'] 2021-10-25 09:34:51.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085673 has a single transcript. 2021-10-25 09:34:51.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033669: ['FBtr0088051', 'FBtr0088052', 'FBtr0088053', 'FBtr0310157', 'FBtr0310159'] 2021-10-25 09:34:51.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004179: ['FBtr0078493', 'FBtr0078494', 'FBtr0078495', 'FBtr0344983', 'FBtr0334746', 'FBtr0334747'] 2021-10-25 09:34:51.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085692: ['FBtr0347010'] 2021-10-25 09:34:51.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085692 has a single transcript. 2021-10-25 09:34:51.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085693: ['FBtr0114142'] 2021-10-25 09:34:51.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085693 has a single transcript. 2021-10-25 09:34:51.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7926699, 7926764), (7928556, 7928793), (7930315, 7930873)] 2021-10-25 09:34:51.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085732: ['FBtr0302397', 'FBtr0334739', 'FBtr0334740'] 2021-10-25 09:34:51.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037317: ['FBtr0100433'] 2021-10-25 09:34:51.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037317 has a single transcript. 2021-10-25 09:34:51.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037320: ['FBtr0078801'] 2021-10-25 09:34:51.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037320 has a single transcript. 2021-10-25 09:34:51.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262636: ['FBtr0307043', 'FBtr0307044', 'FBtr0089129', 'FBtr0089128'] 2021-10-25 09:34:51.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037322: ['FBtr0078797'] 2021-10-25 09:34:51.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037322 has a single transcript. 2021-10-25 09:34:51.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10888343, 10889072), (10888343, 10889065)] 2021-10-25 09:34:51.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029980: ['FBtr0071131', 'FBtr0331433'] 2021-10-25 09:34:51.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037323: ['FBtr0078795', 'FBtr0344832'] 2021-10-25 09:34:51.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1211267, 1212215), (1211639, 1212215), (1211910, 1212215), (1212491, 1212555), (1212744, 1212835)] 2021-10-25 09:34:51.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5401443, 5401506), (5401811, 5404003), (5401811, 5403515), (5403873, 5404003)] 2021-10-25 09:34:51.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7932294, 7932536), (7933208, 7933322)] 2021-10-25 09:34:51.363 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7932536, 7933332, 'FBtr0071131_exon_1') contains intron (7933208, 7933322) 2021-10-25 09:34:51.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071131_exon_1'] 2021-10-25 09:34:51.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11967779, 11967836), (11968231, 11968283), (11968479, 11970025), (11968479, 11968739), (11968479, 11968546), (11968512, 11968739)] 2021-10-25 09:34:51.364 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11968283, 11968654, 'FBtr0088053_exon_1') contains intron (11968479, 11968546) 2021-10-25 09:34:51.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088053_exon_1'] 2021-10-25 09:34:51.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22267787, 22269352), (22269491, 22269573), (22269726, 22269788), (22269920, 22271557), (22269920, 22270913), (22270976, 22271557), (22271762, 22272368)] 2021-10-25 09:34:51.395 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22271557, 22273745, 'FBtr0078493_exon_5') contains intron (22271762, 22272368) 2021-10-25 09:34:51.396 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22271557, 22273745, 'FBtr0334747_exon_6') contains intron (22271762, 22272368) 2021-10-25 09:34:51.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078493_exon_5', 'FBtr0334747_exon_6'] 2021-10-25 09:34:51.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(376631, 377093), (377669, 377757), (377825, 377884), (378202, 378395), (378531, 378715), (378561, 378715), (378900, 382122), (382408, 386906), (386984, 387828), (386984, 390424), (391544, 393262), (391544, 393861)] 2021-10-25 09:34:51.404 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.404 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037324: ['FBtr0078794', 'FBtr0113193'] 2021-10-25 09:34:51.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029986: ['FBtr0071127'] 2021-10-25 09:34:51.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029986 has a single transcript. 2021-10-25 09:34:51.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029987: ['FBtr0071099'] 2021-10-25 09:34:51.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029987 has a single transcript. 2021-10-25 09:34:51.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029989: ['FBtr0071124'] 2021-10-25 09:34:51.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029989 has a single transcript. 2021-10-25 09:34:51.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085734: ['FBtr0114183'] 2021-10-25 09:34:51.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085734 has a single transcript. 2021-10-25 09:34:51.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029990: ['FBtr0071123'] 2021-10-25 09:34:51.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029990 has a single transcript. 2021-10-25 09:34:51.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042098: ['FBtr0071744'] 2021-10-25 09:34:51.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042098 has a single transcript. 2021-10-25 09:34:51.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085736: ['FBtr0302233'] 2021-10-25 09:34:51.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085736 has a single transcript. 2021-10-25 09:34:51.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5407502, 5407570), (5407726, 5408087), (5408292, 5408707), (5408933, 5409030), (5409545, 5409615), (5409924, 5410271), (5409924, 5412394)] 2021-10-25 09:34:51.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042101: ['FBtr0114516'] 2021-10-25 09:34:51.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029992: ['FBtr0071117'] 2021-10-25 09:34:51.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042101 has a single transcript. 2021-10-25 09:34:51.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029992 has a single transcript. 2021-10-25 09:34:51.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085753: ['FBtr0346871'] 2021-10-25 09:34:51.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085753 has a single transcript. 2021-10-25 09:34:51.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042102: ['FBtr0081777'] 2021-10-25 09:34:51.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042102 has a single transcript. 2021-10-25 09:34:51.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085765: ['FBtr0346890'] 2021-10-25 09:34:51.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085765 has a single transcript. 2021-10-25 09:34:51.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029993: ['FBtr0071106'] 2021-10-25 09:34:51.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029993 has a single transcript. 2021-10-25 09:34:51.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042103: ['FBtr0081775'] 2021-10-25 09:34:51.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042103 has a single transcript. 2021-10-25 09:34:51.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085771: ['FBtr0346896'] 2021-10-25 09:34:51.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085771 has a single transcript. 2021-10-25 09:34:51.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042104: ['FBtr0273255'] 2021-10-25 09:34:51.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042104 has a single transcript. 2021-10-25 09:34:51.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029994: ['FBtr0071116'] 2021-10-25 09:34:51.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029994 has a single transcript. 2021-10-25 09:34:51.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085784: ['FBtr0114236'] 2021-10-25 09:34:51.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085784 has a single transcript. 2021-10-25 09:34:51.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029995: ['FBtr0301736'] 2021-10-25 09:34:51.488 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0029995 has a single transcript. 2021-10-25 09:34:51.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042105: ['FBtr0113344', 'FBtr0113345'] 2021-10-25 09:34:51.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085786: ['FBtr0302232'] 2021-10-25 09:34:51.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085786 has a single transcript. 2021-10-25 09:34:51.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029996: ['FBtr0071112', 'FBtr0071113', 'FBtr0071114'] 2021-10-25 09:34:51.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085788: ['FBtr0114241'] 2021-10-25 09:34:51.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085788 has a single transcript. 2021-10-25 09:34:51.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085789: ['FBtr0347566'] 2021-10-25 09:34:51.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085789 has a single transcript. 2021-10-25 09:34:51.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085790: ['FBtr0114243'] 2021-10-25 09:34:51.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085790 has a single transcript. 2021-10-25 09:34:51.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037325: ['FBtr0078793'] 2021-10-25 09:34:51.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037325 has a single transcript. 2021-10-25 09:34:51.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085791: ['FBtr0114244'] 2021-10-25 09:34:51.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085791 has a single transcript. 2021-10-25 09:34:51.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085792: ['FBtr0114245'] 2021-10-25 09:34:51.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085792 has a single transcript. 2021-10-25 09:34:51.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037326: ['FBtr0339972', 'FBtr0078679', 'FBtr0347006', 'FBtr0334742'] 2021-10-25 09:34:51.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085802: ['FBtr0346874'] 2021-10-25 09:34:51.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085802 has a single transcript. 2021-10-25 09:34:51.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7786541, 7786600), (7787183, 7787243), (7787452, 7787517), (7787452, 7787728), (7787667, 7787728)] 2021-10-25 09:34:51.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085804: ['FBtr0114258'] 2021-10-25 09:34:51.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085804 has a single transcript. 2021-10-25 09:34:51.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085810: ['FBtr0114264'] 2021-10-25 09:34:51.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085810 has a single transcript. 2021-10-25 09:34:51.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033672: ['FBtr0088045', 'FBtr0339555'] 2021-10-25 09:34:51.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262647: ['FBtr0343613', 'FBtr0080199'] 2021-10-25 09:34:51.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085812: ['FBtr0114267'] 2021-10-25 09:34:51.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085812 has a single transcript. 2021-10-25 09:34:51.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8090147, 8091960), (8090147, 8093774), (8090147, 8091924)] 2021-10-25 09:34:51.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085813: ['FBtr0346892'] 2021-10-25 09:34:51.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085813 has a single transcript. 2021-10-25 09:34:51.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085819: ['FBtr0346904'] 2021-10-25 09:34:51.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085819 has a single transcript. 2021-10-25 09:34:51.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0085831: ['FBtr0114289'] 2021-10-25 09:34:51.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0085831 has a single transcript. 2021-10-25 09:34:51.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086021: ['FBtr0114297'] 2021-10-25 09:34:51.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086021 has a single transcript. 2021-10-25 09:34:51.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11986962, 11987026), (11987226, 11987280), (11987501, 11988001), (11988296, 11988361), (11988563, 11988622)] 2021-10-25 09:34:51.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086022: ['FBtr0114298'] 2021-10-25 09:34:51.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086022 has a single transcript. 2021-10-25 09:34:51.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042106: ['FBtr0303151', 'FBtr0334766'] 2021-10-25 09:34:51.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11123975, 11124039), (11124142, 11124195), (11124687, 11124744), (11124926, 11124999), (11125409, 11125482), (11126149, 11126214), (11126320, 11126388), (11126550, 11126605), (11126848, 11126903), (11127022, 11127077), (11127692, 11127757), (11128279, 11128335), (11128733, 11128806)] 2021-10-25 09:34:51.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.606 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086023: ['FBtr0114299'] 2021-10-25 09:34:51.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086023 has a single transcript. 2021-10-25 09:34:51.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5414659, 5416466), (5416898, 5437135), (5437649, 5442125), (5442248, 5454623), (5442248, 5442508), (5454737, 5454808), (5454922, 5455301), (5455369, 5455450)] 2021-10-25 09:34:51.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086024: ['FBtr0114300'] 2021-10-25 09:34:51.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086024 has a single transcript. 2021-10-25 09:34:51.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004181: ['FBtr0072454', 'FBtr0333174'] 2021-10-25 09:34:51.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086025: ['FBtr0114301'] 2021-10-25 09:34:51.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086025 has a single transcript. 2021-10-25 09:34:51.643 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0078679': ['FBtr0347006']} 2021-10-25 09:34:51.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086026: ['FBtr0114302'] 2021-10-25 09:34:51.643 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0347006']] 2021-10-25 09:34:51.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086026 has a single transcript. 2021-10-25 09:34:51.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086027: ['FBtr0114303'] 2021-10-25 09:34:51.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086027 has a single transcript. 2021-10-25 09:34:51.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23684129, 23684383), (23684705, 23685180), (23685414, 23685479)] 2021-10-25 09:34:51.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.654 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033673: ['FBtr0088043', 'FBtr0306003'] 2021-10-25 09:34:51.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086028: ['FBtr0114304'] 2021-10-25 09:34:51.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086028 has a single transcript. 2021-10-25 09:34:51.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029997: ['FBtr0071110', 'FBtr0071111', 'FBtr0071109', 'FBtr0340140'] 2021-10-25 09:34:51.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262656: ['FBtr0331605', 'FBtr0070525'] 2021-10-25 09:34:51.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25176616, 25176677)] 2021-10-25 09:34:51.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086029: ['FBtr0114305'] 2021-10-25 09:34:51.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086029 has a single transcript. 2021-10-25 09:34:51.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086030: ['FBtr0114306'] 2021-10-25 09:34:51.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086030 has a single transcript. 2021-10-25 09:34:51.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086031: ['FBtr0114307'] 2021-10-25 09:34:51.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086031 has a single transcript. 2021-10-25 09:34:51.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086032: ['FBtr0114308'] 2021-10-25 09:34:51.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086032 has a single transcript. 2021-10-25 09:34:51.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11989327, 11989381), (11989510, 11989566), (11990932, 11991064)] 2021-10-25 09:34:51.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.704 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086033: ['FBtr0114309'] 2021-10-25 09:34:51.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086033 has a single transcript. 2021-10-25 09:34:51.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3373723, 3374943), (3373723, 3374939), (3376233, 3384386)] 2021-10-25 09:34:51.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086034: ['FBtr0114310'] 2021-10-25 09:34:51.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086034 has a single transcript. 2021-10-25 09:34:51.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042110: ['FBtr0113346'] 2021-10-25 09:34:51.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042110 has a single transcript. 2021-10-25 09:34:51.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004183: ['FBtr0078851'] 2021-10-25 09:34:51.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004183 has a single transcript. 2021-10-25 09:34:51.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086035: ['FBtr0114311'] 2021-10-25 09:34:51.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086035 has a single transcript. 2021-10-25 09:34:51.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037327: ['FBtr0078770', 'FBtr0330026', 'FBtr0330027'] 2021-10-25 09:34:51.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042111: ['FBtr0085122', 'FBtr0085123', 'FBtr0333327'] 2021-10-25 09:34:51.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004185: ['FBtr0084528'] 2021-10-25 09:34:51.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004185 has a single transcript. 2021-10-25 09:34:51.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086036: ['FBtr0114312'] 2021-10-25 09:34:51.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086036 has a single transcript. 2021-10-25 09:34:51.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086037: ['FBtr0114313'] 2021-10-25 09:34:51.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086037 has a single transcript. 2021-10-25 09:34:51.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8096834, 8096900), (8097073, 8097161), (8097371, 8097433), (8097542, 8097612), (8097810, 8097868), (8099068, 8099140), (8099290, 8099350), (8099616, 8101068), (8099616, 8099708), (8099616, 8101086), (8101758, 8101945)] 2021-10-25 09:34:51.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004186: ['FBtr0084488'] 2021-10-25 09:34:51.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004186 has a single transcript. 2021-10-25 09:34:51.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8101068, 8102095, 'FBtr0071109_exon_1') contains intron (8101758, 8101945) 2021-10-25 09:34:51.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071109_exon_1'] 2021-10-25 09:34:51.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033677: ['FBtr0087975', 'FBtr0344873'] 2021-10-25 09:34:51.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086038: ['FBtr0114314'] 2021-10-25 09:34:51.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086038 has a single transcript. 2021-10-25 09:34:51.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004187: ['FBtr0084487'] 2021-10-25 09:34:51.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004187 has a single transcript. 2021-10-25 09:34:51.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086039: ['FBtr0114315'] 2021-10-25 09:34:51.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086039 has a single transcript. 2021-10-25 09:34:51.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004188: ['FBtr0084650'] 2021-10-25 09:34:51.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004188 has a single transcript. 2021-10-25 09:34:51.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086040: ['FBtr0114316'] 2021-10-25 09:34:51.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086040 has a single transcript. 2021-10-25 09:34:51.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262679: ['FBtr0305596'] 2021-10-25 09:34:51.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262679 has a single transcript. 2021-10-25 09:34:51.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004189: ['FBtr0084651'] 2021-10-25 09:34:51.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004189 has a single transcript. 2021-10-25 09:34:51.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086041: ['FBtr0114317'] 2021-10-25 09:34:51.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086041 has a single transcript. 2021-10-25 09:34:51.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262680: ['FBtr0347235'] 2021-10-25 09:34:51.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262680 has a single transcript. 2021-10-25 09:34:51.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262681: ['FBtr0344639'] 2021-10-25 09:34:51.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262681 has a single transcript. 2021-10-25 09:34:51.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004190: ['FBtr0084652'] 2021-10-25 09:34:51.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086042: ['FBtr0114318'] 2021-10-25 09:34:51.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004190 has a single transcript. 2021-10-25 09:34:51.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086042 has a single transcript. 2021-10-25 09:34:51.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262682: ['FBtr0309992'] 2021-10-25 09:34:51.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262682 has a single transcript. 2021-10-25 09:34:51.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086043: ['FBtr0114319'] 2021-10-25 09:34:51.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086043 has a single transcript. 2021-10-25 09:34:51.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004191: ['FBtr0080486'] 2021-10-25 09:34:51.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5460765, 5460849), (5462010, 5462073), (5462809, 5463730), (5462809, 5463051), (5462809, 5464214)] 2021-10-25 09:34:51.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004191 has a single transcript. 2021-10-25 09:34:51.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.809 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27243190, 27243252), (27243375, 27243446), (27243763, 27243822), (27243944, 27245016), (27243944, 27245189), (27243944, 27244645)] 2021-10-25 09:34:51.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.811 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12034432, 12035487), (12035710, 12035775)] 2021-10-25 09:34:51.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262683: ['FBtr0305602'] 2021-10-25 09:34:51.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262683 has a single transcript. 2021-10-25 09:34:51.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086044: ['FBtr0114320'] 2021-10-25 09:34:51.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086044 has a single transcript. 2021-10-25 09:34:51.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004192: ['FBtr0080443'] 2021-10-25 09:34:51.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004192 has a single transcript. 2021-10-25 09:34:51.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262685: ['FBtr0305607'] 2021-10-25 09:34:51.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262685 has a single transcript. 2021-10-25 09:34:51.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086045: ['FBtr0114321'] 2021-10-25 09:34:51.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262686: ['FBtr0305610'] 2021-10-25 09:34:51.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086045 has a single transcript. 2021-10-25 09:34:51.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262686 has a single transcript. 2021-10-25 09:34:51.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004197: ['FBtr0085128', 'FBtr0344121'] 2021-10-25 09:34:51.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262687: ['FBtr0305608', 'FBtr0343099'] 2021-10-25 09:34:51.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086046: ['FBtr0114322'] 2021-10-25 09:34:51.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086046 has a single transcript. 2021-10-25 09:34:51.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086047: ['FBtr0114323'] 2021-10-25 09:34:51.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086047 has a single transcript. 2021-10-25 09:34:51.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086048: ['FBtr0114324'] 2021-10-25 09:34:51.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086048 has a single transcript. 2021-10-25 09:34:51.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086049: ['FBtr0114325'] 2021-10-25 09:34:51.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086049 has a single transcript. 2021-10-25 09:34:51.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086051: ['FBtr0114327'] 2021-10-25 09:34:51.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086051 has a single transcript. 2021-10-25 09:34:51.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086052: ['FBtr0114328'] 2021-10-25 09:34:51.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086052 has a single transcript. 2021-10-25 09:34:51.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033679: ['FBtr0088022'] 2021-10-25 09:34:51.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033679 has a single transcript. 2021-10-25 09:34:51.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27173746, 27173863), (27174471, 27174565), (27174937, 27176211), (27176307, 27176371), (27176566, 27176855), (27177584, 27178833), (27179077, 27179371), (27179547, 27179673), (27179807, 27182997), (27183313, 27183807), (27183862, 27187686), (27187874, 27188346), (27188464, 27191505), (27192124, 27193943)] 2021-10-25 09:34:51.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086053: ['FBtr0114329'] 2021-10-25 09:34:51.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086053 has a single transcript. 2021-10-25 09:34:51.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11919306, 11919358), (11919452, 11919524)] 2021-10-25 09:34:51.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086054: ['FBtr0114330'] 2021-10-25 09:34:51.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086054 has a single transcript. 2021-10-25 09:34:51.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033680: ['FBtr0087981'] 2021-10-25 09:34:51.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033680 has a single transcript. 2021-10-25 09:34:51.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086055: ['FBtr0114331'] 2021-10-25 09:34:51.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086055 has a single transcript. 2021-10-25 09:34:51.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033683: ['FBtr0087982', 'FBtr0333061'] 2021-10-25 09:34:51.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086056: ['FBtr0114332'] 2021-10-25 09:34:51.916 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086056 has a single transcript. 2021-10-25 09:34:51.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0029999: ['FBtr0071151', 'FBtr0339695'] 2021-10-25 09:34:51.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037328: ['FBtr0078769'] 2021-10-25 09:34:51.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037328 has a single transcript. 2021-10-25 09:34:51.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086057: ['FBtr0114333'] 2021-10-25 09:34:51.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086057 has a single transcript. 2021-10-25 09:34:51.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042112: ['FBtr0076735'] 2021-10-25 09:34:51.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042112 has a single transcript. 2021-10-25 09:34:51.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037329: ['FBtr0078680', 'FBtr0078681'] 2021-10-25 09:34:51.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086058: ['FBtr0114334'] 2021-10-25 09:34:51.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086058 has a single transcript. 2021-10-25 09:34:51.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042118: ['FBtr0077022', 'FBtr0333582'] 2021-10-25 09:34:51.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262688: ['FBtr0305612'] 2021-10-25 09:34:51.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262688 has a single transcript. 2021-10-25 09:34:51.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004198: ['FBtr0071068', 'FBtr0114613', 'FBtr0305134', 'FBtr0331733'] 2021-10-25 09:34:51.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086059: ['FBtr0114335'] 2021-10-25 09:34:51.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086059 has a single transcript. 2021-10-25 09:34:51.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:51.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:51.955 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262689: ['FBtr0305611'] 2021-10-25 09:34:51.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262689 has a single transcript. 2021-10-25 09:34:51.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086060: ['FBtr0114336'] 2021-10-25 09:34:51.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086060 has a single transcript. 2021-10-25 09:34:51.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262690: ['FBtr0305615'] 2021-10-25 09:34:51.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262690 has a single transcript. 2021-10-25 09:34:51.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8117047, 8117113)] 2021-10-25 09:34:51.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086061: ['FBtr0114337'] 2021-10-25 09:34:51.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086061 has a single transcript. 2021-10-25 09:34:51.967 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8117011, 8119130, 'FBtr0071151_exon_1') contains intron (8117047, 8117113) 2021-10-25 09:34:51.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071151_exon_1'] 2021-10-25 09:34:51.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086062: ['FBtr0114338'] 2021-10-25 09:34:51.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086062 has a single transcript. 2021-10-25 09:34:51.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262699: ['FBtr0070687', 'FBtr0070686'] 2021-10-25 09:34:51.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086063: ['FBtr0114339'] 2021-10-25 09:34:51.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086063 has a single transcript. 2021-10-25 09:34:51.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5468149, 5468202), (5468629, 5468688), (5469030, 5469085)] 2021-10-25 09:34:51.983 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5467813, 5468629, 'FBtr0078681_exon_1') contains intron (5468149, 5468202) 2021-10-25 09:34:51.983 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078681_exon_1'] 2021-10-25 09:34:51.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:51.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086064: ['FBtr0114340'] 2021-10-25 09:34:51.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086064 has a single transcript. 2021-10-25 09:34:51.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086065: ['FBtr0114341'] 2021-10-25 09:34:51.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086065 has a single transcript. 2021-10-25 09:34:52.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6150632, 6150700)] 2021-10-25 09:34:52.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086066: ['FBtr0114342'] 2021-10-25 09:34:52.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086066 has a single transcript. 2021-10-25 09:34:52.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086067: ['FBtr0114343'] 2021-10-25 09:34:52.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086067 has a single transcript. 2021-10-25 09:34:52.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033685: ['FBtr0088019'] 2021-10-25 09:34:52.017 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033685 has a single transcript. 2021-10-25 09:34:52.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086068: ['FBtr0114344'] 2021-10-25 09:34:52.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086068 has a single transcript. 2021-10-25 09:34:52.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030000: ['FBtr0071194'] 2021-10-25 09:34:52.025 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030000 has a single transcript. 2021-10-25 09:34:52.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4668820, 4668903), (4669137, 4674366), (4674619, 4676253), (4676572, 4679264), (4676572, 4677354)] 2021-10-25 09:34:52.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033686: ['FBtr0087984'] 2021-10-25 09:34:52.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033686 has a single transcript. 2021-10-25 09:34:52.030 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086069: ['FBtr0114345'] 2021-10-25 09:34:52.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086069 has a single transcript. 2021-10-25 09:34:52.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030001: ['FBtr0071193', 'FBtr0340160', 'FBtr0340161'] 2021-10-25 09:34:52.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033687: ['FBtr0087985', 'FBtr0301127'] 2021-10-25 09:34:52.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086070: ['FBtr0114346'] 2021-10-25 09:34:52.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086070 has a single transcript. 2021-10-25 09:34:52.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037330: ['FBtr0078768'] 2021-10-25 09:34:52.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037330 has a single transcript. 2021-10-25 09:34:52.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7609538, 7628817), (7609538, 7645779), (7628871, 7632759), (7632336, 7632759), (7632795, 7645779), (7646979, 7660405), (7660890, 7660962), (7660890, 7660959), (7661138, 7662111), (7661138, 7662645), (7663554, 7670890), (7671308, 7671403)] 2021-10-25 09:34:52.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086071: ['FBtr0114347'] 2021-10-25 09:34:52.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086071 has a single transcript. 2021-10-25 09:34:52.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037332: ['FBtr0078683', 'FBtr0336769', 'FBtr0345253', 'FBtr0345254'] 2021-10-25 09:34:52.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086072: ['FBtr0114348'] 2021-10-25 09:34:52.056 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086072 has a single transcript. 2021-10-25 09:34:52.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086073: ['FBtr0114349'] 2021-10-25 09:34:52.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086073 has a single transcript. 2021-10-25 09:34:52.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042119: ['FBtr0077060', 'FBtr0346074'] 2021-10-25 09:34:52.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086074: ['FBtr0114350'] 2021-10-25 09:34:52.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086074 has a single transcript. 2021-10-25 09:34:52.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086075: ['FBtr0114351'] 2021-10-25 09:34:52.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086075 has a single transcript. 2021-10-25 09:34:52.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12153221, 12153443), (12153578, 12153644), (12153728, 12153905)] 2021-10-25 09:34:52.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086076: ['FBtr0114352'] 2021-10-25 09:34:52.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086076 has a single transcript. 2021-10-25 09:34:52.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262714: ['FBtr0332043', 'FBtr0332044', 'FBtr0075927', 'FBtr0075929', 'FBtr0114506', 'FBtr0075928'] 2021-10-25 09:34:52.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8122029, 8122369), (8122514, 8123191), (8122514, 8126689), (8123368, 8126689), (8126978, 8127060), (8127822, 8135384), (8127822, 8128853)] 2021-10-25 09:34:52.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086077: ['FBtr0114353'] 2021-10-25 09:34:52.103 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086077 has a single transcript. 2021-10-25 09:34:52.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086078: ['FBtr0114354'] 2021-10-25 09:34:52.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086078 has a single transcript. 2021-10-25 09:34:52.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6131605, 6131947)] 2021-10-25 09:34:52.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086079: ['FBtr0114355'] 2021-10-25 09:34:52.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086079 has a single transcript. 2021-10-25 09:34:52.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086080: ['FBtr0114356'] 2021-10-25 09:34:52.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086080 has a single transcript. 2021-10-25 09:34:52.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5475401, 5475462), (5475800, 5476305), (5476318, 5476540), (5476462, 5476540), (5477547, 5477609), (5477758, 5478903), (5477758, 5478885), (5479042, 5479117), (5479321, 5479386), (5479572, 5479632), (5479782, 5479845), (5479989, 5484327), (5484659, 5484729)] 2021-10-25 09:34:52.146 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.146 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033688: ['FBtr0088016'] 2021-10-25 09:34:52.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033688 has a single transcript. 2021-10-25 09:34:52.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086081: ['FBtr0114357'] 2021-10-25 09:34:52.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086081 has a single transcript. 2021-10-25 09:34:52.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033690: ['FBtr0088012'] 2021-10-25 09:34:52.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033690 has a single transcript. 2021-10-25 09:34:52.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033691: ['FBtr0088011'] 2021-10-25 09:34:52.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033691 has a single transcript. 2021-10-25 09:34:52.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086082: ['FBtr0114358'] 2021-10-25 09:34:52.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086082 has a single transcript. 2021-10-25 09:34:52.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033692: ['FBtr0087989', 'FBtr0339595'] 2021-10-25 09:34:52.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086129: ['FBtr0307174', 'FBtr0072249'] 2021-10-25 09:34:52.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042125: ['FBtr0321267'] 2021-10-25 09:34:52.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042125 has a single transcript. 2021-10-25 09:34:52.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042126: ['FBtr0289986'] 2021-10-25 09:34:52.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042126 has a single transcript. 2021-10-25 09:34:52.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042127: ['FBtr0080315'] 2021-10-25 09:34:52.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042127 has a single transcript. 2021-10-25 09:34:52.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030003: ['FBtr0071152'] 2021-10-25 09:34:52.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030003 has a single transcript. 2021-10-25 09:34:52.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042129: ['FBtr0332183'] 2021-10-25 09:34:52.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042129 has a single transcript. 2021-10-25 09:34:52.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004227: ['FBtr0074233', 'FBtr0074232', 'FBtr0100586', 'FBtr0340313'] 2021-10-25 09:34:52.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030004: ['FBtr0071153'] 2021-10-25 09:34:52.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030004 has a single transcript. 2021-10-25 09:34:52.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12180540, 12180625)] 2021-10-25 09:34:52.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042131: ['FBtr0073361'] 2021-10-25 09:34:52.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042131 has a single transcript. 2021-10-25 09:34:52.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030005: ['FBtr0300914'] 2021-10-25 09:34:52.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030005 has a single transcript. 2021-10-25 09:34:52.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030006: ['FBtr0071191', 'FBtr0345988'] 2021-10-25 09:34:52.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042132: ['FBtr0074810', 'FBtr0074811', 'FBtr0331746', 'FBtr0331747'] 2021-10-25 09:34:52.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24086702, 24087531), (24086830, 24087531), (24087716, 24087775), (24088010, 24088064), (24088543, 24088603), (24088878, 24088941), (24089267, 24089555), (24089705, 24089765), (24090059, 24090121)] 2021-10-25 09:34:52.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.243 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12806054, 12806239), (12806337, 12807092), (12806337, 12806867), (12806337, 12806978), (12807830, 12807885), (12808476, 12810205), (12810663, 12810727), (12811588, 12811677), (12811588, 12811674), (12811588, 12811647), (12811886, 12811949), (12812220, 12812279), (12812450, 12812508), (12812616, 12812679)] 2021-10-25 09:34:52.246 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033693: ['FBtr0100143'] 2021-10-25 09:34:52.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033693 has a single transcript. 2021-10-25 09:34:52.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:52.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033696: ['FBtr0088009'] 2021-10-25 09:34:52.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033696 has a single transcript. 2021-10-25 09:34:52.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037336: ['FBtr0078762', 'FBtr0078761', 'FBtr0336771'] 2021-10-25 09:34:52.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033697: ['FBtr0087993'] 2021-10-25 09:34:52.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033697 has a single transcript. 2021-10-25 09:34:52.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16362054, 16363357), (16364630, 16365204), (16365513, 16365586), (16365642, 16366903), (16365642, 16371313)] 2021-10-25 09:34:52.298 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16365586, 16368526, 'FBtr0100586_exon_4') contains intron (16365642, 16366903) 2021-10-25 09:34:52.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100586_exon_4'] 2021-10-25 09:34:52.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086130: ['FBtr0078009'] 2021-10-25 09:34:52.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086130 has a single transcript. 2021-10-25 09:34:52.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033698: ['FBtr0088008'] 2021-10-25 09:34:52.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033698 has a single transcript. 2021-10-25 09:34:52.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086134: ['FBtr0082590'] 2021-10-25 09:34:52.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086134 has a single transcript. 2021-10-25 09:34:52.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033699: ['FBtr0088006', 'FBtr0088007'] 2021-10-25 09:34:52.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19742892, 19742954), (19742892, 19743443), (19742905, 19743443), (19743706, 19744261)] 2021-10-25 09:34:52.314 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19741223, 19743706, 'FBtr0331746_exon_2') contains intron (19742892, 19742954) 2021-10-25 09:34:52.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331746_exon_2'] 2021-10-25 09:34:52.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086200: ['FBtr0343809', 'FBtr0347030'] 2021-10-25 09:34:52.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030007: ['FBtr0071190'] 2021-10-25 09:34:52.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030007 has a single transcript. 2021-10-25 09:34:52.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030008: ['FBtr0071155'] 2021-10-25 09:34:52.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030008 has a single transcript. 2021-10-25 09:34:52.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5541238, 5541328), (5541493, 5541553), (5541836, 5541891), (5542202, 5542267), (5542366, 5542417), (5542875, 5542935), (5543295, 5543365), (5544575, 5544746), (5545068, 5546192), (5545068, 5545670), (5545742, 5546192), (5546400, 5546455), (5546734, 5547606), (5546734, 5547336)] 2021-10-25 09:34:52.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18665286, 18665675), (18665914, 18666352), (18666628, 18666691)] 2021-10-25 09:34:52.362 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18665131, 18665914, 'FBtr0347030_exon_1') contains intron (18665286, 18665675) 2021-10-25 09:34:52.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347030_exon_1'] 2021-10-25 09:34:52.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030009: ['FBtr0331613'] 2021-10-25 09:34:52.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030009 has a single transcript. 2021-10-25 09:34:52.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12199111, 12199312), (12199589, 12199833), (12200039, 12200427), (12200039, 12200115), (12200241, 12200774), (12200550, 12200774)] 2021-10-25 09:34:52.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030010: ['FBtr0071157', 'FBtr0331614'] 2021-10-25 09:34:52.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8149476, 8149544), (8149476, 8149550)] 2021-10-25 09:34:52.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.420 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086251: ['FBtr0081502', 'FBtr0333084', 'FBtr0333085'] 2021-10-25 09:34:52.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033701: ['FBtr0087995'] 2021-10-25 09:34:52.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033701 has a single transcript. 2021-10-25 09:34:52.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033702: ['FBtr0114562', 'FBtr0331944'] 2021-10-25 09:34:52.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004228: ['FBtr0075602', 'FBtr0303786', 'FBtr0334084'] 2021-10-25 09:34:52.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042133: ['FBtr0081386'] 2021-10-25 09:34:52.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042133 has a single transcript. 2021-10-25 09:34:52.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037338: ['FBtr0078688'] 2021-10-25 09:34:52.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037338 has a single transcript. 2021-10-25 09:34:52.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042134: ['FBtr0075098', 'FBtr0345806'] 2021-10-25 09:34:52.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037339: ['FBtr0078755', 'FBtr0078756', 'FBtr0078757'] 2021-10-25 09:34:52.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030011: ['FBtr0071189'] 2021-10-25 09:34:52.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030011 has a single transcript. 2021-10-25 09:34:52.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030012: ['FBtr0071158'] 2021-10-25 09:34:52.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030012 has a single transcript. 2021-10-25 09:34:52.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12225244, 12225703), (12226344, 12229107)] 2021-10-25 09:34:52.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21146885, 21146939), (21146885, 21146948), (21148136, 21148200)] 2021-10-25 09:34:52.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030013: ['FBtr0303457', 'FBtr0345987'] 2021-10-25 09:34:52.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262716: ['FBtr0076737', 'FBtr0334087'] 2021-10-25 09:34:52.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15518028, 15518307), (15518028, 15519456)] 2021-10-25 09:34:52.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18671188, 18671267), (18671434, 18671489), (18671672, 18672630)] 2021-10-25 09:34:52.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8158386, 8158564)] 2021-10-25 09:34:52.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8114051, 8114112), (8114196, 8114256), (8114793, 8115029), (8115344, 8115407), (8115588, 8115681)] 2021-10-25 09:34:52.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033703: ['FBtr0087996'] 2021-10-25 09:34:52.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033703 has a single transcript. 2021-10-25 09:34:52.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5558301, 5558366), (5558435, 5558498), (5559319, 5559378), (5559574, 5559671), (5559802, 5560074), (5560193, 5562266), (5560193, 5560776), (5562894, 5562964), (5563345, 5563541), (5563372, 5563541)] 2021-10-25 09:34:52.547 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033705: ['FBtr0087998', 'FBtr0087999', 'FBtr0339585'] 2021-10-25 09:34:52.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042135: ['FBtr0088935', 'FBtr0088936', 'FBtr0088937', 'FBtr0330327', 'FBtr0330328', 'FBtr0306239'] 2021-10-25 09:34:52.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086253: ['FBtr0084320', 'FBtr0310040'] 2021-10-25 09:34:52.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030014: ['FBtr0071160'] 2021-10-25 09:34:52.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030014 has a single transcript. 2021-10-25 09:34:52.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030015: ['FBtr0071187'] 2021-10-25 09:34:52.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030015 has a single transcript. 2021-10-25 09:34:52.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004237: ['FBtr0082851', 'FBtr0300590', 'FBtr0310621', 'FBtr0334495'] 2021-10-25 09:34:52.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262717: ['FBtr0305663', 'FBtr0305664', 'FBtr0305665', 'FBtr0305666'] 2021-10-25 09:34:52.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030016: ['FBtr0071186'] 2021-10-25 09:34:52.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030016 has a single transcript. 2021-10-25 09:34:52.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030017: ['FBtr0071185', 'FBtr0340143', 'FBtr0331300'] 2021-10-25 09:34:52.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12254354, 12254420), (12254364, 12254420), (12255015, 12255071), (12255221, 12255273), (12255221, 12255298)] 2021-10-25 09:34:52.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22750334, 22750388), (22750338, 22750388)] 2021-10-25 09:34:52.630 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037340: ['FBtr0078754', 'FBtr0336763'] 2021-10-25 09:34:52.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086254: ['FBtr0076138', 'FBtr0076139', 'FBtr0331546', 'FBtr0331547'] 2021-10-25 09:34:52.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8168894, 8168965), (8169420, 8169489)] 2021-10-25 09:34:52.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13657125, 13658461), (13658297, 13658461), (13658564, 13658636), (13659648, 13660339)] 2021-10-25 09:34:52.695 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.695 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10687302, 10689260), (10689764, 10690242), (10690502, 10691349), (10691449, 10692345), (10693122, 10693180), (10693374, 10693430), (10693847, 10693977)] 2021-10-25 09:34:52.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10693430, 10696270, 'FBtr0305665_exon_7') contains intron (10693847, 10693977) 2021-10-25 09:34:52.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10693430, 10696270, 'FBtr0305666_exon_7') contains intron (10693847, 10693977) 2021-10-25 09:34:52.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305665_exon_7', 'FBtr0305666_exon_7'] 2021-10-25 09:34:52.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5564340, 5564405)] 2021-10-25 09:34:52.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.703 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071185': ['FBtr0331300']} 2021-10-25 09:34:52.703 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331300']] 2021-10-25 09:34:52.709 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0305665': ['FBtr0305666']} 2021-10-25 09:34:52.710 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0305666']] 2021-10-25 09:34:52.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7719306, 7719375), (7719574, 7719640), (7719780, 7719842), (7719996, 7725688), (7719996, 7722033), (7725771, 7725867), (7725789, 7725867), (7725995, 7726294), (7725995, 7727370), (7725995, 7727941), (7728196, 7728268), (7728378, 7728824), (7728957, 7729015), (7729158, 7729429), (7729581, 7729641), (7729708, 7735376), (7729708, 7735153)] 2021-10-25 09:34:52.713 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033706: ['FBtr0088000'] 2021-10-25 09:34:52.732 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088937': ['FBtr0330327']} 2021-10-25 09:34:52.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033706 has a single transcript. 2021-10-25 09:34:52.732 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330327']] 2021-10-25 09:34:52.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033708: ['FBtr0087972', 'FBtr0087973'] 2021-10-25 09:34:52.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030018: ['FBtr0071184', 'FBtr0303842', 'FBtr0303843', 'FBtr0303844'] 2021-10-25 09:34:52.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037341: ['FBtr0078689', 'FBtr0078692', 'FBtr0290215'] 2021-10-25 09:34:52.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11620665, 11621213), (11620665, 11620922), (11621103, 11621213), (11621422, 11621482), (11621966, 11622032), (11622175, 11624113), (11622175, 11623547), (11624198, 11624261)] 2021-10-25 09:34:52.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.791 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12299075, 12299137), (12299876, 12299932), (12300310, 12300374), (12300594, 12300653), (12300936, 12300997), (12301107, 12302166), (12301234, 12302166)] 2021-10-25 09:34:52.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262719: ['FBtr0308608', 'FBtr0305700'] 2021-10-25 09:34:52.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004240: ['FBtr0086620'] 2021-10-25 09:34:52.827 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004240 has a single transcript. 2021-10-25 09:34:52.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5564982, 5566087), (5565024, 5566087), (5565453, 5566087), (5566398, 5566466), (5566885, 5566944)] 2021-10-25 09:34:52.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8474742, 8474802), (8475572, 8475634), (8477318, 8477380), (8478548, 8478614), (8480684, 8494118), (8494311, 8507089), (8494311, 8506107), (8506199, 8507089)] 2021-10-25 09:34:52.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004242: ['FBtr0077726', 'FBtr0077727', 'FBtr0077728', 'FBtr0343993', 'FBtr0332218', 'FBtr0332219', 'FBtr0332220', 'FBtr0345331'] 2021-10-25 09:34:52.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8173461, 8173860), (8173975, 8174037), (8174214, 8174822), (8174214, 8174546), (8174567, 8174822), (8174998, 8175068), (8175235, 8175301), (8175954, 8176014), (8176454, 8176552), (8176872, 8177071)] 2021-10-25 09:34:52.854 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8176552, 8177185, 'FBtr0071184_exon_1') contains intron (8176872, 8177071) 2021-10-25 09:34:52.854 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8176552, 8177185, 'FBtr0303842_exon_1') contains intron (8176872, 8177071) 2021-10-25 09:34:52.854 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8176552, 8177185, 'FBtr0303843_exon_1') contains intron (8176872, 8177071) 2021-10-25 09:34:52.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033710: ['FBtr0087893'] 2021-10-25 09:34:52.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071184_exon_1', 'FBtr0303842_exon_1', 'FBtr0303843_exon_1'] 2021-10-25 09:34:52.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033710 has a single transcript. 2021-10-25 09:34:52.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033712: ['FBtr0087896', 'FBtr0339628', 'FBtr0472670'] 2021-10-25 09:34:52.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262721: ['FBtr0305706'] 2021-10-25 09:34:52.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262721 has a single transcript. 2021-10-25 09:34:52.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042137: ['FBtr0307504'] 2021-10-25 09:34:52.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042137 has a single transcript. 2021-10-25 09:34:52.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262722: ['FBtr0347198'] 2021-10-25 09:34:52.911 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262722 has a single transcript. 2021-10-25 09:34:52.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037342: ['FBtr0078753'] 2021-10-25 09:34:52.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037342 has a single transcript. 2021-10-25 09:34:52.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042138: ['FBtr0076103', 'FBtr0076104', 'FBtr0076105', 'FBtr0331544', 'FBtr0331545'] 2021-10-25 09:34:52.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262728: ['FBtr0089500', 'FBtr0301509', 'FBtr0346652'] 2021-10-25 09:34:52.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037344: ['FBtr0078752', 'FBtr0336762'] 2021-10-25 09:34:52.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12321650, 12321711)] 2021-10-25 09:34:52.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086265: ['FBtr0079238', 'FBtr0333227'] 2021-10-25 09:34:52.936 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087896': ['FBtr0472670']} 2021-10-25 09:34:52.937 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0472670']] 2021-10-25 09:34:52.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5580045, 5580114), (5580305, 5580381), (5580510, 5580572), (5580640, 5580723), (5584678, 5585171), (5584678, 5584779), (5584835, 5585171), (5587451, 5587520)] 2021-10-25 09:34:52.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5964422, 5964744)] 2021-10-25 09:34:52.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.985 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23688710, 23688932), (23689131, 23689192), (23689306, 23689368), (23689456, 23689513), (23689613, 23689669)] 2021-10-25 09:34:52.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:52.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033713: ['FBtr0087964', 'FBtr0087965', 'FBtr0087966'] 2021-10-25 09:34:52.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:52.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030025: ['FBtr0071166'] 2021-10-25 09:34:52.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030025 has a single transcript. 2021-10-25 09:34:53.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030026: ['FBtr0071183', 'FBtr0344985'] 2021-10-25 09:34:53.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037345: ['FBtr0078699'] 2021-10-25 09:34:53.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037345 has a single transcript. 2021-10-25 09:34:53.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11628126, 11628342), (11628136, 11628342), (11628250, 11628342), (11628501, 11628562), (11628594, 11628960), (11629504, 11629580), (11629598, 11630229), (11629598, 11630466)] 2021-10-25 09:34:53.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2772653, 2779182), (2782839, 2783040), (2782940, 2783040), (2783274, 2785538), (2785672, 2787053), (2787162, 2792194), (2787165, 2792194), (2787168, 2792194), (2787168, 2789346), (2789946, 2792194), (2792371, 2792481), (2792676, 2793174), (2793264, 2793327), (2793270, 2793327), (2793587, 2793647), (2793908, 2795488), (2793908, 2799908), (2793908, 2798485), (2798836, 2799908)] 2021-10-25 09:34:53.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2792481, 2793587, 'FBtr0332219_exon_4') contains intron (2792676, 2793174) 2021-10-25 09:34:53.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2783040, 2785672, 'FBtr0332220_exon_10') contains intron (2783274, 2785538) 2021-10-25 09:34:53.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037347: ['FBtr0333278', 'FBtr0333279', 'FBtr0273377'] 2021-10-25 09:34:53.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332219_exon_4', 'FBtr0332220_exon_10'] 2021-10-25 09:34:53.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086266: ['FBtr0079240'] 2021-10-25 09:34:53.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086266 has a single transcript. 2021-10-25 09:34:53.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8242143, 8242204), (8242256, 8242950)] 2021-10-25 09:34:53.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086346: ['FBtr0085241'] 2021-10-25 09:34:53.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086346 has a single transcript. 2021-10-25 09:34:53.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12324587, 12324657), (12325993, 12326072), (12325993, 12326145)] 2021-10-25 09:34:53.053 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12324657, 12326115, 'FBtr0087966_exon_1') contains intron (12325993, 12326072) 2021-10-25 09:34:53.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087966_exon_1'] 2021-10-25 09:34:53.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086347: ['FBtr0080035', 'FBtr0080036', 'FBtr0304138'] 2021-10-25 09:34:53.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262730: ['FBtr0307164', 'FBtr0307165', 'FBtr0339696', 'FBtr0339697'] 2021-10-25 09:34:53.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5601669, 5601732), (5601669, 5601738), (5601862, 5601913), (5601862, 5601959), (5602930, 5602989)] 2021-10-25 09:34:53.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030027: ['FBtr0071170', 'FBtr0307282'] 2021-10-25 09:34:53.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10492499, 10492556), (10492714, 10492788), (10494195, 10494287), (10494367, 10494427), (10494811, 10494878), (10495104, 10496628), (10496848, 10497852), (10498155, 10505925), (10506106, 10506542), (10506106, 10506683)] 2021-10-25 09:34:53.128 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10505925, 10506779, 'FBtr0080036_exon_1') contains intron (10506106, 10506542) 2021-10-25 09:34:53.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080036_exon_1'] 2021-10-25 09:34:53.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8252887, 8253057), (8253456, 8264088), (8264253, 8265913), (8266373, 8266447), (8266658, 8267591), (8268436, 8268512), (8268714, 8268781), (8269856, 8271939)] 2021-10-25 09:34:53.143 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8252669, 8253456, 'FBtr0071170_exon_1') contains intron (8252887, 8253057) 2021-10-25 09:34:53.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071170_exon_1'] 2021-10-25 09:34:53.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033715: ['FBtr0087899', 'FBtr0301195'] 2021-10-25 09:34:53.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6226220, 6226439), (6226732, 6226799), (6227915, 6227976), (6228182, 6228243), (6228403, 6228478), (6228879, 6228947), (6229306, 6229370), (6229790, 6229845), (6229790, 6229848), (6229984, 6230048), (6230172, 6230234), (6230667, 6230732), (6230986, 6231042)] 2021-10-25 09:34:53.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037350: ['FBtr0078740', 'FBtr0113194'] 2021-10-25 09:34:53.191 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12335376, 12335440), (12335376, 12335431)] 2021-10-25 09:34:53.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.192 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030028: ['FBtr0071179', 'FBtr0307283'] 2021-10-25 09:34:53.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042146: ['FBtr0070171'] 2021-10-25 09:34:53.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042146 has a single transcript. 2021-10-25 09:34:53.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042173: ['FBtr0089426'] 2021-10-25 09:34:53.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042173 has a single transcript. 2021-10-25 09:34:53.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042175: ['FBtr0081364', 'FBtr0332971'] 2021-10-25 09:34:53.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5622688, 5622747), (5622688, 5623774)] 2021-10-25 09:34:53.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086348: ['FBtr0076623'] 2021-10-25 09:34:53.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086348 has a single transcript. 2021-10-25 09:34:53.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086350: ['FBtr0087014'] 2021-10-25 09:34:53.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086350 has a single transcript. 2021-10-25 09:34:53.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8270866, 8271162)] 2021-10-25 09:34:53.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086355: ['FBtr0085582', 'FBtr0085583', 'FBtr0085584'] 2021-10-25 09:34:53.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033716: ['FBtr0087902', 'FBtr0301874'] 2021-10-25 09:34:53.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20457402, 20457467), (20457990, 20458058), (20458430, 20458497)] 2021-10-25 09:34:53.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037351: ['FBtr0078705', 'FBtr0335214'] 2021-10-25 09:34:53.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12338041, 12338532), (12338448, 12338532)] 2021-10-25 09:34:53.307 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.307 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030029: ['FBtr0071178'] 2021-10-25 09:34:53.316 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030029 has a single transcript. 2021-10-25 09:34:53.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030030: ['FBtr0071171', 'FBtr0339833', 'FBtr0339834'] 2021-10-25 09:34:53.326 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30133448, 30133509), (30134094, 30134278), (30134094, 30134250)] 2021-10-25 09:34:53.327 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30133509, 30134309, 'FBtr0085584_exon_1') contains intron (30134094, 30134278) 2021-10-25 09:34:53.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085584_exon_1'] 2021-10-25 09:34:53.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5624520, 5624889), (5625130, 5625332), (5625130, 5625513)] 2021-10-25 09:34:53.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262731: ['FBtr0452090'] 2021-10-25 09:34:53.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262731 has a single transcript. 2021-10-25 09:34:53.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042177: ['FBtr0075313', 'FBtr0331559'] 2021-10-25 09:34:53.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262732: ['FBtr0330137', 'FBtr0305570', 'FBtr0075393', 'FBtr0075394', 'FBtr0305569'] 2021-10-25 09:34:53.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033717: ['FBtr0087959', 'FBtr0087960', 'FBtr0087957', 'FBtr0087958'] 2021-10-25 09:34:53.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004244: ['FBtr0076534', 'FBtr0076536', 'FBtr0309054', 'FBtr0333834', 'FBtr0333835', 'FBtr0333836'] 2021-10-25 09:34:53.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16603277, 16603773), (16603946, 16604005), (16604721, 16604780), (16604724, 16604780), (16605187, 16605713), (16605823, 16605882), (16607005, 16607130), (16607348, 16607427)] 2021-10-25 09:34:53.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037354: ['FBtr0078708'] 2021-10-25 09:34:53.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037354 has a single transcript. 2021-10-25 09:34:53.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8273754, 8274279), (8274626, 8274756), (8274626, 8274708), (8275208, 8275267)] 2021-10-25 09:34:53.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037356: ['FBtr0078709'] 2021-10-25 09:34:53.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037356 has a single transcript. 2021-10-25 09:34:53.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037358: ['FBtr0078732', 'FBtr0334953'] 2021-10-25 09:34:53.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086356: ['FBtr0087641'] 2021-10-25 09:34:53.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086356 has a single transcript. 2021-10-25 09:34:53.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042178: ['FBtr0075312', 'FBtr0331558', 'FBtr0345368'] 2021-10-25 09:34:53.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086357: ['FBtr0079266', 'FBtr0345753'] 2021-10-25 09:34:53.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5653754, 5654655)] 2021-10-25 09:34:53.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16574455, 16574524), (16574752, 16574852), (16574976, 16575186), (16575347, 16575716)] 2021-10-25 09:34:53.463 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.464 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16574644, 16574976, 'FBtr0075394_exon_1') contains intron (16574752, 16574852) 2021-10-25 09:34:53.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075394_exon_1'] 2021-10-25 09:34:53.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12340504, 12340565), (12341140, 12341209), (12341429, 12341487), (12341782, 12344459), (12341782, 12344520), (12341782, 12341983), (12341782, 12341844)] 2021-10-25 09:34:53.477 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.478 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.483 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330137': ['FBtr0075393']} 2021-10-25 09:34:53.483 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0075393']] 2021-10-25 09:34:53.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030033: ['FBtr0071173'] 2021-10-25 09:34:53.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030033 has a single transcript. 2021-10-25 09:34:53.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6477897, 6477970), (6479062, 6480033), (6480101, 6480323)] 2021-10-25 09:34:53.503 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.503 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030034: ['FBtr0071174', 'FBtr0343353'] 2021-10-25 09:34:53.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037359: ['FBtr0078712'] 2021-10-25 09:34:53.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037359 has a single transcript. 2021-10-25 09:34:53.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9151112, 9151247), (9151112, 9151253), (9151484, 9151571), (9151873, 9155025), (9155310, 9159609), (9155310, 9157940), (9158078, 9161263), (9159747, 9161263), (9161346, 9162747), (9162974, 9168799), (9162974, 9170637), (9168867, 9170992), (9170705, 9170992), (9171090, 9177093), (9178779, 9182046), (9178779, 9179156)] 2021-10-25 09:34:53.520 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9151253, 9151873, 'FBtr0076534_exon_8') contains intron (9151484, 9151571) 2021-10-25 09:34:53.520 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9151253, 9151873, 'FBtr0076536_exon_9') contains intron (9151484, 9151571) 2021-10-25 09:34:53.521 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9151253, 9151873, 'FBtr0333834_exon_9') contains intron (9151484, 9151571) 2021-10-25 09:34:53.521 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9151253, 9151873, 'FBtr0333835_exon_9') contains intron (9151484, 9151571) 2021-10-25 09:34:53.521 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9151247, 9151873, 'FBtr0333836_exon_9') contains intron (9151484, 9151571) 2021-10-25 09:34:53.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076534_exon_8', 'FBtr0076536_exon_9', 'FBtr0333834_exon_9', 'FBtr0333835_exon_9', 'FBtr0333836_exon_9'] 2021-10-25 09:34:53.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037360: ['FBtr0078730'] 2021-10-25 09:34:53.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037360 has a single transcript. 2021-10-25 09:34:53.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16595599, 16596086), (16596259, 16596318), (16596676, 16596736), (16597034, 16597093), (16597037, 16597093), (16597500, 16598026), (16598136, 16598195), (16599318, 16599443), (16599661, 16599740)] 2021-10-25 09:34:53.527 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16596318, 16597037, 'FBtr0075312_exon_3') contains intron (16596676, 16596736) 2021-10-25 09:34:53.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075312_exon_3'] 2021-10-25 09:34:53.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037363: ['FBtr0078716', 'FBtr0334946'] 2021-10-25 09:34:53.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8400003, 8400116), (8400672, 8400948)] 2021-10-25 09:34:53.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.554 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086358: ['FBtr0086516', 'FBtr0331925', 'FBtr0305333'] 2021-10-25 09:34:53.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5670572, 5672712), (5670572, 5673489), (5672733, 5673489), (5676560, 5677268), (5677602, 5677664), (5677764, 5678013)] 2021-10-25 09:34:53.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030035: ['FBtr0071175'] 2021-10-25 09:34:53.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030035 has a single transcript. 2021-10-25 09:34:53.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030037: ['FBtr0071246', 'FBtr0300383', 'FBtr0345986'] 2021-10-25 09:34:53.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262733: ['FBtr0343995', 'FBtr0100507', 'FBtr0073321', 'FBtr0304990', 'FBtr0100508', 'FBtr0302594', 'FBtr0304989', 'FBtr0100504', 'FBtr0100505'] 2021-10-25 09:34:53.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042179: ['FBtr0073204', 'FBtr0332979'] 2021-10-25 09:34:53.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19292860, 19299169), (19298630, 19299169), (19300799, 19302674), (19302878, 19302941), (19303517, 19304111), (19304165, 19304223)] 2021-10-25 09:34:53.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033720: ['FBtr0087911', 'FBtr0332250'] 2021-10-25 09:34:53.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037364: ['FBtr0078727'] 2021-10-25 09:34:53.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037364 has a single transcript. 2021-10-25 09:34:53.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037365: ['FBtr0078726', 'FBtr0334950'] 2021-10-25 09:34:53.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8434953, 8435017), (8436211, 8436272)] 2021-10-25 09:34:53.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4060580, 4060637), (4061047, 4061113), (4061226, 4061281)] 2021-10-25 09:34:53.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12371685, 12371762), (12371685, 12371765), (12372276, 12372332), (12372507, 12372563), (12372648, 12372809), (12372930, 12372995), (12373150, 12373206), (12373590, 12373647), (12373828, 12373884), (12374069, 12374122), (12374266, 12374329), (12374821, 12374873)] 2021-10-25 09:34:53.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.695 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:53.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086359: ['FBtr0082181'] 2021-10-25 09:34:53.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086359 has a single transcript. 2021-10-25 09:34:53.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042180: ['FBtr0071688', 'FBtr0345664'] 2021-10-25 09:34:53.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033721: ['FBtr0087912'] 2021-10-25 09:34:53.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033721 has a single transcript. 2021-10-25 09:34:53.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037368: ['FBtr0078720', 'FBtr0343988', 'FBtr0343989'] 2021-10-25 09:34:53.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033723: ['FBtr0087956'] 2021-10-25 09:34:53.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033723 has a single transcript. 2021-10-25 09:34:53.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086361: ['FBtr0309241', 'FBtr0085442', 'FBtr0085443', 'FBtr0085444', 'FBtr0085445', 'FBtr0085446'] 2021-10-25 09:34:53.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033724: ['FBtr0087915', 'FBtr0339629'] 2021-10-25 09:34:53.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004359: ['FBtr0085065', 'FBtr0336724'] 2021-10-25 09:34:53.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21615737, 21615804), (21616586, 21616645)] 2021-10-25 09:34:53.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030038: ['FBtr0071197', 'FBtr0112961', 'FBtr0112962', 'FBtr0339438'] 2021-10-25 09:34:53.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12383204, 12383603)] 2021-10-25 09:34:53.805 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.805 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.806 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26882063, 26883626), (26884223, 26909475)] 2021-10-25 09:34:53.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.807 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5733616, 5733679), (5733616, 5733686), (5733616, 5733685), (5734432, 5734501)] 2021-10-25 09:34:53.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4595255, 4595316), (4595624, 4595691), (4595627, 4595691), (4595945, 4596063), (4596280, 4598153), (4599005, 4612858), (4599005, 4625936), (4599005, 4625209), (4612889, 4612988), (4612889, 4625209), (4625328, 4625936), (4625393, 4625936), (4625393, 4625762)] 2021-10-25 09:34:53.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042182: ['FBtr0100545', 'FBtr0345323'] 2021-10-25 09:34:53.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004360: ['FBtr0088512', 'FBtr0339383'] 2021-10-25 09:34:53.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033725: ['FBtr0087916', 'FBtr0087917', 'FBtr0301372', 'FBtr0339630', 'FBtr0339631', 'FBtr0345948'] 2021-10-25 09:34:53.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8437294, 8438919), (8437294, 8439108), (8439037, 8439108), (8439758, 8439818), (8440294, 8440360), (8440481, 8440544)] 2021-10-25 09:34:53.876 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8438707, 8439758, 'FBtr0112962_exon_1') contains intron (8439037, 8439108) 2021-10-25 09:34:53.876 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8438919, 8439758, 'FBtr0339438_exon_2') contains intron (8439037, 8439108) 2021-10-25 09:34:53.876 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112962_exon_1', 'FBtr0339438_exon_2'] 2021-10-25 09:34:53.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8244141, 8244196), (8246185, 8246242), (8246400, 8246454), (8246608, 8246670), (8247328, 8247385), (8247430, 8247485), (8247651, 8247708), (8247894, 8247953)] 2021-10-25 09:34:53.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29592167, 29593271), (29593204, 29593271), (29594163, 29594226), (29594344, 29597240), (29594344, 29596487), (29596571, 29597240), (29597346, 29597418), (29597473, 29597775), (29597473, 29604509), (29597473, 29598163), (29597908, 29598163), (29604581, 29617054)] 2021-10-25 09:34:53.897 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29593093, 29594163, 'FBtr0085445_exon_1') contains intron (29593204, 29593271) 2021-10-25 09:34:53.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085445_exon_1'] 2021-10-25 09:34:53.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9495253, 9501375), (9495253, 9501370), (9501588, 9501972), (9502256, 9502321), (9502509, 9502726)] 2021-10-25 09:34:53.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037369: ['FBtr0078724', 'FBtr0301574'] 2021-10-25 09:34:53.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042185: ['FBtr0076970', 'FBtr0076971', 'FBtr0076972', 'FBtr0076973', 'FBtr0076974', 'FBtr0344294', 'FBtr0307510', 'FBtr0307511'] 2021-10-25 09:34:53.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5735097, 5735158)] 2021-10-25 09:34:53.959 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:53.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:53.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004362: ['FBtr0071708', 'FBtr0071709', 'FBtr0301410', 'FBtr0345487'] 2021-10-25 09:34:54.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030039: ['FBtr0071245'] 2021-10-25 09:34:54.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030039 has a single transcript. 2021-10-25 09:34:54.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12387095, 12387381), (12387427, 12388299), (12387427, 12387912), (12387517, 12388299), (12387517, 12387912), (12387939, 12388299), (12388450, 12388517), (12388533, 12388922), (12389086, 12389253)] 2021-10-25 09:34:54.011 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12388517, 12389086, 'FBtr0301372_exon_5') contains intron (12388533, 12388922) 2021-10-25 09:34:54.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301372_exon_5'] 2021-10-25 09:34:54.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037370: ['FBtr0078721'] 2021-10-25 09:34:54.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037370 has a single transcript. 2021-10-25 09:34:54.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030040: ['FBtr0071242', 'FBtr0302500'] 2021-10-25 09:34:54.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037371: ['FBtr0078723'] 2021-10-25 09:34:54.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037371 has a single transcript. 2021-10-25 09:34:54.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037372: ['FBtr0078678'] 2021-10-25 09:34:54.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037372 has a single transcript. 2021-10-25 09:34:54.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037374: ['FBtr0078624', 'FBtr0078625'] 2021-10-25 09:34:54.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21702064, 21715405), (21713387, 21715405), (21713434, 21715405), (21714166, 21715405), (21715617, 21715691)] 2021-10-25 09:34:54.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8459169, 8459223), (8459337, 8460765), (8459382, 8460765)] 2021-10-25 09:34:54.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5779516, 5779799), (5780172, 5780234)] 2021-10-25 09:34:54.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030041: ['FBtr0071240'] 2021-10-25 09:34:54.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030041 has a single transcript. 2021-10-25 09:34:54.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086362: ['FBtr0085760', 'FBtr0330079'] 2021-10-25 09:34:54.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6550836, 6551681), (6550836, 6551763), (6550869, 6562321), (6550869, 6551681), (6550869, 6551763), (6551949, 6562321), (6562418, 6562566), (6562418, 6590603), (6562418, 6590606), (6562418, 6587163), (6562839, 6590603), (6587394, 6590603), (6590835, 6590893), (6590999, 6591058), (6591160, 6591213), (6591417, 6591478)] 2021-10-25 09:34:54.135 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6550738, 6551949, 'FBtr0076972_exon_1') contains intron (6550836, 6551681) 2021-10-25 09:34:54.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076972_exon_1'] 2021-10-25 09:34:54.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030048: ['FBtr0071233', 'FBtr0331727'] 2021-10-25 09:34:54.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037375: ['FBtr0078627', 'FBtr0078628', 'FBtr0300736', 'FBtr0300737', 'FBtr0300738', 'FBtr0300739', 'FBtr0300740', 'FBtr0300741'] 2021-10-25 09:34:54.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31255969, 31256037)] 2021-10-25 09:34:54.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.184 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085760': ['FBtr0330079']} 2021-10-25 09:34:54.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8559363, 8559425), (8559579, 8559652), (8559843, 8559920), (8559858, 8559920)] 2021-10-25 09:34:54.184 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330079']] 2021-10-25 09:34:54.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086365: ['FBtr0084598', 'FBtr0334869'] 2021-10-25 09:34:54.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262734: ['FBtr0343632', 'FBtr0343633', 'FBtr0074279', 'FBtr0074280', 'FBtr0074281'] 2021-10-25 09:34:54.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004363: ['FBtr0080182', 'FBtr0080183', 'FBtr0100584', 'FBtr0305260', 'FBtr0332029'] 2021-10-25 09:34:54.242 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:54.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030049: ['FBtr0071212', 'FBtr0071213', 'FBtr0112963', 'FBtr0112964', 'FBtr0331723', 'FBtr0331724', 'FBtr0331725'] 2021-10-25 09:34:54.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033726: ['FBtr0087955'] 2021-10-25 09:34:54.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033726 has a single transcript. 2021-10-25 09:34:54.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033727: ['FBtr0087918'] 2021-10-25 09:34:54.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033727 has a single transcript. 2021-10-25 09:34:54.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033728: ['FBtr0087920'] 2021-10-25 09:34:54.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033728 has a single transcript. 2021-10-25 09:34:54.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033729: ['FBtr0087921', 'FBtr0345652'] 2021-10-25 09:34:54.310 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16448729, 16449873), (16448729, 16449876), (16449494, 16449876), (16450179, 16450313), (16450501, 16451274), (16450600, 16451274), (16451559, 16451918), (16451559, 16451701), (16451791, 16451918)] 2021-10-25 09:34:54.311 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.311 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086367: ['FBtr0071335', 'FBtr0340327'] 2021-10-25 09:34:54.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10848168, 10848240), (10848468, 10848543), (10848863, 10849030), (10848863, 10850753), (10848863, 10850216), (10848863, 10849515)] 2021-10-25 09:34:54.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5782021, 5785112), (5783530, 5785112), (5785381, 5785441), (5785381, 5785429), (5786067, 5786264), (5786739, 5786794)] 2021-10-25 09:34:54.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12406117, 12406175)] 2021-10-25 09:34:54.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.367 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9218529, 9218587), (9218704, 9218773), (9218894, 9218952), (9219187, 9219252), (9219363, 9221209), (9221313, 9221415), (9221509, 9222939)] 2021-10-25 09:34:54.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.395 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8560813, 8563152), (8560958, 8563152), (8561066, 8563152), (8561191, 8563152), (8561259, 8563152), (8561761, 8563152), (8563547, 8563659), (8564375, 8564483), (8565164, 8565376), (8566056, 8566296)] 2021-10-25 09:34:54.395 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8563152, 8564375, 'FBtr0071212_exon_2') contains intron (8563547, 8563659) 2021-10-25 09:34:54.396 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8563152, 8564375, 'FBtr0071213_exon_2') contains intron (8563547, 8563659) 2021-10-25 09:34:54.396 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8563152, 8564375, 'FBtr0331723_exon_2') contains intron (8563547, 8563659) 2021-10-25 09:34:54.396 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8563152, 8564375, 'FBtr0331724_exon_2') contains intron (8563547, 8563659) 2021-10-25 09:34:54.397 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8563152, 8564375, 'FBtr0331725_exon_2') contains intron (8563547, 8563659) 2021-10-25 09:34:54.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071212_exon_2', 'FBtr0071213_exon_2', 'FBtr0331723_exon_2', 'FBtr0331724_exon_2', 'FBtr0331725_exon_2'] 2021-10-25 09:34:54.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033730: ['FBtr0087922'] 2021-10-25 09:34:54.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033730 has a single transcript. 2021-10-25 09:34:54.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033731: ['FBtr0087924'] 2021-10-25 09:34:54.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033731 has a single transcript. 2021-10-25 09:34:54.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033732: ['FBtr0087925'] 2021-10-25 09:34:54.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033732 has a single transcript. 2021-10-25 09:34:54.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086368: ['FBtr0335403', 'FBtr0070139'] 2021-10-25 09:34:54.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033733: ['FBtr0087954'] 2021-10-25 09:34:54.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033733 has a single transcript. 2021-10-25 09:34:54.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033734: ['FBtr0087926', 'FBtr0303222'] 2021-10-25 09:34:54.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042186: ['FBtr0077805', 'FBtr0335163'] 2021-10-25 09:34:54.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(785014, 785089), (785173, 785233), (785318, 785387), (785492, 785546), (785655, 785716), (786498, 786568), (786809, 786873), (787022, 787085), (787524, 787638)] 2021-10-25 09:34:54.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:54.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.495 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12423228, 12423458), (12424108, 12424165), (12424768, 12424822), (12425074, 12425128)] 2021-10-25 09:34:54.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262736: ['FBtr0086152', 'FBtr0086153', 'FBtr0086150', 'FBtr0086151'] 2021-10-25 09:34:54.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004364: ['FBtr0086309'] 2021-10-25 09:34:54.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004364 has a single transcript. 2021-10-25 09:34:54.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004367: ['FBtr0074271'] 2021-10-25 09:34:54.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004367 has a single transcript. 2021-10-25 09:34:54.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004368: ['FBtr0070724', 'FBtr0070725', 'FBtr0301793', 'FBtr0301794', 'FBtr0301796', 'FBtr0343528', 'FBtr0343529'] 2021-10-25 09:34:54.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042187: ['FBtr0077753'] 2021-10-25 09:34:54.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042187 has a single transcript. 2021-10-25 09:34:54.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086370: ['FBtr0083255', 'FBtr0344473'] 2021-10-25 09:34:54.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042189: ['FBtr0079379', 'FBtr0079380', 'FBtr0344141'] 2021-10-25 09:34:54.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033735: ['FBtr0087927', 'FBtr0346630'] 2021-10-25 09:34:54.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6627674, 6627731), (6627921, 6632026), (6632140, 6632323), (6632140, 6632994), (6632140, 6632305)] 2021-10-25 09:34:54.583 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6632026, 6632384, 'FBtr0086152_exon_1') contains intron (6632140, 6632323) 2021-10-25 09:34:54.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086152_exon_1'] 2021-10-25 09:34:54.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16187299, 16196030), (16195094, 16196030)] 2021-10-25 09:34:54.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.603 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12425762, 12425815), (12426399, 12426461)] 2021-10-25 09:34:54.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.604 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.625 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6800111, 6800488), (6800111, 6800162), (6800315, 6800650), (6800698, 6800752)] 2021-10-25 09:34:54.626 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6800162, 6800698, 'FBtr0344141_exon_2') contains intron (6800315, 6800650) 2021-10-25 09:34:54.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344141_exon_2'] 2021-10-25 09:34:54.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037376: ['FBtr0078669', 'FBtr0078670'] 2021-10-25 09:34:54.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086371: ['FBtr0082772', 'FBtr0303265'] 2021-10-25 09:34:54.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033736: ['FBtr0087953'] 2021-10-25 09:34:54.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033736 has a single transcript. 2021-10-25 09:34:54.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030050: ['FBtr0071232', 'FBtr0331726'] 2021-10-25 09:34:54.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033737: ['FBtr0087952'] 2021-10-25 09:34:54.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033737 has a single transcript. 2021-10-25 09:34:54.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033738: ['FBtr0087950', 'FBtr0087951'] 2021-10-25 09:34:54.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5788117, 5788211), (5788713, 5788765), (5788944, 5789328)] 2021-10-25 09:34:54.691 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4939200, 4940421), (4939304, 4940421), (4939532, 4940421), (4939675, 4940421), (4940847, 4947606), (4947853, 4947918), (4948197, 4948989), (4949668, 4949740), (4950189, 4950470), (4950899, 4950963), (4953107, 4953164), (4953423, 4953492), (4953621, 4954116), (4953621, 4954970), (4953621, 4954134), (4953621, 4953724), (4954624, 4954970)] 2021-10-25 09:34:54.693 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.693 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13362857, 13366759), (13362857, 13364316)] 2021-10-25 09:34:54.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8570744, 8570810)] 2021-10-25 09:34:54.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12432921, 12432978), (12433816, 12434074), (12434406, 12434471), (12435742, 12436469)] 2021-10-25 09:34:54.733 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.733 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042198: ['FBtr0086289'] 2021-10-25 09:34:54.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042198 has a single transcript. 2021-10-25 09:34:54.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262737: ['FBtr0333222', 'FBtr0111017', 'FBtr0304980', 'FBtr0078470', 'FBtr0301364', 'FBtr0304983', 'FBtr0304984', 'FBtr0078468', 'FBtr0304981', 'FBtr0304982', 'FBtr0332736', 'FBtr0346820'] 2021-10-25 09:34:54.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042199: ['FBtr0073346'] 2021-10-25 09:34:54.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042199 has a single transcript. 2021-10-25 09:34:54.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037377: ['FBtr0078630'] 2021-10-25 09:34:54.751 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037377 has a single transcript. 2021-10-25 09:34:54.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042201: ['FBtr0075369'] 2021-10-25 09:34:54.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042201 has a single transcript. 2021-10-25 09:34:54.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037378: ['FBtr0078668'] 2021-10-25 09:34:54.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037378 has a single transcript. 2021-10-25 09:34:54.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042205: ['FBtr0082417'] 2021-10-25 09:34:54.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042205 has a single transcript. 2021-10-25 09:34:54.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037379: ['FBtr0078631', 'FBtr0335518'] 2021-10-25 09:34:54.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042206: ['FBtr0082609', 'FBtr0344264'] 2021-10-25 09:34:54.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086372: ['FBtr0081572', 'FBtr0302183', 'FBtr0302184', 'FBtr0305153', 'FBtr0305154', 'FBtr0305155', 'FBtr0334886', 'FBtr0334887', 'FBtr0334888'] 2021-10-25 09:34:54.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030051: ['FBtr0071230', 'FBtr0071231', 'FBtr0300731', 'FBtr0332628'] 2021-10-25 09:34:54.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033739: ['FBtr0087930', 'FBtr0087929', 'FBtr0100298', 'FBtr0113074', 'FBtr0308613', 'FBtr0305076', 'FBtr0305077'] 2021-10-25 09:34:54.823 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12365582, 12365690), (12365606, 12365690)] 2021-10-25 09:34:54.824 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5795040, 5795148), (5795295, 5795377), (5795840, 5795910), (5796058, 5796428)] 2021-10-25 09:34:54.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.864 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8571968, 8572090), (8572307, 8572458), (8572713, 8572827), (8572999, 8573561), (8572999, 8573512), (8572999, 8573528)] 2021-10-25 09:34:54.865 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.865 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042207: ['FBtr0082644'] 2021-10-25 09:34:54.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042207 has a single transcript. 2021-10-25 09:34:54.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037382: ['FBtr0078667'] 2021-10-25 09:34:54.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037382 has a single transcript. 2021-10-25 09:34:54.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042213: ['FBtr0085459', 'FBtr0339716'] 2021-10-25 09:34:54.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037383: ['FBtr0344117', 'FBtr0078666'] 2021-10-25 09:34:54.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29725173, 29725237), (29725173, 29725222)] 2021-10-25 09:34:54.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5824307, 5824360)] 2021-10-25 09:34:54.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.973 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12437409, 12447758), (12437571, 12447758), (12437890, 12447758), (12448100, 12448162), (12448248, 12448311), (12449138, 12449199), (12449782, 12450068), (12449782, 12451974), (12449782, 12450913), (12449782, 12451668), (12450236, 12451668), (12450236, 12450520), (12450595, 12450913), (12451712, 12451974)] 2021-10-25 09:34:54.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7187547, 7190123), (7190266, 7190720), (7190796, 7191388), (7190796, 7191131), (7191164, 7191388), (7191491, 7191556), (7191678, 7191735), (7191929, 7191994), (7192131, 7192491), (7192131, 7192539), (7192654, 7192720), (7192970, 7198327), (7192970, 7193592), (7193012, 7193592), (7193688, 7195615), (7193688, 7195693), (7193688, 7194197), (7194458, 7195615), (7194458, 7195693), (7195895, 7196293), (7196393, 7198327), (7196393, 7197569), (7197659, 7198327)] 2021-10-25 09:34:54.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:54.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:54.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042627: ['FBtr0077657', 'FBtr0335386'] 2021-10-25 09:34:54.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037384: ['FBtr0344116', 'FBtr0078638', 'FBtr0078639'] 2021-10-25 09:34:55.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004369: ['FBtr0085422', 'FBtr0085424', 'FBtr0085423', 'FBtr0303148', 'FBtr0303454'] 2021-10-25 09:34:55.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030052: ['FBtr0071214', 'FBtr0071215', 'FBtr0071216', 'FBtr0071217', 'FBtr0300750', 'FBtr0300751'] 2021-10-25 09:34:55.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3044160, 3045653), (3045883, 3046949), (3048427, 3049391), (3054620, 3054687), (3054623, 3054687), (3054783, 3055169), (3055313, 3055376)] 2021-10-25 09:34:55.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21845235, 21875296), (21875325, 21907345), (21879941, 21888633), (21879941, 21907345), (21888692, 21907345), (21907920, 21914775), (21914832, 21914892), (21915009, 21915101), (21915009, 21915113), (21915195, 21915260), (21915424, 21915535), (21915655, 21920902), (21915655, 21918335), (21918476, 21920902), (21920987, 21921041), (21920987, 21921053), (21920987, 21921056), (21920987, 21921092), (21921327, 21925179), (21921327, 21922578)] 2021-10-25 09:34:55.037 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21920902, 21921327, 'FBtr0304980_exon_9') contains intron (21920987, 21921041) 2021-10-25 09:34:55.037 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21920902, 21921327, 'FBtr0301364_exon_8') contains intron (21920987, 21921041) 2021-10-25 09:34:55.038 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21920902, 21921327, 'FBtr0078468_exon_8') contains intron (21920987, 21921041) 2021-10-25 09:34:55.039 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21920902, 21921327, 'FBtr0304982_exon_10') contains intron (21920987, 21921041) 2021-10-25 09:34:55.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304980_exon_9', 'FBtr0301364_exon_8', 'FBtr0078468_exon_8', 'FBtr0304982_exon_10'] 2021-10-25 09:34:55.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5824975, 5825032), (5824975, 5825035), (5824975, 5825056), (5825444, 5825498), (5825588, 5825804)] 2021-10-25 09:34:55.066 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042630: ['FBtr0075747', 'FBtr0330115', 'FBtr0330116'] 2021-10-25 09:34:55.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29378024, 29382955), (29383391, 29416955), (29417125, 29419307), (29419434, 29419854), (29419978, 29424431), (29424613, 29426902), (29427090, 29431125), (29431240, 29471650), (29457641, 29461812), (29462575, 29471650), (29471854, 29473159), (29471899, 29473159), (29473440, 29474731), (29474848, 29476263), (29476403, 29481466), (29479825, 29481469), (29481756, 29481867), (29482208, 29482273), (29482440, 29482516), (29483072, 29483129), (29483398, 29483468), (29483743, 29483956)] 2021-10-25 09:34:55.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29483468, 29484739, 'FBtr0085423_exon_11') contains intron (29483743, 29483956) 2021-10-25 09:34:55.124 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29483468, 29487131, 'FBtr0303454_exon_7') contains intron (29483743, 29483956) 2021-10-25 09:34:55.124 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085423_exon_11', 'FBtr0303454_exon_7'] 2021-10-25 09:34:55.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8574407, 8583540), (8574407, 8575347), (8574407, 8575350), (8574407, 8575353), (8575490, 8583540), (8584255, 8584455), (8584575, 8584842), (8584575, 8585809), (8584923, 8585809), (8585918, 8585985), (8586245, 8586551), (8586245, 8587257), (8586608, 8587257), (8587525, 8587587)] 2021-10-25 09:34:55.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.153 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14113602, 14116265), (14116360, 14118444), (14118572, 14118630), (14118697, 14125085), (14125249, 14125389), (14126198, 14130557), (14126198, 14131137)] 2021-10-25 09:34:55.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.167 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330115': ['FBtr0330116']} 2021-10-25 09:34:55.167 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330116']] 2021-10-25 09:34:55.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037385: ['FBtr0078640'] 2021-10-25 09:34:55.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037385 has a single transcript. 2021-10-25 09:34:55.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037386: ['FBtr0113196', 'FBtr0113197'] 2021-10-25 09:34:55.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042641: ['FBtr0075228', 'FBtr0299820'] 2021-10-25 09:34:55.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5831851, 5835838), (5835351, 5835838), (5835947, 5836010), (5836169, 5836856), (5837042, 5837096), (5837341, 5837518)] 2021-10-25 09:34:55.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17429303, 17429376), (17429600, 17429854), (17430059, 17430116)] 2021-10-25 09:34:55.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033740: ['FBtr0087948', 'FBtr0339638'] 2021-10-25 09:34:55.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037387: ['FBtr0078643', 'FBtr0078644', 'FBtr0078642', 'FBtr0305954'] 2021-10-25 09:34:55.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004370: ['FBtr0073522', 'FBtr0273235', 'FBtr0330392', 'FBtr0330393', 'FBtr0330394', 'FBtr0331406'] 2021-10-25 09:34:55.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12466024, 12466090), (12466278, 12466344), (12467569, 12467632), (12467910, 12467977), (12468192, 12471728)] 2021-10-25 09:34:55.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042693: ['FBtr0083553', 'FBtr0083554', 'FBtr0083555', 'FBtr0083556', 'FBtr0083552', 'FBtr0290319', 'FBtr0290320', 'FBtr0290321', 'FBtr0305032', 'FBtr0305033', 'FBtr0305034', 'FBtr0306646', 'FBtr0336466', 'FBtr0336467'] 2021-10-25 09:34:55.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086378: ['FBtr0301810'] 2021-10-25 09:34:55.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086378 has a single transcript. 2021-10-25 09:34:55.380 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5841370, 5844530), (5841663, 5844530), (5843979, 5844530), (5844080, 5844530), (5844703, 5845008), (5845422, 5845494)] 2021-10-25 09:34:55.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086384: ['FBtr0074754', 'FBtr0345992'] 2021-10-25 09:34:55.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030053: ['FBtr0071218', 'FBtr0332626'] 2021-10-25 09:34:55.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033741: ['FBtr0087934'] 2021-10-25 09:34:55.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033741 has a single transcript. 2021-10-25 09:34:55.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033742: ['FBtr0087935'] 2021-10-25 09:34:55.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033742 has a single transcript. 2021-10-25 09:34:55.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033744: ['FBtr0087936', 'FBtr0113075'] 2021-10-25 09:34:55.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:55.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19691635, 19691697), (19691934, 19692031), (19692241, 19692300), (19693249, 19693435)] 2021-10-25 09:34:55.431 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12474821, 12480774), (12481173, 12484538), (12484656, 12484708), (12484910, 12484965), (12485062, 12485116), (12485210, 12485268), (12485429, 12485490), (12485601, 12485667), (12485853, 12485913), (12486038, 12486259), (12486038, 12486808), (12486310, 12486585)] 2021-10-25 09:34:55.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11622185, 11623752), (11622185, 11622312), (11622185, 11623829), (11622357, 11623829), (11622357, 11623752), (11624216, 11664729), (11664979, 11666697), (11666979, 11668238), (11666979, 11667196), (11667244, 11668238), (11668911, 11668983), (11669408, 11669468), (11669900, 11670416), (11671814, 11672249), (11671814, 11672029), (11672047, 11672249), (11672932, 11673011), (11673270, 11673332), (11673461, 11675330), (11673461, 11673730), (11674902, 11675330), (11675026, 11675330)] 2021-10-25 09:34:55.465 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11622014, 11622357, 'FBtr0273235_exon_1') contains intron (11622185, 11622312) 2021-10-25 09:34:55.466 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11622014, 11622357, 'FBtr0330393_exon_1') contains intron (11622185, 11622312) 2021-10-25 09:34:55.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273235_exon_1', 'FBtr0330393_exon_1'] 2021-10-25 09:34:55.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030054: ['FBtr0071228'] 2021-10-25 09:34:55.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030054 has a single transcript. 2021-10-25 09:34:55.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030055: ['FBtr0071221', 'FBtr0331728'] 2021-10-25 09:34:55.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086408: ['FBtr0113110', 'FBtr0309857'] 2021-10-25 09:34:55.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033748: ['FBtr0087944', 'FBtr0087945'] 2021-10-25 09:34:55.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037388: ['FBtr0078645'] 2021-10-25 09:34:55.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037388 has a single transcript. 2021-10-25 09:34:55.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037389: ['FBtr0306740', 'FBtr0306741'] 2021-10-25 09:34:55.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8677464, 8677890), (8679767, 8679835), (8679989, 8680067)] 2021-10-25 09:34:55.533 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.533 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22808955, 22811433), (22811512, 22812059), (22812203, 22812302), (22812538, 22812710), (22813549, 22813600), (22813729, 22813786), (22814036, 22814096), (22814892, 22814949), (22815633, 22815687)] 2021-10-25 09:34:55.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12508387, 12508465), (12508645, 12508711), (12508833, 12508892), (12508994, 12509570), (12508994, 12509083), (12509470, 12509570), (12509719, 12509865), (12509719, 12509778), (12510266, 12510324), (12510456, 12510539)] 2021-10-25 09:34:55.558 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12510324, 12510615, 'FBtr0087945_exon_1') contains intron (12510456, 12510539) 2021-10-25 09:34:55.558 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087945_exon_1'] 2021-10-25 09:34:55.558 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5849128, 5849273)] 2021-10-25 09:34:55.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262738: ['FBtr0343599', 'FBtr0100671', 'FBtr0100670', 'FBtr0070651', 'FBtr0070650', 'FBtr0301475'] 2021-10-25 09:34:55.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030056: ['FBtr0071222', 'FBtr0331729', 'FBtr0331730', 'FBtr0331731', 'FBtr0345984'] 2021-10-25 09:34:55.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033749: ['FBtr0087942', 'FBtr0087943', 'FBtr0339635'] 2021-10-25 09:34:55.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037391: ['FBtr0078661', 'FBtr0078662', 'FBtr0078663', 'FBtr0078664', 'FBtr0114518'] 2021-10-25 09:34:55.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086442: ['FBtr0081142', 'FBtr0336840', 'FBtr0336841'] 2021-10-25 09:34:55.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18167867, 18175332), (18167867, 18169483), (18167867, 18169656), (18168206, 18169483), (18168206, 18169656), (18169121, 18169483), (18170098, 18171273), (18170098, 18171528), (18171312, 18171528), (18171703, 18175332), (18172949, 18173125), (18174190, 18174539), (18175044, 18175332), (18175529, 18175602), (18175937, 18176003), (18176234, 18176306), (18176699, 18176804), (18177048, 18178605), (18177048, 18177902)] 2021-10-25 09:34:55.681 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18168440, 18170098, 'FBtr0306646_exon_1') contains intron (18169121, 18169483) 2021-10-25 09:34:55.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306646_exon_1'] 2021-10-25 09:34:55.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19035000, 19035760), (19035697, 19035760), (19035865, 19037803), (19037971, 19038084), (19038754, 19038815), (19038978, 19039040)] 2021-10-25 09:34:55.700 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12512189, 12512254), (12512434, 12512500), (12512622, 12512681), (12512783, 12513359), (12512783, 12512872), (12513259, 12513359), (12513508, 12513567), (12514061, 12514129), (12514261, 12514775), (12514261, 12514343)] 2021-10-25 09:34:55.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004372: ['FBtr0073006', 'FBtr0332086'] 2021-10-25 09:34:55.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8681828, 8687231), (8681828, 8686694), (8685790, 8686694), (8686634, 8686694), (8687054, 8687231), (8687742, 8687817), (8687954, 8688036)] 2021-10-25 09:34:55.717 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.720 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4323155, 4332795), (4323155, 4325347), (4323801, 4332795), (4325616, 4332795), (4332840, 4349003), (4348030, 4349003), (4349587, 4349652), (4349712, 4353466), (4353613, 4354470), (4353613, 4353943), (4354023, 4357039), (4354550, 4357039), (4357276, 4357344), (4357511, 4357575), (4357880, 4358275), (4358440, 4358504), (4358871, 4359066), (4360330, 4360394), (4360551, 4360615), (4360705, 4361965)] 2021-10-25 09:34:55.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5858584, 5858642), (5859520, 5859731), (5860404, 5861206), (5860404, 5862169), (5860404, 5860989), (5860404, 5862370), (5860404, 5861746)] 2021-10-25 09:34:55.745 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3025921, 3025984), (3026260, 3026323)] 2021-10-25 09:34:55.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033750: ['FBtr0087939'] 2021-10-25 09:34:55.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033750 has a single transcript. 2021-10-25 09:34:55.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086443: ['FBtr0081162', 'FBtr0332578'] 2021-10-25 09:34:55.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033751: ['FBtr0087941'] 2021-10-25 09:34:55.817 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033751 has a single transcript. 2021-10-25 09:34:55.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004373: ['FBtr0072515', 'FBtr0072516', 'FBtr0072517', 'FBtr0332841'] 2021-10-25 09:34:55.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033752: ['FBtr0087940'] 2021-10-25 09:34:55.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033752 has a single transcript. 2021-10-25 09:34:55.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033753: ['FBtr0087824'] 2021-10-25 09:34:55.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033753 has a single transcript. 2021-10-25 09:34:55.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033754: ['FBtr0087891'] 2021-10-25 09:34:55.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033754 has a single transcript. 2021-10-25 09:34:55.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033755: ['FBtr0087826'] 2021-10-25 09:34:55.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033755 has a single transcript. 2021-10-25 09:34:55.857 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19131685, 19131796)] 2021-10-25 09:34:55.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033756: ['FBtr0110824'] 2021-10-25 09:34:55.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033756 has a single transcript. 2021-10-25 09:34:55.857 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.858 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033757: ['FBtr0087885', 'FBtr0087886', 'FBtr0333103'] 2021-10-25 09:34:55.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030057: ['FBtr0071225', 'FBtr0345985'] 2021-10-25 09:34:55.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(306546, 306604), (306769, 306828), (306917, 306981), (307256, 307318), (307456, 307511), (307630, 307694), (310178, 310276), (310465, 310524), (310786, 311173), (311285, 311381), (311285, 313023), (314317, 319746), (314317, 318990), (319513, 319746)] 2021-10-25 09:34:55.911 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (318990, 319884, 'FBtr0072516_exon_1') contains intron (319513, 319746) 2021-10-25 09:34:55.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072516_exon_1'] 2021-10-25 09:34:55.912 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086444: ['FBtr0081163'] 2021-10-25 09:34:55.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086444 has a single transcript. 2021-10-25 09:34:55.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037395: ['FBtr0078648', 'FBtr0309318'] 2021-10-25 09:34:55.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086445: ['FBtr0081156'] 2021-10-25 09:34:55.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086445 has a single transcript. 2021-10-25 09:34:55.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086446: ['FBtr0081157'] 2021-10-25 09:34:55.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086446 has a single transcript. 2021-10-25 09:34:55.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12629272, 12629327), (12629457, 12629519), (12629676, 12629728), (12630048, 12630101), (12630320, 12630383), (12630780, 12630843), (12630985, 12631041), (12631180, 12631262), (12631605, 12631667), (12631880, 12631962), (12632178, 12632241)] 2021-10-25 09:34:55.938 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12630383, 12630985, 'FBtr0087885_exon_6') contains intron (12630780, 12630843) 2021-10-25 09:34:55.938 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12630383, 12630985, 'FBtr0087886_exon_5') contains intron (12630780, 12630843) 2021-10-25 09:34:55.938 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12631962, 12632281, 'FBtr0087886_exon_1') contains intron (12632178, 12632241) 2021-10-25 09:34:55.939 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12631962, 12632281, 'FBtr0333103_exon_1') contains intron (12632178, 12632241) 2021-10-25 09:34:55.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087885_exon_6', 'FBtr0087886_exon_5', 'FBtr0087886_exon_1', 'FBtr0333103_exon_1'] 2021-10-25 09:34:55.939 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8688902, 8688961), (8689088, 8689144), (8689294, 8689434), (8690018, 8690078)] 2021-10-25 09:34:55.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086447: ['FBtr0081161', 'FBtr0332577', 'FBtr0336628'] 2021-10-25 09:34:55.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262739: ['FBtr0087612', 'FBtr0087614', 'FBtr0087613', 'FBtr0305592'] 2021-10-25 09:34:55.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6011378, 6011667), (6011396, 6011667)] 2021-10-25 09:34:55.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:55.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:55.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030058: ['FBtr0071224', 'FBtr0331456'] 2021-10-25 09:34:56.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19133351, 19134929), (19133351, 19133773), (19133351, 19133408), (19133821, 19134929)] 2021-10-25 09:34:56.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037396: ['FBtr0078623', 'FBtr0344315'] 2021-10-25 09:34:56.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8692746, 8693256)] 2021-10-25 09:34:56.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004374: ['FBtr0081332'] 2021-10-25 09:34:56.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004374 has a single transcript. 2021-10-25 09:34:56.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033760: ['FBtr0087882', 'FBtr0087881'] 2021-10-25 09:34:56.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13948110, 13948176), (13949787, 13949849), (13950072, 13950131), (13950917, 13951613), (13951688, 13953048), (13951688, 13954686), (13953275, 13953911), (13954849, 13955631), (13954849, 13957172), (13957350, 13957961)] 2021-10-25 09:34:56.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004378: ['FBtr0072733'] 2021-10-25 09:34:56.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004378 has a single transcript. 2021-10-25 09:34:56.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004379: ['FBtr0076499', 'FBtr0346530', 'FBtr0333886'] 2021-10-25 09:34:56.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030060: ['FBtr0071281', 'FBtr0332957', 'FBtr0332958', 'FBtr0332960', 'FBtr0346167'] 2021-10-25 09:34:56.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12641983, 12642039), (12642161, 12643152), (12643384, 12643876), (12643986, 12647875), (12643986, 12645059)] 2021-10-25 09:34:56.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086448: ['FBtr0307175', 'FBtr0340312'] 2021-10-25 09:34:56.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037397: ['FBtr0307114'] 2021-10-25 09:34:56.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037397 has a single transcript. 2021-10-25 09:34:56.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9363034, 9363094), (9363226, 9363372), (9363318, 9363372), (9364192, 9365336), (9366417, 9366484)] 2021-10-25 09:34:56.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037398: ['FBtr0078621'] 2021-10-25 09:34:56.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037398 has a single transcript. 2021-10-25 09:34:56.141 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.141 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037399: ['FBtr0078620'] 2021-10-25 09:34:56.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037399 has a single transcript. 2021-10-25 09:34:56.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037402: ['FBtr0078585', 'FBtr0309511', 'FBtr0309512'] 2021-10-25 09:34:56.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16359986, 16360049), (16360158, 16360222), (16360358, 16360419), (16360564, 16360619), (16360696, 16360762), (16360878, 16360931), (16361046, 16361113)] 2021-10-25 09:34:56.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033761: ['FBtr0087880'] 2021-10-25 09:34:56.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033761 has a single transcript. 2021-10-25 09:34:56.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033762: ['FBtr0087844', 'FBtr0087845'] 2021-10-25 09:34:56.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8713405, 8713598), (8714116, 8714475), (8714135, 8714475), (8714135, 8714405)] 2021-10-25 09:34:56.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262740: ['FBtr0332620', 'FBtr0300733', 'FBtr0300732', 'FBtr0073547', 'FBtr0073546'] 2021-10-25 09:34:56.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6122710, 6122772), (6122854, 6122933), (6122854, 6122973), (6123179, 6123237)] 2021-10-25 09:34:56.224 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6122591, 6122854, 'FBtr0078585_exon_1') contains intron (6122710, 6122772) 2021-10-25 09:34:56.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078585_exon_1'] 2021-10-25 09:34:56.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12653127, 12653181), (12654058, 12654110), (12654058, 12654125), (12654252, 12654309), (12654716, 12654767), (12655096, 12655148), (12655223, 12655283), (12655397, 12655461)] 2021-10-25 09:34:56.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086450: ['FBtr0071338'] 2021-10-25 09:34:56.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086450 has a single transcript. 2021-10-25 09:34:56.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086451: ['FBtr0079343'] 2021-10-25 09:34:56.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086451 has a single transcript. 2021-10-25 09:34:56.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004380: ['FBtr0077157'] 2021-10-25 09:34:56.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004380 has a single transcript. 2021-10-25 09:34:56.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086472: ['FBtr0082369', 'FBtr0082370'] 2021-10-25 09:34:56.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042696: ['FBtr0089141', 'FBtr0333678'] 2021-10-25 09:34:56.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004381: ['FBtr0076030', 'FBtr0332129'] 2021-10-25 09:34:56.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033763: ['FBtr0301237'] 2021-10-25 09:34:56.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033763 has a single transcript. 2021-10-25 09:34:56.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033766: ['FBtr0302596', 'FBtr0306684'] 2021-10-25 09:34:56.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11215369, 11215422), (11215624, 11215692), (11215969, 11216258)] 2021-10-25 09:34:56.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(270499, 270559), (270755, 271068), (271847, 271914), (272160, 272225), (272172, 272225), (272408, 273114), (273712, 273760), (273916, 275579), (275719, 276290)] 2021-10-25 09:34:56.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11795671, 11795857), (11795698, 11795857), (11796621, 11796726)] 2021-10-25 09:34:56.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037405: ['FBtr0078587'] 2021-10-25 09:34:56.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037405 has a single transcript. 2021-10-25 09:34:56.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037406: ['FBtr0078588'] 2021-10-25 09:34:56.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037406 has a single transcript. 2021-10-25 09:34:56.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11433417, 11435382), (11433417, 11434499), (11434814, 11435382), (11435481, 11435548), (11435666, 11435728), (11436396, 11437022), (11436396, 11436774), (11436792, 11437022), (11437137, 11437203), (11438239, 11438662), (11439106, 11453795)] 2021-10-25 09:34:56.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12680866, 12680926), (12681140, 12681197), (12681352, 12681413), (12682709, 12682790), (12683484, 12683540), (12684505, 12684564), (12684674, 12684746), (12685984, 12686046)] 2021-10-25 09:34:56.344 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12681413, 12683484, 'FBtr0306684_exon_5') contains intron (12682709, 12682790) 2021-10-25 09:34:56.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306684_exon_5'] 2021-10-25 09:34:56.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037408: ['FBtr0078590', 'FBtr0308316', 'FBtr0308317', 'FBtr0308318'] 2021-10-25 09:34:56.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086519: ['FBtr0088183'] 2021-10-25 09:34:56.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086519 has a single transcript. 2021-10-25 09:34:56.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042701: ['FBtr0085952'] 2021-10-25 09:34:56.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042701 has a single transcript. 2021-10-25 09:34:56.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086532: ['FBtr0087729', 'FBtr0087730', 'FBtr0087731'] 2021-10-25 09:34:56.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042710: ['FBtr0085011'] 2021-10-25 09:34:56.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042710 has a single transcript. 2021-10-25 09:34:56.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004387: ['FBtr0085211', 'FBtr0304671'] 2021-10-25 09:34:56.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042711: ['FBtr0085010'] 2021-10-25 09:34:56.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0042711 has a single transcript. 2021-10-25 09:34:56.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0042712: ['FBtr0072866', 'FBtr0345807'] 2021-10-25 09:34:56.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030061: ['FBtr0071250'] 2021-10-25 09:34:56.400 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030061 has a single transcript. 2021-10-25 09:34:56.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033767: ['FBtr0087847', 'FBtr0087848', 'FBtr0331975', 'FBtr0331976'] 2021-10-25 09:34:56.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030063: ['FBtr0071251'] 2021-10-25 09:34:56.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030063 has a single transcript. 2021-10-25 09:34:56.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030065: ['FBtr0071253', 'FBtr0071254', 'FBtr0307271', 'FBtr0335034', 'FBtr0335035'] 2021-10-25 09:34:56.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27548976, 27549036), (27549212, 27549268), (27550313, 27550367), (27550481, 27550584), (27550481, 27550872), (27550707, 27550872), (27551046, 27551113), (27551845, 27551908), (27552344, 27552546), (27552716, 27552780), (27553094, 27555367), (27555591, 27558325)] 2021-10-25 09:34:56.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13168570, 13168814), (13168600, 13168814), (13168888, 13168950), (13169450, 13169506), (13169834, 13169889), (13170255, 13170316)] 2021-10-25 09:34:56.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6187605, 6188986), (6189200, 6192022), (6192413, 6192475), (6192645, 6193255), (6193832, 6193901), (6194145, 6194857), (6194177, 6194857)] 2021-10-25 09:34:56.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.438 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6193255, 6195403, 'FBtr0078590_exon_5') contains intron (6193832, 6193901) 2021-10-25 09:34:56.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.439 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6193255, 6194145, 'FBtr0308318_exon_5') contains intron (6193832, 6193901) 2021-10-25 09:34:56.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078590_exon_5', 'FBtr0308318_exon_5'] 2021-10-25 09:34:56.439 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004389: ['FBtr0085754'] 2021-10-25 09:34:56.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004389 has a single transcript. 2021-10-25 09:34:56.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043001: ['FBtr0073642', 'FBtr0339625'] 2021-10-25 09:34:56.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12686317, 12686786), (12686911, 12686969), (12687079, 12687596), (12687780, 12687838)] 2021-10-25 09:34:56.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12686608, 12687079, 'FBtr0087848_exon_1') contains intron (12686911, 12686969) 2021-10-25 09:34:56.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12686786, 12687079, 'FBtr0331975_exon_2') contains intron (12686911, 12686969) 2021-10-25 09:34:56.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12686908, 12687079, 'FBtr0331976_exon_1') contains intron (12686911, 12686969) 2021-10-25 09:34:56.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087848_exon_1', 'FBtr0331975_exon_2', 'FBtr0331976_exon_1'] 2021-10-25 09:34:56.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004390: ['FBtr0076367', 'FBtr0076368', 'FBtr0330168'] 2021-10-25 09:34:56.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8838484, 8867548), (8854176, 8867548), (8864258, 8867548), (8864273, 8867548), (8867858, 8867997), (8868224, 8869249), (8868224, 8869213), (8869908, 8869976)] 2021-10-25 09:34:56.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.523 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262741: ['FBtr0309075', 'FBtr0305123'] 2021-10-25 09:34:56.544 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086533: ['FBtr0309750'] 2021-10-25 09:34:56.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086533 has a single transcript. 2021-10-25 09:34:56.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086558: ['FBtr0070933', 'FBtr0345892'] 2021-10-25 09:34:56.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037409: ['FBtr0078591'] 2021-10-25 09:34:56.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037409 has a single transcript. 2021-10-25 09:34:56.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037410: ['FBtr0078592', 'FBtr0078593', 'FBtr0310413'] 2021-10-25 09:34:56.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9841563, 9842467), (9842663, 9843231), (9843491, 9843553), (9845439, 9854664)] 2021-10-25 09:34:56.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.595 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076367': ['FBtr0330168']} 2021-10-25 09:34:56.596 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330168']] 2021-10-25 09:34:56.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043002: ['FBtr0100268'] 2021-10-25 09:34:56.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043002 has a single transcript. 2021-10-25 09:34:56.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6278753, 6279135)] 2021-10-25 09:34:56.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043005: ['FBtr0113347'] 2021-10-25 09:34:56.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043005 has a single transcript. 2021-10-25 09:34:56.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043010: ['FBtr0087763', 'FBtr0087762'] 2021-10-25 09:34:56.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262743: ['FBtr0305586', 'FBtr0081392', 'FBtr0305584', 'FBtr0305585', 'FBtr0305587'] 2021-10-25 09:34:56.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033769: ['FBtr0087871'] 2021-10-25 09:34:56.648 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033769 has a single transcript. 2021-10-25 09:34:56.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6209476, 6211459), (6211160, 6211459), (6211375, 6211459), (6211814, 6212092), (6212239, 6212388), (6212528, 6212848)] 2021-10-25 09:34:56.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.653 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004391: ['FBtr0074077'] 2021-10-25 09:34:56.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004391 has a single transcript. 2021-10-25 09:34:56.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033770: ['FBtr0087849', 'FBtr0113076'] 2021-10-25 09:34:56.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13221376, 13221439), (13221804, 13221861), (13222229, 13222343)] 2021-10-25 09:34:56.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086600: ['FBtr0091610'] 2021-10-25 09:34:56.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086600 has a single transcript. 2021-10-25 09:34:56.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004394: ['FBtr0080392', 'FBtr0080393', 'FBtr0340539', 'FBtr0340540'] 2021-10-25 09:34:56.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086601: ['FBtr0091754'] 2021-10-25 09:34:56.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086601 has a single transcript. 2021-10-25 09:34:56.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086602: ['FBtr0091803'] 2021-10-25 09:34:56.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086602 has a single transcript. 2021-10-25 09:34:56.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086603: ['FBtr0091613'] 2021-10-25 09:34:56.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086603 has a single transcript. 2021-10-25 09:34:56.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12700212, 12700296), (12700562, 12700618)] 2021-10-25 09:34:56.705 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12700080, 12700562, 'FBtr0113076_exon_1') contains intron (12700212, 12700296) 2021-10-25 09:34:56.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113076_exon_1'] 2021-10-25 09:34:56.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086604: ['FBtr0112774', 'FBtr0112775', 'FBtr0273284', 'FBtr0342690'] 2021-10-25 09:34:56.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043012: ['FBtr0084103'] 2021-10-25 09:34:56.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043012 has a single transcript. 2021-10-25 09:34:56.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043021: ['FBtr0081294'] 2021-10-25 09:34:56.722 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043021 has a single transcript. 2021-10-25 09:34:56.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030066: ['FBtr0071268', 'FBtr0333606'] 2021-10-25 09:34:56.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043022: ['FBtr0081315'] 2021-10-25 09:34:56.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043022 has a single transcript. 2021-10-25 09:34:56.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043025: ['FBtr0075192', 'FBtr0110846', 'FBtr0110847'] 2021-10-25 09:34:56.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12658073, 12660251), (12660931, 12672783), (12673647, 12680776), (12678941, 12680776), (12680833, 12684530)] 2021-10-25 09:34:56.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.757 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20734729, 20734928), (20735090, 20735252), (20735169, 20735252), (20735430, 20736102), (20736344, 20736417), (20737446, 20737514), (20738441, 20738503), (20738975, 20739191), (20738975, 20749270), (20740063, 20749270), (20740298, 20748119), (20749388, 20749527)] 2021-10-25 09:34:56.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20749270, 20750941, 'FBtr0305585_exon_8') contains intron (20749388, 20749527) 2021-10-25 09:34:56.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037411: ['FBtr0078594', 'FBtr0310414'] 2021-10-25 09:34:56.760 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20749270, 20750941, 'FBtr0305587_exon_7') contains intron (20749388, 20749527) 2021-10-25 09:34:56.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305585_exon_8', 'FBtr0305587_exon_7'] 2021-10-25 09:34:56.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033773: ['FBtr0087865'] 2021-10-25 09:34:56.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033773 has a single transcript. 2021-10-25 09:34:56.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033774: ['FBtr0087854'] 2021-10-25 09:34:56.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033774 has a single transcript. 2021-10-25 09:34:56.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033775: ['FBtr0087820'] 2021-10-25 09:34:56.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033775 has a single transcript. 2021-10-25 09:34:56.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033777: ['FBtr0087816', 'FBtr0344926', 'FBtr0306579', 'FBtr0306580', 'FBtr0306581', 'FBtr0306582', 'FBtr0306583', 'FBtr0331979', 'FBtr0337029'] 2021-10-25 09:34:56.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20424656, 20429403), (20429776, 20459487), (20429776, 20431842), (20431863, 20459487), (20459620, 20462003), (20462209, 20463859), (20463973, 20464618), (20464828, 20464925), (20465077, 20465646), (20465791, 20466808), (20466939, 20467617), (20467777, 20468207), (20468422, 20468798), (20468880, 20469465), (20469625, 20469983), (20470120, 20470413), (20470120, 20471540), (20470578, 20471540), (20471975, 20472073), (20471984, 20472073), (20472333, 20473760), (20474045, 20475909), (20476251, 20477883)] 2021-10-25 09:34:56.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.802 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6216153, 6216642), (6216818, 6217316)] 2021-10-25 09:34:56.803 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.803 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.803 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17755573, 17755632), (17755815, 17755943), (17756819, 17764061), (17756825, 17764061)] 2021-10-25 09:34:56.804 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030067: ['FBtr0071255', 'FBtr0346163'] 2021-10-25 09:34:56.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037412: ['FBtr0078615', 'FBtr0334866'] 2021-10-25 09:34:56.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8901812, 8901879), (8901926, 8901997), (8902811, 8903201)] 2021-10-25 09:34:56.859 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.859 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6218600, 6219615), (6218600, 6219621), (6219929, 6220219), (6220553, 6221190)] 2021-10-25 09:34:56.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.911 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004395: ['FBtr0084402', 'FBtr0084403', 'FBtr0305571', 'FBtr0305572', 'FBtr0305573', 'FBtr0347570', 'FBtr0337052'] 2021-10-25 09:34:56.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043043: ['FBtr0082592'] 2021-10-25 09:34:56.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043043 has a single transcript. 2021-10-25 09:34:56.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030071: ['FBtr0071265', 'FBtr0333603'] 2021-10-25 09:34:56.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043069: ['FBtr0083367', 'FBtr0337059'] 2021-10-25 09:34:56.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086605: ['FBtr0078949', 'FBtr0113192', 'FBtr0344215'] 2021-10-25 09:34:56.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037413: ['FBtr0078595', 'FBtr0302937'] 2021-10-25 09:34:56.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262782: ['FBtr0080050', 'FBtr0345435'] 2021-10-25 09:34:56.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16988968, 16989022), (16989454, 16989518)] 2021-10-25 09:34:56.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:56.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:56.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:56.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12849896, 12849960), (12850038, 12850098), (12850041, 12850098), (12850228, 12856654), (12850228, 12868942), (12850228, 12850774), (12850228, 12853322), (12850228, 12857822), (12850228, 12851447), (12850228, 12855082), (12850228, 12861749), (12869083, 12869149)] 2021-10-25 09:34:57.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6228024, 6228452), (6228024, 6228449)] 2021-10-25 09:34:57.012 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10394944, 10396214)] 2021-10-25 09:34:57.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4399385, 4399445), (4399680, 4399741), (4400190, 4401721)] 2021-10-25 09:34:57.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030073: ['FBtr0071263'] 2021-10-25 09:34:57.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030073 has a single transcript. 2021-10-25 09:34:57.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030074: ['FBtr0071264'] 2021-10-25 09:34:57.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030074 has a single transcript. 2021-10-25 09:34:57.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043070: ['FBtr0089708', 'FBtr0089709', 'FBtr0089706', 'FBtr0089704', 'FBtr0089703', 'FBtr0089711', 'FBtr0089707', 'FBtr0089705', 'FBtr0089710'] 2021-10-25 09:34:57.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030077: ['FBtr0071357', 'FBtr0339679', 'FBtr0339680'] 2021-10-25 09:34:57.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037414: ['FBtr0078597'] 2021-10-25 09:34:57.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037414 has a single transcript. 2021-10-25 09:34:57.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262786: ['FBtr0305896'] 2021-10-25 09:34:57.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262786 has a single transcript. 2021-10-25 09:34:57.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037415: ['FBtr0078598'] 2021-10-25 09:34:57.075 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037415 has a single transcript. 2021-10-25 09:34:57.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262787: ['FBtr0305900'] 2021-10-25 09:34:57.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262787 has a single transcript. 2021-10-25 09:34:57.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23154137, 23154193), (23154774, 23154844), (23154967, 23155808), (23154967, 23155131), (23154970, 23155808), (23154970, 23155131), (23155240, 23155439), (23155549, 23155808), (23156011, 23156073), (23156493, 23157500), (23157710, 23157778)] 2021-10-25 09:34:57.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037416: ['FBtr0078599'] 2021-10-25 09:34:57.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037416 has a single transcript. 2021-10-25 09:34:57.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262788: ['FBtr0305902'] 2021-10-25 09:34:57.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262788 has a single transcript. 2021-10-25 09:34:57.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037417: ['FBtr0078601'] 2021-10-25 09:34:57.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037417 has a single transcript. 2021-10-25 09:34:57.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262789: ['FBtr0305903'] 2021-10-25 09:34:57.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262789 has a single transcript. 2021-10-25 09:34:57.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037418: ['FBtr0078614'] 2021-10-25 09:34:57.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037418 has a single transcript. 2021-10-25 09:34:57.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262790: ['FBtr0305906', 'FBtr0339457', 'FBtr0346951'] 2021-10-25 09:34:57.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037419: ['FBtr0078602'] 2021-10-25 09:34:57.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037419 has a single transcript. 2021-10-25 09:34:57.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9055967, 9056023), (9056341, 9056446), (9056341, 9056425), (9056588, 9056653), (9056786, 9057007), (9057350, 9057457), (9058085, 9067507), (9058085, 9060995)] 2021-10-25 09:34:57.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037420: ['FBtr0302305'] 2021-10-25 09:34:57.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037420 has a single transcript. 2021-10-25 09:34:57.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037421: ['FBtr0078604'] 2021-10-25 09:34:57.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037421 has a single transcript. 2021-10-25 09:34:57.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086608: ['FBtr0110805', 'FBtr0308807', 'FBtr0308808', 'FBtr0308809'] 2021-10-25 09:34:57.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037422: ['FBtr0078605'] 2021-10-25 09:34:57.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037422 has a single transcript. 2021-10-25 09:34:57.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037424: ['FBtr0078607'] 2021-10-25 09:34:57.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037424 has a single transcript. 2021-10-25 09:34:57.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037427: ['FBtr0078610', 'FBtr0334536', 'FBtr0334537', 'FBtr0334538'] 2021-10-25 09:34:57.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10352866, 10352928), (10352876, 10352928)] 2021-10-25 09:34:57.169 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.227 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4392248, 4393703), (4392248, 4393658), (4392248, 4393827), (4393768, 4393827)] 2021-10-25 09:34:57.228 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4393703, 4394259, 'FBtr0308808_exon_1') contains intron (4393768, 4393827) 2021-10-25 09:34:57.228 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4393658, 4394259, 'FBtr0308809_exon_1') contains intron (4393768, 4393827) 2021-10-25 09:34:57.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308808_exon_1', 'FBtr0308809_exon_1'] 2021-10-25 09:34:57.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030078: ['FBtr0071356', 'FBtr0346175'] 2021-10-25 09:34:57.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6312073, 6314884), (6316541, 6317773), (6318007, 6318163), (6318420, 6320527), (6320706, 6321809), (6320706, 6320846), (6321152, 6321809), (6321999, 6323806), (6323917, 6323993), (6324172, 6326655)] 2021-10-25 09:34:57.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21502479, 21510105), (21502479, 21507321), (21502479, 21510117), (21502479, 21510866), (21502479, 21507294), (21506335, 21507321), (21507722, 21510117), (21507722, 21510866), (21510201, 21510866), (21511060, 21511122), (21511243, 21511403), (21511968, 21512092), (21512177, 21515887), (21512177, 21512392), (21512177, 21514208), (21512177, 21513516)] 2021-10-25 09:34:57.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:57.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262791: ['FBtr0305907', 'FBtr0346509'] 2021-10-25 09:34:57.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10351736, 10351792), (10351941, 10352027)] 2021-10-25 09:34:57.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030081: ['FBtr0071353'] 2021-10-25 09:34:57.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030081 has a single transcript. 2021-10-25 09:34:57.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030082: ['FBtr0071284', 'FBtr0309871', 'FBtr0301805'] 2021-10-25 09:34:57.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004396: ['FBtr0075557', 'FBtr0075558'] 2021-10-25 09:34:57.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033778: ['FBtr0087815'] 2021-10-25 09:34:57.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033778 has a single transcript. 2021-10-25 09:34:57.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033781: ['FBtr0087788', 'FBtr0300890'] 2021-10-25 09:34:57.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262794: ['FBtr0346322', 'FBtr0305917'] 2021-10-25 09:34:57.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086610: ['FBtr0113461'] 2021-10-25 09:34:57.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086610 has a single transcript. 2021-10-25 09:34:57.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086611: ['FBtr0077061'] 2021-10-25 09:34:57.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086611 has a single transcript. 2021-10-25 09:34:57.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037428: ['FBtr0078611'] 2021-10-25 09:34:57.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037428 has a single transcript. 2021-10-25 09:34:57.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9081083, 9081169)] 2021-10-25 09:34:57.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086613: ['FBtr0083771'] 2021-10-25 09:34:57.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086613 has a single transcript. 2021-10-25 09:34:57.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037429: ['FBtr0081707', 'FBtr0301493'] 2021-10-25 09:34:57.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15536455, 15547875), (15548086, 15549548), (15550045, 15550146), (15550596, 15550863), (15551007, 15551079)] 2021-10-25 09:34:57.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086655: ['FBtr0114364', 'FBtr0114365', 'FBtr0301636', 'FBtr0332950'] 2021-10-25 09:34:57.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12924347, 12924421), (12924351, 12924421)] 2021-10-25 09:34:57.415 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17630956, 17644777), (17644892, 17644956), (17645082, 17645150)] 2021-10-25 09:34:57.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.420 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.441 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6335643, 6335921), (6336171, 6336279), (6336198, 6336279), (6336461, 6336799)] 2021-10-25 09:34:57.442 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.442 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033782: ['FBtr0087789', 'FBtr0331985'] 2021-10-25 09:34:57.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004397: ['FBtr0070420', 'FBtr0342770', 'FBtr0342771'] 2021-10-25 09:34:57.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262795: ['FBtr0346756'] 2021-10-25 09:34:57.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262795 has a single transcript. 2021-10-25 09:34:57.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030085: ['FBtr0071288'] 2021-10-25 09:34:57.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030085 has a single transcript. 2021-10-25 09:34:57.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262801: ['FBtr0081687'] 2021-10-25 09:34:57.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262801 has a single transcript. 2021-10-25 09:34:57.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030086: ['FBtr0071289'] 2021-10-25 09:34:57.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030086 has a single transcript. 2021-10-25 09:34:57.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262806: ['FBtr0347069'] 2021-10-25 09:34:57.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262806 has a single transcript. 2021-10-25 09:34:57.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6503688, 6614104), (6610898, 6614104), (6613870, 6614104), (6615741, 6615936), (6617545, 6617610), (6618172, 6618240), (6618343, 6618563), (6618388, 6618563), (6618741, 6618802)] 2021-10-25 09:34:57.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037430: ['FBtr0081708'] 2021-10-25 09:34:57.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037430 has a single transcript. 2021-10-25 09:34:57.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262807: ['FBtr0339456', 'FBtr0305948', 'FBtr0346950'] 2021-10-25 09:34:57.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037431: ['FBtr0081709'] 2021-10-25 09:34:57.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037431 has a single transcript. 2021-10-25 09:34:57.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030087: ['FBtr0071351', 'FBtr0071352', 'FBtr0309250', 'FBtr0309251', 'FBtr0114594', 'FBtr0114595', 'FBtr0343319'] 2021-10-25 09:34:57.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037432: ['FBtr0081710'] 2021-10-25 09:34:57.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037432 has a single transcript. 2021-10-25 09:34:57.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12924795, 12928963), (12929341, 12929783)] 2021-10-25 09:34:57.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037433: ['FBtr0081711'] 2021-10-25 09:34:57.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037433 has a single transcript. 2021-10-25 09:34:57.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037435: ['FBtr0081712'] 2021-10-25 09:34:57.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037435 has a single transcript. 2021-10-25 09:34:57.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037436: ['FBtr0081713'] 2021-10-25 09:34:57.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037436 has a single transcript. 2021-10-25 09:34:57.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2215122, 2215254), (2215653, 2215712), (2215843, 2215904), (2218095, 2220372), (2220524, 2222472), (2220524, 2222231), (2220524, 2222159)] 2021-10-25 09:34:57.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037439: ['FBtr0081717'] 2021-10-25 09:34:57.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037439 has a single transcript. 2021-10-25 09:34:57.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037440: ['FBtr0081734', 'FBtr0110774', 'FBtr0347005', 'FBtr0344293'] 2021-10-25 09:34:57.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10352866, 10352928), (10352876, 10352928)] 2021-10-25 09:34:57.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033783: ['FBtr0087806', 'FBtr0339738'] 2021-10-25 09:34:57.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043362: ['FBtr0079144'] 2021-10-25 09:34:57.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043362 has a single transcript. 2021-10-25 09:34:57.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12931542, 12931601), (12931741, 12931801), (12933362, 12933440), (12933598, 12933670)] 2021-10-25 09:34:57.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043364: ['FBtr0078083', 'FBtr0078084', 'FBtr0310030'] 2021-10-25 09:34:57.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004400: ['FBtr0086897'] 2021-10-25 09:34:57.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004400 has a single transcript. 2021-10-25 09:34:57.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6371798, 6371857), (6372106, 6372169), (6373236, 6373301), (6373380, 6373813), (6373380, 6373459), (6373380, 6375882)] 2021-10-25 09:34:57.647 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086656: ['FBtr0088623'] 2021-10-25 09:34:57.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086656 has a single transcript. 2021-10-25 09:34:57.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004401: ['FBtr0075198', 'FBtr0075199', 'FBtr0075200', 'FBtr0304977'] 2021-10-25 09:34:57.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9094348, 9094410), (9095008, 9095065), (9095333, 9095394), (9095651, 9097354), (9095651, 9096765), (9095825, 9096765), (9095975, 9097354), (9095975, 9096765), (9096825, 9097354), (9097459, 9097755), (9097513, 9097755), (9097519, 9097755), (9098007, 9098083), (9098413, 9099313), (9098413, 9100512), (9099461, 9101095), (9100657, 9101095), (9101419, 9101565), (9102233, 9102494), (9103100, 9103444)] 2021-10-25 09:34:57.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086657: ['FBtr0081390', 'FBtr0336824'] 2021-10-25 09:34:57.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262808: ['FBtr0306052'] 2021-10-25 09:34:57.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262808 has a single transcript. 2021-10-25 09:34:57.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262810: ['FBtr0306054'] 2021-10-25 09:34:57.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262810 has a single transcript. 2021-10-25 09:34:57.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262811: ['FBtr0306055'] 2021-10-25 09:34:57.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262811 has a single transcript. 2021-10-25 09:34:57.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262812: ['FBtr0306056'] 2021-10-25 09:34:57.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262812 has a single transcript. 2021-10-25 09:34:57.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033784: ['FBtr0087805', 'FBtr0087803', 'FBtr0087804'] 2021-10-25 09:34:57.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262813: ['FBtr0306058'] 2021-10-25 09:34:57.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262813 has a single transcript. 2021-10-25 09:34:57.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(478204, 479086), (478204, 479406)] 2021-10-25 09:34:57.704 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (476445, 479688, 'FBtr0078084_exon_1') contains intron (478204, 479086) 2021-10-25 09:34:57.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078084_exon_1'] 2021-10-25 09:34:57.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262814: ['FBtr0344574', 'FBtr0344575'] 2021-10-25 09:34:57.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20676113, 20676193), (20676388, 20676460), (20677487, 20677543), (20677823, 20677878), (20677954, 20678015), (20678140, 20678200)] 2021-10-25 09:34:57.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17640053, 17643362), (17640053, 17641025), (17641255, 17643362), (17643719, 17644948), (17643726, 17644890), (17643726, 17643978), (17644079, 17644890)] 2021-10-25 09:34:57.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.750 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5884985, 5885050), (5885203, 5885265)] 2021-10-25 09:34:57.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5884931, 5885203, 'FBtr0344574_exon_1') contains intron (5884985, 5885050) 2021-10-25 09:34:57.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344574_exon_1'] 2021-10-25 09:34:57.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12935109, 12935165), (12935499, 12935562), (12935700, 12935778), (12936260, 12936312), (12936260, 12936324)] 2021-10-25 09:34:57.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12935778, 12936535, 'FBtr0087803_exon_1') contains intron (12936260, 12936312) 2021-10-25 09:34:57.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087803_exon_1'] 2021-10-25 09:34:57.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086658: ['FBtr0091640'] 2021-10-25 09:34:57.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086658 has a single transcript. 2021-10-25 09:34:57.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086659: ['FBtr0091917'] 2021-10-25 09:34:57.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086659 has a single transcript. 2021-10-25 09:34:57.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086660: ['FBtr0091629'] 2021-10-25 09:34:57.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086660 has a single transcript. 2021-10-25 09:34:57.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037442: ['FBtr0081720', 'FBtr0081721', 'FBtr0081722', 'FBtr0113198'] 2021-10-25 09:34:57.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043455: ['FBtr0084535', 'FBtr0321261'] 2021-10-25 09:34:57.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086661: ['FBtr0091666'] 2021-10-25 09:34:57.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086661 has a single transcript. 2021-10-25 09:34:57.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262815: ['FBtr0306723'] 2021-10-25 09:34:57.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262815 has a single transcript. 2021-10-25 09:34:57.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086662: ['FBtr0091697'] 2021-10-25 09:34:57.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086662 has a single transcript. 2021-10-25 09:34:57.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086663: ['FBtr0091602'] 2021-10-25 09:34:57.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086663 has a single transcript. 2021-10-25 09:34:57.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262816: ['FBtr0345656', 'FBtr0306048'] 2021-10-25 09:34:57.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086664: ['FBtr0091777'] 2021-10-25 09:34:57.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086664 has a single transcript. 2021-10-25 09:34:57.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086665: ['FBtr0091751'] 2021-10-25 09:34:57.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086665 has a single transcript. 2021-10-25 09:34:57.839 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24048427, 24048485)] 2021-10-25 09:34:57.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086666: ['FBtr0091922'] 2021-10-25 09:34:57.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086666 has a single transcript. 2021-10-25 09:34:57.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086667: ['FBtr0091788'] 2021-10-25 09:34:57.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086667 has a single transcript. 2021-10-25 09:34:57.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16380749, 16380846), (16380985, 16381045)] 2021-10-25 09:34:57.870 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033785: ['FBtr0087790', 'FBtr0087791'] 2021-10-25 09:34:57.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6382968, 6383048), (6383260, 6384980), (6383521, 6384980), (6384722, 6384980), (6385258, 6385358), (6385531, 6385590), (6385682, 6385747), (6385941, 6386002), (6386198, 6386335), (6386689, 6386753), (6386901, 6386969)] 2021-10-25 09:34:57.893 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6382913, 6383260, 'FBtr0081720_exon_1') contains intron (6382968, 6383048) 2021-10-25 09:34:57.893 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6382913, 6383521, 'FBtr0081721_exon_1') contains intron (6382968, 6383048) 2021-10-25 09:34:57.894 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081720_exon_1', 'FBtr0081721_exon_1'] 2021-10-25 09:34:57.894 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043456: ['FBtr0079930', 'FBtr0343740', 'FBtr0303902'] 2021-10-25 09:34:57.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004403: ['FBtr0071094', 'FBtr0071095'] 2021-10-25 09:34:57.925 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12937089, 12938399), (12937096, 12938399), (12938475, 12938567), (12938711, 12938774), (12938996, 12939086), (12940082, 12940151)] 2021-10-25 09:34:57.926 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262817: ['FBtr0306049'] 2021-10-25 09:34:57.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262817 has a single transcript. 2021-10-25 09:34:57.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030088: ['FBtr0071293'] 2021-10-25 09:34:57.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030088 has a single transcript. 2021-10-25 09:34:57.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262818: ['FBtr0306050'] 2021-10-25 09:34:57.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262818 has a single transcript. 2021-10-25 09:34:57.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262819: ['FBtr0306061'] 2021-10-25 09:34:57.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262819 has a single transcript. 2021-10-25 09:34:57.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7933774, 7934008), (7934270, 7934329)] 2021-10-25 09:34:57.947 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7933741, 7934270, 'FBtr0071095_exon_1') contains intron (7933774, 7934008) 2021-10-25 09:34:57.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071095_exon_1'] 2021-10-25 09:34:57.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262820: ['FBtr0306063'] 2021-10-25 09:34:57.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262820 has a single transcript. 2021-10-25 09:34:57.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030089: ['FBtr0071294', 'FBtr0071295', 'FBtr0071296', 'FBtr0071297', 'FBtr0071298', 'FBtr0309254', 'FBtr0309255', 'FBtr0112965', 'FBtr0333808'] 2021-10-25 09:34:57.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262821: ['FBtr0306064'] 2021-10-25 09:34:57.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262821 has a single transcript. 2021-10-25 09:34:57.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10004126, 10004534), (10004571, 10005423), (10005506, 10005567), (10006417, 10006474), (10006585, 10006907), (10007178, 10007254), (10007178, 10007251), (10007341, 10007413), (10007503, 10007566)] 2021-10-25 09:34:57.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:57.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:57.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262822: ['FBtr0347238'] 2021-10-25 09:34:57.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262822 has a single transcript. 2021-10-25 09:34:57.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262823: ['FBtr0346523', 'FBtr0306140'] 2021-10-25 09:34:57.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033787: ['FBtr0087792', 'FBtr0345371'] 2021-10-25 09:34:58.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004404: ['FBtr0071096', 'FBtr0345291'] 2021-10-25 09:34:58.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086668: ['FBtr0091752'] 2021-10-25 09:34:58.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086668 has a single transcript. 2021-10-25 09:34:58.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:58.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.023 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086669: ['FBtr0091766'] 2021-10-25 09:34:58.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086669 has a single transcript. 2021-10-25 09:34:58.034 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12953663, 12953957), (12954349, 12954500), (12954662, 12954775)] 2021-10-25 09:34:58.034 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086670: ['FBtr0091635'] 2021-10-25 09:34:58.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086670 has a single transcript. 2021-10-25 09:34:58.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086671: ['FBtr0091623'] 2021-10-25 09:34:58.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086671 has a single transcript. 2021-10-25 09:34:58.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037443: ['FBtr0290326', 'FBtr0290327', 'FBtr0289939', 'FBtr0289940', 'FBtr0300261'] 2021-10-25 09:34:58.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086672: ['FBtr0091614'] 2021-10-25 09:34:58.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086672 has a single transcript. 2021-10-25 09:34:58.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7934932, 7935174), (7935439, 7935498)] 2021-10-25 09:34:58.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086673: ['FBtr0080914', 'FBtr0331621'] 2021-10-25 09:34:58.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043457: ['FBtr0273268', 'FBtr0340547'] 2021-10-25 09:34:58.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262824: ['FBtr0306044', 'FBtr0308771'] 2021-10-25 09:34:58.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033788: ['FBtr0087797', 'FBtr0345360'] 2021-10-25 09:34:58.115 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19944418, 19944480), (19944631, 19944691), (19944759, 19944839), (19944786, 19944839), (19945169, 19945229), (19945386, 19945438), (19945533, 19945580)] 2021-10-25 09:34:58.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16805262, 16811597), (16807779, 16811597), (16811863, 16813463)] 2021-10-25 09:34:58.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20558051, 20558243), (20558591, 20558649), (20559196, 20559260)] 2021-10-25 09:34:58.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.120 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.120 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.120 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004406: ['FBtr0080571'] 2021-10-25 09:34:58.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004406 has a single transcript. 2021-10-25 09:34:58.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004407: ['FBtr0091627'] 2021-10-25 09:34:58.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004407 has a single transcript. 2021-10-25 09:34:58.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:58.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004414: ['FBtr0078482', 'FBtr0334114'] 2021-10-25 09:34:58.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6389685, 6389757), (6389933, 6390010), (6390124, 6390201), (6390306, 6390388), (6390509, 6390587), (6391093, 6391160), (6391225, 6391304), (6391988, 6393731), (6391988, 6392879), (6392742, 6393731), (6392742, 6392879), (6392959, 6393731), (6393911, 6405741), (6393911, 6405377), (6405483, 6405548), (6405660, 6405741)] 2021-10-25 09:34:58.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6405377, 6405895, 'FBtr0290326_exon_1') contains intron (6405483, 6405548) 2021-10-25 09:34:58.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6405377, 6405660, 'FBtr0290327_exon_2') contains intron (6405483, 6405548) 2021-10-25 09:34:58.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6405377, 6405895, 'FBtr0289939_exon_1') contains intron (6405483, 6405548) 2021-10-25 09:34:58.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6405548, 6405895, 'FBtr0300261_exon_1') contains intron (6405660, 6405741) 2021-10-25 09:34:58.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290326_exon_1', 'FBtr0290327_exon_2', 'FBtr0289939_exon_1', 'FBtr0300261_exon_1'] 2021-10-25 09:34:58.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9108986, 9111081), (9109694, 9110821), (9109694, 9110617), (9109756, 9110821), (9109987, 9110821), (9111005, 9111081), (9111143, 9111386), (9111528, 9111597), (9111786, 9111853), (9112092, 9112162), (9112239, 9113642), (9112239, 9112749), (9112767, 9113642), (9113899, 9113974), (9114570, 9114633), (9114772, 9114837), (9115126, 9115195), (9115711, 9115764), (9115908, 9115970), (9116078, 9116145)] 2021-10-25 09:34:58.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043458: ['FBtr0072711', 'FBtr0332656'] 2021-10-25 09:34:58.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262825: ['FBtr0344657'] 2021-10-25 09:34:58.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262825 has a single transcript. 2021-10-25 09:34:58.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086674: ['FBtr0073803', 'FBtr0113443', 'FBtr0330399', 'FBtr0310432', 'FBtr0310433', 'FBtr0333723'] 2021-10-25 09:34:58.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:58.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262827: ['FBtr0306067'] 2021-10-25 09:34:58.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262827 has a single transcript. 2021-10-25 09:34:58.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033789: ['FBtr0087796'] 2021-10-25 09:34:58.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033789 has a single transcript. 2021-10-25 09:34:58.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262828: ['FBtr0346195', 'FBtr0346196'] 2021-10-25 09:34:58.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033791: ['FBtr0087794', 'FBtr0339747'] 2021-10-25 09:34:58.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1491918, 1491983), (1492229, 1492313), (1492463, 1492645), (1492807, 1492875), (1493037, 1493093), (1493265, 1493328), (1494268, 1494589), (1494946, 1496317)] 2021-10-25 09:34:58.229 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1491983, 1492463, 'FBtr0072711_exon_7') contains intron (1492229, 1492313) 2021-10-25 09:34:58.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072711_exon_7'] 2021-10-25 09:34:58.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004419: ['FBtr0079975', 'FBtr0079976'] 2021-10-25 09:34:58.256 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13058221, 13058316), (13058613, 13058730), (13058871, 13058974), (13059411, 13067131), (13067277, 13067353), (13067511, 13067572), (13067741, 13067809), (13068047, 13068108), (13068236, 13072577), (13073451, 13079083)] 2021-10-25 09:34:58.257 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.257 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.257 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7450904, 7450985)] 2021-10-25 09:34:58.258 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.258 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10239585, 10240491), (10240084, 10240491), (10240591, 10240679), (10241058, 10241132), (10241780, 10241845)] 2021-10-25 09:34:58.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043470: ['FBtr0088121'] 2021-10-25 09:34:58.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043470 has a single transcript. 2021-10-25 09:34:58.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043471: ['FBtr0331940'] 2021-10-25 09:34:58.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043471 has a single transcript. 2021-10-25 09:34:58.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043530: ['FBtr0087420'] 2021-10-25 09:34:58.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043530 has a single transcript. 2021-10-25 09:34:58.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262836: ['FBtr0306077'] 2021-10-25 09:34:58.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262836 has a single transcript. 2021-10-25 09:34:58.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043532: ['FBtr0086337', 'FBtr0303458'] 2021-10-25 09:34:58.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262837: ['FBtr0306076', 'FBtr0339458'] 2021-10-25 09:34:58.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033792: ['FBtr0087722', 'FBtr0339748', 'FBtr0345194', 'FBtr0345931'] 2021-10-25 09:34:58.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13564333, 13575901), (13576182, 13576611), (13576351, 13576611), (13576376, 13576611), (13577664, 13580054), (13580185, 13584156), (13584397, 13584860), (13585040, 13585690), (13585827, 13585893), (13586054, 13589921), (13586092, 13589921)] 2021-10-25 09:34:58.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004425: ['FBtr0072628', 'FBtr0336738'] 2021-10-25 09:34:58.359 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073803': ['FBtr0330399']} 2021-10-25 09:34:58.359 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330399']] 2021-10-25 09:34:58.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19865173, 19868233), (19868175, 19868233)] 2021-10-25 09:34:58.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10352866, 10352928), (10352876, 10352928)] 2021-10-25 09:34:58.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037445: ['FBtr0081730', 'FBtr0330192', 'FBtr0330193'] 2021-10-25 09:34:58.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:58.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043533: ['FBtr0086328'] 2021-10-25 09:34:58.421 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13111642, 13122241), (13116500, 13122241), (13122712, 13123053), (13123431, 13123494), (13123858, 13123909), (13123983, 13124042), (13124245, 13124301), (13124414, 13124469), (13124680, 13124746), (13124928, 13124986), (13125452, 13125506)] 2021-10-25 09:34:58.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043533 has a single transcript. 2021-10-25 09:34:58.422 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.423 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262838: ['FBtr0306078'] 2021-10-25 09:34:58.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262838 has a single transcript. 2021-10-25 09:34:58.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043534: ['FBtr0086293', 'FBtr0342691'] 2021-10-25 09:34:58.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262839: ['FBtr0306081'] 2021-10-25 09:34:58.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262839 has a single transcript. 2021-10-25 09:34:58.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262840: ['FBtr0306082'] 2021-10-25 09:34:58.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262840 has a single transcript. 2021-10-25 09:34:58.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6454248, 6454303), (6454739, 6454951), (6455194, 6455257), (6456507, 6456597)] 2021-10-25 09:34:58.443 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.443 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262842: ['FBtr0306084'] 2021-10-25 09:34:58.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262842 has a single transcript. 2021-10-25 09:34:58.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004426: ['FBtr0347605'] 2021-10-25 09:34:58.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004426 has a single transcript. 2021-10-25 09:34:58.452 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081730': ['FBtr0330192']} 2021-10-25 09:34:58.452 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330192']] 2021-10-25 09:34:58.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262843: ['FBtr0306079'] 2021-10-25 09:34:58.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262843 has a single transcript. 2021-10-25 09:34:58.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004427: ['FBtr0072634'] 2021-10-25 09:34:58.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004427 has a single transcript. 2021-10-25 09:34:58.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262844: ['FBtr0306120'] 2021-10-25 09:34:58.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262844 has a single transcript. 2021-10-25 09:34:58.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004428: ['FBtr0072630'] 2021-10-25 09:34:58.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004428 has a single transcript. 2021-10-25 09:34:58.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262845: ['FBtr0306121'] 2021-10-25 09:34:58.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262845 has a single transcript. 2021-10-25 09:34:58.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20504328, 20504391)] 2021-10-25 09:34:58.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004429: ['FBtr0072633'] 2021-10-25 09:34:58.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004429 has a single transcript. 2021-10-25 09:34:58.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262846: ['FBtr0346521', 'FBtr0346522', 'FBtr0306142'] 2021-10-25 09:34:58.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004430: ['FBtr0072631'] 2021-10-25 09:34:58.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004430 has a single transcript. 2021-10-25 09:34:58.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004431: ['FBtr0072637'] 2021-10-25 09:34:58.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004431 has a single transcript. 2021-10-25 09:34:58.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004432: ['FBtr0074238'] 2021-10-25 09:34:58.508 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004432 has a single transcript. 2021-10-25 09:34:58.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037446: ['FBtr0081728', 'FBtr0302383', 'FBtr0330191'] 2021-10-25 09:34:58.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004435: ['FBtr0087829', 'FBtr0087830', 'FBtr0087831', 'FBtr0087832', 'FBtr0087833', 'FBtr0304955', 'FBtr0333101'] 2021-10-25 09:34:58.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043535: ['FBtr0086294'] 2021-10-25 09:34:58.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043535 has a single transcript. 2021-10-25 09:34:58.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043536: ['FBtr0299804'] 2021-10-25 09:34:58.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043536 has a single transcript. 2021-10-25 09:34:58.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043539: ['FBtr0100503', 'FBtr0334760'] 2021-10-25 09:34:58.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:34:58.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086675: ['FBtr0306738', 'FBtr0306739', 'FBtr0073712', 'FBtr0113493', 'FBtr0343650', 'FBtr0343651', 'FBtr0333319', 'FBtr0333320', 'FBtr0308694'] 2021-10-25 09:34:58.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033793: ['FBtr0087780'] 2021-10-25 09:34:58.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033793 has a single transcript. 2021-10-25 09:34:58.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6457156, 6457277), (6457156, 6457216), (6457430, 6457492), (6458109, 6458166), (6458301, 6458402)] 2021-10-25 09:34:58.585 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6457139, 6457430, 'FBtr0081728_exon_1') contains intron (6457156, 6457277) 2021-10-25 09:34:58.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081728_exon_1'] 2021-10-25 09:34:58.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030090: ['FBtr0071349', 'FBtr0333304'] 2021-10-25 09:34:58.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033794: ['FBtr0087779'] 2021-10-25 09:34:58.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033794 has a single transcript. 2021-10-25 09:34:58.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1992039, 1992092)] 2021-10-25 09:34:58.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033798: ['FBtr0300670'] 2021-10-25 09:34:58.599 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033798 has a single transcript. 2021-10-25 09:34:58.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033799: ['FBtr0087772', 'FBtr0310151', 'FBtr0310152', 'FBtr0310153', 'FBtr0310154', 'FBtr0310155'] 2021-10-25 09:34:58.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9125654, 9126059), (9126302, 9127065), (9127113, 9133939)] 2021-10-25 09:34:58.630 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043550: ['FBtr0075751', 'FBtr0333019'] 2021-10-25 09:34:58.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262847: ['FBtr0306149'] 2021-10-25 09:34:58.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262847 has a single transcript. 2021-10-25 09:34:58.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262848: ['FBtr0306148'] 2021-10-25 09:34:58.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262848 has a single transcript. 2021-10-25 09:34:58.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262849: ['FBtr0306147'] 2021-10-25 09:34:58.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262849 has a single transcript. 2021-10-25 09:34:58.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262850: ['FBtr0306146'] 2021-10-25 09:34:58.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262850 has a single transcript. 2021-10-25 09:34:58.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030091: ['FBtr0071299'] 2021-10-25 09:34:58.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030091 has a single transcript. 2021-10-25 09:34:58.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12612851, 12615906), (12612851, 12613566), (12612884, 12615906), (12612884, 12613566), (12614345, 12615906), (12615829, 12615906), (12616081, 12616162), (12616414, 12616539), (12616724, 12616786), (12616941, 12617071), (12616941, 12617455), (12617200, 12617794), (12617200, 12617455), (12617584, 12617794), (12617924, 12617986), (12618140, 12618442), (12618140, 12618203), (12618311, 12618780), (12618550, 12618780), (12618550, 12619063)] 2021-10-25 09:34:58.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262851: ['FBtr0306145'] 2021-10-25 09:34:58.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262851 has a single transcript. 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0087829_exon_3') contains intron (12616081, 12616162) 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13843917, 13844014)] 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0087830_exon_3') contains intron (12616081, 12616162) 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030092: ['FBtr0071348', 'FBtr0333477'] 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0087831_exon_2') contains intron (12616081, 12616162) 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.689 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0087832_exon_2') contains intron (12616081, 12616162) 2021-10-25 09:34:58.690 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0304955_exon_2') contains intron (12616081, 12616162) 2021-10-25 09:34:58.690 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12615906, 12616414, 'FBtr0333101_exon_2') contains intron (12616081, 12616162) 2021-10-25 09:34:58.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087829_exon_3', 'FBtr0087830_exon_3', 'FBtr0087831_exon_2', 'FBtr0087832_exon_2', 'FBtr0304955_exon_2', 'FBtr0333101_exon_2'] 2021-10-25 09:34:58.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037447: ['FBtr0081729'] 2021-10-25 09:34:58.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037447 has a single transcript. 2021-10-25 09:34:58.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262852: ['FBtr0306144'] 2021-10-25 09:34:58.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262852 has a single transcript. 2021-10-25 09:34:58.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262853: ['FBtr0306143'] 2021-10-25 09:34:58.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262853 has a single transcript. 2021-10-25 09:34:58.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262854: ['FBtr0306159'] 2021-10-25 09:34:58.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262854 has a single transcript. 2021-10-25 09:34:58.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037448: ['FBtr0081672', 'FBtr0081673', 'FBtr0081674', 'FBtr0308037', 'FBtr0308038', 'FBtr0308039', 'FBtr0344268', 'FBtr0344269', 'FBtr0344704', 'FBtr0339332', 'FBtr0339333', 'FBtr0339334'] 2021-10-25 09:34:58.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262855: ['FBtr0306161'] 2021-10-25 09:34:58.724 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262855 has a single transcript. 2021-10-25 09:34:58.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262856: ['FBtr0310202'] 2021-10-25 09:34:58.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262856 has a single transcript. 2021-10-25 09:34:58.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9148625, 9148694), (9148625, 9148690)] 2021-10-25 09:34:58.736 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.736 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262857: ['FBtr0445728'] 2021-10-25 09:34:58.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043575: ['FBtr0088709'] 2021-10-25 09:34:58.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262857 has a single transcript. 2021-10-25 09:34:58.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043575 has a single transcript. 2021-10-25 09:34:58.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13164489, 13164545), (13164618, 13164676), (13164831, 13166423), (13166630, 13167885), (13166630, 13167902), (13166635, 13167902), (13166635, 13167885), (13166635, 13167824), (13166635, 13167788)] 2021-10-25 09:34:58.745 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262858: ['FBtr0306166', 'FBtr0339136'] 2021-10-25 09:34:58.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043576: ['FBtr0088707'] 2021-10-25 09:34:58.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043576 has a single transcript. 2021-10-25 09:34:58.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043577: ['FBtr0075320', 'FBtr0333627'] 2021-10-25 09:34:58.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12917814, 12918576), (12918013, 12918576), (12919709, 12941719), (12919709, 12939014), (12938666, 12939014), (12938931, 12939014), (12939242, 12941719), (12939249, 12941719), (12941448, 12941719), (12942847, 12943085), (12942856, 12943085), (12943130, 12943192), (12943450, 12943512), (12943756, 12945165)] 2021-10-25 09:34:58.786 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12938516, 12939242, 'FBtr0073712_exon_1') contains intron (12938666, 12939014) 2021-10-25 09:34:58.787 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12938516, 12939242, 'FBtr0343650_exon_1') contains intron (12938666, 12939014) 2021-10-25 09:34:58.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073712_exon_1', 'FBtr0343650_exon_1'] 2021-10-25 09:34:58.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24634926, 24634986)] 2021-10-25 09:34:58.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030093: ['FBtr0071300'] 2021-10-25 09:34:58.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030093 has a single transcript. 2021-10-25 09:34:58.805 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16726911, 16726971), (16726911, 16726991)] 2021-10-25 09:34:58.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.807 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030096: ['FBtr0071342'] 2021-10-25 09:34:58.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030096 has a single transcript. 2021-10-25 09:34:58.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030097: ['FBtr0071341'] 2021-10-25 09:34:58.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030097 has a single transcript. 2021-10-25 09:34:58.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030098: ['FBtr0071304', 'FBtr0332623'] 2021-10-25 09:34:58.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262866: ['FBtr0077360', 'FBtr0333715'] 2021-10-25 09:34:58.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043578: ['FBtr0075348'] 2021-10-25 09:34:58.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043578 has a single transcript. 2021-10-25 09:34:58.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043783: ['FBtr0078424'] 2021-10-25 09:34:58.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043783 has a single transcript. 2021-10-25 09:34:58.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9192344, 9192436)] 2021-10-25 09:34:58.877 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9191656, 9192548, 'FBtr0071304_exon_1') contains intron (9192344, 9192436) 2021-10-25 09:34:58.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071304_exon_1'] 2021-10-25 09:34:58.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043791: ['FBtr0082060'] 2021-10-25 09:34:58.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043791 has a single transcript. 2021-10-25 09:34:58.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22532502, 22532855)] 2021-10-25 09:34:58.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043792: ['FBtr0072413', 'FBtr0072414', 'FBtr0072415', 'FBtr0072416', 'FBtr0309244', 'FBtr0300956', 'FBtr0300957'] 2021-10-25 09:34:58.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030099: ['FBtr0071305'] 2021-10-25 09:34:58.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030099 has a single transcript. 2021-10-25 09:34:58.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030100: ['FBtr0071306'] 2021-10-25 09:34:58.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030100 has a single transcript. 2021-10-25 09:34:58.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030101: ['FBtr0071339', 'FBtr0071340'] 2021-10-25 09:34:58.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262867: ['FBtr0336523', 'FBtr0336524', 'FBtr0086003', 'FBtr0307500', 'FBtr0307501'] 2021-10-25 09:34:58.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004436: ['FBtr0078849', 'FBtr0306106'] 2021-10-25 09:34:58.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6478424, 6478762), (6478685, 6478759), (6478685, 6478762), (6479384, 6480861), (6479384, 6489626), (6479384, 6484689), (6479384, 6484704), (6479384, 6484736), (6479453, 6484689), (6480927, 6480996), (6481251, 6484689), (6483178, 6489626), (6484773, 6489626), (6487323, 6489626), (6489552, 6489626), (6489715, 6490157), (6490381, 6490522), (6490973, 6491040), (6491534, 6492609), (6491981, 6492609), (6493374, 6493546)] 2021-10-25 09:34:58.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033802: ['FBtr0087771', 'FBtr0344197', 'FBtr0310499', 'FBtr0334468', 'FBtr0339516'] 2021-10-25 09:34:58.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:58.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9195221, 9195550), (9196119, 9196195), (9196136, 9196195)] 2021-10-25 09:34:58.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:58.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4950404, 4950466), (4950752, 4952452)] 2021-10-25 09:34:59.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24929017, 24929072), (24929198, 24929278), (24929410, 24929478), (24929718, 24929771), (24929970, 24934057), (24930288, 24930344), (24930473, 24930531), (24930663, 24930722), (24931161, 24934057), (24931800, 24931873), (24932002, 24932069), (24932201, 24932255), (24932694, 24934057), (24934483, 24934551), (24934835, 24936228), (24934835, 24937303)] 2021-10-25 09:34:59.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030102: ['FBtr0071336', 'FBtr0340494'] 2021-10-25 09:34:59.068 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6184348, 6184408), (6184722, 6185279), (6185618, 6185683), (6185847, 6185906), (6186086, 6186154), (6186336, 6186474), (6186689, 6189084), (6188819, 6189084), (6189230, 6189290), (6189421, 6195651)] 2021-10-25 09:34:59.068 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6188069, 6189230, 'FBtr0336524_exon_3') contains intron (6188819, 6189084) 2021-10-25 09:34:59.069 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336524_exon_3'] 2021-10-25 09:34:59.069 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004449: ['FBtr0078509', 'FBtr0330159', 'FBtr0306107'] 2021-10-25 09:34:59.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9207071, 9209432)] 2021-10-25 09:34:59.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.093 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13179013, 13180989), (13179013, 13184776), (13179013, 13179587), (13180110, 13184776), (13183234, 13184776), (13185175, 13189560), (13185175, 13185783), (13186155, 13186272), (13186532, 13186599), (13186922, 13186980), (13187319, 13187393), (13187908, 13189560)] 2021-10-25 09:34:59.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030103: ['FBtr0071307'] 2021-10-25 09:34:59.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030103 has a single transcript. 2021-10-25 09:34:59.157 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22297879, 22297988), (22301316, 22301925), (22301316, 22302794), (22301952, 22302794), (22303002, 22303062), (22303608, 22303698), (22304110, 22304245), (22304529, 22307546), (22304529, 22304966), (22305764, 22306041), (22306914, 22307546), (22308191, 22340461), (22340641, 22406891)] 2021-10-25 09:34:59.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030104: ['FBtr0071308'] 2021-10-25 09:34:59.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030104 has a single transcript. 2021-10-25 09:34:59.158 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.168 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330159': ['FBtr0306107']} 2021-10-25 09:34:59.169 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0306107']] 2021-10-25 09:34:59.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030105: ['FBtr0071309', 'FBtr0346164'] 2021-10-25 09:34:59.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086676: ['FBtr0089589', 'FBtr0089590', 'FBtr0089591', 'FBtr0089592', 'FBtr0089593'] 2021-10-25 09:34:59.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9217095, 9217148)] 2021-10-25 09:34:59.222 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004456: ['FBtr0073731', 'FBtr0073732', 'FBtr0340190', 'FBtr0330398', 'FBtr0310647', 'FBtr0310648'] 2021-10-25 09:34:59.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030107: ['FBtr0071310'] 2021-10-25 09:34:59.275 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030107 has a single transcript. 2021-10-25 09:34:59.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262869: ['FBtr0340192', 'FBtr0330033', 'FBtr0346115', 'FBtr0306199', 'FBtr0306200', 'FBtr0306201', 'FBtr0306202', 'FBtr0306203', 'FBtr0306204', 'FBtr0306205'] 2021-10-25 09:34:59.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16125782, 16131541), (16131899, 16132308), (16132635, 16136026), (16132635, 16133421), (16132635, 16132828), (16133090, 16136026), (16133683, 16136026), (16136125, 16136186), (16136360, 16136424), (16136566, 16136833), (16136566, 16137204), (16137029, 16137204)] 2021-10-25 09:34:59.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030108: ['FBtr0071311'] 2021-10-25 09:34:59.288 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030108 has a single transcript. 2021-10-25 09:34:59.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033806: ['FBtr0087736', 'FBtr0087737'] 2021-10-25 09:34:59.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030109: ['FBtr0071334'] 2021-10-25 09:34:59.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030109 has a single transcript. 2021-10-25 09:34:59.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030114: ['FBtr0071314', 'FBtr0071315', 'FBtr0071316', 'FBtr0340121', 'FBtr0340122', 'FBtr0340123'] 2021-10-25 09:34:59.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043796: ['FBtr0070925'] 2021-10-25 09:34:59.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043796 has a single transcript. 2021-10-25 09:34:59.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043799: ['FBtr0084711', 'FBtr0303480'] 2021-10-25 09:34:59.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13206991, 13207066), (13206991, 13207061), (13207349, 13207405), (13207596, 13207650), (13208193, 13208252)] 2021-10-25 09:34:59.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13215862, 13215918), (13216986, 13217060), (13217200, 13217267), (13218664, 13219747), (13219881, 13220033), (13220146, 13224983), (13220146, 13223825), (13223852, 13224983), (13225111, 13239156), (13225111, 13256616), (13239225, 13258383), (13239225, 13256616)] 2021-10-25 09:34:59.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.378 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073731': ['FBtr0330398']} 2021-10-25 09:34:59.379 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330398']] 2021-10-25 09:34:59.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24877134, 24877218), (24877134, 24877237)] 2021-10-25 09:34:59.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033807: ['FBtr0087766', 'FBtr0300286'] 2021-10-25 09:34:59.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043806: ['FBtr0076529'] 2021-10-25 09:34:59.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043806 has a single transcript. 2021-10-25 09:34:59.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043825: ['FBtr0339130', 'FBtr0300805'] 2021-10-25 09:34:59.445 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9250563, 9250627), (9251029, 9252527), (9252393, 9252527), (9253571, 9253650), (9253858, 9253916), (9254039, 9254112), (9254349, 9255627), (9254349, 9255636), (9254924, 9255627)] 2021-10-25 09:34:59.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9250419, 9251029, 'FBtr0071316_exon_1') contains intron (9250563, 9250627) 2021-10-25 09:34:59.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9250419, 9251029, 'FBtr0340122_exon_1') contains intron (9250563, 9250627) 2021-10-25 09:34:59.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9250419, 9251029, 'FBtr0340123_exon_1') contains intron (9250563, 9250627) 2021-10-25 09:34:59.447 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071316_exon_1', 'FBtr0340122_exon_1', 'FBtr0340123_exon_1'] 2021-10-25 09:34:59.447 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13212932, 13213022), (13212962, 13213022), (13213436, 13213750), (13213931, 13214418), (13213931, 13214070)] 2021-10-25 09:34:59.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086677: ['FBtr0088021', 'FBtr0333065'] 2021-10-25 09:34:59.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10644150, 10644344), (10644485, 10644557), (10645097, 10645159), (10645315, 10645369)] 2021-10-25 09:34:59.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037449: ['FBtr0081675'] 2021-10-25 09:34:59.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037449 has a single transcript. 2021-10-25 09:34:59.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033808: ['FBtr0087738'] 2021-10-25 09:34:59.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033808 has a single transcript. 2021-10-25 09:34:59.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037454: ['FBtr0081705'] 2021-10-25 09:34:59.513 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037454 has a single transcript. 2021-10-25 09:34:59.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033809: ['FBtr0087765', 'FBtr0333151'] 2021-10-25 09:34:59.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037455: ['FBtr0089748'] 2021-10-25 09:34:59.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037455 has a single transcript. 2021-10-25 09:34:59.522 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20381574, 20381961), (20382072, 20382167), (20382295, 20383110), (20383333, 20383803), (20383868, 20385651), (20385979, 20387058), (20387282, 20387418), (20387624, 20389961), (20390156, 20390245), (20390430, 20390757), (20390813, 20401178), (20390813, 20393666), (20390813, 20398526), (20393999, 20401178), (20393999, 20398526), (20398627, 20399357), (20399967, 20401178), (20401306, 20403012), (20403160, 20403223), (20403394, 20411081), (20411204, 20465006), (20411204, 20437680), (20438135, 20449458), (20438135, 20449444), (20465110, 20480692), (20465110, 20483976), (20481630, 20483976)] 2021-10-25 09:34:59.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12092668, 12092746), (12092907, 12116598)] 2021-10-25 09:34:59.523 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.524 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037456: ['FBtr0081703'] 2021-10-25 09:34:59.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037456 has a single transcript. 2021-10-25 09:34:59.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037460: ['FBtr0081701'] 2021-10-25 09:34:59.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037460 has a single transcript. 2021-10-25 09:34:59.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037461: ['FBtr0081700', 'FBtr0337023'] 2021-10-25 09:34:59.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043841: ['FBtr0080391', 'FBtr0080390', 'FBtr0080389', 'FBtr0100125', 'FBtr0305263', 'FBtr0334761', 'FBtr0334762'] 2021-10-25 09:34:59.560 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330033': ['FBtr0306201']} 2021-10-25 09:34:59.560 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0306201']] 2021-10-25 09:34:59.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13215799, 13215855), (13215966, 13216022), (13216103, 13216158), (13216259, 13216347), (13216259, 13216603), (13216404, 13216603), (13216697, 13216760), (13217478, 13217588), (13218199, 13219087), (13218303, 13219087)] 2021-10-25 09:34:59.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004463: ['FBtr0087977'] 2021-10-25 09:34:59.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004463 has a single transcript. 2021-10-25 09:34:59.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004465: ['FBtr0075359'] 2021-10-25 09:34:59.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004465 has a single transcript. 2021-10-25 09:34:59.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086679: ['FBtr0081887', 'FBtr0347576', 'FBtr0347577'] 2021-10-25 09:34:59.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004507: ['FBtr0077828', 'FBtr0100485'] 2021-10-25 09:34:59.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6628590, 6628664), (6628614, 6628664), (6628775, 6628830)] 2021-10-25 09:34:59.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.629 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2131254, 2134438), (2134967, 2135037), (2136644, 2136730)] 2021-10-25 09:34:59.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.630 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033810: ['FBtr0087764', 'FBtr0345470'] 2021-10-25 09:34:59.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037462: ['FBtr0081681'] 2021-10-25 09:34:59.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037462 has a single transcript. 2021-10-25 09:34:59.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8662981, 8663059), (8663560, 8663642), (8663903, 8670499), (8663903, 8665061)] 2021-10-25 09:34:59.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037463: ['FBtr0081631'] 2021-10-25 09:34:59.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037463 has a single transcript. 2021-10-25 09:34:59.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037464: ['FBtr0081633', 'FBtr0300904', 'FBtr0300905'] 2021-10-25 09:34:59.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030116: ['FBtr0304143'] 2021-10-25 09:34:59.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030116 has a single transcript. 2021-10-25 09:34:59.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13219884, 13219943)] 2021-10-25 09:34:59.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030117: ['FBtr0071318'] 2021-10-25 09:34:59.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030117 has a single transcript. 2021-10-25 09:34:59.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030120: ['FBtr0071328'] 2021-10-25 09:34:59.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030120 has a single transcript. 2021-10-25 09:34:59.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030121: ['FBtr0071327', 'FBtr0302964'] 2021-10-25 09:34:59.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004509: ['FBtr0089987', 'FBtr0089985', 'FBtr0089983', 'FBtr0089984', 'FBtr0089982', 'FBtr0336804', 'FBtr0336805', 'FBtr0336806', 'FBtr0310618'] 2021-10-25 09:34:59.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12404130, 12404435), (12404177, 12407208), (12404177, 12407184), (12404177, 12404435), (12407466, 12407549), (12407734, 12409455), (12409623, 12421640), (12421829, 12423333), (12421829, 12423322)] 2021-10-25 09:34:59.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7062509, 7062575), (7063176, 7063254)] 2021-10-25 09:34:59.755 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7062174, 7064370, 'FBtr0081633_exon_1') contains intron (7062509, 7062575) 2021-10-25 09:34:59.756 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7062575, 7064370, 'FBtr0300904_exon_2') contains intron (7063176, 7063254) 2021-10-25 09:34:59.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081633_exon_1', 'FBtr0300904_exon_2'] 2021-10-25 09:34:59.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9271854, 9271915), (9272603, 9272665), (9272799, 9272859)] 2021-10-25 09:34:59.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9272665, 9272960, 'FBtr0071327_exon_1') contains intron (9272799, 9272859) 2021-10-25 09:34:59.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071327_exon_1'] 2021-10-25 09:34:59.762 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033812: ['FBtr0087761'] 2021-10-25 09:34:59.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033812 has a single transcript. 2021-10-25 09:34:59.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033813: ['FBtr0087742'] 2021-10-25 09:34:59.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033813 has a single transcript. 2021-10-25 09:34:59.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033814: ['FBtr0087760', 'FBtr0340493'] 2021-10-25 09:34:59.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086680: ['FBtr0076944', 'FBtr0345911', 'FBtr0330059', 'FBtr0346998', 'FBtr0346999'] 2021-10-25 09:34:59.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030122: ['FBtr0339949', 'FBtr0071319'] 2021-10-25 09:34:59.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13232550, 13233469)] 2021-10-25 09:34:59.933 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.986 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9273911, 9273971), (9274256, 9274313), (9274690, 9274926)] 2021-10-25 09:34:59.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:34:59.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:34:59.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037465: ['FBtr0081645'] 2021-10-25 09:34:59.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037465 has a single transcript. 2021-10-25 09:35:00.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037466: ['FBtr0081634', 'FBtr0305315', 'FBtr0334667'] 2021-10-25 09:35:00.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033815: ['FBtr0087743'] 2021-10-25 09:35:00.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033815 has a single transcript. 2021-10-25 09:35:00.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033816: ['FBtr0087759'] 2021-10-25 09:35:00.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033816 has a single transcript. 2021-10-25 09:35:00.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033817: ['FBtr0087744'] 2021-10-25 09:35:00.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033817 has a single transcript. 2021-10-25 09:35:00.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033818: ['FBtr0087757', 'FBtr0087758'] 2021-10-25 09:35:00.064 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:00.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030136: ['FBtr0071360', 'FBtr0343411'] 2021-10-25 09:35:00.079 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076944': ['FBtr0330059', 'FBtr0346998', 'FBtr0346999']} 2021-10-25 09:35:00.085 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330059', 'FBtr0346998', 'FBtr0346999']] 2021-10-25 09:35:00.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9554928, 9554995)] 2021-10-25 09:35:00.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13249331, 13249400), (13249497, 13250008), (13251362, 13251427)] 2021-10-25 09:35:00.171 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13250008, 13251724, 'FBtr0087757_exon_1') contains intron (13251362, 13251427) 2021-10-25 09:35:00.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087757_exon_1'] 2021-10-25 09:35:00.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7067729, 7067787), (7068089, 7068707), (7068094, 7068707), (7068948, 7069005), (7069188, 7069284), (7069938, 7070024), (7070573, 7070631), (7070824, 7070893), (7071217, 7071272)] 2021-10-25 09:35:00.173 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7069005, 7069938, 'FBtr0305315_exon_4') contains intron (7069188, 7069284) 2021-10-25 09:35:00.173 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25348339, 25352116), (25352192, 25354148), (25353605, 25353671), (25353867, 25354148), (25354315, 25356223), (25354315, 25354947), (25356078, 25356223), (25356342, 25356396), (25356570, 25356633), (25357508, 25357571), (25357700, 25357870), (25358116, 25396711), (25384877, 25396711), (25397562, 25417937), (25417964, 25472481), (25417964, 25431916), (25431981, 25438387), (25431981, 25461364), (25431981, 25472481), (25438452, 25472481), (25461420, 25472481)] 2021-10-25 09:35:00.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305315_exon_4'] 2021-10-25 09:35:00.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.176 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086681: ['FBtr0305341'] 2021-10-25 09:35:00.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086681 has a single transcript. 2021-10-25 09:35:00.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262870: ['FBtr0333591', 'FBtr0333592', 'FBtr0333593', 'FBtr0333594', 'FBtr0302646', 'FBtr0306206', 'FBtr0306207'] 2021-10-25 09:35:00.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086683: ['FBtr0111239', 'FBtr0111241', 'FBtr0111240'] 2021-10-25 09:35:00.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030137: ['FBtr0071371'] 2021-10-25 09:35:00.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030137 has a single transcript. 2021-10-25 09:35:00.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033819: ['FBtr0087756'] 2021-10-25 09:35:00.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033819 has a single transcript. 2021-10-25 09:35:00.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043853: ['FBtr0081560'] 2021-10-25 09:35:00.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043853 has a single transcript. 2021-10-25 09:35:00.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030141: ['FBtr0071363'] 2021-10-25 09:35:00.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033820: ['FBtr0087746', 'FBtr0087747', 'FBtr0345471'] 2021-10-25 09:35:00.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043854: ['FBtr0290281', 'FBtr0344864'] 2021-10-25 09:35:00.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030141 has a single transcript. 2021-10-25 09:35:00.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030148: ['FBtr0071403', 'FBtr0346168'] 2021-10-25 09:35:00.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6372581, 6373295), (6375307, 6375373)] 2021-10-25 09:35:00.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037467: ['FBtr0081643', 'FBtr0305316'] 2021-10-25 09:35:00.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9659478, 9659542), (9660199, 9660285), (9660815, 9660880), (9660954, 9661021), (9661424, 9662362)] 2021-10-25 09:35:00.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13257042, 13257122)] 2021-10-25 09:35:00.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13256586, 13257378, 'FBtr0087747_exon_1') contains intron (13257042, 13257122) 2021-10-25 09:35:00.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13256586, 13257446, 'FBtr0345471_exon_1') contains intron (13257042, 13257122) 2021-10-25 09:35:00.395 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087747_exon_1', 'FBtr0345471_exon_1'] 2021-10-25 09:35:00.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23067083, 23067144), (23068101, 23068199), (23068144, 23068199)] 2021-10-25 09:35:00.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7071861, 7071915), (7072574, 7072653), (7073125, 7073181), (7074182, 7074248), (7074339, 7074431)] 2021-10-25 09:35:00.451 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7074248, 7074452, 'FBtr0081643_exon_1') contains intron (7074339, 7074431) 2021-10-25 09:35:00.452 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081643_exon_1'] 2021-10-25 09:35:00.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043865: ['FBtr0301788'] 2021-10-25 09:35:00.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043865 has a single transcript. 2021-10-25 09:35:00.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043884: ['FBtr0084562', 'FBtr0084563', 'FBtr0305043', 'FBtr0334942', 'FBtr0334943', 'FBtr0345261'] 2021-10-25 09:35:00.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030151: ['FBtr0089384', 'FBtr0089385', 'FBtr0089386', 'FBtr0089383', 'FBtr0336922'] 2021-10-25 09:35:00.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033821: ['FBtr0087748'] 2021-10-25 09:35:00.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033821 has a single transcript. 2021-10-25 09:35:00.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037468: ['FBtr0081635', 'FBtr0081636', 'FBtr0081637', 'FBtr0334668'] 2021-10-25 09:35:00.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4630232, 4642676), (4630343, 4642676), (4637754, 4642676), (4637757, 4642676), (4642807, 4642937), (4643244, 4643396), (4643726, 4644043), (4644225, 4645559), (4646180, 4646823), (4647024, 4650320), (4650776, 4650936), (4651184, 4655972), (4656372, 4656559), (4656774, 4659479), (4660012, 4660076), (4660409, 4664126), (4664323, 4664422), (4664953, 4670117), (4670402, 4671825), (4671961, 4673172), (4673392, 4674955), (4675229, 4675381), (4675947, 4681217), (4675947, 4686967)] 2021-10-25 09:35:00.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033826: ['FBtr0087754'] 2021-10-25 09:35:00.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086686: ['FBtr0082975', 'FBtr0344158', 'FBtr0304678'] 2021-10-25 09:35:00.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033826 has a single transcript. 2021-10-25 09:35:00.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033827: ['FBtr0087753', 'FBtr0345663'] 2021-10-25 09:35:00.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13299913, 13300200), (13300819, 13301099), (13301293, 13301365)] 2021-10-25 09:35:00.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9778799, 9778867), (9778809, 9778867), (9778913, 9779051), (9778933, 9779051), (9779242, 9780240), (9780301, 9780510), (9780892, 9781158)] 2021-10-25 09:35:00.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.740 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7074973, 7076889), (7076836, 7076889)] 2021-10-25 09:35:00.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7076806, 7077791, 'FBtr0081637_exon_1') contains intron (7076836, 7076889) 2021-10-25 09:35:00.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14645188, 14645295), (14645397, 14645519), (14646664, 14646726), (14648570, 14649009), (14649368, 14655157), (14649368, 14655459)] 2021-10-25 09:35:00.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081637_exon_1'] 2021-10-25 09:35:00.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.798 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.797 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24230648, 24231654), (24232974, 24235392), (24232974, 24235816), (24235273, 24235392), (24235273, 24235816), (24235431, 24235816), (24235955, 24236026), (24236270, 24236341), (24236270, 24236344), (24236513, 24236822), (24237122, 24237361), (24239348, 24239415), (24239480, 24239541), (24239757, 24239819), (24239757, 24239828), (24241044, 24241114), (24241044, 24241117), (24241200, 24241300), (24241576, 24241642), (24242218, 24242279), (24242544, 24242654), (24247642, 24247712), (24247889, 24247975)] 2021-10-25 09:35:00.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033828: ['FBtr0087721', 'FBtr0302450'] 2021-10-25 09:35:00.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13353892, 13354042)] 2021-10-25 09:35:00.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086687: ['FBtr0082626', 'FBtr0082627', 'FBtr0082628', 'FBtr0082629', 'FBtr0082630'] 2021-10-25 09:35:00.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004510: ['FBtr0085088', 'FBtr0330167'] 2021-10-25 09:35:00.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037469: ['FBtr0081638'] 2021-10-25 09:35:00.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037469 has a single transcript. 2021-10-25 09:35:00.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037470: ['FBtr0081640', 'FBtr0081641', 'FBtr0333326'] 2021-10-25 09:35:00.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033830: ['FBtr0087720'] 2021-10-25 09:35:00.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033830 has a single transcript. 2021-10-25 09:35:00.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030156: ['FBtr0071397'] 2021-10-25 09:35:00.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030156 has a single transcript. 2021-10-25 09:35:00.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033834: ['FBtr0087717'] 2021-10-25 09:35:00.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033834 has a single transcript. 2021-10-25 09:35:00.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030157: ['FBtr0071388'] 2021-10-25 09:35:00.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030157 has a single transcript. 2021-10-25 09:35:00.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26911542, 26911603), (26912318, 26912373), (26912443, 26912504), (26912619, 26912696)] 2021-10-25 09:35:00.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:00.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:00.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033836: ['FBtr0087716'] 2021-10-25 09:35:00.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033836 has a single transcript. 2021-10-25 09:35:00.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030158: ['FBtr0071389'] 2021-10-25 09:35:00.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030158 has a single transcript. 2021-10-25 09:35:00.985 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085088': ['FBtr0330167']} 2021-10-25 09:35:00.985 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330167']] 2021-10-25 09:35:00.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033842: ['FBtr0087701'] 2021-10-25 09:35:00.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033842 has a single transcript. 2021-10-25 09:35:00.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030159: ['FBtr0071390', 'FBtr0340682'] 2021-10-25 09:35:00.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004511: ['FBtr0073612'] 2021-10-25 09:35:00.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004511 has a single transcript. 2021-10-25 09:35:01.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033844: ['FBtr0087700', 'FBtr0087699', 'FBtr0305993', 'FBtr0332928'] 2021-10-25 09:35:01.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004512: ['FBtr0087801', 'FBtr0302198'] 2021-10-25 09:35:01.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9882752, 9882815)] 2021-10-25 09:35:01.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262871: ['FBtr0330037', 'FBtr0083435', 'FBtr0306209', 'FBtr0306210'] 2021-10-25 09:35:01.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12941173, 12941243), (12941852, 12941955), (12942401, 12942576), (12944138, 12944521), (12944138, 12944232), (12944767, 12944826), (12945020, 12945085), (12945245, 12946175)] 2021-10-25 09:35:01.055 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.057 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7083586, 7083689), (7083891, 7083947), (7084124, 7084182), (7084318, 7084374), (7084481, 7084533), (7084481, 7084542), (7084767, 7084924), (7085357, 7085413), (7085512, 7085881)] 2021-10-25 09:35:01.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12439711, 12444798), (12441608, 12444798), (12442219, 12444798), (12443722, 12444798), (12444137, 12444798), (12445118, 12445977), (12446314, 12446375), (12446561, 12446622)] 2021-10-25 09:35:01.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043900: ['FBtr0085806'] 2021-10-25 09:35:01.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043900 has a single transcript. 2021-10-25 09:35:01.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0043903: ['FBtr0074756'] 2021-10-25 09:35:01.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0043903 has a single transcript. 2021-10-25 09:35:01.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13487909, 13487973), (13488132, 13489741), (13488132, 13491434), (13488132, 13490739), (13488132, 13488916), (13489048, 13491434), (13489873, 13491434), (13490871, 13491434), (13491593, 13491654), (13491895, 13494250)] 2021-10-25 09:35:01.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044011: ['FBtr0089053'] 2021-10-25 09:35:01.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044011 has a single transcript. 2021-10-25 09:35:01.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030160: ['FBtr0071392', 'FBtr0071391'] 2021-10-25 09:35:01.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044020: ['FBtr0088085', 'FBtr0302211'] 2021-10-25 09:35:01.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004513: ['FBtr0077011'] 2021-10-25 09:35:01.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004513 has a single transcript. 2021-10-25 09:35:01.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004514: ['FBtr0078479', 'FBtr0301930'] 2021-10-25 09:35:01.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11653083, 11678205), (11678454, 11679269), (11678454, 11678797), (11678893, 11679269)] 2021-10-25 09:35:01.178 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9884868, 9884937)] 2021-10-25 09:35:01.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17380051, 17384605), (17380135, 17384605), (17384946, 17386901), (17386253, 17386901), (17387423, 17387488), (17387642, 17387709), (17388384, 17388442)] 2021-10-25 09:35:01.179 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9884441, 9885044, 'FBtr0071392_exon_1') contains intron (9884868, 9884937) 2021-10-25 09:35:01.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071392_exon_1'] 2021-10-25 09:35:01.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.180 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037472: ['FBtr0081563'] 2021-10-25 09:35:01.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037472 has a single transcript. 2021-10-25 09:35:01.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037473: ['FBtr0081611'] 2021-10-25 09:35:01.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037473 has a single transcript. 2021-10-25 09:35:01.198 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330037': ['FBtr0083435']} 2021-10-25 09:35:01.198 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0083435']] 2021-10-25 09:35:01.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037475: ['FBtr0081567', 'FBtr0334670'] 2021-10-25 09:35:01.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22035565, 22060979), (22035565, 22060972), (22061404, 22061963), (22063052, 22063681)] 2021-10-25 09:35:01.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044028: ['FBtr0075435'] 2021-10-25 09:35:01.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044028 has a single transcript. 2021-10-25 09:35:01.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030161: ['FBtr0343032', 'FBtr0112966'] 2021-10-25 09:35:01.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7136470, 7136978), (7137356, 7137405), (7137356, 7137420), (7137586, 7137849), (7137994, 7141489)] 2021-10-25 09:35:01.245 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044030: ['FBtr0074785', 'FBtr0346015'] 2021-10-25 09:35:01.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004516: ['FBtr0073275', 'FBtr0073276', 'FBtr0073277', 'FBtr0332980'] 2021-10-25 09:35:01.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033845: ['FBtr0087668', 'FBtr0301387', 'FBtr0344895', 'FBtr0344896'] 2021-10-25 09:35:01.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9888502, 9888570), (9888726, 9888792), (9888909, 9888973), (9889160, 9899388), (9889160, 9899130)] 2021-10-25 09:35:01.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262872: ['FBtr0306228', 'FBtr0306229', 'FBtr0306230', 'FBtr0306231', 'FBtr0306232', 'FBtr0306233'] 2021-10-25 09:35:01.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19479753, 19479813)] 2021-10-25 09:35:01.297 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037477: ['FBtr0303197'] 2021-10-25 09:35:01.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037477 has a single transcript. 2021-10-25 09:35:01.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037478: ['FBtr0081568'] 2021-10-25 09:35:01.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037478 has a single transcript. 2021-10-25 09:35:01.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037481: ['FBtr0081606'] 2021-10-25 09:35:01.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037481 has a single transcript. 2021-10-25 09:35:01.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086690: ['FBtr0099993', 'FBtr0333939', 'FBtr0333940', 'FBtr0333941', 'FBtr0333942', 'FBtr0333943', 'FBtr0333944', 'FBtr0333945', 'FBtr0333946', 'FBtr0333947', 'FBtr0305977', 'FBtr0305979'] 2021-10-25 09:35:01.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037482: ['FBtr0081605'] 2021-10-25 09:35:01.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037482 has a single transcript. 2021-10-25 09:35:01.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037483: ['FBtr0081573', 'FBtr0346144'] 2021-10-25 09:35:01.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030162: ['FBtr0071395', 'FBtr0343031'] 2021-10-25 09:35:01.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044046: ['FBtr0070577'] 2021-10-25 09:35:01.354 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044046 has a single transcript. 2021-10-25 09:35:01.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044047: ['FBtr0070406', 'FBtr0303997', 'FBtr0303998', 'FBtr0333731'] 2021-10-25 09:35:01.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4075538, 4075595), (4075940, 4076798), (4076877, 4078749), (4078817, 4078925), (4079494, 4082402), (4082639, 4084729), (4084798, 4088211), (4084798, 4085622), (4084798, 4085428), (4085529, 4085622)] 2021-10-25 09:35:01.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13501008, 13501473), (13501008, 13502802), (13502398, 13502802), (13502748, 13502802), (13504542, 13504599)] 2021-10-25 09:35:01.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.386 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7201313, 7201374), (7201682, 7201758), (7202318, 7202380), (7202527, 7202583), (7202694, 7202782), (7202940, 7202997)] 2021-10-25 09:35:01.387 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9909832, 9909944), (9910421, 9910479), (9910634, 9910761)] 2021-10-25 09:35:01.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7038278, 7040472), (7038366, 7040472), (7040780, 7040949), (7041159, 7051366), (7042512, 7046319), (7042512, 7046253), (7047214, 7051366), (7049725, 7051366), (7050983, 7051366), (7051645, 7051759), (7053365, 7053475)] 2021-10-25 09:35:01.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037485: ['FBtr0081603', 'FBtr0452102'] 2021-10-25 09:35:01.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030163: ['FBtr0071429', 'FBtr0112968', 'FBtr0336907'] 2021-10-25 09:35:01.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2331847, 2331925), (2332139, 2332343), (2332139, 2332275), (2332139, 2333319), (2332139, 2332538)] 2021-10-25 09:35:01.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7214933, 7215028), (7215441, 7215504), (7215857, 7216382), (7216513, 7216591), (7216703, 7216762), (7216880, 7216942)] 2021-10-25 09:35:01.487 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7216762, 7217083, 'FBtr0081603_exon_1') contains intron (7216880, 7216942) 2021-10-25 09:35:01.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081603_exon_1'] 2021-10-25 09:35:01.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.515 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9963664, 9963724), (9964294, 9964365), (9964294, 9964368), (9964294, 9964351), (9964479, 9964537), (9964584, 9964642)] 2021-10-25 09:35:01.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004552: ['FBtr0073213'] 2021-10-25 09:35:01.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004552 has a single transcript. 2021-10-25 09:35:01.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004554: ['FBtr0083502', 'FBtr0300767'] 2021-10-25 09:35:01.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033846: ['FBtr0087669', 'FBtr0301388'] 2021-10-25 09:35:01.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037486: ['FBtr0081601', 'FBtr0332536', 'FBtr0332537'] 2021-10-25 09:35:01.574 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17611390, 17611453)] 2021-10-25 09:35:01.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.574 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13506793, 13509788), (13509727, 13509788), (13511236, 13511294), (13512208, 13512296), (13512436, 13512503)] 2021-10-25 09:35:01.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.576 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044048: ['FBtr0472645'] 2021-10-25 09:35:01.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044048 has a single transcript. 2021-10-25 09:35:01.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044049: ['FBtr0076372'] 2021-10-25 09:35:01.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044049 has a single transcript. 2021-10-25 09:35:01.601 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15066978, 15067501), (15067612, 15067677), (15069833, 15069931), (15070633, 15071979), (15070633, 15072528), (15073194, 15073306), (15073194, 15074324), (15073194, 15074683), (15073330, 15074324), (15074492, 15074683), (15075847, 15075919), (15076045, 15079081), (15076045, 15080945), (15076045, 15081332), (15081161, 15081332), (15081473, 15081624), (15082518, 15082584), (15084594, 15089791), (15084594, 15094247), (15084594, 15088310), (15094348, 15094468)] 2021-10-25 09:35:01.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7217926, 7217984), (7218338, 7218580), (7218397, 7218580), (7218915, 7218990), (7219121, 7219181), (7219293, 7219357), (7219475, 7219530), (7219475, 7219534)] 2021-10-25 09:35:01.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044050: ['FBtr0076373'] 2021-10-25 09:35:01.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044050 has a single transcript. 2021-10-25 09:35:01.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044051: ['FBtr0076328'] 2021-10-25 09:35:01.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044051 has a single transcript. 2021-10-25 09:35:01.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030164: ['FBtr0071408', 'FBtr0112969', 'FBtr0336905', 'FBtr0336906'] 2021-10-25 09:35:01.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004556: ['FBtr0075347'] 2021-10-25 09:35:01.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004556 has a single transcript. 2021-10-25 09:35:01.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044323: ['FBtr0079536', 'FBtr0079537', 'FBtr0079538', 'FBtr0079539', 'FBtr0306000', 'FBtr0306001', 'FBtr0333096'] 2021-10-25 09:35:01.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033848: ['FBtr0087671'] 2021-10-25 09:35:01.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033848 has a single transcript. 2021-10-25 09:35:01.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033850: ['FBtr0087673'] 2021-10-25 09:35:01.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033850 has a single transcript. 2021-10-25 09:35:01.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004567: ['FBtr0077500'] 2021-10-25 09:35:01.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004567 has a single transcript. 2021-10-25 09:35:01.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033851: ['FBtr0087674'] 2021-10-25 09:35:01.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033851 has a single transcript. 2021-10-25 09:35:01.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004569: ['FBtr0075408'] 2021-10-25 09:35:01.657 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004569 has a single transcript. 2021-10-25 09:35:01.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033853: ['FBtr0087685', 'FBtr0087686', 'FBtr0087687', 'FBtr0300192', 'FBtr0300193'] 2021-10-25 09:35:01.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262873: ['FBtr0306279'] 2021-10-25 09:35:01.663 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262873 has a single transcript. 2021-10-25 09:35:01.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004573: ['FBtr0085746', 'FBtr0334508'] 2021-10-25 09:35:01.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262874: ['FBtr0306280', 'FBtr0306281'] 2021-10-25 09:35:01.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9965460, 9965585), (9965770, 9965836), (9965770, 9965818), (9965774, 9965836), (9966397, 9966457)] 2021-10-25 09:35:01.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30971947, 30977446), (30971947, 31016175), (30977520, 31016175)] 2021-10-25 09:35:01.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.709 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037487: ['FBtr0303219'] 2021-10-25 09:35:01.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037487 has a single transcript. 2021-10-25 09:35:01.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18138585, 18138652)] 2021-10-25 09:35:01.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037488: ['FBtr0303218'] 2021-10-25 09:35:01.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037488 has a single transcript. 2021-10-25 09:35:01.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037489: ['FBtr0081599'] 2021-10-25 09:35:01.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037489 has a single transcript. 2021-10-25 09:35:01.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037490: ['FBtr0081576', 'FBtr0339734'] 2021-10-25 09:35:01.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004574: ['FBtr0073263', 'FBtr0310632'] 2021-10-25 09:35:01.775 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8030839, 8032059), (8031035, 8032059), (8031308, 8032059), (8031575, 8032059), (8032641, 8035820), (8036298, 8036381), (8036298, 8036357), (8036576, 8036836), (8036576, 8037089), (8036576, 8036842), (8036893, 8037089)] 2021-10-25 09:35:01.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262875: ['FBtr0306282'] 2021-10-25 09:35:01.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262875 has a single transcript. 2021-10-25 09:35:01.776 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7247296, 7247365)] 2021-10-25 09:35:01.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262876: ['FBtr0306283'] 2021-10-25 09:35:01.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262876 has a single transcript. 2021-10-25 09:35:01.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13538049, 13538197), (13538855, 13538971), (13539349, 13546514), (13539349, 13539394), (13539349, 13540686), (13539349, 13547449), (13539349, 13542160), (13542563, 13545307)] 2021-10-25 09:35:01.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.791 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262877: ['FBtr0306284', 'FBtr0347283'] 2021-10-25 09:35:01.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:01.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037491: ['FBtr0081598', 'FBtr0339736'] 2021-10-25 09:35:01.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6932397, 6932457)] 2021-10-25 09:35:01.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030167: ['FBtr0112970', 'FBtr0307590'] 2021-10-25 09:35:01.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7248401, 7248456), (7248591, 7248649), (7249244, 7249304)] 2021-10-25 09:35:01.877 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.877 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004575: ['FBtr0100472', 'FBtr0089477', 'FBtr0089475', 'FBtr0100471'] 2021-10-25 09:35:01.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9978594, 9978845), (9978594, 9978719), (9978779, 9978845), (9978989, 9979048), (9979117, 9979171), (9979381, 9979498), (9979618, 9979766)] 2021-10-25 09:35:01.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262878: ['FBtr0306287', 'FBtr0343229'] 2021-10-25 09:35:01.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037492: ['FBtr0081577'] 2021-10-25 09:35:01.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037492 has a single transcript. 2021-10-25 09:35:01.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037493: ['FBtr0445679'] 2021-10-25 09:35:01.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037493 has a single transcript. 2021-10-25 09:35:01.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20473216, 20473268), (20473216, 20473272)] 2021-10-25 09:35:01.943 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037498: ['FBtr0081591'] 2021-10-25 09:35:01.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037498 has a single transcript. 2021-10-25 09:35:01.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030170: ['FBtr0071415', 'FBtr0112971'] 2021-10-25 09:35:01.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037500: ['FBtr0081590'] 2021-10-25 09:35:01.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037500 has a single transcript. 2021-10-25 09:35:01.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037501: ['FBtr0336955'] 2021-10-25 09:35:01.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037501 has a single transcript. 2021-10-25 09:35:01.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10190894, 10193859), (10194013, 10195350), (10195427, 10195715), (10196047, 10196617), (10196781, 10196840), (10196912, 10204004), (10204148, 10204211), (10204316, 10214971), (10215189, 10215531), (10215628, 10217062), (10217230, 10217289), (10218691, 10219778)] 2021-10-25 09:35:01.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037502: ['FBtr0301649'] 2021-10-25 09:35:01.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037502 has a single transcript. 2021-10-25 09:35:01.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037503: ['FBtr0081534'] 2021-10-25 09:35:01.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037503 has a single transcript. 2021-10-25 09:35:01.986 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0100472': ['FBtr0089477', 'FBtr0089475', 'FBtr0100471']} 2021-10-25 09:35:01.986 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0089477', 'FBtr0089475', 'FBtr0100471']] 2021-10-25 09:35:01.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033855: ['FBtr0087676'] 2021-10-25 09:35:01.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033855 has a single transcript. 2021-10-25 09:35:01.991 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10011113, 10011173), (10011116, 10011173), (10012211, 10012270)] 2021-10-25 09:35:01.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:01.993 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:01.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037504: ['FBtr0081559'] 2021-10-25 09:35:01.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037504 has a single transcript. 2021-10-25 09:35:01.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033856: ['FBtr0087677', 'FBtr0305955'] 2021-10-25 09:35:02.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004577: ['FBtr0089287', 'FBtr0301526', 'FBtr0337061'] 2021-10-25 09:35:02.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037506: ['FBtr0081554'] 2021-10-25 09:35:02.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037506 has a single transcript. 2021-10-25 09:35:02.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262879: ['FBtr0344576'] 2021-10-25 09:35:02.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262879 has a single transcript. 2021-10-25 09:35:02.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262880: ['FBtr0306288'] 2021-10-25 09:35:02.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262880 has a single transcript. 2021-10-25 09:35:02.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037512: ['FBtr0081738', 'FBtr0339179'] 2021-10-25 09:35:02.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262881: ['FBtr0306289', 'FBtr0345941'] 2021-10-25 09:35:02.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:02.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044324: ['FBtr0078568', 'FBtr0078569', 'FBtr0078570', 'FBtr0332053', 'FBtr0346095'] 2021-10-25 09:35:02.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030174: ['FBtr0071422', 'FBtr0071423', 'FBtr0071421', 'FBtr0309219', 'FBtr0309220', 'FBtr0309221'] 2021-10-25 09:35:02.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7723223, 7723702)] 2021-10-25 09:35:02.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:02.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.063 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17014974, 17025405), (17016576, 17025405), (17025575, 17025632), (17025575, 17025638), (17025839, 17025901), (17026113, 17026173), (17026918, 17026980), (17027137, 17027198), (17027568, 17027631), (17027737, 17027795)] 2021-10-25 09:35:02.064 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.064 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033859: ['FBtr0087623'] 2021-10-25 09:35:02.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033859 has a single transcript. 2021-10-25 09:35:02.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033860: ['FBtr0087624'] 2021-10-25 09:35:02.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033860 has a single transcript. 2021-10-25 09:35:02.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037513: ['FBtr0081780'] 2021-10-25 09:35:02.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037513 has a single transcript. 2021-10-25 09:35:02.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262882: ['FBtr0306290'] 2021-10-25 09:35:02.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262882 has a single transcript. 2021-10-25 09:35:02.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033861: ['FBtr0087652'] 2021-10-25 09:35:02.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033861 has a single transcript. 2021-10-25 09:35:02.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262883: ['FBtr0306291'] 2021-10-25 09:35:02.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262883 has a single transcript. 2021-10-25 09:35:02.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037514: ['FBtr0081739'] 2021-10-25 09:35:02.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037514 has a single transcript. 2021-10-25 09:35:02.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033862: ['FBtr0087651'] 2021-10-25 09:35:02.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033862 has a single transcript. 2021-10-25 09:35:02.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262885: ['FBtr0306298'] 2021-10-25 09:35:02.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262885 has a single transcript. 2021-10-25 09:35:02.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033863: ['FBtr0087626', 'FBtr0344330'] 2021-10-25 09:35:02.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037515: ['FBtr0081740', 'FBtr0339180', 'FBtr0339181'] 2021-10-25 09:35:02.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262886: ['FBtr0306295', 'FBtr0306296', 'FBtr0306297'] 2021-10-25 09:35:02.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086691: ['FBtr0080746', 'FBtr0332376'] 2021-10-25 09:35:02.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22874699, 22875123), (22876390, 22876456), (22877388, 22877449), (22877875, 22877936), (22878018, 22878150), (22878018, 22878702), (22878018, 22878633), (22878225, 22878633)] 2021-10-25 09:35:02.165 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22877936, 22878184, 'FBtr0078570_exon_1') contains intron (22878018, 22878150) 2021-10-25 09:35:02.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078570_exon_1'] 2021-10-25 09:35:02.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004580: ['FBtr0087056', 'FBtr0340072'] 2021-10-25 09:35:02.183 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:02.184 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.184 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10057665, 10060447), (10057729, 10059690), (10057729, 10060447), (10059840, 10060447), (10060577, 10060666), (10061146, 10061211), (10061348, 10070141), (10070300, 10070560), (10070300, 10070838), (10070300, 10070496), (10070723, 10070838)] 2021-10-25 09:35:02.193 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10070141, 10070868, 'FBtr0071423_exon_1') contains intron (10070300, 10070560) 2021-10-25 09:35:02.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10070496, 10070868, 'FBtr0071421_exon_1') contains intron (10070723, 10070838) 2021-10-25 09:35:02.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10070496, 10070868, 'FBtr0309219_exon_1') contains intron (10070723, 10070838) 2021-10-25 09:35:02.195 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10070560, 10070868, 'FBtr0309220_exon_1') contains intron (10070723, 10070838) 2021-10-25 09:35:02.195 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10070141, 10070723, 'FBtr0309221_exon_2') contains intron (10070300, 10070560) 2021-10-25 09:35:02.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071423_exon_1', 'FBtr0071421_exon_1', 'FBtr0309219_exon_1', 'FBtr0309220_exon_1', 'FBtr0309221_exon_2'] 2021-10-25 09:35:02.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15274390, 15274619), (15274849, 15274921)] 2021-10-25 09:35:02.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22131447, 22131502), (22131699, 22132117), (22131699, 22132232)] 2021-10-25 09:35:02.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7759923, 7760736), (7761274, 7762006), (7762393, 7762456), (7762565, 7762634), (7762921, 7763034)] 2021-10-25 09:35:02.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16974124, 16984265), (16974124, 16979846), (16979895, 16984265), (16984490, 16984698), (16984784, 16984841), (16984931, 16985918), (16986005, 16986070), (16986211, 16986580), (16986636, 16986704), (16986750, 16994159), (16994216, 16994281), (16994353, 16994410)] 2021-10-25 09:35:02.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033864: ['FBtr0087627'] 2021-10-25 09:35:02.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033864 has a single transcript. 2021-10-25 09:35:02.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033865: ['FBtr0087650'] 2021-10-25 09:35:02.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033865 has a single transcript. 2021-10-25 09:35:02.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033866: ['FBtr0087628'] 2021-10-25 09:35:02.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033866 has a single transcript. 2021-10-25 09:35:02.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086693: ['FBtr0070969'] 2021-10-25 09:35:02.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086693 has a single transcript. 2021-10-25 09:35:02.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033867: ['FBtr0087629'] 2021-10-25 09:35:02.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033867 has a single transcript. 2021-10-25 09:35:02.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086694: ['FBtr0077116', 'FBtr0344538'] 2021-10-25 09:35:02.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033868: ['FBtr0087649', 'FBtr0332255'] 2021-10-25 09:35:02.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004581: ['FBtr0072232', 'FBtr0344878'] 2021-10-25 09:35:02.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262887: ['FBtr0306299'] 2021-10-25 09:35:02.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262887 has a single transcript. 2021-10-25 09:35:02.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262888: ['FBtr0344613'] 2021-10-25 09:35:02.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262888 has a single transcript. 2021-10-25 09:35:02.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037516: ['FBtr0081779', 'FBtr0306042'] 2021-10-25 09:35:02.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5791643, 5791695), (5792585, 5792699), (5793852, 5794055)] 2021-10-25 09:35:02.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262889: ['FBtr0306303'] 2021-10-25 09:35:02.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262889 has a single transcript. 2021-10-25 09:35:02.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:02.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262890: ['FBtr0306304', 'FBtr0334743'] 2021-10-25 09:35:02.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23853694, 23853749), (23854431, 23854492), (23855458, 23855517), (23855871, 23857189), (23855871, 23857204)] 2021-10-25 09:35:02.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044328: ['FBtr0332818', 'FBtr0347598', 'FBtr0347599'] 2021-10-25 09:35:02.358 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7771151, 7771210), (7771333, 7771392)] 2021-10-25 09:35:02.359 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7771210, 7771756, 'FBtr0306042_exon_1') contains intron (7771333, 7771392) 2021-10-25 09:35:02.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306042_exon_1'] 2021-10-25 09:35:02.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086695: ['FBtr0347559', 'FBtr0078802'] 2021-10-25 09:35:02.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033869: ['FBtr0087630'] 2021-10-25 09:35:02.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033869 has a single transcript. 2021-10-25 09:35:02.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10772363, 10772439), (10772552, 10772787), (10773229, 10773303)] 2021-10-25 09:35:02.373 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10772787, 10773399, 'FBtr0306304_exon_3') contains intron (10773229, 10773303) 2021-10-25 09:35:02.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306304_exon_3'] 2021-10-25 09:35:02.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033871: ['FBtr0087632'] 2021-10-25 09:35:02.383 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033871 has a single transcript. 2021-10-25 09:35:02.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004583: ['FBtr0078059', 'FBtr0329832'] 2021-10-25 09:35:02.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033872: ['FBtr0087633', 'FBtr0087634', 'FBtr0087635', 'FBtr0087636', 'FBtr0339950', 'FBtr0339951'] 2021-10-25 09:35:02.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9787232, 9799056), (9787243, 9799056), (9799246, 9804687), (9805385, 9805902), (9806095, 9806280), (9806572, 9807719)] 2021-10-25 09:35:02.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5374175, 5374232), (5374390, 5374449)] 2021-10-25 09:35:02.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037517: ['FBtr0081744'] 2021-10-25 09:35:02.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037517 has a single transcript. 2021-10-25 09:35:02.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030177: ['FBtr0071430', 'FBtr0340473'] 2021-10-25 09:35:02.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(431899, 438379), (432117, 438379), (438516, 438581), (438727, 443081), (443161, 443225), (446583, 446641)] 2021-10-25 09:35:02.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037518: ['FBtr0081745'] 2021-10-25 09:35:02.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037518 has a single transcript. 2021-10-25 09:35:02.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037519: ['FBtr0081773', 'FBtr0344624'] 2021-10-25 09:35:02.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262891: ['FBtr0306305'] 2021-10-25 09:35:02.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262891 has a single transcript. 2021-10-25 09:35:02.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262892: ['FBtr0344641'] 2021-10-25 09:35:02.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262892 has a single transcript. 2021-10-25 09:35:02.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262893: ['FBtr0344570', 'FBtr0306309'] 2021-10-25 09:35:02.471 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10083322, 10083381)] 2021-10-25 09:35:02.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086698: ['FBtr0077911', 'FBtr0333544', 'FBtr0333545'] 2021-10-25 09:35:02.481 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7799985, 7800688), (7801337, 7801527), (7801853, 7801917)] 2021-10-25 09:35:02.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.482 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004584: ['FBtr0077678', 'FBtr0290241'] 2021-10-25 09:35:02.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15530527, 15531377), (15530527, 15530663)] 2021-10-25 09:35:02.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044419: ['FBtr0299940', 'FBtr0299941', 'FBtr0347274', 'FBtr0445398'] 2021-10-25 09:35:02.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030178: ['FBtr0290234'] 2021-10-25 09:35:02.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030178 has a single transcript. 2021-10-25 09:35:02.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2970651, 2970713), (2970904, 2970985), (2971054, 2971116), (2971194, 2971255)] 2021-10-25 09:35:02.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13826481, 13829639), (13826517, 13829639), (13826585, 13829639), (13827037, 13829639), (13827409, 13829639), (13829579, 13829639), (13829865, 13830550), (13830718, 13830777)] 2021-10-25 09:35:02.528 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2970713, 2971054, 'FBtr0290241_exon_3') contains intron (2970904, 2970985) 2021-10-25 09:35:02.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290241_exon_3'] 2021-10-25 09:35:02.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030181: ['FBtr0112973', 'FBtr0332895'] 2021-10-25 09:35:02.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037520: ['FBtr0081772'] 2021-10-25 09:35:02.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037520 has a single transcript. 2021-10-25 09:35:02.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037521: ['FBtr0081771', 'FBtr0331691', 'FBtr0331692'] 2021-10-25 09:35:02.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1711867, 1711927), (1712087, 1712144), (1712542, 1712611), (1712542, 1712596), (1713108, 1713166), (1714117, 1714172), (1714473, 1715138)] 2021-10-25 09:35:02.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.554 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262894: ['FBtr0306310'] 2021-10-25 09:35:02.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262894 has a single transcript. 2021-10-25 09:35:02.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262895: ['FBtr0344640'] 2021-10-25 09:35:02.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262895 has a single transcript. 2021-10-25 09:35:02.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262896: ['FBtr0306312'] 2021-10-25 09:35:02.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262896 has a single transcript. 2021-10-25 09:35:02.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10153933, 10154002), (10153945, 10154002), (10154150, 10154384)] 2021-10-25 09:35:02.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262897: ['FBtr0344599'] 2021-10-25 09:35:02.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262897 has a single transcript. 2021-10-25 09:35:02.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262898: ['FBtr0344581'] 2021-10-25 09:35:02.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262898 has a single transcript. 2021-10-25 09:35:02.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262899: ['FBtr0306323', 'FBtr0310579'] 2021-10-25 09:35:02.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004587: ['FBtr0082801', 'FBtr0082802', 'FBtr0082804', 'FBtr0082803', 'FBtr0082806', 'FBtr0300586', 'FBtr0300588', 'FBtr0308195', 'FBtr0308196', 'FBtr0308197'] 2021-10-25 09:35:02.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5780133, 5780383), (5780532, 5780589), (5780774, 5780836), (5780997, 5781550), (5781722, 5781996), (5782308, 5782670), (5782308, 5782624), (5782849, 5782916)] 2021-10-25 09:35:02.609 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5780836, 5781722, 'FBtr0299940_exon_4') contains intron (5780997, 5781550) 2021-10-25 09:35:02.610 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5780836, 5781722, 'FBtr0445398_exon_4') contains intron (5780997, 5781550) 2021-10-25 09:35:02.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299940_exon_4', 'FBtr0445398_exon_4'] 2021-10-25 09:35:02.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7805638, 7806653), (7805638, 7806590), (7806770, 7806911), (7807767, 7807973), (7808326, 7809038)] 2021-10-25 09:35:02.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030183: ['FBtr0071487', 'FBtr0112974', 'FBtr0332898', 'FBtr0332899', 'FBtr0332900'] 2021-10-25 09:35:02.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7739244, 7739295), (7739355, 7739424), (7739355, 7739412)] 2021-10-25 09:35:02.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086704: ['FBtr0085781', 'FBtr0085782', 'FBtr0301346'] 2021-10-25 09:35:02.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262900: ['FBtr0306324'] 2021-10-25 09:35:02.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262900 has a single transcript. 2021-10-25 09:35:02.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262901: ['FBtr0306314', 'FBtr0306315'] 2021-10-25 09:35:02.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037525: ['FBtr0081770', 'FBtr0113202', 'FBtr0113203', 'FBtr0300826', 'FBtr0300827', 'FBtr0333827', 'FBtr0333828', 'FBtr0333829'] 2021-10-25 09:35:02.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31158861, 31160957), (31161076, 31161172), (31161329, 31163539), (31163635, 31166175), (31166279, 31166349), (31166459, 31167325), (31167425, 31168026), (31168461, 31168824), (31168461, 31168779)] 2021-10-25 09:35:02.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10207675, 10207977), (10207675, 10212152), (10208294, 10210007), (10208294, 10212152), (10208294, 10209523)] 2021-10-25 09:35:02.744 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10206592, 10208294, 'FBtr0112974_exon_2') contains intron (10207675, 10207977) 2021-10-25 09:35:02.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112974_exon_2'] 2021-10-25 09:35:02.745 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044452: ['FBtr0072970', 'FBtr0333441'] 2021-10-25 09:35:02.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033873: ['FBtr0087646', 'FBtr0345801'] 2021-10-25 09:35:02.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5127342, 5127402), (5127523, 5128972), (5128513, 5128972)] 2021-10-25 09:35:02.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2774486, 2774567), (2774493, 2774567)] 2021-10-25 09:35:02.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13834846, 13834966)] 2021-10-25 09:35:02.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13661432, 13661701), (13661442, 13661701), (13661592, 13661701), (13661859, 13662160), (13662231, 13662296), (13662404, 13662954), (13662404, 13662969), (13663051, 13665452), (13663051, 13663454), (13664934, 13665452), (13665526, 13665589), (13665901, 13666083), (13666248, 13666355), (13666248, 13666418)] 2021-10-25 09:35:02.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13661587, 13661859, 'FBtr0082804_exon_1') contains intron (13661592, 13661701) 2021-10-25 09:35:02.825 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13662969, 13665526, 'FBtr0082804_exon_4') contains intron (13663051, 13665452) 2021-10-25 09:35:02.826 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13661587, 13661859, 'FBtr0082806_exon_1') contains intron (13661592, 13661701) 2021-10-25 09:35:02.826 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13663454, 13665526, 'FBtr0300586_exon_6') contains intron (13664934, 13665452) 2021-10-25 09:35:02.827 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13662969, 13665526, 'FBtr0300588_exon_5') contains intron (13663051, 13665452) 2021-10-25 09:35:02.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082804_exon_1', 'FBtr0082804_exon_4', 'FBtr0082806_exon_1', 'FBtr0300586_exon_6', 'FBtr0300588_exon_5'] 2021-10-25 09:35:02.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262902: ['FBtr0306316'] 2021-10-25 09:35:02.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262902 has a single transcript. 2021-10-25 09:35:02.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262903: ['FBtr0306319', 'FBtr0306320'] 2021-10-25 09:35:02.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086706: ['FBtr0076557', 'FBtr0076558'] 2021-10-25 09:35:02.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044508: ['FBtr0070292'] 2021-10-25 09:35:02.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044508 has a single transcript. 2021-10-25 09:35:02.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033874: ['FBtr0087637'] 2021-10-25 09:35:02.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033874 has a single transcript. 2021-10-25 09:35:02.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044510: ['FBtr0111144', 'FBtr0111147', 'FBtr0111146'] 2021-10-25 09:35:02.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033875: ['FBtr0087638'] 2021-10-25 09:35:02.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033875 has a single transcript. 2021-10-25 09:35:02.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033876: ['FBtr0087645'] 2021-10-25 09:35:02.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033876 has a single transcript. 2021-10-25 09:35:02.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8972627, 8972684), (8973401, 8973460), (8974071, 8974133), (8974347, 8974656)] 2021-10-25 09:35:02.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19329782, 19329841), (19330088, 19330240)] 2021-10-25 09:35:02.898 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19329841, 19330836, 'FBtr0306319_exon_2') contains intron (19330088, 19330240) 2021-10-25 09:35:02.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306319_exon_2'] 2021-10-25 09:35:02.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033879: ['FBtr0087644', 'FBtr0087643'] 2021-10-25 09:35:02.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7858448, 7858937), (7859051, 7859215), (7859437, 7862918), (7859437, 7864260), (7859437, 7861138), (7861729, 7862918), (7863056, 7864260), (7864434, 7864498), (7864434, 7864504), (7864677, 7864795), (7864914, 7865150), (7865430, 7865700), (7865761, 7868368), (7865761, 7868038), (7868372, 7870231), (7870348, 7871785), (7871916, 7872012), (7872118, 7885853), (7886168, 7886535), (7886168, 7886595), (7886168, 7886442)] 2021-10-25 09:35:02.913 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7885853, 7886733, 'FBtr0300826_exon_1') contains intron (7886168, 7886535) 2021-10-25 09:35:02.915 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7855586, 7859051, 'FBtr0333829_exon_15') contains intron (7858448, 7858937) 2021-10-25 09:35:02.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300826_exon_1', 'FBtr0333829_exon_15'] 2021-10-25 09:35:02.915 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030186: ['FBtr0071486'] 2021-10-25 09:35:02.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030186 has a single transcript. 2021-10-25 09:35:02.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24537313, 24537397), (24537616, 24542409), (24537616, 24537910)] 2021-10-25 09:35:02.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:02.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030187: ['FBtr0071484', 'FBtr0346336', 'FBtr0346337'] 2021-10-25 09:35:02.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13853115, 13853180), (13853905, 13854101), (13854224, 13854297)] 2021-10-25 09:35:02.949 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13854101, 13854331, 'FBtr0087644_exon_1') contains intron (13854224, 13854297) 2021-10-25 09:35:02.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087644_exon_1'] 2021-10-25 09:35:02.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:02.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086707: ['FBtr0081088'] 2021-10-25 09:35:02.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086707 has a single transcript. 2021-10-25 09:35:02.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262904: ['FBtr0306321', 'FBtr0306322'] 2021-10-25 09:35:02.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086708: ['FBtr0075806', 'FBtr0075807', 'FBtr0075808', 'FBtr0075809', 'FBtr0113425', 'FBtr0332078', 'FBtr0332079'] 2021-10-25 09:35:03.004 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10232224, 10232293), (10232596, 10233013)] 2021-10-25 09:35:03.005 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.005 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25903212, 25904218), (25904610, 25905969), (25906006, 25906071), (25906567, 25906661)] 2021-10-25 09:35:03.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033880: ['FBtr0087642'] 2021-10-25 09:35:03.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033880 has a single transcript. 2021-10-25 09:35:03.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033883: ['FBtr0087622', 'FBtr0339954'] 2021-10-25 09:35:03.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044511: ['FBtr0082764', 'FBtr0335459'] 2021-10-25 09:35:03.060 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13861290, 13861628)] 2021-10-25 09:35:03.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262905: ['FBtr0342869'] 2021-10-25 09:35:03.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262905 has a single transcript. 2021-10-25 09:35:03.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262937: ['FBtr0072663'] 2021-10-25 09:35:03.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262937 has a single transcript. 2021-10-25 09:35:03.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13381503, 13381562)] 2021-10-25 09:35:03.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262943: ['FBtr0306547'] 2021-10-25 09:35:03.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262943 has a single transcript. 2021-10-25 09:35:03.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030189: ['FBtr0071441'] 2021-10-25 09:35:03.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030189 has a single transcript. 2021-10-25 09:35:03.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030191: ['FBtr0071471', 'FBtr0330316'] 2021-10-25 09:35:03.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262944: ['FBtr0306546'] 2021-10-25 09:35:03.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262944 has a single transcript. 2021-10-25 09:35:03.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262945: ['FBtr0306548'] 2021-10-25 09:35:03.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262945 has a single transcript. 2021-10-25 09:35:03.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033884: ['FBtr0339953', 'FBtr0087586'] 2021-10-25 09:35:03.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262948: ['FBtr0306554'] 2021-10-25 09:35:03.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262948 has a single transcript. 2021-10-25 09:35:03.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13478482, 13481032), (13478482, 13481035), (13480602, 13481032), (13480602, 13481035), (13480914, 13481032), (13481135, 13481213), (13482369, 13482434)] 2021-10-25 09:35:03.131 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13481035, 13482369, 'FBtr0075808_exon_2') contains intron (13481135, 13481213) 2021-10-25 09:35:03.131 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13481035, 13482369, 'FBtr0113425_exon_2') contains intron (13481135, 13481213) 2021-10-25 09:35:03.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075808_exon_2', 'FBtr0113425_exon_2'] 2021-10-25 09:35:03.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262951: ['FBtr0306851'] 2021-10-25 09:35:03.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262951 has a single transcript. 2021-10-25 09:35:03.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10331488, 10331541), (10331491, 10331541)] 2021-10-25 09:35:03.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262952: ['FBtr0433500'] 2021-10-25 09:35:03.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262952 has a single transcript. 2021-10-25 09:35:03.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044809: ['FBtr0083974'] 2021-10-25 09:35:03.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044809 has a single transcript. 2021-10-25 09:35:03.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262954: ['FBtr0112379'] 2021-10-25 09:35:03.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262954 has a single transcript. 2021-10-25 09:35:03.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044810: ['FBtr0083985'] 2021-10-25 09:35:03.161 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044810 has a single transcript. 2021-10-25 09:35:03.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13862104, 13862166), (13862235, 13862297)] 2021-10-25 09:35:03.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262955: ['FBtr0082892', 'FBtr0344600'] 2021-10-25 09:35:03.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044811: ['FBtr0081310'] 2021-10-25 09:35:03.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044811 has a single transcript. 2021-10-25 09:35:03.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044812: ['FBtr0083972'] 2021-10-25 09:35:03.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044812 has a single transcript. 2021-10-25 09:35:03.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044817: ['FBtr0307297'] 2021-10-25 09:35:03.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044817 has a single transcript. 2021-10-25 09:35:03.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044823: ['FBtr0078739'] 2021-10-25 09:35:03.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044823 has a single transcript. 2021-10-25 09:35:03.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030195: ['FBtr0071445'] 2021-10-25 09:35:03.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030195 has a single transcript. 2021-10-25 09:35:03.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044826: ['FBtr0083312', 'FBtr0330047', 'FBtr0305003'] 2021-10-25 09:35:03.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030196: ['FBtr0071465', 'FBtr0333306', 'FBtr0346350'] 2021-10-25 09:35:03.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14125968, 14126095), (14128264, 14128339), (14129274, 14129333)] 2021-10-25 09:35:03.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037526: ['FBtr0081752', 'FBtr0333826'] 2021-10-25 09:35:03.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033885: ['FBtr0087615'] 2021-10-25 09:35:03.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033885 has a single transcript. 2021-10-25 09:35:03.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033886: ['FBtr0087610', 'FBtr0087611', 'FBtr0339958', 'FBtr0114493', 'FBtr0114494', 'FBtr0114495'] 2021-10-25 09:35:03.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004588: ['FBtr0075587'] 2021-10-25 09:35:03.262 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004588 has a single transcript. 2021-10-25 09:35:03.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004589: ['FBtr0075571', 'FBtr0303460'] 2021-10-25 09:35:03.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16447134, 16450966)] 2021-10-25 09:35:03.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10384426, 10384487), (10384882, 10384950)] 2021-10-25 09:35:03.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7887138, 7887207), (7887277, 7887339), (7888501, 7888562), (7888929, 7889095)] 2021-10-25 09:35:03.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262960: ['FBtr0306711', 'FBtr0306712', 'FBtr0306713', 'FBtr0345462'] 2021-10-25 09:35:03.291 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330047': ['FBtr0305003']} 2021-10-25 09:35:03.291 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0305003']] 2021-10-25 09:35:03.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15650008, 15650082), (15650283, 15650343)] 2021-10-25 09:35:03.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037529: ['FBtr0081766'] 2021-10-25 09:35:03.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037529 has a single transcript. 2021-10-25 09:35:03.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044871: ['FBtr0083661'] 2021-10-25 09:35:03.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044871 has a single transcript. 2021-10-25 09:35:03.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037530: ['FBtr0081765', 'FBtr0339713', 'FBtr0339714', 'FBtr0339715'] 2021-10-25 09:35:03.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0044872: ['FBtr0299926'] 2021-10-25 09:35:03.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0044872 has a single transcript. 2021-10-25 09:35:03.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045035: ['FBtr0110874'] 2021-10-25 09:35:03.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045035 has a single transcript. 2021-10-25 09:35:03.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030200: ['FBtr0071448'] 2021-10-25 09:35:03.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030200 has a single transcript. 2021-10-25 09:35:03.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045038: ['FBtr0079562', 'FBtr0343420'] 2021-10-25 09:35:03.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004590: ['FBtr0075586'] 2021-10-25 09:35:03.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17914768, 17914950), (17914798, 17914950), (17914835, 17914950)] 2021-10-25 09:35:03.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004590 has a single transcript. 2021-10-25 09:35:03.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.373 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030202: ['FBtr0071464'] 2021-10-25 09:35:03.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030202 has a single transcript. 2021-10-25 09:35:03.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004591: ['FBtr0075572'] 2021-10-25 09:35:03.386 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004591 has a single transcript. 2021-10-25 09:35:03.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13959099, 13959204), (13959398, 13959567), (13960109, 13960227), (13960109, 13960318)] 2021-10-25 09:35:03.390 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13958544, 13959398, 'FBtr0339958_exon_2') contains intron (13959099, 13959204) 2021-10-25 09:35:03.390 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13958544, 13959398, 'FBtr0114493_exon_3') contains intron (13959099, 13959204) 2021-10-25 09:35:03.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030204: ['FBtr0071462'] 2021-10-25 09:35:03.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030204 has a single transcript. 2021-10-25 09:35:03.391 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13958544, 13959398, 'FBtr0114494_exon_3') contains intron (13959099, 13959204) 2021-10-25 09:35:03.391 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339958_exon_2', 'FBtr0114493_exon_3', 'FBtr0114494_exon_3'] 2021-10-25 09:35:03.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004592: ['FBtr0075585'] 2021-10-25 09:35:03.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004592 has a single transcript. 2021-10-25 09:35:03.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030206: ['FBtr0071450', 'FBtr0307487'] 2021-10-25 09:35:03.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004593: ['FBtr0075584'] 2021-10-25 09:35:03.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004593 has a single transcript. 2021-10-25 09:35:03.412 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7866149, 7870266), (7870473, 7871170)] 2021-10-25 09:35:03.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004594: ['FBtr0075573'] 2021-10-25 09:35:03.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004594 has a single transcript. 2021-10-25 09:35:03.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086710: ['FBtr0302491', 'FBtr0081181', 'FBtr0340319'] 2021-10-25 09:35:03.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004595: ['FBtr0304603', 'FBtr0304604', 'FBtr0304605', 'FBtr0304606', 'FBtr0304607', 'FBtr0304608'] 2021-10-25 09:35:03.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7903593, 7903655), (7903889, 7903953), (7904124, 7904191), (7904344, 7904403), (7904605, 7904663), (7904741, 7904801), (7904996, 7905050), (7905385, 7905690), (7905385, 7905784), (7905711, 7905784), (7906097, 7906180), (7906327, 7906417), (7907060, 7907127)] 2021-10-25 09:35:03.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10474085, 10474788), (10475140, 10475201), (10475622, 10475680), (10476125, 10476182), (10476395, 10476607)] 2021-10-25 09:35:03.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045063: ['FBtr0087946', 'FBtr0087947', 'FBtr0339637', 'FBtr0346633'] 2021-10-25 09:35:03.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19008543, 19008948), (19009137, 19009204)] 2021-10-25 09:35:03.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030207: ['FBtr0071459'] 2021-10-25 09:35:03.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030207 has a single transcript. 2021-10-25 09:35:03.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030208: ['FBtr0071451', 'FBtr0071452', 'FBtr0071453', 'FBtr0336899'] 2021-10-25 09:35:03.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262961: ['FBtr0306714', 'FBtr0306715'] 2021-10-25 09:35:03.553 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12488694, 12488761), (12489080, 12489145), (12489881, 12489945), (12490454, 12490522), (12490705, 12504551), (12490705, 12491326), (12490705, 12506810)] 2021-10-25 09:35:03.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17255384, 17255442), (17255387, 17255442)] 2021-10-25 09:35:03.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.573 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11329956, 11339657), (11333553, 11339657), (11335622, 11339657), (11339706, 11370247), (11370292, 11371312), (11375838, 11376321), (11377217, 11378034), (11377276, 11378006), (11378189, 11391528), (11391673, 11391917)] 2021-10-25 09:35:03.574 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11371312, 11377217, 'FBtr0304604_exon_4') contains intron (11375838, 11376321) 2021-10-25 09:35:03.574 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11372787, 11377217, 'FBtr0304606_exon_1') contains intron (11375838, 11376321) 2021-10-25 09:35:03.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304604_exon_4', 'FBtr0304606_exon_1'] 2021-10-25 09:35:03.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086711: ['FBtr0080676', 'FBtr0111014', 'FBtr0111015', 'FBtr0332520', 'FBtr0332521'] 2021-10-25 09:35:03.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037531: ['FBtr0300685', 'FBtr0304704', 'FBtr0339711'] 2021-10-25 09:35:03.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10478969, 10479472), (10478969, 10479489), (10479717, 10479835), (10479717, 10479788), (10480024, 10480083)] 2021-10-25 09:35:03.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262962: ['FBtr0306717', 'FBtr0415453'] 2021-10-25 09:35:03.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033887: ['FBtr0087609', 'FBtr0345649'] 2021-10-25 09:35:03.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24830384, 24830448), (24830384, 24830438)] 2021-10-25 09:35:03.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7917794, 7917855), (7919277, 7919403), (7919801, 7919864), (7919801, 7919861), (7920122, 7920177)] 2021-10-25 09:35:03.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13970304, 13970353), (13970685, 13970740), (13970975, 13971042)] 2021-10-25 09:35:03.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045064: ['FBtr0081331', 'FBtr0331184'] 2021-10-25 09:35:03.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14976358, 14976491), (14977083, 14977214), (14977646, 14983949), (14977646, 14992306), (14984084, 14984195), (14984253, 14992306), (14992506, 14997515), (14992506, 14993898), (14994035, 14997515), (14994035, 14997270), (14994035, 14996713)] 2021-10-25 09:35:03.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262963: ['FBtr0306710'] 2021-10-25 09:35:03.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262963 has a single transcript. 2021-10-25 09:35:03.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033888: ['FBtr0087608', 'FBtr0345648'] 2021-10-25 09:35:03.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262964: ['FBtr0306709'] 2021-10-25 09:35:03.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262964 has a single transcript. 2021-10-25 09:35:03.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262965: ['FBtr0306716'] 2021-10-25 09:35:03.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262965 has a single transcript. 2021-10-25 09:35:03.742 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20066898, 20069047), (20069304, 20069376), (20069514, 20072353), (20072646, 20073377)] 2021-10-25 09:35:03.742 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20072353, 20073719, 'FBtr0081331_exon_4') contains intron (20072646, 20073377) 2021-10-25 09:35:03.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081331_exon_4'] 2021-10-25 09:35:03.743 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262966: ['FBtr0306718'] 2021-10-25 09:35:03.749 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262966 has a single transcript. 2021-10-25 09:35:03.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030215: ['FBtr0071512', 'FBtr0310297'] 2021-10-25 09:35:03.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262967: ['FBtr0347239', 'FBtr0347240'] 2021-10-25 09:35:03.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037533: ['FBtr0081824', 'FBtr0332157', 'FBtr0331342', 'FBtr0331344'] 2021-10-25 09:35:03.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:03.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10566498, 10566562), (10566498, 10566558)] 2021-10-25 09:35:03.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045073: ['FBtr0074159', 'FBtr0345134', 'FBtr0303567', 'FBtr0308705'] 2021-10-25 09:35:03.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7489483, 7489549), (7489725, 7491416), (7489725, 7493109), (7491610, 7493109)] 2021-10-25 09:35:03.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004597: ['FBtr0083010'] 2021-10-25 09:35:03.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004597 has a single transcript. 2021-10-25 09:35:03.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033889: ['FBtr0339957', 'FBtr0303989', 'FBtr0303990', 'FBtr0303991'] 2021-10-25 09:35:03.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004598: ['FBtr0074265', 'FBtr0074266', 'FBtr0074267', 'FBtr0074261', 'FBtr0074262', 'FBtr0074263', 'FBtr0074264', 'FBtr0301300', 'FBtr0301301'] 2021-10-25 09:35:03.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030217: ['FBtr0071491'] 2021-10-25 09:35:03.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030217 has a single transcript. 2021-10-25 09:35:03.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030218: ['FBtr0071510', 'FBtr0310444'] 2021-10-25 09:35:03.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7974865, 7975136), (7974865, 7975053), (7975059, 7975136), (7976413, 7976889), (7977068, 7977561), (7977675, 7977864), (7977675, 7977937), (7977962, 7978017), (7978080, 7978345)] 2021-10-25 09:35:03.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262968: ['FBtr0306719', 'FBtr0343183'] 2021-10-25 09:35:03.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086712: ['FBtr0088090'] 2021-10-25 09:35:03.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086712 has a single transcript. 2021-10-25 09:35:03.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10598934, 10599190), (10599296, 10601042), (10601715, 10602253)] 2021-10-25 09:35:03.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15934774, 15935294), (15935342, 15935416), (15936008, 15936075), (15936248, 15936318), (15936434, 15936798), (15937031, 15937590), (15937754, 15938231), (15937754, 15938757), (15938335, 15938757), (15939240, 15940399)] 2021-10-25 09:35:03.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7494847, 7494909), (7494851, 7494909), (7495048, 7495113), (7495274, 7495336)] 2021-10-25 09:35:03.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086757: ['FBtr0087666', 'FBtr0309886', 'FBtr0309887'] 2021-10-25 09:35:03.919 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13974410, 13974590), (13974837, 13974926), (13975203, 13975268), (13975374, 13975433), (13977304, 13977375), (13977580, 13977644), (13977849, 13978941), (13979117, 13979183), (13979418, 13980027), (13979418, 13979476), (13979943, 13980027)] 2021-10-25 09:35:03.920 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13979183, 13979603, 'FBtr0303989_exon_1') contains intron (13979418, 13979476) 2021-10-25 09:35:03.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303989_exon_1'] 2021-10-25 09:35:03.921 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030221: ['FBtr0071507'] 2021-10-25 09:35:03.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030221 has a single transcript. 2021-10-25 09:35:03.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262969: ['FBtr0306721', 'FBtr0345002'] 2021-10-25 09:35:03.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030222: ['FBtr0071506'] 2021-10-25 09:35:03.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030222 has a single transcript. 2021-10-25 09:35:03.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030223: ['FBtr0071492'] 2021-10-25 09:35:03.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030223 has a single transcript. 2021-10-25 09:35:03.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030224: ['FBtr0071504'] 2021-10-25 09:35:03.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030224 has a single transcript. 2021-10-25 09:35:03.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13450998, 13451089), (13451875, 13451927), (13452026, 13452321), (13452735, 13452790), (13453000, 13453088), (13453006, 13453088), (13453030, 13453088)] 2021-10-25 09:35:03.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:03.982 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:03.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030228: ['FBtr0071497', 'FBtr0334456'] 2021-10-25 09:35:03.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037534: ['FBtr0081823'] 2021-10-25 09:35:03.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037534 has a single transcript. 2021-10-25 09:35:04.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037535: ['FBtr0081783', 'FBtr0335224'] 2021-10-25 09:35:04.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18440951, 18441006), (18441178, 18441600)] 2021-10-25 09:35:04.006 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18441006, 18441871, 'FBtr0306721_exon_2') contains intron (18441178, 18441600) 2021-10-25 09:35:04.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306721_exon_2'] 2021-10-25 09:35:04.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045442: ['FBtr0082746'] 2021-10-25 09:35:04.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045442 has a single transcript. 2021-10-25 09:35:04.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045443: ['FBtr0332552', 'FBtr0332553'] 2021-10-25 09:35:04.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10769293, 10769347), (10769986, 10770054), (10770501, 10770562)] 2021-10-25 09:35:04.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16373174, 16374925), (16373187, 16374540), (16373187, 16374925), (16373357, 16374925), (16373423, 16374925), (16373834, 16374925), (16374760, 16374925), (16375859, 16375924), (16376029, 16376091), (16376167, 16376239), (16376340, 16376652), (16376349, 16376652), (16376787, 16376847), (16377007, 16377067), (16377371, 16377422), (16378646, 16378706), (16378894, 16378963), (16379120, 16379188), (16379463, 16379561), (16379847, 16379921), (16380121, 16380187), (16380475, 16380537), (16380761, 16380826)] 2021-10-25 09:35:04.047 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376349, 'FBtr0074265_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.048 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376340, 'FBtr0074266_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.049 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376340, 'FBtr0074267_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.049 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376349, 'FBtr0074261_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376340, 'FBtr0074262_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376349, 'FBtr0074263_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376340, 'FBtr0074264_exon_5') contains intron (16376167, 16376239) 2021-10-25 09:35:04.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16376091, 16376340, 'FBtr0301300_exon_4') contains intron (16376167, 16376239) 2021-10-25 09:35:04.052 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16377067, 16378646, 'FBtr0301300_exon_7') contains intron (16377371, 16377422) 2021-10-25 09:35:04.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074265_exon_4', 'FBtr0074266_exon_4', 'FBtr0074267_exon_4', 'FBtr0074261_exon_4', 'FBtr0074262_exon_4', 'FBtr0074263_exon_4', 'FBtr0074264_exon_5', 'FBtr0301300_exon_4', 'FBtr0301300_exon_7'] 2021-10-25 09:35:04.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8000503, 8000585), (8000663, 8000723)] 2021-10-25 09:35:04.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262970: ['FBtr0306722'] 2021-10-25 09:35:04.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262970 has a single transcript. 2021-10-25 09:35:04.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262971: ['FBtr0306726', 'FBtr0306727', 'FBtr0308067', 'FBtr0308068'] 2021-10-25 09:35:04.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033890: ['FBtr0087606'] 2021-10-25 09:35:04.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033890 has a single transcript. 2021-10-25 09:35:04.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086758: ['FBtr0307047', 'FBtr0077877', 'FBtr0077878', 'FBtr0303933', 'FBtr0303934', 'FBtr0303935'] 2021-10-25 09:35:04.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033891: ['FBtr0087595', 'FBtr0330625'] 2021-10-25 09:35:04.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10401545, 10401612), (10401760, 10401811), (10401997, 10402064), (10402325, 10402384), (10402553, 10402606), (10402801, 10402860)] 2021-10-25 09:35:04.100 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10401612, 10401997, 'FBtr0332552_exon_2') contains intron (10401760, 10401811) 2021-10-25 09:35:04.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332552_exon_2'] 2021-10-25 09:35:04.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030230: ['FBtr0071502', 'FBtr0301558', 'FBtr0332295', 'FBtr0332296'] 2021-10-25 09:35:04.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037536: ['FBtr0081784', 'FBtr0308075', 'FBtr0308076', 'FBtr0335225', 'FBtr0335226', 'FBtr0335227', 'FBtr0335228'] 2021-10-25 09:35:04.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13983584, 13983644), (13983823, 13983884), (13984140, 13984197)] 2021-10-25 09:35:04.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.139 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045468: ['FBtr0084158'] 2021-10-25 09:35:04.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045468 has a single transcript. 2021-10-25 09:35:04.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19921089, 19921140), (19921089, 19921186), (19921089, 19921136), (19921089, 19921149)] 2021-10-25 09:35:04.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045469: ['FBtr0084159'] 2021-10-25 09:35:04.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045469 has a single transcript. 2021-10-25 09:35:04.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045470: ['FBtr0290236'] 2021-10-25 09:35:04.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045470 has a single transcript. 2021-10-25 09:35:04.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045471: ['FBtr0083865'] 2021-10-25 09:35:04.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045471 has a single transcript. 2021-10-25 09:35:04.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045473: ['FBtr0082216'] 2021-10-25 09:35:04.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045473 has a single transcript. 2021-10-25 09:35:04.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10750094, 10750155), (10750362, 10750925), (10750370, 10750925), (10751782, 10751902), (10751782, 10753212), (10752249, 10752327), (10752249, 10753212), (10752495, 10753212), (10753676, 10757394), (10753676, 10754292), (10754904, 10754970), (10755014, 10757394)] 2021-10-25 09:35:04.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033893: ['FBtr0087599'] 2021-10-25 09:35:04.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033893 has a single transcript. 2021-10-25 09:35:04.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045474: ['FBtr0078281'] 2021-10-25 09:35:04.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045474 has a single transcript. 2021-10-25 09:35:04.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045476: ['FBtr0073199', 'FBtr0073200'] 2021-10-25 09:35:04.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033897: ['FBtr0087582', 'FBtr0087583', 'FBtr0087584', 'FBtr0339966', 'FBtr0310668', 'FBtr0310669', 'FBtr0310670', 'FBtr0310671'] 2021-10-25 09:35:04.235 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1651411, 1652774), (1651429, 1652774), (1651712, 1652774), (1653835, 1678868), (1653835, 1690116), (1667981, 1670143), (1667981, 1690116), (1670189, 1678868), (1678920, 1690116), (1690755, 1694223), (1694441, 1694546), (1695376, 1695438), (1695586, 1695648)] 2021-10-25 09:35:04.236 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.236 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.257 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4032388, 4032459), (4033096, 4033160), (4033413, 4033463), (4033852, 4033909), (4033852, 4033936), (4033977, 4034032), (4034107, 4034163), (4034550, 4034610), (4034885, 4034943), (4035098, 4035164), (4035327, 4035384), (4035474, 4035534)] 2021-10-25 09:35:04.258 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.258 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8001795, 8001894), (8002446, 8002553), (8003159, 8003219), (8003760, 8003975), (8003760, 8003987), (8003760, 8003999), (8004178, 8004237), (8004647, 8004713), (8004863, 8005009), (8004863, 8005253), (8005018, 8005253), (8005280, 8005756)] 2021-10-25 09:35:04.293 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8003219, 8004178, 'FBtr0308075_exon_4') contains intron (8003760, 8003975) 2021-10-25 09:35:04.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308075_exon_4'] 2021-10-25 09:35:04.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262972: ['FBtr0306728', 'FBtr0306729', 'FBtr0345159'] 2021-10-25 09:35:04.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045477: ['FBtr0073196', 'FBtr0309790'] 2021-10-25 09:35:04.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030234: ['FBtr0073376', 'FBtr0112975', 'FBtr0112976', 'FBtr0112977', 'FBtr0343639'] 2021-10-25 09:35:04.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4028723, 4028783), (4029173, 4029228), (4029389, 4029451), (4029729, 4029783), (4029949, 4030001), (4030091, 4030151), (4030496, 4030545), (4030740, 4030799), (4031436, 4031494), (4031747, 4031808)] 2021-10-25 09:35:04.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11250933, 11254557), (11255339, 11255521), (11255339, 11255434)] 2021-10-25 09:35:04.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11247630, 11255339, 'FBtr0345159_exon_2') contains intron (11250933, 11254557) 2021-10-25 09:35:04.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345159_exon_2'] 2021-10-25 09:35:04.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004606: ['FBtr0331180', 'FBtr0085702', 'FBtr0085701'] 2021-10-25 09:35:04.391 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14149179, 14149233), (14149818, 14150225), (14149818, 14149887), (14149953, 14150035), (14149953, 14150225), (14150095, 14150225), (14150454, 14150516), (14150962, 14151019), (14151546, 14151606), (14151926, 14152845), (14151926, 14152063), (14151926, 14152593)] 2021-10-25 09:35:04.392 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14149233, 14149953, 'FBtr0310668_exon_7') contains intron (14149818, 14149887) 2021-10-25 09:35:04.393 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14149233, 14149953, 'FBtr0310669_exon_7') contains intron (14149818, 14149887) 2021-10-25 09:35:04.393 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14149233, 14149953, 'FBtr0310670_exon_6') contains intron (14149818, 14149887) 2021-10-25 09:35:04.393 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14149233, 14149953, 'FBtr0310671_exon_6') contains intron (14149818, 14149887) 2021-10-25 09:35:04.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310668_exon_7', 'FBtr0310669_exon_7', 'FBtr0310670_exon_6', 'FBtr0310671_exon_6'] 2021-10-25 09:35:04.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045478: ['FBtr0073195'] 2021-10-25 09:35:04.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045478 has a single transcript. 2021-10-25 09:35:04.441 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10772626, 10772797), (10772626, 10772791), (10772626, 10772890), (10772842, 10772903), (10773166, 10777960), (10778128, 10778210)] 2021-10-25 09:35:04.442 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10772797, 10773166, 'FBtr0073376_exon_2') contains intron (10772842, 10772903) 2021-10-25 09:35:04.442 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10772791, 10773166, 'FBtr0112976_exon_2') contains intron (10772842, 10772903) 2021-10-25 09:35:04.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10772767, 10773166, 'FBtr0343639_exon_1') contains intron (10772842, 10772903) 2021-10-25 09:35:04.443 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073376_exon_2', 'FBtr0112976_exon_2', 'FBtr0343639_exon_1'] 2021-10-25 09:35:04.443 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045479: ['FBtr0073194'] 2021-10-25 09:35:04.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045479 has a single transcript. 2021-10-25 09:35:04.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30766380, 30773572), (30773736, 30773986), (30774697, 30783942), (30783650, 30783942), (30785941, 30786009)] 2021-10-25 09:35:04.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045482: ['FBtr0071965'] 2021-10-25 09:35:04.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045482 has a single transcript. 2021-10-25 09:35:04.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045483: ['FBtr0071964'] 2021-10-25 09:35:04.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045483 has a single transcript. 2021-10-25 09:35:04.467 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331180': ['FBtr0085701']} 2021-10-25 09:35:04.467 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0085701']] 2021-10-25 09:35:04.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045485: ['FBtr0080964'] 2021-10-25 09:35:04.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045485 has a single transcript. 2021-10-25 09:35:04.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045486: ['FBtr0080963'] 2021-10-25 09:35:04.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045486 has a single transcript. 2021-10-25 09:35:04.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045487: ['FBtr0080962'] 2021-10-25 09:35:04.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045487 has a single transcript. 2021-10-25 09:35:04.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086768: ['FBtr0078758', 'FBtr0339519'] 2021-10-25 09:35:04.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045495: ['FBtr0079458', 'FBtr0079459', 'FBtr0079460', 'FBtr0079461', 'FBtr0079462'] 2021-10-25 09:35:04.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262974: ['FBtr0344658'] 2021-10-25 09:35:04.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262974 has a single transcript. 2021-10-25 09:35:04.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262975: ['FBtr0306744', 'FBtr0306745', 'FBtr0306746', 'FBtr0306747', 'FBtr0306748', 'FBtr0306749', 'FBtr0306750', 'FBtr0306751', 'FBtr0306752', 'FBtr0306753', 'FBtr0306754', 'FBtr0306755', 'FBtr0330372', 'FBtr0336455', 'FBtr0308226', 'FBtr0308227'] 2021-10-25 09:35:04.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004607: ['FBtr0307167', 'FBtr0089070', 'FBtr0332913'] 2021-10-25 09:35:04.534 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5553045, 5553270), (5553045, 5553225), (5553675, 5553930), (5554067, 5554128)] 2021-10-25 09:35:04.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037537: ['FBtr0081822'] 2021-10-25 09:35:04.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037537 has a single transcript. 2021-10-25 09:35:04.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037538: ['FBtr0081785'] 2021-10-25 09:35:04.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037538 has a single transcript. 2021-10-25 09:35:04.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037539: ['FBtr0081820'] 2021-10-25 09:35:04.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037539 has a single transcript. 2021-10-25 09:35:04.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7455136, 7455200), (7455761, 7455823), (7455761, 7458031), (7455761, 7456738), (7455761, 7459929), (7455761, 7461578)] 2021-10-25 09:35:04.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(501857, 503850), (504138, 515581), (515631, 521472), (523104, 524330), (524512, 524903), (526520, 529692), (531093, 531158), (531093, 531155), (531379, 531435), (531783, 532782), (531783, 532785), (532926, 532982), (535880, 537174), (535880, 536965), (537075, 537174), (537760, 538537), (538604, 538658)] 2021-10-25 09:35:04.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086778: ['FBtr0074680', 'FBtr0301834', 'FBtr0301835', 'FBtr0343798'] 2021-10-25 09:35:04.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037540: ['FBtr0081786'] 2021-10-25 09:35:04.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037540 has a single transcript. 2021-10-25 09:35:04.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037541: ['FBtr0081817', 'FBtr0081818', 'FBtr0300916', 'FBtr0300917', 'FBtr0335229', 'FBtr0335230'] 2021-10-25 09:35:04.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030237: ['FBtr0073378'] 2021-10-25 09:35:04.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030237 has a single transcript. 2021-10-25 09:35:04.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030239: ['FBtr0073379'] 2021-10-25 09:35:04.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030239 has a single transcript. 2021-10-25 09:35:04.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030240: ['FBtr0073380'] 2021-10-25 09:35:04.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030240 has a single transcript. 2021-10-25 09:35:04.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030241: ['FBtr0073410'] 2021-10-25 09:35:04.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030241 has a single transcript. 2021-10-25 09:35:04.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030242: ['FBtr0073409', 'FBtr0346273'] 2021-10-25 09:35:04.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19329720, 19329789), (19329933, 19330100), (19330254, 19331251), (19331368, 19331487), (19331642, 19334414), (19334524, 19340502), (19340589, 19341845), (19342040, 19342281), (19342357, 19342418), (19342599, 19342727), (19342837, 19342899), (19342944, 19343117), (19343257, 19343496), (19344150, 19347637), (19344150, 19344904), (19344989, 19347637), (19347733, 19347835)] 2021-10-25 09:35:04.700 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19347637, 19348447, 'FBtr0074680_exon_1') contains intron (19347733, 19347835) 2021-10-25 09:35:04.701 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19328553, 19329933, 'FBtr0301835_exon_14') contains intron (19329720, 19329789) 2021-10-25 09:35:04.701 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19347637, 19348447, 'FBtr0301835_exon_1') contains intron (19347733, 19347835) 2021-10-25 09:35:04.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074680_exon_1', 'FBtr0301835_exon_14', 'FBtr0301835_exon_1'] 2021-10-25 09:35:04.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004611: ['FBtr0078049', 'FBtr0078050', 'FBtr0078047', 'FBtr0078048', 'FBtr0330673', 'FBtr0330674'] 2021-10-25 09:35:04.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:04.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033899: ['FBtr0087519'] 2021-10-25 09:35:04.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033899 has a single transcript. 2021-10-25 09:35:04.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033900: ['FBtr0087580', 'FBtr0339965'] 2021-10-25 09:35:04.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8017005, 8017439), (8017005, 8018207), (8017460, 8018207), (8021949, 8022617), (8021949, 8022456), (8022489, 8022617), (8022891, 8022952), (8024593, 8024652), (8025069, 8026776), (8025069, 8030644)] 2021-10-25 09:35:04.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045497: ['FBtr0077888'] 2021-10-25 09:35:04.781 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045497 has a single transcript. 2021-10-25 09:35:04.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030243: ['FBtr0073381', 'FBtr0332961'] 2021-10-25 09:35:04.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045498: ['FBtr0310114'] 2021-10-25 09:35:04.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045498 has a single transcript. 2021-10-25 09:35:04.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14161091, 14161150)] 2021-10-25 09:35:04.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.790 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045500: ['FBtr0100188'] 2021-10-25 09:35:04.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045500 has a single transcript. 2021-10-25 09:35:04.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045501: ['FBtr0077897'] 2021-10-25 09:35:04.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045501 has a single transcript. 2021-10-25 09:35:04.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045502: ['FBtr0346793'] 2021-10-25 09:35:04.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045502 has a single transcript. 2021-10-25 09:35:04.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045759: ['FBtr0076900'] 2021-10-25 09:35:04.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045759 has a single transcript. 2021-10-25 09:35:04.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10857935, 10858287), (10858379, 10858444), (10859125, 10859197), (10859404, 10859599), (10860897, 10860961), (10861090, 10861817)] 2021-10-25 09:35:04.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045761: ['FBtr0113352'] 2021-10-25 09:35:04.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045761 has a single transcript. 2021-10-25 09:35:04.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045770: ['FBtr0076286', 'FBtr0334098', 'FBtr0334099'] 2021-10-25 09:35:04.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033901: ['FBtr0087520', 'FBtr0339959'] 2021-10-25 09:35:04.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(306389, 317742), (310605, 317742), (318120, 325677), (325824, 334119), (334257, 335414), (335548, 336017), (336203, 336348), (336546, 337937), (336546, 337015), (337198, 337937), (338118, 339206), (339441, 340709), (340855, 342578), (342792, 342865), (343729, 344023), (343729, 344038), (343729, 344041), (344489, 344554), (344489, 344575), (344947, 345008), (345153, 345214), (347936, 355383)] 2021-10-25 09:35:04.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086779: ['FBtr0085910', 'FBtr0301616', 'FBtr0301617', 'FBtr0332471'] 2021-10-25 09:35:04.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23187803, 23187876), (23189129, 23191695), (23189129, 23189187), (23189129, 23189205), (23189129, 23190346), (23189129, 23191022), (23189129, 23190839), (23191783, 23191840), (23192281, 23193025), (23192281, 23197286), (23197835, 23197899), (23197976, 23200152), (23197976, 23209341), (23209420, 23209607), (23209883, 23214425), (23209883, 23217878), (23209883, 23222796), (23219249, 23220416), (23220643, 23221845), (23220643, 23221761), (23220896, 23221845), (23223120, 23226444), (23223120, 23226453), (23223120, 23226440)] 2021-10-25 09:35:04.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030244: ['FBtr0073382', 'FBtr0339835'] 2021-10-25 09:35:04.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10465410, 10466184)] 2021-10-25 09:35:04.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14161580, 14161635)] 2021-10-25 09:35:04.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.920 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0306748': ['FBtr0330372']} 2021-10-25 09:35:04.921 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330372']] 2021-10-25 09:35:04.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10869391, 10869736), (10870103, 10870182), (10870109, 10870182)] 2021-10-25 09:35:04.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:04.938 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:04.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033902: ['FBtr0087579', 'FBtr0339964'] 2021-10-25 09:35:04.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21741735, 21741794), (21742008, 21742074), (21742280, 21742523), (21742698, 21742775), (21742875, 21742972), (21743071, 21743838), (21743971, 21756553), (21743971, 21746151), (21747332, 21753218), (21753426, 21753687), (21753814, 21756553), (21756627, 21757163)] 2021-10-25 09:35:04.963 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21753218, 21753723, 'FBtr0301617_exon_1') contains intron (21753426, 21753687) 2021-10-25 09:35:04.963 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21753218, 21753814, 'FBtr0332471_exon_3') contains intron (21753426, 21753687) 2021-10-25 09:35:04.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301617_exon_1', 'FBtr0332471_exon_3'] 2021-10-25 09:35:04.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030245: ['FBtr0073406', 'FBtr0073407', 'FBtr0073408', 'FBtr0346382', 'FBtr0339836'] 2021-10-25 09:35:05.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037543: ['FBtr0081787', 'FBtr0310411'] 2021-10-25 09:35:05.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045800: ['FBtr0086842', 'FBtr0333558'] 2021-10-25 09:35:05.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14164136, 14164190), (14164370, 14164486)] 2021-10-25 09:35:05.009 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8030549, 8030925), (8030982, 8031045), (8031083, 8031145), (8031711, 8031781)] 2021-10-25 09:35:05.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17699168, 17699350), (17699444, 17699857), (17699449, 17699857), (17699897, 17700080), (17700185, 17700381), (17700433, 17700634), (17700703, 17700900), (17700942, 17701133), (17701192, 17701368), (17701414, 17701595), (17701649, 17701833), (17701894, 17702074), (17702125, 17702314), (17702369, 17702546), (17702598, 17702778), (17702841, 17703020), (17703064, 17703243)] 2021-10-25 09:35:05.049 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033903: ['FBtr0087521'] 2021-10-25 09:35:05.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033903 has a single transcript. 2021-10-25 09:35:05.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033904: ['FBtr0087522', 'FBtr0332918'] 2021-10-25 09:35:05.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037544: ['FBtr0081816', 'FBtr0347360'] 2021-10-25 09:35:05.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10870844, 10870903), (10871465, 10871528), (10872039, 10877414), (10873055, 10873135), (10873479, 10873544), (10873708, 10877414), (10875170, 10875240), (10875587, 10875802), (10875996, 10877414), (10875999, 10877414)] 2021-10-25 09:35:05.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045823: ['FBtr0076398', 'FBtr0076399', 'FBtr0076400', 'FBtr0076401', 'FBtr0330097'] 2021-10-25 09:35:05.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004618: ['FBtr0083584', 'FBtr0083585', 'FBtr0330042'] 2021-10-25 09:35:05.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086782: ['FBtr0074802'] 2021-10-25 09:35:05.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086782 has a single transcript. 2021-10-25 09:35:05.136 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14167339, 14167418), (14167554, 14167663)] 2021-10-25 09:35:05.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086784: ['FBtr0088716', 'FBtr0088715', 'FBtr0301639', 'FBtr0339341'] 2021-10-25 09:35:05.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:05.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033905: ['FBtr0087523', 'FBtr0087524'] 2021-10-25 09:35:05.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18368946, 18369342), (18370835, 18371318), (18371449, 18371732), (18371869, 18372516)] 2021-10-25 09:35:05.194 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18367926, 18370835, 'FBtr0083585_exon_4') contains intron (18368946, 18369342) 2021-10-25 09:35:05.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083585_exon_4'] 2021-10-25 09:35:05.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037546: ['FBtr0081789', 'FBtr0344726'] 2021-10-25 09:35:05.208 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083584': ['FBtr0330042']} 2021-10-25 09:35:05.208 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330042']] 2021-10-25 09:35:05.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8729879, 8730063), (8730688, 8730748), (8731612, 8731680), (8731811, 8731921), (8731811, 8732159), (8731963, 8732159), (8732405, 8732464), (8732618, 8732675), (8732880, 8733791), (8732880, 8733301)] 2021-10-25 09:35:05.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9714399, 9714505), (9714623, 9715743), (9714623, 9715746)] 2021-10-25 09:35:05.230 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9714323, 9714623, 'FBtr0076398_exon_1') contains intron (9714399, 9714505) 2021-10-25 09:35:05.231 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9714323, 9714623, 'FBtr0076400_exon_1') contains intron (9714399, 9714505) 2021-10-25 09:35:05.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076398_exon_1', 'FBtr0076400_exon_1'] 2021-10-25 09:35:05.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.248 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076399': ['FBtr0330097']} 2021-10-25 09:35:05.248 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330097']] 2021-10-25 09:35:05.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8059527, 8082190), (8082496, 8082708), (8083151, 8083219), (8084143, 8084935)] 2021-10-25 09:35:05.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14169103, 14169386), (14169522, 14169569)] 2021-10-25 09:35:05.251 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8083219, 8087049, 'FBtr0081789_exon_4') contains intron (8084143, 8084935) 2021-10-25 09:35:05.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081789_exon_4'] 2021-10-25 09:35:05.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14168785, 14169522, 'FBtr0087524_exon_1') contains intron (14169103, 14169386) 2021-10-25 09:35:05.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087524_exon_1'] 2021-10-25 09:35:05.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004619: ['FBtr0076982'] 2021-10-25 09:35:05.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004619 has a single transcript. 2021-10-25 09:35:05.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004620: ['FBtr0079106'] 2021-10-25 09:35:05.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004620 has a single transcript. 2021-10-25 09:35:05.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004622: ['FBtr0085507', 'FBtr0301656', 'FBtr0330298'] 2021-10-25 09:35:05.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033906: ['FBtr0087525', 'FBtr0302451', 'FBtr0302452', 'FBtr0302453'] 2021-10-25 09:35:05.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037547: ['FBtr0081790', 'FBtr0339720'] 2021-10-25 09:35:05.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030246: ['FBtr0073403', 'FBtr0339768'] 2021-10-25 09:35:05.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29951690, 29951772), (29951696, 29951772), (29951838, 29951902), (29952042, 29953289), (29953486, 29954053), (29954204, 29955028), (29955244, 29956534), (29956709, 29959030), (29959257, 29961688), (29962030, 29968982)] 2021-10-25 09:35:05.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8087712, 8087785), (8088011, 8088077), (8088589, 8088643), (8088769, 8088820), (8089093, 8089148)] 2021-10-25 09:35:05.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10895577, 10895645), (10895847, 10895907), (10896869, 10896934), (10898221, 10898281), (10899063, 10899123)] 2021-10-25 09:35:05.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.373 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085507': ['FBtr0330298']} 2021-10-25 09:35:05.434 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330298']] 2021-10-25 09:35:05.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045827: ['FBtr0080802', 'FBtr0346121', 'FBtr0332228'] 2021-10-25 09:35:05.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086785: ['FBtr0075818'] 2021-10-25 09:35:05.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086785 has a single transcript. 2021-10-25 09:35:05.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086855: ['FBtr0300804', 'FBtr0330648', 'FBtr0330649', 'FBtr0330650'] 2021-10-25 09:35:05.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14170722, 14172289), (14171451, 14172289), (14172226, 14172289), (14172522, 14172583), (14172683, 14172746)] 2021-10-25 09:35:05.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030247: ['FBtr0073383', 'FBtr0339767', 'FBtr0346271'] 2021-10-25 09:35:05.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037548: ['FBtr0113204'] 2021-10-25 09:35:05.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037548 has a single transcript. 2021-10-25 09:35:05.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037549: ['FBtr0113205'] 2021-10-25 09:35:05.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037549 has a single transcript. 2021-10-25 09:35:05.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004623: ['FBtr0074949'] 2021-10-25 09:35:05.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004623 has a single transcript. 2021-10-25 09:35:05.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037550: ['FBtr0081815', 'FBtr0339725'] 2021-10-25 09:35:05.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004629: ['FBtr0082980'] 2021-10-25 09:35:05.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004629 has a single transcript. 2021-10-25 09:35:05.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16005015, 16005087)] 2021-10-25 09:35:05.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004635: ['FBtr0072694', 'FBtr0333207'] 2021-10-25 09:35:05.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(275251, 275318), (276497, 276738), (276897, 276958), (276903, 276958), (276903, 276973)] 2021-10-25 09:35:05.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.558 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10900062, 10900129)] 2021-10-25 09:35:05.558 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8125943, 8126004), (8126165, 8126228), (8126251, 8126312)] 2021-10-25 09:35:05.561 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.561 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.570 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1464130, 1465465), (1465822, 1466489), (1466907, 1467039)] 2021-10-25 09:35:05.571 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.571 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262976: ['FBtr0307286', 'FBtr0307287', 'FBtr0302081', 'FBtr0071248'] 2021-10-25 09:35:05.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033907: ['FBtr0087578'] 2021-10-25 09:35:05.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033907 has a single transcript. 2021-10-25 09:35:05.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037551: ['FBtr0081794', 'FBtr0339723', 'FBtr0339724'] 2021-10-25 09:35:05.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045842: ['FBtr0080709', 'FBtr0080711', 'FBtr0080712', 'FBtr0300932', 'FBtr0336862', 'FBtr0336863', 'FBtr0415451', 'FBtr0415452'] 2021-10-25 09:35:05.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033911: ['FBtr0087577'] 2021-10-25 09:35:05.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033911 has a single transcript. 2021-10-25 09:35:05.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004636: ['FBtr0072867', 'FBtr0303154', 'FBtr0332671'] 2021-10-25 09:35:05.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033912: ['FBtr0339970', 'FBtr0087575'] 2021-10-25 09:35:05.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030251: ['FBtr0073387', 'FBtr0343591'] 2021-10-25 09:35:05.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14215702, 14215950), (14216110, 14216529)] 2021-10-25 09:35:05.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8126842, 8128040), (8128195, 8128261), (8128423, 8128489)] 2021-10-25 09:35:05.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1861676, 1861929), (1861676, 1862060)] 2021-10-25 09:35:05.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10927644, 10927711), (10928759, 10928836), (10929266, 10929391)] 2021-10-25 09:35:05.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8408324, 8408387), (8408446, 8408518), (8408778, 8409662), (8408778, 8408864), (8408778, 8409402)] 2021-10-25 09:35:05.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086856: ['FBtr0078128', 'FBtr0343777'] 2021-10-25 09:35:05.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033913: ['FBtr0087532', 'FBtr0087533', 'FBtr0087534'] 2021-10-25 09:35:05.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:05.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030257: ['FBtr0073390', 'FBtr0073391', 'FBtr0331720'] 2021-10-25 09:35:05.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037552: ['FBtr0081795'] 2021-10-25 09:35:05.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037552 has a single transcript. 2021-10-25 09:35:05.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037553: ['FBtr0300896', 'FBtr0302178'] 2021-10-25 09:35:05.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15257586, 15257798), (15258105, 15258172), (15258441, 15258503), (15258709, 15258781), (15258938, 15259018), (15258938, 15261717), (15259291, 15259350), (15261637, 15261717), (15261840, 15261911), (15262000, 15262069), (15262012, 15262069), (15262304, 15262374), (15262626, 15262712), (15262626, 15262969), (15263128, 15263331), (15263664, 15263769), (15264095, 15264150), (15264118, 15264461)] 2021-10-25 09:35:05.813 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15263769, 15264227, 'FBtr0080709_exon_1') contains intron (15264095, 15264150) 2021-10-25 09:35:05.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004638: ['FBtr0087694', 'FBtr0087695', 'FBtr0087696', 'FBtr0087697', 'FBtr0087698'] 2021-10-25 09:35:05.814 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15263769, 15264692, 'FBtr0080711_exon_1') contains intron (15264095, 15264150) 2021-10-25 09:35:05.814 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15263769, 15264227, 'FBtr0300932_exon_1') contains intron (15264095, 15264150) 2021-10-25 09:35:05.814 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15262374, 15262802, 'FBtr0336862_exon_1') contains intron (15262626, 15262712) 2021-10-25 09:35:05.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086895: ['FBtr0087518'] 2021-10-25 09:35:05.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086895 has a single transcript. 2021-10-25 09:35:05.815 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080709_exon_1', 'FBtr0080711_exon_1', 'FBtr0300932_exon_1', 'FBtr0336862_exon_1'] 2021-10-25 09:35:05.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14220042, 14220586), (14220042, 14220607), (14220765, 14227410), (14229295, 14229412)] 2021-10-25 09:35:05.818 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14219897, 14220765, 'FBtr0087534_exon_1') contains intron (14220042, 14220586) 2021-10-25 09:35:05.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087534_exon_1'] 2021-10-25 09:35:05.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086898: ['FBtr0088249', 'FBtr0088250'] 2021-10-25 09:35:05.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11045135, 11047250), (11045148, 11047250), (11048296, 11048478), (11048601, 11048941), (11049135, 11049190)] 2021-10-25 09:35:05.837 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11048478, 11049135, 'FBtr0073391_exon_3') contains intron (11048601, 11048941) 2021-10-25 09:35:05.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073391_exon_3'] 2021-10-25 09:35:05.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262979: ['FBtr0344596'] 2021-10-25 09:35:05.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262979 has a single transcript. 2021-10-25 09:35:05.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262980: ['FBtr0306816'] 2021-10-25 09:35:05.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262980 has a single transcript. 2021-10-25 09:35:05.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262981: ['FBtr0344563'] 2021-10-25 09:35:05.857 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262981 has a single transcript. 2021-10-25 09:35:05.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8221859, 8221919)] 2021-10-25 09:35:05.863 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8220145, 8222167, 'FBtr0302178_exon_1') contains intron (8221859, 8221919) 2021-10-25 09:35:05.864 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302178_exon_1'] 2021-10-25 09:35:05.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262982: ['FBtr0306818'] 2021-10-25 09:35:05.865 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262982 has a single transcript. 2021-10-25 09:35:05.871 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10818493, 10818548), (10818974, 10819040), (10819103, 10819291), (10819103, 10819688)] 2021-10-25 09:35:05.872 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.872 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262983: ['FBtr0306819', 'FBtr0347150', 'FBtr0346061'] 2021-10-25 09:35:05.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037554: ['FBtr0081797', 'FBtr0081798', 'FBtr0339606'] 2021-10-25 09:35:05.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033915: ['FBtr0087569', 'FBtr0087571', 'FBtr0087572'] 2021-10-25 09:35:05.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086900: ['FBtr0112465'] 2021-10-25 09:35:05.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086900 has a single transcript. 2021-10-25 09:35:05.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14236738, 14236801), (14236952, 14244473), (14236952, 14237572)] 2021-10-25 09:35:05.936 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086904: ['FBtr0087858', 'FBtr0087859', 'FBtr0087860', 'FBtr0345195'] 2021-10-25 09:35:05.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030258: ['FBtr0073396', 'FBtr0073397', 'FBtr0346272'] 2021-10-25 09:35:05.938 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13497151, 13497367), (13497533, 13497612), (13497732, 13497791), (13497889, 13501812), (13501924, 13502690), (13502091, 13502759), (13502091, 13502690), (13502091, 13502788)] 2021-10-25 09:35:05.939 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8233562, 8234250), (8233646, 8234250), (8233924, 8234250), (8235222, 8235286)] 2021-10-25 09:35:05.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:05.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:05.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14236775, 14236838), (14237504, 14237574), (14237701, 14237756), (14237882, 14237947), (14238314, 14238375), (14238551, 14238629), (14238848, 14238915), (14239190, 14239375), (14239190, 14239450)] 2021-10-25 09:35:05.995 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14238915, 14239420, 'FBtr0087572_exon_1') contains intron (14239190, 14239375) 2021-10-25 09:35:05.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087572_exon_1'] 2021-10-25 09:35:05.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11052857, 11053072), (11052857, 11053033), (11053187, 11053337)] 2021-10-25 09:35:06.001 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12760521, 12760800), (12760521, 12760804), (12760521, 12760726)] 2021-10-25 09:35:06.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262984: ['FBtr0306820'] 2021-10-25 09:35:06.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262984 has a single transcript. 2021-10-25 09:35:06.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262985: ['FBtr0306821', 'FBtr0306822'] 2021-10-25 09:35:06.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037555: ['FBtr0081807', 'FBtr0100368', 'FBtr0334315'] 2021-10-25 09:35:06.094 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6185309, 6185380), (6185630, 6185703), (6185644, 6185703)] 2021-10-25 09:35:06.095 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.096 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030259: ['FBtr0299600'] 2021-10-25 09:35:06.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030259 has a single transcript. 2021-10-25 09:35:06.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033916: ['FBtr0087535'] 2021-10-25 09:35:06.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033916 has a single transcript. 2021-10-25 09:35:06.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030260: ['FBtr0073394'] 2021-10-25 09:35:06.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030260 has a single transcript. 2021-10-25 09:35:06.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033917: ['FBtr0087536'] 2021-10-25 09:35:06.117 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033917 has a single transcript. 2021-10-25 09:35:06.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004643: ['FBtr0070441'] 2021-10-25 09:35:06.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030261: ['FBtr0073392', 'FBtr0346297'] 2021-10-25 09:35:06.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004643 has a single transcript. 2021-10-25 09:35:06.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045843: ['FBtr0081580', 'FBtr0081581'] 2021-10-25 09:35:06.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004644: ['FBtr0100506'] 2021-10-25 09:35:06.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004644 has a single transcript. 2021-10-25 09:35:06.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033918: ['FBtr0087538'] 2021-10-25 09:35:06.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033918 has a single transcript. 2021-10-25 09:35:06.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004646: ['FBtr0071036', 'FBtr0071037', 'FBtr0309873', 'FBtr0309874', 'FBtr0309875', 'FBtr0334881'] 2021-10-25 09:35:06.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033919: ['FBtr0339968', 'FBtr0301203', 'FBtr0301204'] 2021-10-25 09:35:06.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262986: ['FBtr0306823', 'FBtr0306824'] 2021-10-25 09:35:06.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7286424, 7286560), (7287368, 7287488)] 2021-10-25 09:35:06.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8238035, 8238102), (8238182, 8238730), (8238252, 8238730), (8239606, 8240309)] 2021-10-25 09:35:06.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11066732, 11066815), (11066930, 11067775)] 2021-10-25 09:35:06.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11958322, 11958372)] 2021-10-25 09:35:06.200 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11958290, 11958909, 'FBtr0306824_exon_1') contains intron (11958322, 11958372) 2021-10-25 09:35:06.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306824_exon_1'] 2021-10-25 09:35:06.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086906: ['FBtr0309042', 'FBtr0072848', 'FBtr0332674', 'FBtr0332675', 'FBtr0332676', 'FBtr0332677', 'FBtr0332678', 'FBtr0332679', 'FBtr0332680', 'FBtr0332681', 'FBtr0332682', 'FBtr0332683', 'FBtr0332684'] 2021-10-25 09:35:06.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030262: ['FBtr0073427', 'FBtr0346279'] 2021-10-25 09:35:06.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14261920, 14261979), (14262171, 14262474), (14263529, 14263589), (14263795, 14263863), (14264063, 14264128), (14264215, 14267734), (14264215, 14267698), (14264215, 14267338)] 2021-10-25 09:35:06.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045852: ['FBtr0305620', 'FBtr0305621', 'FBtr0332015', 'FBtr0332016', 'FBtr0332017'] 2021-10-25 09:35:06.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262987: ['FBtr0306825'] 2021-10-25 09:35:06.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262987 has a single transcript. 2021-10-25 09:35:06.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037556: ['FBtr0081806', 'FBtr0306301'] 2021-10-25 09:35:06.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262988: ['FBtr0306826'] 2021-10-25 09:35:06.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262988 has a single transcript. 2021-10-25 09:35:06.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11089452, 11089520), (11089659, 11089725)] 2021-10-25 09:35:06.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6974652, 6974730), (6975083, 6975150), (6975306, 6976022), (6976130, 6977158), (6977588, 6980858), (6977588, 6991240), (6977588, 6983512), (6977588, 6977787), (6977588, 6981188), (6981462, 6983512), (6984502, 6985530)] 2021-10-25 09:35:06.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262989: ['FBtr0306827'] 2021-10-25 09:35:06.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262989 has a single transcript. 2021-10-25 09:35:06.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262990: ['FBtr0306828'] 2021-10-25 09:35:06.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262990 has a single transcript. 2021-10-25 09:35:06.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262991: ['FBtr0306829', 'FBtr0306830', 'FBtr0306831'] 2021-10-25 09:35:06.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8242576, 8242679), (8242846, 8242917), (8243164, 8243221), (8243522, 8243639)] 2021-10-25 09:35:06.308 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8243221, 8243792, 'FBtr0081806_exon_1') contains intron (8243522, 8243639) 2021-10-25 09:35:06.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081806_exon_1'] 2021-10-25 09:35:06.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030263: ['FBtr0073428', 'FBtr0346280'] 2021-10-25 09:35:06.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033921: ['FBtr0087562'] 2021-10-25 09:35:06.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033921 has a single transcript. 2021-10-25 09:35:06.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033924: ['FBtr0087546'] 2021-10-25 09:35:06.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033924 has a single transcript. 2021-10-25 09:35:06.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18764642, 18764850), (18765813, 18769034), (18769191, 18771252), (18771397, 18776148), (18771397, 18771585), (18776374, 18776471), (18776374, 18779804), (18776603, 18779804), (18780331, 18782276), (18780331, 18792251), (18780331, 18787177)] 2021-10-25 09:35:06.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15663550, 15663826), (15663550, 15665553), (15664275, 15664344), (15664862, 15665129)] 2021-10-25 09:35:06.349 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15664344, 15665386, 'FBtr0306830_exon_1') contains intron (15664862, 15665129) 2021-10-25 09:35:06.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033925: ['FBtr0087561'] 2021-10-25 09:35:06.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306830_exon_1'] 2021-10-25 09:35:06.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033925 has a single transcript. 2021-10-25 09:35:06.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037560: ['FBtr0310082', 'FBtr0300631'] 2021-10-25 09:35:06.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033926: ['FBtr0087560'] 2021-10-25 09:35:06.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033926 has a single transcript. 2021-10-25 09:35:06.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033927: ['FBtr0305617'] 2021-10-25 09:35:06.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033927 has a single transcript. 2021-10-25 09:35:06.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11090798, 11090865), (11090977, 11091050), (11091192, 11091290), (11091627, 11091724), (11091857, 11091920)] 2021-10-25 09:35:06.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033928: ['FBtr0087547'] 2021-10-25 09:35:06.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033928 has a single transcript. 2021-10-25 09:35:06.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033929: ['FBtr0087548', 'FBtr0087549', 'FBtr0087550', 'FBtr0305616'] 2021-10-25 09:35:06.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8261550, 8261800), (8261599, 8261800)] 2021-10-25 09:35:06.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030266: ['FBtr0073481'] 2021-10-25 09:35:06.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030266 has a single transcript. 2021-10-25 09:35:06.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030268: ['FBtr0073475', 'FBtr0073476', 'FBtr0073477', 'FBtr0073478', 'FBtr0073479', 'FBtr0346270'] 2021-10-25 09:35:06.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037561: ['FBtr0081866'] 2021-10-25 09:35:06.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037561 has a single transcript. 2021-10-25 09:35:06.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262992: ['FBtr0306832'] 2021-10-25 09:35:06.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262992 has a single transcript. 2021-10-25 09:35:06.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037562: ['FBtr0081829'] 2021-10-25 09:35:06.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037562 has a single transcript. 2021-10-25 09:35:06.460 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262993: ['FBtr0306833', 'FBtr0306834'] 2021-10-25 09:35:06.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037563: ['FBtr0081865', 'FBtr0332542'] 2021-10-25 09:35:06.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14363078, 14363251), (14363078, 14363244), (14363121, 14363244), (14363513, 14363575), (14363914, 14363972), (14364935, 14364995), (14365171, 14365226)] 2021-10-25 09:35:06.487 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14363093, 14363513, 'FBtr0087550_exon_1') contains intron (14363121, 14363244) 2021-10-25 09:35:06.488 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087550_exon_1'] 2021-10-25 09:35:06.488 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004647: ['FBtr0070507', 'FBtr0304659'] 2021-10-25 09:35:06.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9338635, 9338724)] 2021-10-25 09:35:06.498 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9338222, 9339992, 'FBtr0306833_exon_1') contains intron (9338635, 9338724) 2021-10-25 09:35:06.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306833_exon_1'] 2021-10-25 09:35:06.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8289594, 8289747), (8290435, 8290497)] 2021-10-25 09:35:06.511 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8289394, 8290435, 'FBtr0081865_exon_2') contains intron (8289594, 8289747) 2021-10-25 09:35:06.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081865_exon_2'] 2021-10-25 09:35:06.512 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2040572, 2040775), (2041078, 2041138), (2041333, 2041392), (2041497, 2041565), (2041497, 2041709), (2041586, 2041709), (2042015, 2042090), (2043106, 2043240), (2043382, 2043448), (2045116, 2045195), (2045116, 2046281), (2046164, 2046281), (2046533, 2046593), (2046635, 2046857), (2051996, 2062046), (2051996, 2078962), (2051996, 2052654), (2061531, 2062046), (2062271, 2070071), (2062271, 2062453), (2069914, 2078962), (2069914, 2070071), (2075684, 2076382), (2075684, 2078962), (2076424, 2076629), (2076690, 2076901), (2077962, 2078035), (2078140, 2078962), (2079037, 2093760), (2079037, 2079372), (2079037, 2079239), (2079302, 2079372), (2079676, 2079735), (2079803, 2081688), (2079803, 2080163), (2081390, 2081688), (2087184, 2090999), (2091129, 2091247), (2092559, 2092620), (2092969, 2093760), (2093947, 2094007), (2094179, 2094275), (2094507, 2094572), (2094860, 2094925), (2100484, 2100564), (2103363, 2103427), (2104792, 2104854), (2105084, 2105149), (2106734, 2106867), (2106734, 2114125), (2106912, 2114125), (2114466, 2115399)] 2021-10-25 09:35:06.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3135827, 3147974), (3148065, 3155926), (3156189, 3156259), (3156464, 3159102), (3159233, 3163478), (3169627, 3169721), (3170031, 3170103), (3170559, 3170634)] 2021-10-25 09:35:06.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045862: ['FBtr0085221', 'FBtr0085220', 'FBtr0330084', 'FBtr0330085'] 2021-10-25 09:35:06.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262994: ['FBtr0306836', 'FBtr0306837'] 2021-10-25 09:35:06.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037565: ['FBtr0081864', 'FBtr0306805', 'FBtr0306806', 'FBtr0332541'] 2021-10-25 09:35:06.581 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11131300, 11132550), (11133363, 11133439), (11133686, 11134879), (11136095, 11136866), (11136095, 11136239), (11136095, 11136618)] 2021-10-25 09:35:06.582 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11134879, 11136423, 'FBtr0073479_exon_1') contains intron (11136095, 11136239) 2021-10-25 09:35:06.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073479_exon_1'] 2021-10-25 09:35:06.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8197595, 8197678)] 2021-10-25 09:35:06.603 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8197319, 8197711, 'FBtr0306837_exon_1') contains intron (8197595, 8197678) 2021-10-25 09:35:06.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306837_exon_1'] 2021-10-25 09:35:06.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004648: ['FBtr0070084', 'FBtr0070081', 'FBtr0070086', 'FBtr0070085', 'FBtr0070087', 'FBtr0340146', 'FBtr0290016', 'FBtr0290017', 'FBtr0344737', 'FBtr0344738', 'FBtr0344739'] 2021-10-25 09:35:06.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27700391, 27700465), (27700525, 27700598)] 2021-10-25 09:35:06.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27700424, 27703445, 'FBtr0085221_exon_1') contains intron (27700525, 27700598) 2021-10-25 09:35:06.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27700363, 27700525, 'FBtr0085220_exon_1') contains intron (27700391, 27700465) 2021-10-25 09:35:06.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27700363, 27700525, 'FBtr0330085_exon_1') contains intron (27700391, 27700465) 2021-10-25 09:35:06.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085221_exon_1', 'FBtr0085220_exon_1', 'FBtr0330085_exon_1'] 2021-10-25 09:35:06.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033931: ['FBtr0087556'] 2021-10-25 09:35:06.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033931 has a single transcript. 2021-10-25 09:35:06.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033932: ['FBtr0087485'] 2021-10-25 09:35:06.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033932 has a single transcript. 2021-10-25 09:35:06.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033933: ['FBtr0087486'] 2021-10-25 09:35:06.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033933 has a single transcript. 2021-10-25 09:35:06.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262995: ['FBtr0306835'] 2021-10-25 09:35:06.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262995 has a single transcript. 2021-10-25 09:35:06.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033934: ['FBtr0087517', 'FBtr0339990'] 2021-10-25 09:35:06.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262996: ['FBtr0306838'] 2021-10-25 09:35:06.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262996 has a single transcript. 2021-10-25 09:35:06.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8296145, 8296204), (8296325, 8296393), (8296655, 8296714), (8297030, 8297083), (8297313, 8297372), (8297520, 8297581), (8297947, 8298016), (8298073, 8298142), (8298193, 8298272), (8298686, 8298745), (8298909, 8298968), (8299226, 8299287), (8299948, 8300723), (8299948, 8300848), (8299948, 8300863)] 2021-10-25 09:35:06.676 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8298016, 8298193, 'FBtr0081864_exon_6') contains intron (8298073, 8298142) 2021-10-25 09:35:06.677 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8298016, 8298193, 'FBtr0306805_exon_6') contains intron (8298073, 8298142) 2021-10-25 09:35:06.677 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8298016, 8298193, 'FBtr0306806_exon_6') contains intron (8298073, 8298142) 2021-10-25 09:35:06.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081864_exon_6', 'FBtr0306805_exon_6', 'FBtr0306806_exon_6'] 2021-10-25 09:35:06.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262998: ['FBtr0306840'] 2021-10-25 09:35:06.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262998 has a single transcript. 2021-10-25 09:35:06.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0262999: ['FBtr0306842'] 2021-10-25 09:35:06.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0262999 has a single transcript. 2021-10-25 09:35:06.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263000: ['FBtr0306843', 'FBtr0342705'] 2021-10-25 09:35:06.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14409739, 14409800), (14410418, 14410724), (14411284, 14411342)] 2021-10-25 09:35:06.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20562770, 20562826), (20562770, 20562822)] 2021-10-25 09:35:06.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033935: ['FBtr0087487'] 2021-10-25 09:35:06.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033935 has a single transcript. 2021-10-25 09:35:06.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045866: ['FBtr0084758'] 2021-10-25 09:35:06.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045866 has a single transcript. 2021-10-25 09:35:06.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0045980: ['FBtr0084737'] 2021-10-25 09:35:06.781 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0045980 has a single transcript. 2021-10-25 09:35:06.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033936: ['FBtr0087488', 'FBtr0345529'] 2021-10-25 09:35:06.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046113: ['FBtr0336969'] 2021-10-25 09:35:06.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046113 has a single transcript. 2021-10-25 09:35:06.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046114: ['FBtr0084336', 'FBtr0334605'] 2021-10-25 09:35:06.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030269: ['FBtr0073437', 'FBtr0330387'] 2021-10-25 09:35:06.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263001: ['FBtr0306844'] 2021-10-25 09:35:06.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263001 has a single transcript. 2021-10-25 09:35:06.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037566: ['FBtr0081832'] 2021-10-25 09:35:06.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037566 has a single transcript. 2021-10-25 09:35:06.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263002: ['FBtr0306845'] 2021-10-25 09:35:06.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263002 has a single transcript. 2021-10-25 09:35:06.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037569: ['FBtr0081861'] 2021-10-25 09:35:06.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037569 has a single transcript. 2021-10-25 09:35:06.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263004: ['FBtr0306848'] 2021-10-25 09:35:06.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263004 has a single transcript. 2021-10-25 09:35:06.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:06.833 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.833 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037570: ['FBtr0081860', 'FBtr0306794'] 2021-10-25 09:35:06.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263005: ['FBtr0306847', 'FBtr0346130'] 2021-10-25 09:35:06.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:06.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.855 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:06.856 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.856 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(496548, 496600), (497389, 501984), (499450, 499848), (500608, 501984), (500974, 501984), (502220, 502286), (502766, 502835), (502936, 504667), (504785, 504915), (506242, 506307), (506531, 506598), (507806, 507868)] 2021-10-25 09:35:06.864 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (496445, 497389, 'FBtr0070084_exon_1') contains intron (496548, 496600) 2021-10-25 09:35:06.864 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (506598, 509072, 'FBtr0070084_exon_8') contains intron (507806, 507868) 2021-10-25 09:35:06.864 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (506598, 509072, 'FBtr0070081_exon_9') contains intron (507806, 507868) 2021-10-25 09:35:06.865 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (496445, 497389, 'FBtr0070085_exon_1') contains intron (496548, 496600) 2021-10-25 09:35:06.865 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (496445, 497389, 'FBtr0290016_exon_1') contains intron (496548, 496600) 2021-10-25 09:35:06.866 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (506598, 509072, 'FBtr0344738_exon_8') contains intron (507806, 507868) 2021-10-25 09:35:06.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070084_exon_1', 'FBtr0070084_exon_8', 'FBtr0070081_exon_9', 'FBtr0070085_exon_1', 'FBtr0290016_exon_1', 'FBtr0344738_exon_8'] 2021-10-25 09:35:06.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.868 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073437': ['FBtr0330387']} 2021-10-25 09:35:06.869 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330387']] 2021-10-25 09:35:06.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13097155, 13097222), (13097718, 13097780), (13098383, 13098436), (13098592, 13100884), (13101541, 13111633)] 2021-10-25 09:35:06.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8309906, 8309962), (8310113, 8310518)] 2021-10-25 09:35:06.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030270: ['FBtr0073473', 'FBtr0307189'] 2021-10-25 09:35:06.881 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8308880, 8310778, 'FBtr0081860_exon_1') contains intron (8309906, 8309962) 2021-10-25 09:35:06.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081860_exon_1'] 2021-10-25 09:35:06.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033942: ['FBtr0087514'] 2021-10-25 09:35:06.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033942 has a single transcript. 2021-10-25 09:35:06.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033943: ['FBtr0087496', 'FBtr0339977', 'FBtr0339978'] 2021-10-25 09:35:06.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046214: ['FBtr0084775', 'FBtr0084776', 'FBtr0084777', 'FBtr0113354'] 2021-10-25 09:35:06.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11140728, 11140789), (11141168, 11141805)] 2021-10-25 09:35:06.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037571: ['FBtr0081859'] 2021-10-25 09:35:06.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037571 has a single transcript. 2021-10-25 09:35:06.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037572: ['FBtr0081833'] 2021-10-25 09:35:06.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037572 has a single transcript. 2021-10-25 09:35:06.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263006: ['FBtr0072212', 'FBtr0072213', 'FBtr0072215', 'FBtr0072211', 'FBtr0072214', 'FBtr0072217', 'FBtr0072216', 'FBtr0072218', 'FBtr0343281'] 2021-10-25 09:35:06.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037573: ['FBtr0081834'] 2021-10-25 09:35:06.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037573 has a single transcript. 2021-10-25 09:35:06.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037574: ['FBtr0081858'] 2021-10-25 09:35:06.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037574 has a single transcript. 2021-10-25 09:35:06.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037576: ['FBtr0081836'] 2021-10-25 09:35:06.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14591229, 14592548), (14592077, 14592142), (14592881, 14592950), (14593043, 14593213)] 2021-10-25 09:35:06.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037576 has a single transcript. 2021-10-25 09:35:06.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:06.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:06.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037577: ['FBtr0081837', 'FBtr0344289'] 2021-10-25 09:35:06.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030271: ['FBtr0073438', 'FBtr0307187'] 2021-10-25 09:35:06.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25123479, 25123631), (25123483, 25123631), (25124115, 25124589)] 2021-10-25 09:35:06.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25123444, 25124115, 'FBtr0084776_exon_1') contains intron (25123479, 25123631) 2021-10-25 09:35:06.991 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084776_exon_1'] 2021-10-25 09:35:06.991 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8324433, 8324485), (8324573, 8324650), (8324573, 8324626)] 2021-10-25 09:35:07.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11142773, 11143061), (11143194, 11143258)] 2021-10-25 09:35:07.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033945: ['FBtr0301735'] 2021-10-25 09:35:07.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033945 has a single transcript. 2021-10-25 09:35:07.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037578: ['FBtr0081854'] 2021-10-25 09:35:07.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037578 has a single transcript. 2021-10-25 09:35:07.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033948: ['FBtr0087500'] 2021-10-25 09:35:07.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033948 has a single transcript. 2021-10-25 09:35:07.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037579: ['FBtr0081839'] 2021-10-25 09:35:07.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037579 has a single transcript. 2021-10-25 09:35:07.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033949: ['FBtr0087499'] 2021-10-25 09:35:07.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033949 has a single transcript. 2021-10-25 09:35:07.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030272: ['FBtr0073439'] 2021-10-25 09:35:07.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030272 has a single transcript. 2021-10-25 09:35:07.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037580: ['FBtr0081840', 'FBtr0081841'] 2021-10-25 09:35:07.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033950: ['FBtr0087484'] 2021-10-25 09:35:07.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033950 has a single transcript. 2021-10-25 09:35:07.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030274: ['FBtr0073440', 'FBtr0343038', 'FBtr0331740', 'FBtr0331741'] 2021-10-25 09:35:07.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033951: ['FBtr0087433', 'FBtr0339980'] 2021-10-25 09:35:07.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046222: ['FBtr0078713', 'FBtr0078714'] 2021-10-25 09:35:07.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8344483, 8345092), (8344483, 8344808), (8345023, 8345092), (8345399, 8345458)] 2021-10-25 09:35:07.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14645309, 14645373), (14645556, 14645613)] 2021-10-25 09:35:07.151 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14645269, 14645556, 'FBtr0087433_exon_1') contains intron (14645309, 14645373) 2021-10-25 09:35:07.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087433_exon_1'] 2021-10-25 09:35:07.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.157 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23927181, 23929313), (23927742, 23929313), (23929431, 23929499), (23929617, 23929681), (23929918, 23929982), (23930098, 23930157), (23932329, 23932405), (23932488, 23932573), (23932591, 23932666), (23932814, 23935579), (23932814, 23933258), (23932814, 23933690), (23932814, 23935824), (23932814, 23933908)] 2021-10-25 09:35:07.158 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23932666, 23933444, 'FBtr0072215_exon_1') contains intron (23932814, 23933258) 2021-10-25 09:35:07.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23927481, 23929431, 'FBtr0072216_exon_9') contains intron (23927742, 23929313) 2021-10-25 09:35:07.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23932666, 23933444, 'FBtr0072218_exon_1') contains intron (23932814, 23933258) 2021-10-25 09:35:07.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23932666, 23933444, 'FBtr0343281_exon_1') contains intron (23932814, 23933258) 2021-10-25 09:35:07.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072215_exon_1', 'FBtr0072216_exon_9', 'FBtr0072218_exon_1', 'FBtr0343281_exon_1'] 2021-10-25 09:35:07.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.188 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11149851, 11149924), (11149960, 11150635), (11150114, 11150635), (11150204, 11150635), (11152127, 11152237)] 2021-10-25 09:35:07.189 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.189 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5660825, 5660924), (5660825, 5660911), (5661248, 5661538), (5661808, 5661865), (5662017, 5663062), (5663160, 5663216), (5663343, 5663418), (5663652, 5663717), (5663929, 5663992)] 2021-10-25 09:35:07.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037581: ['FBtr0081842', 'FBtr0302314'] 2021-10-25 09:35:07.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033952: ['FBtr0087482'] 2021-10-25 09:35:07.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033952 has a single transcript. 2021-10-25 09:35:07.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086907: ['FBtr0080888', 'FBtr0335141'] 2021-10-25 09:35:07.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033953: ['FBtr0087481'] 2021-10-25 09:35:07.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033953 has a single transcript. 2021-10-25 09:35:07.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033954: ['FBtr0087480'] 2021-10-25 09:35:07.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033954 has a single transcript. 2021-10-25 09:35:07.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033955: ['FBtr0339981', 'FBtr0339982', 'FBtr0300764', 'FBtr0300765'] 2021-10-25 09:35:07.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046225: ['FBtr0082392', 'FBtr0082393', 'FBtr0339376'] 2021-10-25 09:35:07.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8347635, 8347777), (8348624, 8348678)] 2021-10-25 09:35:07.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16716217, 16719125)] 2021-10-25 09:35:07.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037583: ['FBtr0081853'] 2021-10-25 09:35:07.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037583 has a single transcript. 2021-10-25 09:35:07.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11438099, 11464026), (11463759, 11464026)] 2021-10-25 09:35:07.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037584: ['FBtr0301759'] 2021-10-25 09:35:07.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004649: ['FBtr0073897', 'FBtr0073898'] 2021-10-25 09:35:07.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037584 has a single transcript. 2021-10-25 09:35:07.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086908: ['FBtr0112777'] 2021-10-25 09:35:07.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086908 has a single transcript. 2021-10-25 09:35:07.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030276: ['FBtr0073443', 'FBtr0073444', 'FBtr0073441'] 2021-10-25 09:35:07.327 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14668438, 14668498), (14669100, 14669267), (14669518, 14669586), (14669522, 14669586), (14669923, 14669973), (14669923, 14669982), (14670590, 14670651), (14671144, 14671208)] 2021-10-25 09:35:07.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037589: ['FBtr0445396'] 2021-10-25 09:35:07.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037589 has a single transcript. 2021-10-25 09:35:07.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086909: ['FBtr0081092', 'FBtr0081093', 'FBtr0344023', 'FBtr0445413'] 2021-10-25 09:35:07.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037590: ['FBtr0081900'] 2021-10-25 09:35:07.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037590 has a single transcript. 2021-10-25 09:35:07.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037591: ['FBtr0081899'] 2021-10-25 09:35:07.344 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037591 has a single transcript. 2021-10-25 09:35:07.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037592: ['FBtr0081869', 'FBtr0310047', 'FBtr0310048'] 2021-10-25 09:35:07.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14193751, 14194012), (14194426, 14194497), (14197047, 14197109), (14199544, 14199621)] 2021-10-25 09:35:07.366 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14197109, 14199958, 'FBtr0073897_exon_4') contains intron (14199544, 14199621) 2021-10-25 09:35:07.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073897_exon_4'] 2021-10-25 09:35:07.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11154665, 11155033), (11155228, 11161060), (11160548, 11161060), (11161251, 11161317), (11161718, 11161782), (11162012, 11162085), (11162197, 11162268), (11162454, 11162515)] 2021-10-25 09:35:07.399 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8518391, 8519605), (8519169, 8519605), (8519238, 8519605), (8520549, 8520603), (8520744, 8520801), (8520968, 8521028)] 2021-10-25 09:35:07.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046247: ['FBtr0085159', 'FBtr0085160', 'FBtr0085161', 'FBtr0085162', 'FBtr0334729'] 2021-10-25 09:35:07.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18677472, 18678838), (18679161, 18682264), (18682389, 18682444), (18683300, 18683369)] 2021-10-25 09:35:07.431 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18682444, 18683715, 'FBtr0081092_exon_4') contains intron (18683300, 18683369) 2021-10-25 09:35:07.432 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18682444, 18683715, 'FBtr0081093_exon_3') contains intron (18683300, 18683369) 2021-10-25 09:35:07.432 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18682444, 18683715, 'FBtr0445413_exon_4') contains intron (18683300, 18683369) 2021-10-25 09:35:07.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081092_exon_4', 'FBtr0081093_exon_3', 'FBtr0445413_exon_4'] 2021-10-25 09:35:07.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004650: ['FBtr0070207'] 2021-10-25 09:35:07.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004650 has a single transcript. 2021-10-25 09:35:07.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004652: ['FBtr0083648', 'FBtr0083649', 'FBtr0083650', 'FBtr0083651', 'FBtr0083652', 'FBtr0083640', 'FBtr0083641', 'FBtr0083642', 'FBtr0083643', 'FBtr0083644', 'FBtr0083645', 'FBtr0083646', 'FBtr0083647', 'FBtr0301284', 'FBtr0330040'] 2021-10-25 09:35:07.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033958: ['FBtr0087476', 'FBtr0309056'] 2021-10-25 09:35:07.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030277: ['FBtr0073467', 'FBtr0346269'] 2021-10-25 09:35:07.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037594: ['FBtr0081872'] 2021-10-25 09:35:07.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037594 has a single transcript. 2021-10-25 09:35:07.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14741362, 14741466), (14742669, 14743053), (14743708, 14743770), (14744192, 14745197)] 2021-10-25 09:35:07.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037601: ['FBtr0081893', 'FBtr0344337'] 2021-10-25 09:35:07.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27275011, 27275390), (27275011, 27275176), (27275785, 27276292), (27276503, 27276569)] 2021-10-25 09:35:07.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.546 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:07.547 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263018: ['FBtr0306791'] 2021-10-25 09:35:07.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263018 has a single transcript. 2021-10-25 09:35:07.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263019: ['FBtr0306897', 'FBtr0306898', 'FBtr0306899'] 2021-10-25 09:35:07.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8643505, 8643560), (8644175, 8644225), (8644405, 8644468), (8644595, 8644647), (8644717, 8644771), (8645161, 8645216), (8645495, 8645609)] 2021-10-25 09:35:07.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033960: ['FBtr0087471', 'FBtr0087472', 'FBtr0087473', 'FBtr0289934'] 2021-10-25 09:35:07.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086912: ['FBtr0078139'] 2021-10-25 09:35:07.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086912 has a single transcript. 2021-10-25 09:35:07.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086913: ['FBtr0112677', 'FBtr0112678', 'FBtr0301529', 'FBtr0331794', 'FBtr0331795', 'FBtr0345428'] 2021-10-25 09:35:07.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030278: ['FBtr0073445'] 2021-10-25 09:35:07.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030278 has a single transcript. 2021-10-25 09:35:07.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030280: ['FBtr0073446', 'FBtr0343040'] 2021-10-25 09:35:07.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037602: ['FBtr0081878'] 2021-10-25 09:35:07.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037602 has a single transcript. 2021-10-25 09:35:07.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11958670, 11961927), (11962067, 11970256)] 2021-10-25 09:35:07.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11956229, 11962067, 'FBtr0306898_exon_2') contains intron (11958670, 11961927) 2021-10-25 09:35:07.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11952199, 11962067, 'FBtr0306899_exon_2') contains intron (11958670, 11961927) 2021-10-25 09:35:07.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306898_exon_2', 'FBtr0306899_exon_2'] 2021-10-25 09:35:07.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037603: ['FBtr0081879', 'FBtr0310655', 'FBtr0334317'] 2021-10-25 09:35:07.649 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:07.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.674 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14753890, 14753950), (14753890, 14753986), (14755590, 14755901), (14755590, 14756234)] 2021-10-25 09:35:07.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.675 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030283: ['FBtr0073447'] 2021-10-25 09:35:07.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030283 has a single transcript. 2021-10-25 09:35:07.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8652889, 8652974), (8653285, 8653358), (8653285, 8653355), (8653477, 8653545)] 2021-10-25 09:35:07.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030286: ['FBtr0073448'] 2021-10-25 09:35:07.714 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030286 has a single transcript. 2021-10-25 09:35:07.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046253: ['FBtr0273227'] 2021-10-25 09:35:07.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046253 has a single transcript. 2021-10-25 09:35:07.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030289: ['FBtr0307491', 'FBtr0290227'] 2021-10-25 09:35:07.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046258: ['FBtr0085217'] 2021-10-25 09:35:07.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046258 has a single transcript. 2021-10-25 09:35:07.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263020: ['FBtr0306900', 'FBtr0306901'] 2021-10-25 09:35:07.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046294: ['FBtr0300762'] 2021-10-25 09:35:07.738 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046294 has a single transcript. 2021-10-25 09:35:07.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21320631, 21327587), (21320631, 21332602), (21322585, 21327587), (21328269, 21329798), (21328269, 21332602), (21329909, 21332602), (21332711, 21333153), (21333264, 21333349), (21333494, 21333895)] 2021-10-25 09:35:07.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046296: ['FBtr0075995'] 2021-10-25 09:35:07.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046296 has a single transcript. 2021-10-25 09:35:07.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046297: ['FBtr0308944', 'FBtr0344884'] 2021-10-25 09:35:07.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11346162, 11346228)] 2021-10-25 09:35:07.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.765 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12241330, 12241384), (12241524, 12241588)] 2021-10-25 09:35:07.778 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12241217, 12241524, 'FBtr0306900_exon_1') contains intron (12241330, 12241384) 2021-10-25 09:35:07.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306900_exon_1'] 2021-10-25 09:35:07.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21803566, 21803614), (21803566, 21803621)] 2021-10-25 09:35:07.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.809 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18417300, 18430831), (18423182, 18430831), (18427166, 18430831), (18430964, 18432563), (18432034, 18432563), (18432818, 18434234), (18435062, 18435369), (18435570, 18435642), (18435790, 18513450), (18435790, 18478063), (18435790, 18446700), (18435790, 18463266), (18435790, 18515051), (18435790, 18503845), (18435790, 18506493), (18435790, 18438699), (18435790, 18450234), (18463281, 18515051), (18478332, 18480327), (18515343, 18545112)] 2021-10-25 09:35:07.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.814 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037606: ['FBtr0081880', 'FBtr0334318'] 2021-10-25 09:35:07.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033961: ['FBtr0087440'] 2021-10-25 09:35:07.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033961 has a single transcript. 2021-10-25 09:35:07.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030290: ['FBtr0073450'] 2021-10-25 09:35:07.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030290 has a single transcript. 2021-10-25 09:35:07.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030291: ['FBtr0073451'] 2021-10-25 09:35:07.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030291 has a single transcript. 2021-10-25 09:35:07.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033963: ['FBtr0087469', 'FBtr0329881'] 2021-10-25 09:35:07.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263021: ['FBtr0306902'] 2021-10-25 09:35:07.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263021 has a single transcript. 2021-10-25 09:35:07.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030292: ['FBtr0073452'] 2021-10-25 09:35:07.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030292 has a single transcript. 2021-10-25 09:35:07.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263022: ['FBtr0306903'] 2021-10-25 09:35:07.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263022 has a single transcript. 2021-10-25 09:35:07.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030293: ['FBtr0073453', 'FBtr0340049', 'FBtr0340050'] 2021-10-25 09:35:07.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263023: ['FBtr0306904'] 2021-10-25 09:35:07.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263023 has a single transcript. 2021-10-25 09:35:07.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046301: ['FBtr0078448'] 2021-10-25 09:35:07.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046301 has a single transcript. 2021-10-25 09:35:07.858 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083640': ['FBtr0330040']} 2021-10-25 09:35:07.858 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330040']] 2021-10-25 09:35:07.861 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8664749, 8665436), (8665842, 8665897), (8666672, 8666734), (8666855, 8666913)] 2021-10-25 09:35:07.862 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263024: ['FBtr0306923'] 2021-10-25 09:35:07.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263024 has a single transcript. 2021-10-25 09:35:07.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046302: ['FBtr0081183', 'FBtr0340320'] 2021-10-25 09:35:07.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263025: ['FBtr0306924'] 2021-10-25 09:35:07.872 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263025 has a single transcript. 2021-10-25 09:35:07.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14758606, 14758674), (14758619, 14758674), (14759425, 14759482)] 2021-10-25 09:35:07.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263026: ['FBtr0306925'] 2021-10-25 09:35:07.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263026 has a single transcript. 2021-10-25 09:35:07.881 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.881 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263027: ['FBtr0306926'] 2021-10-25 09:35:07.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263027 has a single transcript. 2021-10-25 09:35:07.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263029: ['FBtr0306907'] 2021-10-25 09:35:07.898 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263029 has a single transcript. 2021-10-25 09:35:07.907 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18993991, 18994136), (18995021, 18995601), (18995712, 18995778)] 2021-10-25 09:35:07.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263030: ['FBtr0306908', 'FBtr0306909', 'FBtr0345502'] 2021-10-25 09:35:07.920 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11350843, 11350993), (11351277, 11351690), (11353599, 11353656)] 2021-10-25 09:35:07.921 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11350607, 11351277, 'FBtr0073453_exon_1') contains intron (11350843, 11350993) 2021-10-25 09:35:07.921 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11351690, 11355300, 'FBtr0073453_exon_2') contains intron (11353599, 11353656) 2021-10-25 09:35:07.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037607: ['FBtr0081881', 'FBtr0081882', 'FBtr0081883'] 2021-10-25 09:35:07.921 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11351690, 11355539, 'FBtr0340049_exon_3') contains intron (11353599, 11353656) 2021-10-25 09:35:07.922 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11350607, 11351277, 'FBtr0340050_exon_1') contains intron (11350843, 11350993) 2021-10-25 09:35:07.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073453_exon_1', 'FBtr0073453_exon_2', 'FBtr0340049_exon_3', 'FBtr0340050_exon_1'] 2021-10-25 09:35:07.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033968: ['FBtr0087444', 'FBtr0087445'] 2021-10-25 09:35:07.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046323: ['FBtr0346720'] 2021-10-25 09:35:07.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046323 has a single transcript. 2021-10-25 09:35:07.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046332: ['FBtr0085784'] 2021-10-25 09:35:07.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046332 has a single transcript. 2021-10-25 09:35:07.973 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22655753, 22655822), (22656464, 22656616)] 2021-10-25 09:35:07.974 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.974 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046685: ['FBtr0084669'] 2021-10-25 09:35:07.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046685 has a single transcript. 2021-10-25 09:35:07.984 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8668036, 8669528), (8669928, 8671710), (8670905, 8671710), (8673309, 8673377)] 2021-10-25 09:35:07.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:07.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046687: ['FBtr0070848', 'FBtr0340222', 'FBtr0308339'] 2021-10-25 09:35:07.985 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14808478, 14808565), (14808643, 14809273), (14809523, 14809585)] 2021-10-25 09:35:07.988 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14808418, 14808643, 'FBtr0087445_exon_1') contains intron (14808478, 14808565) 2021-10-25 09:35:07.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087445_exon_1'] 2021-10-25 09:35:07.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:07.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086915: ['FBtr0078270'] 2021-10-25 09:35:07.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086915 has a single transcript. 2021-10-25 09:35:08.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086916: ['FBtr0334063'] 2021-10-25 09:35:08.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086916 has a single transcript. 2021-10-25 09:35:08.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0086917: ['FBtr0300207'] 2021-10-25 09:35:08.009 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0086917 has a single transcript. 2021-10-25 09:35:08.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087002: ['FBtr0089188', 'FBtr0334627', 'FBtr0345296', 'FBtr0345297'] 2021-10-25 09:35:08.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030294: ['FBtr0073456'] 2021-10-25 09:35:08.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030294 has a single transcript. 2021-10-25 09:35:08.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030296: ['FBtr0309222', 'FBtr0300849'] 2021-10-25 09:35:08.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033969: ['FBtr0087464'] 2021-10-25 09:35:08.049 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033969 has a single transcript. 2021-10-25 09:35:08.058 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5674152, 5674221), (5674173, 5674221), (5674709, 5674770), (5674873, 5674939), (5675040, 5675111), (5675257, 5675329), (5675484, 5679659), (5675484, 5676775)] 2021-10-25 09:35:08.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.059 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033970: ['FBtr0087446', 'FBtr0087447'] 2021-10-25 09:35:08.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11410129, 11410198), (11410393, 11410467), (11410393, 11410458)] 2021-10-25 09:35:08.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263031: ['FBtr0306910', 'FBtr0306911'] 2021-10-25 09:35:08.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037608: ['FBtr0081901'] 2021-10-25 09:35:08.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037608 has a single transcript. 2021-10-25 09:35:08.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037609: ['FBtr0081953'] 2021-10-25 09:35:08.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037609 has a single transcript. 2021-10-25 09:35:08.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037610: ['FBtr0081902'] 2021-10-25 09:35:08.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037610 has a single transcript. 2021-10-25 09:35:08.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037611: ['FBtr0081903', 'FBtr0337072'] 2021-10-25 09:35:08.107 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14832955, 14833171), (14833478, 14833534)] 2021-10-25 09:35:08.108 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14833171, 14833951, 'FBtr0087447_exon_2') contains intron (14833478, 14833534) 2021-10-25 09:35:08.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087447_exon_2'] 2021-10-25 09:35:08.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22655753, 22655822), (22656464, 22656616)] 2021-10-25 09:35:08.119 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.120 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1061136, 1065083), (1062919, 1065083), (1065022, 1065083), (1065183, 1065855), (1065885, 1065939), (1073105, 1073160), (1073381, 1073438), (1075557, 1075615), (1075736, 1075791)] 2021-10-25 09:35:08.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030297: ['FBtr0073550'] 2021-10-25 09:35:08.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030297 has a single transcript. 2021-10-25 09:35:08.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030298: ['FBtr0346792'] 2021-10-25 09:35:08.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030298 has a single transcript. 2021-10-25 09:35:08.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8677047, 8678272)] 2021-10-25 09:35:08.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046689: ['FBtr0083996'] 2021-10-25 09:35:08.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046689 has a single transcript. 2021-10-25 09:35:08.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030300: ['FBtr0073497', 'FBtr0073498'] 2021-10-25 09:35:08.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046692: ['FBtr0111111', 'FBtr0308810'] 2021-10-25 09:35:08.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033971: ['FBtr0087462', 'FBtr0329883'] 2021-10-25 09:35:08.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263032: ['FBtr0306912'] 2021-10-25 09:35:08.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263032 has a single transcript. 2021-10-25 09:35:08.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263033: ['FBtr0306913', 'FBtr0344871'] 2021-10-25 09:35:08.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11442708, 11443566), (11443412, 11443566)] 2021-10-25 09:35:08.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037612: ['FBtr0343149', 'FBtr0305337', 'FBtr0305338'] 2021-10-25 09:35:08.208 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4547054, 4560360), (4560789, 4562844), (4563081, 4564433)] 2021-10-25 09:35:08.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14847764, 14847815), (14847971, 14848199)] 2021-10-25 09:35:08.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.224 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087462': ['FBtr0329883']} 2021-10-25 09:35:08.225 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329883']] 2021-10-25 09:35:08.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:08.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033972: ['FBtr0087460'] 2021-10-25 09:35:08.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033972 has a single transcript. 2021-10-25 09:35:08.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033973: ['FBtr0087449'] 2021-10-25 09:35:08.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033973 has a single transcript. 2021-10-25 09:35:08.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033978: ['FBtr0087452'] 2021-10-25 09:35:08.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033978 has a single transcript. 2021-10-25 09:35:08.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046696: ['FBtr0085775', 'FBtr0433532'] 2021-10-25 09:35:08.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030301: ['FBtr0073499', 'FBtr0073500', 'FBtr0332619'] 2021-10-25 09:35:08.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033979: ['FBtr0087453', 'FBtr0339984'] 2021-10-25 09:35:08.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8713770, 8713831), (8713770, 8713880), (8713770, 8714145), (8714053, 8714145)] 2021-10-25 09:35:08.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087005: ['FBtr0078825'] 2021-10-25 09:35:08.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0087005 has a single transcript. 2021-10-25 09:35:08.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263034: ['FBtr0306914'] 2021-10-25 09:35:08.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263034 has a single transcript. 2021-10-25 09:35:08.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263035: ['FBtr0306915'] 2021-10-25 09:35:08.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263035 has a single transcript. 2021-10-25 09:35:08.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087007: ['FBtr0273422', 'FBtr0273423', 'FBtr0273424', 'FBtr0273425', 'FBtr0273426', 'FBtr0273427', 'FBtr0273428', 'FBtr0308596'] 2021-10-25 09:35:08.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:08.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14878886, 14878950), (14878886, 14878940)] 2021-10-25 09:35:08.305 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.305 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263036: ['FBtr0306916'] 2021-10-25 09:35:08.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263036 has a single transcript. 2021-10-25 09:35:08.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263037: ['FBtr0306928'] 2021-10-25 09:35:08.320 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263037 has a single transcript. 2021-10-25 09:35:08.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11455191, 11455281), (11456487, 11456654), (11456487, 11456584), (11457764, 11458229)] 2021-10-25 09:35:08.326 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11455281, 11456619, 'FBtr0073500_exon_2') contains intron (11456487, 11456584) 2021-10-25 09:35:08.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073500_exon_2'] 2021-10-25 09:35:08.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263038: ['FBtr0306927'] 2021-10-25 09:35:08.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263038 has a single transcript. 2021-10-25 09:35:08.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263039: ['FBtr0306918', 'FBtr0333724', 'FBtr0333725'] 2021-10-25 09:35:08.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046697: ['FBtr0346721'] 2021-10-25 09:35:08.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046697 has a single transcript. 2021-10-25 09:35:08.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033980: ['FBtr0300127'] 2021-10-25 09:35:08.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033980 has a single transcript. 2021-10-25 09:35:08.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046698: ['FBtr0346673'] 2021-10-25 09:35:08.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046698 has a single transcript. 2021-10-25 09:35:08.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033981: ['FBtr0087456'] 2021-10-25 09:35:08.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033981 has a single transcript. 2021-10-25 09:35:08.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033982: ['FBtr0087405', 'FBtr0344876', 'FBtr0345873'] 2021-10-25 09:35:08.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037613: ['FBtr0081949', 'FBtr0305339', 'FBtr0337074'] 2021-10-25 09:35:08.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046704: ['FBtr0079301', 'FBtr0079300', 'FBtr0329941', 'FBtr0329942', 'FBtr0329943'] 2021-10-25 09:35:08.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004654: ['FBtr0070384', 'FBtr0331410'] 2021-10-25 09:35:08.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:08.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030304: ['FBtr0073503', 'FBtr0346268'] 2021-10-25 09:35:08.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2145414, 2145489), (2145713, 2147174)] 2021-10-25 09:35:08.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8715668, 8715738), (8715815, 8718336)] 2021-10-25 09:35:08.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11477791, 11478383), (11478581, 11479013), (11479196, 11481524), (11482213, 11482309), (11482601, 11482697)] 2021-10-25 09:35:08.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14898478, 14899184)] 2021-10-25 09:35:08.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004655: ['FBtr0070429', 'FBtr0070430', 'FBtr0344159'] 2021-10-25 09:35:08.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030305: ['FBtr0073505'] 2021-10-25 09:35:08.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030305 has a single transcript. 2021-10-25 09:35:08.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14413510, 14413574), (14413715, 14414079), (14414494, 14414569), (14414698, 14414766), (14417195, 14426688), (14417195, 14438425), (14417195, 14476373), (14417195, 14507613), (14417195, 14426692), (14426911, 14427271), (14426911, 14427267), (14426911, 14427177), (14438468, 14448254), (14509919, 14510017), (14509919, 14510903), (14513270, 14533560), (14533722, 14536054), (14533722, 14536038)] 2021-10-25 09:35:08.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6724084, 6724826), (6724084, 6724177), (6724177, 6724826), (6724389, 6724826), (6724393, 6724826), (6725096, 6725157), (6725259, 6725775), (6726129, 6726201), (6726303, 6726372), (6726540, 6726598), (6726718, 6727862), (6726718, 6727193), (6727322, 6727862), (6727334, 6727862), (6728780, 6728877), (6729503, 6729569), (6729772, 6729826), (6729934, 6730046), (6730366, 6730422), (6730539, 6730598)] 2021-10-25 09:35:08.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6723902, 6724177, 'FBtr0079301_exon_1') contains intron (6724084, 6724177) 2021-10-25 09:35:08.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079301_exon_1'] 2021-10-25 09:35:08.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263040: ['FBtr0306929'] 2021-10-25 09:35:08.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263040 has a single transcript. 2021-10-25 09:35:08.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030306: ['FBtr0073506', 'FBtr0340293', 'FBtr0340294'] 2021-10-25 09:35:08.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263041: ['FBtr0306930'] 2021-10-25 09:35:08.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263041 has a single transcript. 2021-10-25 09:35:08.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263042: ['FBtr0306919', 'FBtr0344867'] 2021-10-25 09:35:08.537 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079300': ['FBtr0329943']} 2021-10-25 09:35:08.538 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329943']] 2021-10-25 09:35:08.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037614: ['FBtr0081905', 'FBtr0300543', 'FBtr0300544'] 2021-10-25 09:35:08.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033983: ['FBtr0087428', 'FBtr0303762', 'FBtr0303760', 'FBtr0303761'] 2021-10-25 09:35:08.583 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11485431, 11485560), (11486165, 11486235)] 2021-10-25 09:35:08.584 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11485560, 11486238, 'FBtr0340293_exon_2') contains intron (11486165, 11486235) 2021-10-25 09:35:08.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(621461, 621633), (621464, 621633)] 2021-10-25 09:35:08.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2151152, 2151271), (2151462, 2151522), (2151611, 2151676), (2151846, 2151916), (2152759, 2153113), (2155726, 2156388), (2155726, 2155787), (2157513, 2158292)] 2021-10-25 09:35:08.584 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11485560, 11486566, 'FBtr0340294_exon_2') contains intron (11486165, 11486235) 2021-10-25 09:35:08.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340293_exon_2', 'FBtr0340294_exon_2'] 2021-10-25 09:35:08.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8716568, 8716900), (8716568, 8716895), (8717341, 8717848), (8718371, 8719803)] 2021-10-25 09:35:08.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263046: ['FBtr0306944'] 2021-10-25 09:35:08.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263046 has a single transcript. 2021-10-25 09:35:08.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263047: ['FBtr0306948'] 2021-10-25 09:35:08.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263047 has a single transcript. 2021-10-25 09:35:08.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263048: ['FBtr0306945', 'FBtr0306946', 'FBtr0306947'] 2021-10-25 09:35:08.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14930627, 14930686), (14930791, 14931151), (14932340, 14932401), (14932488, 14932854), (14933003, 14934800), (14933118, 14933230), (14933325, 14934800)] 2021-10-25 09:35:08.659 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14932854, 14933304, 'FBtr0087428_exon_1') contains intron (14933118, 14933230) 2021-10-25 09:35:08.660 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14932854, 14933325, 'FBtr0303761_exon_2') contains intron (14933118, 14933230) 2021-10-25 09:35:08.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087428_exon_1', 'FBtr0303761_exon_2'] 2021-10-25 09:35:08.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046706: ['FBtr0113784'] 2021-10-25 09:35:08.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046706 has a single transcript. 2021-10-25 09:35:08.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046756: ['FBtr0091956'] 2021-10-25 09:35:08.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046756 has a single transcript. 2021-10-25 09:35:08.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030307: ['FBtr0073545'] 2021-10-25 09:35:08.684 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030307 has a single transcript. 2021-10-25 09:35:08.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046763: ['FBtr0084047'] 2021-10-25 09:35:08.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046763 has a single transcript. 2021-10-25 09:35:08.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046776: ['FBtr0303308'] 2021-10-25 09:35:08.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046776 has a single transcript. 2021-10-25 09:35:08.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004656: ['FBtr0071118', 'FBtr0071119', 'FBtr0071120', 'FBtr0071121', 'FBtr0071122', 'FBtr0301309', 'FBtr0333307', 'FBtr0333308', 'FBtr0333309'] 2021-10-25 09:35:08.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030309: ['FBtr0073543', 'FBtr0073544', 'FBtr0339693', 'FBtr0339694'] 2021-10-25 09:35:08.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046793: ['FBtr0073369'] 2021-10-25 09:35:08.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046793 has a single transcript. 2021-10-25 09:35:08.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046873: ['FBtr0081676'] 2021-10-25 09:35:08.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046873 has a single transcript. 2021-10-25 09:35:08.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046874: ['FBtr0091716', 'FBtr0091717', 'FBtr0332503', 'FBtr0332504', 'FBtr0433508'] 2021-10-25 09:35:08.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037615: ['FBtr0081907'] 2021-10-25 09:35:08.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22382268, 22382329), (22382504, 22382562), (22383142, 22383204), (22383358, 22383450), (22383358, 22383411), (22383504, 22383561), (22383504, 22383558)] 2021-10-25 09:35:08.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037615 has a single transcript. 2021-10-25 09:35:08.733 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.733 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037616: ['FBtr0081908', 'FBtr0081909', 'FBtr0081910', 'FBtr0300545'] 2021-10-25 09:35:08.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11555795, 11555925), (11556111, 11556183), (11556346, 11556409), (11556346, 11558532), (11556346, 11558487), (11556346, 11558538)] 2021-10-25 09:35:08.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.787 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033984: ['FBtr0087407', 'FBtr0303759'] 2021-10-25 09:35:08.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8721556, 8721622), (8721556, 8721625), (8721561, 8721622), (8721561, 8721625)] 2021-10-25 09:35:08.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14936018, 14936091), (14936298, 14936354), (14936490, 14936546), (14936836, 14937049), (14938843, 14938904)] 2021-10-25 09:35:08.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8774906, 8774970), (8775114, 8775182), (8775260, 8775317), (8777941, 8779250), (8777941, 8782285), (8782384, 8782441), (8784172, 8784439), (8784592, 8785729), (8786008, 8786521), (8786623, 8786697), (8786925, 8793103), (8786925, 8790508), (8790667, 8792441), (8793367, 8793977), (8793367, 8796704), (8794091, 8796704), (8796936, 8797323), (8798046, 8800874), (8798046, 8799461), (8798046, 8800693), (8800779, 8800874)] 2021-10-25 09:35:08.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263049: ['FBtr0306973'] 2021-10-25 09:35:08.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263049 has a single transcript. 2021-10-25 09:35:08.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263050: ['FBtr0306974', 'FBtr0346589'] 2021-10-25 09:35:08.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087008: ['FBtr0074762', 'FBtr0334278', 'FBtr0334279', 'FBtr0334280', 'FBtr0334281'] 2021-10-25 09:35:08.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8041044, 8041110), (8041279, 8041350), (8043733, 8043906), (8044030, 8044332), (8044391, 8050151), (8044415, 8050151), (8050283, 8050436), (8050556, 8051358), (8050556, 8051370), (8051529, 8051694), (8053279, 8054107), (8053279, 8054122), (8053294, 8054107), (8053294, 8054122), (8055893, 8055966), (8055918, 8055966), (8056137, 8059866), (8056137, 8056609), (8056137, 8056316), (8056137, 8058338), (8060158, 8061263), (8060158, 8061375), (8060158, 8060902), (8060158, 8060876)] 2021-10-25 09:35:08.887 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033985: ['FBtr0087408'] 2021-10-25 09:35:08.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033985 has a single transcript. 2021-10-25 09:35:08.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21166948, 21167002)] 2021-10-25 09:35:08.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033987: ['FBtr0087409', 'FBtr0087411', 'FBtr0339987', 'FBtr0345946', 'FBtr0345947'] 2021-10-25 09:35:08.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030310: ['FBtr0073509', 'FBtr0340296'] 2021-10-25 09:35:08.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11562280, 11562338), (11562457, 11562518)] 2021-10-25 09:35:08.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:08.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:08.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263051: ['FBtr0306975', 'FBtr0306976', 'FBtr0346588'] 2021-10-25 09:35:08.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037617: ['FBtr0081911', 'FBtr0346112', 'FBtr0337073'] 2021-10-25 09:35:08.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19628763, 19628902), (19629091, 19629149), (19629360, 19629515), (19629813, 19629873), (19630149, 19630236), (19630686, 19630744), (19630900, 19630965), (19631066, 19632636), (19632905, 19632969), (19632923, 19632969), (19634071, 19634133), (19634086, 19634133), (19636439, 19637617), (19636469, 19637372), (19636469, 19637617), (19636469, 19638189), (19636469, 19636851), (19637813, 19638189)] 2021-10-25 09:35:08.998 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19637617, 19638369, 'FBtr0074762_exon_1') contains intron (19637813, 19638189) 2021-10-25 09:35:08.999 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19637372, 19638369, 'FBtr0334279_exon_1') contains intron (19637813, 19638189) 2021-10-25 09:35:08.999 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19636851, 19638369, 'FBtr0334280_exon_1') contains intron (19637813, 19638189) 2021-10-25 09:35:09.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074762_exon_1', 'FBtr0334279_exon_1', 'FBtr0334280_exon_1'] 2021-10-25 09:35:09.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14963925, 14971729), (14965999, 14971729), (14972756, 14977239), (14976179, 14977239), (14977473, 14978229), (14977473, 14977686), (14977923, 14978229), (14978706, 14978836)] 2021-10-25 09:35:09.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030311: ['FBtr0073510', 'FBtr0433504'] 2021-10-25 09:35:09.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046875: ['FBtr0078617'] 2021-10-25 09:35:09.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046875 has a single transcript. 2021-10-25 09:35:09.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21166948, 21167002)] 2021-10-25 09:35:09.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.038 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8723361, 8723432), (8723950, 8724133), (8724382, 8724450)] 2021-10-25 09:35:09.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046876: ['FBtr0078618'] 2021-10-25 09:35:09.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046876 has a single transcript. 2021-10-25 09:35:09.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046878: ['FBtr0078584'] 2021-10-25 09:35:09.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046878 has a single transcript. 2021-10-25 09:35:09.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046879: ['FBtr0086479', 'FBtr0307891'] 2021-10-25 09:35:09.064 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11570776, 11570866), (11571108, 11571168), (11571504, 11571692)] 2021-10-25 09:35:09.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19700811, 19700969), (19700811, 19700999)] 2021-10-25 09:35:09.098 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.098 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030313: ['FBtr0073511', 'FBtr0332616'] 2021-10-25 09:35:09.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263072: ['FBtr0307021', 'FBtr0307022', 'FBtr0332390'] 2021-10-25 09:35:09.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037618: ['FBtr0081912'] 2021-10-25 09:35:09.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037618 has a single transcript. 2021-10-25 09:35:09.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046880: ['FBtr0086480'] 2021-10-25 09:35:09.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046880 has a single transcript. 2021-10-25 09:35:09.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046885: ['FBtr0085188'] 2021-10-25 09:35:09.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046885 has a single transcript. 2021-10-25 09:35:09.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037619: ['FBtr0301194'] 2021-10-25 09:35:09.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037619 has a single transcript. 2021-10-25 09:35:09.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11573062, 11573116)] 2021-10-25 09:35:09.165 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11572706, 11573640, 'FBtr0073511_exon_1') contains intron (11573062, 11573116) 2021-10-25 09:35:09.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073511_exon_1'] 2021-10-25 09:35:09.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046886: ['FBtr0085187'] 2021-10-25 09:35:09.168 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046886 has a single transcript. 2021-10-25 09:35:09.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037620: ['FBtr0081948'] 2021-10-25 09:35:09.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037620 has a single transcript. 2021-10-25 09:35:09.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046887: ['FBtr0085186'] 2021-10-25 09:35:09.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046887 has a single transcript. 2021-10-25 09:35:09.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037621: ['FBtr0081947'] 2021-10-25 09:35:09.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037621 has a single transcript. 2021-10-25 09:35:09.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046888: ['FBtr0080965'] 2021-10-25 09:35:09.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046888 has a single transcript. 2021-10-25 09:35:09.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0046999: ['FBtr0087044'] 2021-10-25 09:35:09.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0046999 has a single transcript. 2021-10-25 09:35:09.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037622: ['FBtr0081914'] 2021-10-25 09:35:09.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037622 has a single transcript. 2021-10-25 09:35:09.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087011: ['FBtr0114111', 'FBtr0114112', 'FBtr0302581', 'FBtr0302582'] 2021-10-25 09:35:09.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047000: ['FBtr0347286'] 2021-10-25 09:35:09.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047000 has a single transcript. 2021-10-25 09:35:09.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10605226, 10605324), (10606154, 10606453), (10608306, 10608402), (10608566, 10608637), (10608785, 10610326), (10608839, 10610326), (10610683, 10610820), (10612436, 10616871), (10618609, 10618732), (10618986, 10619965), (10618996, 10619965)] 2021-10-25 09:35:09.206 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10606453, 10608566, 'FBtr0307021_exon_7') contains intron (10608306, 10608402) 2021-10-25 09:35:09.206 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10606453, 10608566, 'FBtr0307022_exon_7') contains intron (10608306, 10608402) 2021-10-25 09:35:09.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307021_exon_7', 'FBtr0307022_exon_7'] 2021-10-25 09:35:09.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033988: ['FBtr0301507'] 2021-10-25 09:35:09.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033988 has a single transcript. 2021-10-25 09:35:09.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047038: ['FBtr0076276'] 2021-10-25 09:35:09.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047038 has a single transcript. 2021-10-25 09:35:09.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037623: ['FBtr0081944', 'FBtr0081945', 'FBtr0081946'] 2021-10-25 09:35:09.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033989: ['FBtr0087424'] 2021-10-25 09:35:09.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033989 has a single transcript. 2021-10-25 09:35:09.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047092: ['FBtr0071016'] 2021-10-25 09:35:09.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047092 has a single transcript. 2021-10-25 09:35:09.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033990: ['FBtr0087421', 'FBtr0332259'] 2021-10-25 09:35:09.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030314: ['FBtr0073512'] 2021-10-25 09:35:09.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030314 has a single transcript. 2021-10-25 09:35:09.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047095: ['FBtr0347285'] 2021-10-25 09:35:09.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047095 has a single transcript. 2021-10-25 09:35:09.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030316: ['FBtr0073513', 'FBtr0300872'] 2021-10-25 09:35:09.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047114: ['FBtr0084492'] 2021-10-25 09:35:09.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047114 has a single transcript. 2021-10-25 09:35:09.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047135: ['FBtr0073106', 'FBtr0073107'] 2021-10-25 09:35:09.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004657: ['FBtr0071105', 'FBtr0340135', 'FBtr0340136', 'FBtr0340137'] 2021-10-25 09:35:09.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14992901, 14992954), (14993428, 14993511)] 2021-10-25 09:35:09.273 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14992522, 14993428, 'FBtr0087421_exon_2') contains intron (14992901, 14992954) 2021-10-25 09:35:09.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087421_exon_2'] 2021-10-25 09:35:09.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8738708, 8738777), (8739091, 8747525), (8739091, 8747343), (8739091, 8745478)] 2021-10-25 09:35:09.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11577078, 11577144), (11577818, 11577876), (11578074, 11578132)] 2021-10-25 09:35:09.287 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11577144, 11578074, 'FBtr0300872_exon_2') contains intron (11577818, 11577876) 2021-10-25 09:35:09.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300872_exon_2'] 2021-10-25 09:35:09.287 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3198431, 3198751), (3198866, 3198992)] 2021-10-25 09:35:09.294 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3198751, 3199047, 'FBtr0073106_exon_1') contains intron (3198866, 3198992) 2021-10-25 09:35:09.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073106_exon_1'] 2021-10-25 09:35:09.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1649245, 1726643), (1650149, 1726643), (1727618, 1727671), (1727978, 1761923), (1727978, 1731184), (1762055, 1762107), (1762059, 1762159), (1762295, 1772027), (1772214, 1778586)] 2021-10-25 09:35:09.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263076: ['FBtr0340221', 'FBtr0392907', 'FBtr0392908', 'FBtr0306906', 'FBtr0306905'] 2021-10-25 09:35:09.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033993: ['FBtr0087418'] 2021-10-25 09:35:09.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033993 has a single transcript. 2021-10-25 09:35:09.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033994: ['FBtr0087417', 'FBtr0300324'] 2021-10-25 09:35:09.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030317: ['FBtr0073539'] 2021-10-25 09:35:09.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030317 has a single transcript. 2021-10-25 09:35:09.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047178: ['FBtr0075647'] 2021-10-25 09:35:09.348 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047178 has a single transcript. 2021-10-25 09:35:09.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030318: ['FBtr0073519', 'FBtr0073518'] 2021-10-25 09:35:09.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047199: ['FBtr0082864', 'FBtr0344411'] 2021-10-25 09:35:09.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8061725, 8063839), (8061870, 8063839), (8062080, 8063839), (8064459, 8064532), (8064761, 8065447), (8064761, 8066097), (8065532, 8067061), (8066182, 8067061), (8067496, 8067559), (8068783, 8068869)] 2021-10-25 09:35:09.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11600326, 11604311), (11604673, 11604735), (11605078, 11605137)] 2021-10-25 09:35:09.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13948998, 13949082), (13949300, 13949354)] 2021-10-25 09:35:09.402 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15148088, 15148149), (15148360, 15148411), (15148823, 15148883), (15149077, 15149170), (15149077, 15149163)] 2021-10-25 09:35:09.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037624: ['FBtr0081915', 'FBtr0308889'] 2021-10-25 09:35:09.433 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17557534, 17560496), (17560671, 17560726), (17560954, 17561018), (17561159, 17561477), (17561619, 17561697), (17562538, 17562659), (17562538, 17562957), (17562538, 17562619), (17563281, 17563340)] 2021-10-25 09:35:09.435 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.435 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.452 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0392907': ['FBtr0392908']} 2021-10-25 09:35:09.452 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0392908']] 2021-10-25 09:35:09.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030319: ['FBtr0073537'] 2021-10-25 09:35:09.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030319 has a single transcript. 2021-10-25 09:35:09.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047205: ['FBtr0076899'] 2021-10-25 09:35:09.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047205 has a single transcript. 2021-10-25 09:35:09.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8747991, 8752060), (8748245, 8752060), (8752398, 8752513), (8753118, 8753180), (8753458, 8753520)] 2021-10-25 09:35:09.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033995: ['FBtr0087404'] 2021-10-25 09:35:09.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033995 has a single transcript. 2021-10-25 09:35:09.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047330: ['FBtr0073355'] 2021-10-25 09:35:09.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047330 has a single transcript. 2021-10-25 09:35:09.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030320: ['FBtr0073536', 'FBtr0306133', 'FBtr0306134', 'FBtr0306135'] 2021-10-25 09:35:09.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033996: ['FBtr0087363', 'FBtr0310139', 'FBtr0310140'] 2021-10-25 09:35:09.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047334: ['FBtr0091954', 'FBtr0302931'] 2021-10-25 09:35:09.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087012: ['FBtr0078854', 'FBtr0078855', 'FBtr0300474', 'FBtr0339395', 'FBtr0339397'] 2021-10-25 09:35:09.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6232772, 6232836), (6232990, 6233299), (6232990, 6233336)] 2021-10-25 09:35:09.512 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.513 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037625: ['FBtr0081943', 'FBtr0302489', 'FBtr0308890'] 2021-10-25 09:35:09.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004666: ['FBtr0082710', 'FBtr0082711', 'FBtr0334613', 'FBtr0334614'] 2021-10-25 09:35:09.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15201319, 15201466), (15201373, 15201466), (15201831, 15201893), (15202127, 15203021), (15203901, 15203960), (15204175, 15204234)] 2021-10-25 09:35:09.536 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15203960, 15204466, 'FBtr0087363_exon_4') contains intron (15204175, 15204234) 2021-10-25 09:35:09.537 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15203960, 15204466, 'FBtr0310139_exon_5') contains intron (15204175, 15204234) 2021-10-25 09:35:09.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087363_exon_4', 'FBtr0310139_exon_5'] 2021-10-25 09:35:09.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11607955, 11608013), (11608152, 11608233), (11608496, 11608552), (11608499, 11608552), (11608640, 11608702), (11609307, 11610201), (11609307, 11609401), (11609713, 11610201), (11610413, 11610476), (11610834, 11611531)] 2021-10-25 09:35:09.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047338: ['FBtr0075630'] 2021-10-25 09:35:09.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0047338 has a single transcript. 2021-10-25 09:35:09.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0047351: ['FBtr0084473', 'FBtr0334769'] 2021-10-25 09:35:09.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8750713, 8750779), (8754410, 8754486), (8756212, 8767333), (8767794, 8768119), (8767794, 8768074)] 2021-10-25 09:35:09.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.604 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4613350, 4622508), (4619594, 4622508), (4623624, 4626972), (4627197, 4627258), (4627457, 4627905), (4628349, 4630170), (4628349, 4630167), (4628349, 4630128), (4630521, 4631807), (4632104, 4632737)] 2021-10-25 09:35:09.604 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4631807, 4633304, 'FBtr0078854_exon_7') contains intron (4632104, 4632737) 2021-10-25 09:35:09.605 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078854_exon_7'] 2021-10-25 09:35:09.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23700119, 23700179)] 2021-10-25 09:35:09.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.614 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13058243, 13072661), (13062730, 13072661), (13072550, 13072661), (13072856, 13074079), (13074249, 13074570), (13074672, 13074836), (13074672, 13074812), (13075004, 13075076), (13075276, 13076198), (13076305, 13076393)] 2021-10-25 09:35:09.616 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.616 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263077: ['FBtr0306941', 'FBtr0306943', 'FBtr0306934', 'FBtr0306936', 'FBtr0306938', 'FBtr0306931', 'FBtr0306942', 'FBtr0306935', 'FBtr0306939', 'FBtr0306933', 'FBtr0306940', 'FBtr0306937', 'FBtr0306932', 'FBtr0331951', 'FBtr0331952'] 2021-10-25 09:35:09.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033997: ['FBtr0087364'] 2021-10-25 09:35:09.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0033997 has a single transcript. 2021-10-25 09:35:09.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033998: ['FBtr0087402', 'FBtr0087403', 'FBtr0329939'] 2021-10-25 09:35:09.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050000: ['FBtr0088463'] 2021-10-25 09:35:09.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050000 has a single transcript. 2021-10-25 09:35:09.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050001: ['FBtr0088492'] 2021-10-25 09:35:09.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050001 has a single transcript. 2021-10-25 09:35:09.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050005: ['FBtr0088464'] 2021-10-25 09:35:09.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050005 has a single transcript. 2021-10-25 09:35:09.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037626: ['FBtr0081916'] 2021-10-25 09:35:09.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037626 has a single transcript. 2021-10-25 09:35:09.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030321: ['FBtr0073520', 'FBtr0343647'] 2021-10-25 09:35:09.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050008: ['FBtr0088380'] 2021-10-25 09:35:09.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050008 has a single transcript. 2021-10-25 09:35:09.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037627: ['FBtr0081942'] 2021-10-25 09:35:09.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037627 has a single transcript. 2021-10-25 09:35:09.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037630: ['FBtr0081917'] 2021-10-25 09:35:09.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037630 has a single transcript. 2021-10-25 09:35:09.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050009: ['FBtr0088361', 'FBtr0303450'] 2021-10-25 09:35:09.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037632: ['FBtr0081918'] 2021-10-25 09:35:09.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037632 has a single transcript. 2021-10-25 09:35:09.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15207799, 15209811), (15210179, 15210244), (15211068, 15211576), (15211667, 15211725), (15212555, 15212606)] 2021-10-25 09:35:09.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037633: ['FBtr0081934', 'FBtr0334332'] 2021-10-25 09:35:09.734 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087402': ['FBtr0329939']} 2021-10-25 09:35:09.735 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329939']] 2021-10-25 09:35:09.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11612104, 11612175), (11613264, 11613336)] 2021-10-25 09:35:09.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.740 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10263617, 10263680)] 2021-10-25 09:35:09.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8805126, 8805191), (8805701, 8805782)] 2021-10-25 09:35:09.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004687: ['FBtr0070783', 'FBtr0308579'] 2021-10-25 09:35:09.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0033999: ['FBtr0087401', 'FBtr0339997'] 2021-10-25 09:35:09.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030323: ['FBtr0073532', 'FBtr0073533', 'FBtr0073534'] 2021-10-25 09:35:09.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050010: ['FBtr0088374', 'FBtr0332914'] 2021-10-25 09:35:09.814 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5620286, 5620478), (5620286, 5622251), (5622279, 5622416)] 2021-10-25 09:35:09.814 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087013: ['FBtr0078860', 'FBtr0336462'] 2021-10-25 09:35:09.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037634: ['FBtr0081919'] 2021-10-25 09:35:09.827 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037634 has a single transcript. 2021-10-25 09:35:09.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15215435, 15215507)] 2021-10-25 09:35:09.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037635: ['FBtr0309098', 'FBtr0309099', 'FBtr0334331'] 2021-10-25 09:35:09.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9863963, 9864016)] 2021-10-25 09:35:09.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11678270, 11678402), (11678349, 11678402)] 2021-10-25 09:35:09.870 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11677343, 11678589, 'FBtr0073534_exon_1') contains intron (11678270, 11678402) 2021-10-25 09:35:09.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073534_exon_1'] 2021-10-25 09:35:09.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4649767, 4650584), (4650734, 4650798), (4651893, 4651982), (4653336, 4653451)] 2021-10-25 09:35:09.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004698: ['FBtr0087373', 'FBtr0087374', 'FBtr0308700'] 2021-10-25 09:35:09.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034000: ['FBtr0087366'] 2021-10-25 09:35:09.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034000 has a single transcript. 2021-10-25 09:35:09.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8809667, 8813009), (8809667, 8809728)] 2021-10-25 09:35:09.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034001: ['FBtr0087400'] 2021-10-25 09:35:09.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034001 has a single transcript. 2021-10-25 09:35:09.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034002: ['FBtr0087367', 'FBtr0087368', 'FBtr0339993', 'FBtr0339994', 'FBtr0339995'] 2021-10-25 09:35:09.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050011: ['FBtr0089759', 'FBtr0089758', 'FBtr0339428', 'FBtr0346634'] 2021-10-25 09:35:09.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087021: ['FBtr0082690'] 2021-10-25 09:35:09.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0087021 has a single transcript. 2021-10-25 09:35:09.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087035: ['FBtr0075559', 'FBtr0075560', 'FBtr0331933'] 2021-10-25 09:35:09.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15311967, 15312032), (15311967, 15312035), (15312817, 15314617), (15316614, 15316679), (15317147, 15317208), (15317377, 15317433)] 2021-10-25 09:35:09.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:09.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030326: ['FBtr0073531', 'FBtr0346275'] 2021-10-25 09:35:09.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7623293, 7626490), (7623322, 7626490), (7627172, 7634215), (7628975, 7630176), (7629112, 7630176), (7630328, 7634215), (7634314, 7634758), (7635000, 7635053), (7635200, 7638597), (7635200, 7635515), (7635605, 7638597), (7637193, 7638052), (7637193, 7638119), (7637533, 7638052), (7638372, 7638597), (7638905, 7639703), (7639268, 7639703), (7639871, 7639930), (7640051, 7640116), (7640617, 7647305), (7640617, 7640831), (7640617, 7648296), (7646426, 7648296), (7647677, 7648296), (7648510, 7648582), (7648697, 7650310), (7650808, 7650861), (7651002, 7651068), (7651208, 7651268)] 2021-10-25 09:35:09.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:09.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037636: ['FBtr0081931', 'FBtr0081932', 'FBtr0334659', 'FBtr0334660'] 2021-10-25 09:35:10.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11704741, 11704819)] 2021-10-25 09:35:10.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10127577, 10128580), (10128692, 10128822), (10128692, 10128783), (10129029, 10131621), (10131694, 10131773), (10132160, 10132304), (10132449, 10132749), (10133223, 10133841), (10134017, 10135467), (10135399, 10135467), (10135672, 10135741), (10135857, 10136460), (10136535, 10136594)] 2021-10-25 09:35:10.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15554222, 15554289), (15554472, 15556849), (15558117, 15558249), (15558338, 15558393), (15559003, 15559099), (15560116, 15560207), (15560578, 15560640)] 2021-10-25 09:35:10.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15554112, 15554472, 'FBtr0075560_exon_1') contains intron (15554222, 15554289) 2021-10-25 09:35:10.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075560_exon_1'] 2021-10-25 09:35:10.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15218655, 15218712), (15218836, 15221428), (15221565, 15221727), (15221817, 15222043), (15221823, 15222043), (15221823, 15221898), (15221980, 15222043), (15221980, 15222496), (15222425, 15222496), (15222982, 15223041), (15223159, 15223220), (15223326, 15223383)] 2021-10-25 09:35:10.045 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15221898, 15222425, 'FBtr0339994_exon_5') contains intron (15221980, 15222043) 2021-10-25 09:35:10.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339994_exon_5'] 2021-10-25 09:35:10.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004777: ['FBtr0081689'] 2021-10-25 09:35:10.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004777 has a single transcript. 2021-10-25 09:35:10.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004778: ['FBtr0081695'] 2021-10-25 09:35:10.063 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004778 has a single transcript. 2021-10-25 09:35:10.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030327: ['FBtr0073620'] 2021-10-25 09:35:10.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030327 has a single transcript. 2021-10-25 09:35:10.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004779: ['FBtr0081694'] 2021-10-25 09:35:10.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004779 has a single transcript. 2021-10-25 09:35:10.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004780: ['FBtr0081690'] 2021-10-25 09:35:10.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004780 has a single transcript. 2021-10-25 09:35:10.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030328: ['FBtr0073615', 'FBtr0073616', 'FBtr0073617', 'FBtr0073618', 'FBtr0073619', 'FBtr0303336', 'FBtr0303337', 'FBtr0303338', 'FBtr0303339', 'FBtr0345164', 'FBtr0333796', 'FBtr0333797'] 2021-10-25 09:35:10.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004781: ['FBtr0081693'] 2021-10-25 09:35:10.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004781 has a single transcript. 2021-10-25 09:35:10.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8819263, 8819927), (8819263, 8820542), (8819263, 8820311)] 2021-10-25 09:35:10.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.102 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004782: ['FBtr0081692'] 2021-10-25 09:35:10.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004782 has a single transcript. 2021-10-25 09:35:10.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004783: ['FBtr0081691'] 2021-10-25 09:35:10.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004783 has a single transcript. 2021-10-25 09:35:10.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004784: ['FBtr0087047'] 2021-10-25 09:35:10.129 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004784 has a single transcript. 2021-10-25 09:35:10.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087039: ['FBtr0076707'] 2021-10-25 09:35:10.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0087039 has a single transcript. 2021-10-25 09:35:10.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087040: ['FBtr0076393'] 2021-10-25 09:35:10.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0087040 has a single transcript. 2021-10-25 09:35:10.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004795: ['FBtr0072072', 'FBtr0072073', 'FBtr0340029', 'FBtr0340030', 'FBtr0340031'] 2021-10-25 09:35:10.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0087041: ['FBtr0273183'] 2021-10-25 09:35:10.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0087041 has a single transcript. 2021-10-25 09:35:10.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243486: ['FBtr0081029', 'FBtr0340228'] 2021-10-25 09:35:10.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050015: ['FBtr0088242', 'FBtr0088243', 'FBtr0113356', 'FBtr0113357', 'FBtr0331938', 'FBtr0331939', 'FBtr0306393'] 2021-10-25 09:35:10.221 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18013032, 18026954), (18027001, 18033763), (18033784, 18051460), (18051593, 18062361), (18062562, 18063804), (18063932, 18064633), (18064777, 18064851), (18064956, 18065027), (18065154, 18065259), (18065456, 18065526), (18065456, 18065574), (18065730, 18066775), (18066922, 18067066), (18067229, 18067640), (18067772, 18068800)] 2021-10-25 09:35:10.222 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.222 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037637: ['FBtr0081930'] 2021-10-25 09:35:10.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037637 has a single transcript. 2021-10-25 09:35:10.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034005: ['FBtr0087371'] 2021-10-25 09:35:10.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034005 has a single transcript. 2021-10-25 09:35:10.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037638: ['FBtr0081921', 'FBtr0081922'] 2021-10-25 09:35:10.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034007: ['FBtr0087393', 'FBtr0087394'] 2021-10-25 09:35:10.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23633264, 23647688), (23633264, 23642238), (23642405, 23642483), (23642634, 23642758), (23642634, 23642764), (23643095, 23643156), (23643095, 23643171), (23643272, 23647688), (23646363, 23647688), (23647761, 23650900), (23651084, 23651434), (23651582, 23651659), (23652153, 23652502), (23652601, 23652756), (23653280, 23653462)] 2021-10-25 09:35:10.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243511: ['FBtr0083829'] 2021-10-25 09:35:10.288 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0243511 has a single transcript. 2021-10-25 09:35:10.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243512: ['FBtr0081792', 'FBtr0339722'] 2021-10-25 09:35:10.297 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15297919, 15297976)] 2021-10-25 09:35:10.298 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15296763, 15298329, 'FBtr0087394_exon_1') contains intron (15297919, 15297976) 2021-10-25 09:35:10.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087394_exon_1'] 2021-10-25 09:35:10.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8824608, 8824687), (8824889, 8824954), (8824889, 8824951), (8825408, 8825632), (8826588, 8826642)] 2021-10-25 09:35:10.303 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10842850, 10842917), (10842981, 10843073), (10843511, 10848452), (10843511, 10843846), (10843511, 10843594), (10843738, 10848452), (10848540, 10848593), (10849260, 10856123), (10849260, 10853398), (10856308, 10861209), (10856308, 10862822), (10862955, 10874570), (10862955, 10873853), (10874149, 10874570)] 2021-10-25 09:35:10.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10873853, 10874771, 'FBtr0088243_exon_1') contains intron (10874149, 10874570) 2021-10-25 09:35:10.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11712366, 11712768), (11713684, 11713754), (11713688, 11713754), (11713805, 11714021), (11713805, 11714474), (11713805, 11714239), (11713805, 11714557), (11713808, 11714557), (11713808, 11714021), (11713808, 11714474), (11714777, 11714980), (11714777, 11715271)] 2021-10-25 09:35:10.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10873853, 10874771, 'FBtr0113356_exon_1') contains intron (10874149, 10874570) 2021-10-25 09:35:10.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11714557, 11715030, 'FBtr0073615_exon_1') contains intron (11714777, 11714980) 2021-10-25 09:35:10.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11712768, 11713805, 'FBtr0073616_exon_2') contains intron (11713684, 11713754) 2021-10-25 09:35:10.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11714557, 11715030, 'FBtr0073616_exon_1') contains intron (11714777, 11714980) 2021-10-25 09:35:10.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11712768, 11713808, 'FBtr0073617_exon_2') contains intron (11713684, 11713754) 2021-10-25 09:35:10.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088243_exon_1', 'FBtr0113356_exon_1'] 2021-10-25 09:35:10.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.342 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11714557, 11715030, 'FBtr0303339_exon_1') contains intron (11714777, 11714980) 2021-10-25 09:35:10.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11712768, 11713847, 'FBtr0345164_exon_1') contains intron (11713684, 11713754) 2021-10-25 09:35:10.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11712768, 11713805, 'FBtr0333796_exon_2') contains intron (11713684, 11713754) 2021-10-25 09:35:10.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073615_exon_1', 'FBtr0073616_exon_2', 'FBtr0073616_exon_1', 'FBtr0073617_exon_2', 'FBtr0303339_exon_1', 'FBtr0345164_exon_1', 'FBtr0333796_exon_2'] 2021-10-25 09:35:10.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8106095, 8108231), (8106739, 8108231), (8108378, 8111076), (8111301, 8120511)] 2021-10-25 09:35:10.350 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034008: ['FBtr0087392'] 2021-10-25 09:35:10.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034008 has a single transcript. 2021-10-25 09:35:10.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037643: ['FBtr0081957', 'FBtr0113206', 'FBtr0301786', 'FBtr0301787', 'FBtr0347567', 'FBtr0347568', 'FBtr0334327', 'FBtr0334328'] 2021-10-25 09:35:10.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034009: ['FBtr0087391'] 2021-10-25 09:35:10.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034009 has a single transcript. 2021-10-25 09:35:10.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034010: ['FBtr0087390', 'FBtr0340000'] 2021-10-25 09:35:10.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243513: ['FBtr0077666'] 2021-10-25 09:35:10.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0243513 has a single transcript. 2021-10-25 09:35:10.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243514: ['FBtr0310079'] 2021-10-25 09:35:10.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0243514 has a single transcript. 2021-10-25 09:35:10.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15326290, 15326350)] 2021-10-25 09:35:10.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243516: ['FBtr0071791', 'FBtr0071792', 'FBtr0071793', 'FBtr0071794', 'FBtr0071795', 'FBtr0071796', 'FBtr0113104', 'FBtr0342980', 'FBtr0302295', 'FBtr0302296', 'FBtr0302297', 'FBtr0302298'] 2021-10-25 09:35:10.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004797: ['FBtr0080915', 'FBtr0080916', 'FBtr0080917', 'FBtr0347182'] 2021-10-25 09:35:10.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034011: ['FBtr0087389'] 2021-10-25 09:35:10.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034011 has a single transcript. 2021-10-25 09:35:10.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034012: ['FBtr0114456'] 2021-10-25 09:35:10.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034012 has a single transcript. 2021-10-25 09:35:10.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034013: ['FBtr0087382', 'FBtr0339998'] 2021-10-25 09:35:10.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8938751, 8938813), (8938888, 8939668), (8939772, 8940481), (8940634, 8940698), (8940861, 8940921), (8941189, 8941313), (8941189, 8941407), (8941316, 8941407), (8941832, 8941900), (8942070, 8942677)] 2021-10-25 09:35:10.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.551 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16816719, 16820111), (16816792, 16820111), (16817039, 16820111), (16817459, 16820111), (16820475, 16820530), (16820659, 16820717), (16820809, 16820877), (16820930, 16825409), (16825518, 16825578), (16825722, 16825778), (16826089, 16826149), (16826422, 16826482)] 2021-10-25 09:35:10.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15340603, 15350062), (15350594, 15356820), (15357712, 15358008), (15358290, 15358578), (15358749, 15360414), (15360468, 15361982), (15362300, 15364512), (15364641, 15364745), (15364938, 15365710), (15365784, 15365842)] 2021-10-25 09:35:10.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050016: ['FBtr0088241'] 2021-10-25 09:35:10.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050016 has a single transcript. 2021-10-25 09:35:10.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050018: ['FBtr0304706'] 2021-10-25 09:35:10.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050018 has a single transcript. 2021-10-25 09:35:10.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034021: ['FBtr0087359', 'FBtr0340003', 'FBtr0345392'] 2021-10-25 09:35:10.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050020: ['FBtr0088235', 'FBtr0339521'] 2021-10-25 09:35:10.683 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263078: ['FBtr0306920', 'FBtr0343810'] 2021-10-25 09:35:10.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10887366, 10887435), (10887535, 10887597), (10888014, 10888075), (10888225, 10888470), (10888225, 10888282), (10888396, 10888470), (10888821, 10889610), (10890342, 10890412), (10890592, 10890652), (10890748, 10890862), (10890898, 10890986), (10891259, 10891407), (10891259, 10891410), (10892317, 10892377)] 2021-10-25 09:35:10.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004811: ['FBtr0081316', 'FBtr0081317', 'FBtr0332246'] 2021-10-25 09:35:10.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15472933, 15473176), (15472984, 15473176), (15473745, 15473884), (15474105, 15475940), (15476353, 15482233)] 2021-10-25 09:35:10.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18671790, 18671891), (18672286, 18672339), (18672500, 18672559)] 2021-10-25 09:35:10.727 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22107205, 22108485), (22108780, 22108850), (22108780, 22109586), (22108979, 22109586), (22110023, 22110187), (22110023, 22110205), (22110360, 22110545), (22110938, 22111327), (22111509, 22111861), (22112139, 22112209), (22112588, 22116164), (22112588, 22121892), (22112588, 22116150), (22112588, 22112681), (22122194, 22122331)] 2021-10-25 09:35:10.752 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22121892, 22122562, 'FBtr0071793_exon_1') contains intron (22122194, 22122331) 2021-10-25 09:35:10.753 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22121892, 22122562, 'FBtr0113104_exon_1') contains intron (22122194, 22122331) 2021-10-25 09:35:10.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22121892, 22122562, 'FBtr0302297_exon_1') contains intron (22122194, 22122331) 2021-10-25 09:35:10.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071793_exon_1', 'FBtr0113104_exon_1', 'FBtr0302297_exon_1'] 2021-10-25 09:35:10.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050021: ['FBtr0088196', 'FBtr0114569', 'FBtr0114570', 'FBtr0339484'] 2021-10-25 09:35:10.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263079: ['FBtr0306921', 'FBtr0306922'] 2021-10-25 09:35:10.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19793158, 19793223), (19793402, 19794582), (19794308, 19794582), (19795043, 19795539)] 2021-10-25 09:35:10.788 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19793485, 19795043, 'FBtr0081317_exon_2') contains intron (19794308, 19794582) 2021-10-25 09:35:10.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081317_exon_2'] 2021-10-25 09:35:10.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034022: ['FBtr0340002', 'FBtr0273307'] 2021-10-25 09:35:10.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030329: ['FBtr0073551', 'FBtr0332954', 'FBtr0303334', 'FBtr0303335'] 2021-10-25 09:35:10.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18667546, 18667606), (18668479, 18668540), (18669365, 18669437), (18669563, 18669891), (18669563, 18671031)] 2021-10-25 09:35:10.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11227543, 11227662), (11227839, 11228115), (11227956, 11228115), (11228437, 11228508), (11228676, 11229003), (11228676, 11229410), (11229033, 11229410), (11229542, 11229598), (11229876, 11229939), (11230048, 11232153)] 2021-10-25 09:35:10.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15486456, 15486528), (15489349, 15489546), (15489898, 15496966), (15497033, 15497118)] 2021-10-25 09:35:10.871 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15496966, 15497231, 'FBtr0340002_exon_1') contains intron (15497033, 15497118) 2021-10-25 09:35:10.872 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340002_exon_1'] 2021-10-25 09:35:10.872 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263080: ['FBtr0307096', 'FBtr0335380'] 2021-10-25 09:35:10.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004828: ['FBtr0071345', 'FBtr0071347', 'FBtr0071346', 'FBtr0340343'] 2021-10-25 09:35:10.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037644: ['FBtr0082015'] 2021-10-25 09:35:10.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037644 has a single transcript. 2021-10-25 09:35:10.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037645: ['FBtr0082014', 'FBtr0334329'] 2021-10-25 09:35:10.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11716814, 11717049), (11716820, 11717049), (11717264, 11718367), (11717264, 11717989), (11718234, 11718367), (11718770, 11718831)] 2021-10-25 09:35:10.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:10.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.928 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034023: ['FBtr0273302'] 2021-10-25 09:35:10.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034023 has a single transcript. 2021-10-25 09:35:10.940 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8953935, 8961948), (8953935, 8962298), (8962088, 8962298)] 2021-10-25 09:35:10.941 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034025: ['FBtr0087331', 'FBtr0087332', 'FBtr0340001'] 2021-10-25 09:35:10.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9154240, 9154379), (9154685, 9155403), (9154685, 9156579), (9154685, 9154784)] 2021-10-25 09:35:10.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:10.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:10.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263081: ['FBtr0307097', 'FBtr0335381'] 2021-10-25 09:35:10.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037646: ['FBtr0081958', 'FBtr0340014'] 2021-10-25 09:35:10.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050022: ['FBtr0289990'] 2021-10-25 09:35:10.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050022 has a single transcript. 2021-10-25 09:35:11.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050025: ['FBtr0088158'] 2021-10-25 09:35:11.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050025 has a single transcript. 2021-10-25 09:35:11.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15511731, 15511813), (15512765, 15513745), (15513632, 15513745), (15514267, 15514396)] 2021-10-25 09:35:11.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050026: ['FBtr0300922'] 2021-10-25 09:35:11.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050026 has a single transcript. 2021-10-25 09:35:11.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050029: ['FBtr0339480', 'FBtr0088109'] 2021-10-25 09:35:11.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:11.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8981109, 8981830), (8981915, 8981979), (8982167, 8982238)] 2021-10-25 09:35:11.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8981830, 8982167, 'FBtr0340014_exon_2') contains intron (8981915, 8981979) 2021-10-25 09:35:11.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340014_exon_2'] 2021-10-25 09:35:11.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030330: ['FBtr0073552', 'FBtr0073553', 'FBtr0332955'] 2021-10-25 09:35:11.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:11.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263082: ['FBtr0307098', 'FBtr0336626'] 2021-10-25 09:35:11.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037647: ['FBtr0082013'] 2021-10-25 09:35:11.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037647 has a single transcript. 2021-10-25 09:35:11.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037648: ['FBtr0081960', 'FBtr0336753'] 2021-10-25 09:35:11.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034027: ['FBtr0087355'] 2021-10-25 09:35:11.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034027 has a single transcript. 2021-10-25 09:35:11.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050031: ['FBtr0088123'] 2021-10-25 09:35:11.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050031 has a single transcript. 2021-10-25 09:35:11.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11720532, 11720583), (11721027, 11721198), (11722183, 11722250), (11722408, 11722533)] 2021-10-25 09:35:11.125 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11720244, 11721027, 'FBtr0073552_exon_1') contains intron (11720532, 11720583) 2021-10-25 09:35:11.126 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11720483, 11721027, 'FBtr0073553_exon_1') contains intron (11720532, 11720583) 2021-10-25 09:35:11.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073552_exon_1', 'FBtr0073553_exon_1'] 2021-10-25 09:35:11.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034029: ['FBtr0087336'] 2021-10-25 09:35:11.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034029 has a single transcript. 2021-10-25 09:35:11.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004832: ['FBtr0070670'] 2021-10-25 09:35:11.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004832 has a single transcript. 2021-10-25 09:35:11.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9349629, 9349687)] 2021-10-25 09:35:11.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004837: ['FBtr0080700', 'FBtr0346621'] 2021-10-25 09:35:11.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050033: ['FBtr0088117', 'FBtr0303156'] 2021-10-25 09:35:11.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034030: ['FBtr0087354'] 2021-10-25 09:35:11.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034030 has a single transcript. 2021-10-25 09:35:11.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8993450, 8993535), (8993622, 8993698), (8994460, 8994526)] 2021-10-25 09:35:11.145 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034031: ['FBtr0087337', 'FBtr0113082', 'FBtr0113083', 'FBtr0300777', 'FBtr0331963', 'FBtr0331964', 'FBtr0331965', 'FBtr0306568', 'FBtr0306569', 'FBtr0306570', 'FBtr0306571', 'FBtr0306572', 'FBtr0306573'] 2021-10-25 09:35:11.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15040320, 15041094), (15041975, 15042033), (15042241, 15042306)] 2021-10-25 09:35:11.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11292650, 11292709)] 2021-10-25 09:35:11.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263083: ['FBtr0307099'] 2021-10-25 09:35:11.195 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263083 has a single transcript. 2021-10-25 09:35:11.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037650: ['FBtr0300742'] 2021-10-25 09:35:11.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037650 has a single transcript. 2021-10-25 09:35:11.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263084: ['FBtr0307100'] 2021-10-25 09:35:11.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263084 has a single transcript. 2021-10-25 09:35:11.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037652: ['FBtr0081962', 'FBtr0081963', 'FBtr0081964'] 2021-10-25 09:35:11.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263085: ['FBtr0342850'] 2021-10-25 09:35:11.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263085 has a single transcript. 2021-10-25 09:35:11.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263086: ['FBtr0307101'] 2021-10-25 09:35:11.224 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263086 has a single transcript. 2021-10-25 09:35:11.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030331: ['FBtr0112979'] 2021-10-25 09:35:11.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030331 has a single transcript. 2021-10-25 09:35:11.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263087: ['FBtr0307103', 'FBtr0308135'] 2021-10-25 09:35:11.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030332: ['FBtr0073613'] 2021-10-25 09:35:11.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030332 has a single transcript. 2021-10-25 09:35:11.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030334: ['FBtr0073556', 'FBtr0073557', 'FBtr0346276', 'FBtr0346277'] 2021-10-25 09:35:11.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004838: ['FBtr0079346', 'FBtr0079347', 'FBtr0079348', 'FBtr0307030', 'FBtr0307031', 'FBtr0307032', 'FBtr0301403', 'FBtr0301404'] 2021-10-25 09:35:11.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050035: ['FBtr0088073', 'FBtr0088074'] 2021-10-25 09:35:11.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9004075, 9004141), (9004075, 9004138), (9004451, 9004508)] 2021-10-25 09:35:11.276 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11485031, 11485180), (11485754, 11486081), (11486221, 11486291)] 2021-10-25 09:35:11.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0243586: ['FBtr0085036'] 2021-10-25 09:35:11.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0243586 has a single transcript. 2021-10-25 09:35:11.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250731: ['FBtr0346901'] 2021-10-25 09:35:11.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250731 has a single transcript. 2021-10-25 09:35:11.309 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11665817, 11668421), (11668680, 11669266), (11670201, 11671029), (11671180, 11672716), (11672298, 11672716), (11672842, 11673044), (11673830, 11673889), (11674175, 11674243)] 2021-10-25 09:35:11.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250732: ['FBtr0091512', 'FBtr0114531', 'FBtr0334671'] 2021-10-25 09:35:11.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263088: ['FBtr0307106'] 2021-10-25 09:35:11.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263088 has a single transcript. 2021-10-25 09:35:11.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263089: ['FBtr0307107', 'FBtr0345721'] 2021-10-25 09:35:11.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11788336, 11788770), (11789103, 11790857), (11790995, 11791060), (11791184, 11791357)] 2021-10-25 09:35:11.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050036: ['FBtr0088050'] 2021-10-25 09:35:11.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050036 has a single transcript. 2021-10-25 09:35:11.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050037: ['FBtr0088049'] 2021-10-25 09:35:11.372 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050037 has a single transcript. 2021-10-25 09:35:11.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037653: ['FBtr0081965'] 2021-10-25 09:35:11.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037653 has a single transcript. 2021-10-25 09:35:11.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7146883, 7146944), (7147092, 7147677), (7147092, 7147330), (7149632, 7150165)] 2021-10-25 09:35:11.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050039: ['FBtr0088023'] 2021-10-25 09:35:11.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050039 has a single transcript. 2021-10-25 09:35:11.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037654: ['FBtr0081966', 'FBtr0336754'] 2021-10-25 09:35:11.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050042: ['FBtr0087914'] 2021-10-25 09:35:11.386 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050042 has a single transcript. 2021-10-25 09:35:11.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050043: ['FBtr0087907'] 2021-10-25 09:35:11.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050043 has a single transcript. 2021-10-25 09:35:11.398 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15202328, 15203446)] 2021-10-25 09:35:11.399 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.399 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050044: ['FBtr0113358'] 2021-10-25 09:35:11.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050044 has a single transcript. 2021-10-25 09:35:11.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050045: ['FBtr0113359'] 2021-10-25 09:35:11.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050045 has a single transcript. 2021-10-25 09:35:11.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050046: ['FBtr0087895', 'FBtr0339627'] 2021-10-25 09:35:11.422 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9008630, 9008713), (9008905, 9008963)] 2021-10-25 09:35:11.423 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.423 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6920861, 6922730), (6920861, 6923783), (6920861, 6922734), (6921073, 6922730), (6921440, 6922730), (6921440, 6923783), (6921673, 6922730), (6921798, 6922730), (6922826, 6923783), (6924400, 6924684), (6925564, 6927980)] 2021-10-25 09:35:11.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6924684, 6928675, 'FBtr0307030_exon_3') contains intron (6925564, 6927980) 2021-10-25 09:35:11.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6924684, 6932057, 'FBtr0307032_exon_4') contains intron (6925564, 6927980) 2021-10-25 09:35:11.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307030_exon_3', 'FBtr0307032_exon_4'] 2021-10-25 09:35:11.455 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263090: ['FBtr0307108', 'FBtr0345440'] 2021-10-25 09:35:11.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12314380, 12314621), (12315019, 12315078), (12315291, 12315352), (12315607, 12315665), (12315837, 12315889)] 2021-10-25 09:35:11.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.468 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15555557, 15555612), (15555649, 15561814), (15555857, 15555923), (15556014, 15561814), (15556357, 15556414), (15556478, 15561814), (15556656, 15556714), (15556814, 15561814), (15557047, 15557528), (15557047, 15557243), (15557310, 15561814), (15557607, 15561814), (15557711, 15557785), (15557934, 15558007), (15558170, 15561814), (15558406, 15558473), (15558588, 15561814), (15559722, 15561814), (15559998, 15560097), (15560203, 15561814), (15560522, 15560592), (15560656, 15561814), (15561113, 15561814), (15561280, 15561362), (15561417, 15561814)] 2021-10-25 09:35:11.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.469 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037655: ['FBtr0300743', 'FBtr0300744', 'FBtr0300745', 'FBtr0300746', 'FBtr0300747', 'FBtr0300748'] 2021-10-25 09:35:11.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250746: ['FBtr0078805', 'FBtr0078806'] 2021-10-25 09:35:11.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18293945, 18293998)] 2021-10-25 09:35:11.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.495 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030336: ['FBtr0073607', 'FBtr0345160', 'FBtr0339749'] 2021-10-25 09:35:11.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050047: ['FBtr0087905'] 2021-10-25 09:35:11.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050047 has a single transcript. 2021-10-25 09:35:11.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050048: ['FBtr0332424', 'FBtr0332425'] 2021-10-25 09:35:11.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5357283, 5357354), (5357856, 5357923)] 2021-10-25 09:35:11.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263091: ['FBtr0307110'] 2021-10-25 09:35:11.555 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263091 has a single transcript. 2021-10-25 09:35:11.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263092: ['FBtr0307111'] 2021-10-25 09:35:11.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263092 has a single transcript. 2021-10-25 09:35:11.572 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11810463, 11810530), (11810858, 11810928), (11811341, 11811651), (11812603, 11813287), (11813467, 11814696), (11814881, 11815169), (11815539, 11816425), (11815539, 11816421)] 2021-10-25 09:35:11.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.573 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.580 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12395569, 12395624), (12395569, 12395619), (12395974, 12396032), (12395979, 12396032)] 2021-10-25 09:35:11.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263093: ['FBtr0307112', 'FBtr0334486'] 2021-10-25 09:35:11.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250753: ['FBtr0078744', 'FBtr0078745', 'FBtr0078746', 'FBtr0078747', 'FBtr0078748', 'FBtr0078749', 'FBtr0078750'] 2021-10-25 09:35:11.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(905578, 906893), (907047, 907114)] 2021-10-25 09:35:11.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9011252, 9011362), (9011604, 9011673), (9011949, 9012044), (9012305, 9012836), (9013261, 9013315), (9013492, 9014129), (9013492, 9014244), (9013492, 9013839), (9013492, 9014752), (9013492, 9013578), (9013492, 9014867)] 2021-10-25 09:35:11.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.631 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050049: ['FBtr0087906'] 2021-10-25 09:35:11.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050049 has a single transcript. 2021-10-25 09:35:11.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050050: ['FBtr0289993'] 2021-10-25 09:35:11.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050050 has a single transcript. 2021-10-25 09:35:11.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050051: ['FBtr0114521'] 2021-10-25 09:35:11.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050051 has a single transcript. 2021-10-25 09:35:11.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050052: ['FBtr0087872'] 2021-10-25 09:35:11.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050052 has a single transcript. 2021-10-25 09:35:11.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050053: ['FBtr0087873'] 2021-10-25 09:35:11.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050053 has a single transcript. 2021-10-25 09:35:11.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030338: ['FBtr0073606'] 2021-10-25 09:35:11.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030338 has a single transcript. 2021-10-25 09:35:11.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050054: ['FBtr0302388', 'FBtr0302389'] 2021-10-25 09:35:11.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263094: ['FBtr0307109'] 2021-10-25 09:35:11.691 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263094 has a single transcript. 2021-10-25 09:35:11.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030339: ['FBtr0073565', 'FBtr0333016'] 2021-10-25 09:35:11.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263095: ['FBtr0307113'] 2021-10-25 09:35:11.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263095 has a single transcript. 2021-10-25 09:35:11.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263096: ['FBtr0307120'] 2021-10-25 09:35:11.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263096 has a single transcript. 2021-10-25 09:35:11.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263102: ['FBtr0088276', 'FBtr0088277', 'FBtr0088281', 'FBtr0088278', 'FBtr0088280', 'FBtr0088282', 'FBtr0100606', 'FBtr0088279', 'FBtr0088275', 'FBtr0100607', 'FBtr0330607', 'FBtr0346958'] 2021-10-25 09:35:11.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12623843, 12623901), (12624086, 12624148), (12624303, 12624363), (12624492, 12624562), (12624692, 12624753), (12624907, 12624983), (12625091, 12625269)] 2021-10-25 09:35:11.731 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12623778, 12624086, 'FBtr0302389_exon_1') contains intron (12623843, 12623901) 2021-10-25 09:35:11.732 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302389_exon_1'] 2021-10-25 09:35:11.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11839797, 11839857), (11840203, 11840261), (11840672, 11840726), (11840850, 11840909)] 2021-10-25 09:35:11.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004839: ['FBtr0088028', 'FBtr0344879'] 2021-10-25 09:35:11.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050055: ['FBtr0345021', 'FBtr0303918', 'FBtr0303919'] 2021-10-25 09:35:11.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030340: ['FBtr0303268'] 2021-10-25 09:35:11.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030340 has a single transcript. 2021-10-25 09:35:11.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030341: ['FBtr0073604', 'FBtr0334455'] 2021-10-25 09:35:11.817 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5596122, 5596860), (5597203, 5597271), (5597515, 5597771), (5597937, 5598203), (5598342, 5598943), (5599044, 5599115), (5599364, 5601014), (5599364, 5600037), (5599364, 5600287), (5600167, 5600287), (5600308, 5600487)] 2021-10-25 09:35:11.818 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5600287, 5600571, 'FBtr0078746_exon_1') contains intron (5600308, 5600487) 2021-10-25 09:35:11.818 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5600287, 5600571, 'FBtr0078747_exon_1') contains intron (5600308, 5600487) 2021-10-25 09:35:11.819 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5600037, 5600571, 'FBtr0078748_exon_1') contains intron (5600167, 5600287) 2021-10-25 09:35:11.819 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5600037, 5600308, 'FBtr0078749_exon_2') contains intron (5600167, 5600287) 2021-10-25 09:35:11.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078746_exon_1', 'FBtr0078747_exon_1', 'FBtr0078748_exon_1', 'FBtr0078749_exon_2'] 2021-10-25 09:35:11.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12002217, 12002386), (12002315, 12002386), (12002723, 12002784), (12004217, 12005188), (12006078, 12013758), (12013920, 12013989), (12014124, 12018877)] 2021-10-25 09:35:11.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.865 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12590339, 12590438)] 2021-10-25 09:35:11.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11852339, 11852420)] 2021-10-25 09:35:11.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037656: ['FBtr0081967'] 2021-10-25 09:35:11.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037656 has a single transcript. 2021-10-25 09:35:11.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004841: ['FBtr0082315', 'FBtr0112789'] 2021-10-25 09:35:11.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037657: ['FBtr0081968', 'FBtr0300415'] 2021-10-25 09:35:11.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030342: ['FBtr0073602', 'FBtr0073603'] 2021-10-25 09:35:11.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9038922, 9039670), (9040092, 9040167), (9041311, 9041470), (9041633, 9041700), (9041842, 9041904)] 2021-10-25 09:35:11.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10738487, 10738640), (10738759, 10738938), (10739286, 10739427), (10739508, 10741188), (10741323, 10741415), (10741629, 10741830), (10741976, 10750097)] 2021-10-25 09:35:11.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.949 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10737591, 10738759, 'FBtr0112789_exon_7') contains intron (10738487, 10738640) 2021-10-25 09:35:11.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112789_exon_7'] 2021-10-25 09:35:11.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11853341, 11853400), (11854678, 11854835)] 2021-10-25 09:35:11.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:11.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:11.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050056: ['FBtr0087823'] 2021-10-25 09:35:11.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050056 has a single transcript. 2021-10-25 09:35:11.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050058: ['FBtr0087767', 'FBtr0346512'] 2021-10-25 09:35:11.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10558376, 10561685), (10558533, 10561685), (10561954, 10562025), (10562190, 10610549), (10569049, 10570073), (10569378, 10570073), (10569378, 10569806), (10570142, 10610549), (10583948, 10610549), (10584123, 10610549), (10611515, 10611679), (10611818, 10611914), (10612454, 10612736), (10612931, 10612979), (10612931, 10612985), (10613375, 10613767), (10613870, 10613942), (10614126, 10614532), (10614126, 10614547)] 2021-10-25 09:35:11.990 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088277_exon_6') contains intron (10612931, 10612979) 2021-10-25 09:35:11.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088281_exon_5') contains intron (10612931, 10612979) 2021-10-25 09:35:11.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088278_exon_5') contains intron (10612931, 10612979) 2021-10-25 09:35:11.991 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088280_exon_6') contains intron (10612931, 10612979) 2021-10-25 09:35:11.992 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088282_exon_7') contains intron (10612931, 10612979) 2021-10-25 09:35:11.992 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10610549, 10611818, 'FBtr0100606_exon_2') contains intron (10611515, 10611679) 2021-10-25 09:35:11.993 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0100606_exon_4') contains intron (10612931, 10612979) 2021-10-25 09:35:11.993 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088279_exon_6') contains intron (10612931, 10612979) 2021-10-25 09:35:11.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0088275_exon_7') contains intron (10612931, 10612979) 2021-10-25 09:35:11.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10610549, 10611818, 'FBtr0100607_exon_2') contains intron (10611515, 10611679) 2021-10-25 09:35:11.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10612736, 10613375, 'FBtr0100607_exon_4') contains intron (10612931, 10612979) 2021-10-25 09:35:11.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088277_exon_6', 'FBtr0088281_exon_5', 'FBtr0088278_exon_5', 'FBtr0088280_exon_6', 'FBtr0088282_exon_7', 'FBtr0100606_exon_2', 'FBtr0100606_exon_4', 'FBtr0088279_exon_6', 'FBtr0088275_exon_7', 'FBtr0100607_exon_2', 'FBtr0100607_exon_4'] 2021-10-25 09:35:11.995 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037659: ['FBtr0300691', 'FBtr0336758', 'FBtr0336759', 'FBtr0336760'] 2021-10-25 09:35:12.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004842: ['FBtr0085100', 'FBtr0345267', 'FBtr0345268'] 2021-10-25 09:35:12.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13209958, 13210061), (13210197, 13210255), (13210407, 13210458), (13210699, 13210840), (13210979, 13211034), (13211141, 13211206), (13211517, 13211593), (13211729, 13211793), (13212011, 13212066)] 2021-10-25 09:35:12.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.023 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030343: ['FBtr0273257', 'FBtr0334454'] 2021-10-25 09:35:12.038 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330607': ['FBtr0346958']} 2021-10-25 09:35:12.038 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346958']] 2021-10-25 09:35:12.070 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11856321, 11860762), (11862009, 11862079), (11862871, 11862936)] 2021-10-25 09:35:12.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034032: ['FBtr0087353'] 2021-10-25 09:35:12.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034032 has a single transcript. 2021-10-25 09:35:12.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050062: ['FBtr0303158'] 2021-10-25 09:35:12.077 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050062 has a single transcript. 2021-10-25 09:35:12.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034033: ['FBtr0087349', 'FBtr0340005'] 2021-10-25 09:35:12.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050065: ['FBtr0087663'] 2021-10-25 09:35:12.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050065 has a single transcript. 2021-10-25 09:35:12.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26997342, 27027919), (27028677, 27029789), (27029906, 27030652), (27030851, 27056703), (27056772, 27056828), (27057051, 27057382), (27057121, 27057382), (27057474, 27057651)] 2021-10-25 09:35:12.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050067: ['FBtr0087557', 'FBtr0087558'] 2021-10-25 09:35:12.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9052575, 9053535), (9052627, 9053535), (9053408, 9053535), (9053475, 9053535), (9053759, 9057929), (9058090, 9058329), (9059708, 9059769), (9060530, 9060599)] 2021-10-25 09:35:12.096 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250754: ['FBtr0290134'] 2021-10-25 09:35:12.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250754 has a single transcript. 2021-10-25 09:35:12.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15573391, 15573449), (15573610, 15573665)] 2021-10-25 09:35:12.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030344: ['FBtr0073601'] 2021-10-25 09:35:12.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030344 has a single transcript. 2021-10-25 09:35:12.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14370729, 14370786), (14370870, 14370928)] 2021-10-25 09:35:12.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250755: ['FBtr0290135'] 2021-10-25 09:35:12.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250755 has a single transcript. 2021-10-25 09:35:12.138 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14370330, 14370870, 'FBtr0087558_exon_2') contains intron (14370729, 14370786) 2021-10-25 09:35:12.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087558_exon_2'] 2021-10-25 09:35:12.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030345: ['FBtr0073567', 'FBtr0330413'] 2021-10-25 09:35:12.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250757: ['FBtr0290137', 'FBtr0290138', 'FBtr0290139', 'FBtr0290140', 'FBtr0290141'] 2021-10-25 09:35:12.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11869339, 11869481), (11869658, 11869739)] 2021-10-25 09:35:12.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034035: ['FBtr0087342'] 2021-10-25 09:35:12.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034035 has a single transcript. 2021-10-25 09:35:12.195 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073567': ['FBtr0330413']} 2021-10-25 09:35:12.196 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330413']] 2021-10-25 09:35:12.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050069: ['FBtr0087530'] 2021-10-25 09:35:12.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050069 has a single transcript. 2021-10-25 09:35:12.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004852: ['FBtr0074897', 'FBtr0304746'] 2021-10-25 09:35:12.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030346: ['FBtr0073600'] 2021-10-25 09:35:12.206 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030346 has a single transcript. 2021-10-25 09:35:12.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050072: ['FBtr0346514'] 2021-10-25 09:35:12.208 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050072 has a single transcript. 2021-10-25 09:35:12.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034045: ['FBtr0087310', 'FBtr0308817', 'FBtr0308818'] 2021-10-25 09:35:12.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050073: ['FBtr0303243'] 2021-10-25 09:35:12.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050073 has a single transcript. 2021-10-25 09:35:12.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030347: ['FBtr0073569', 'FBtr0331588'] 2021-10-25 09:35:12.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050074: ['FBtr0087554'] 2021-10-25 09:35:12.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050074 has a single transcript. 2021-10-25 09:35:12.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050075: ['FBtr0087555'] 2021-10-25 09:35:12.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050075 has a single transcript. 2021-10-25 09:35:12.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050076: ['FBtr0087513'] 2021-10-25 09:35:12.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050076 has a single transcript. 2021-10-25 09:35:12.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037660: ['FBtr0081995'] 2021-10-25 09:35:12.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037660 has a single transcript. 2021-10-25 09:35:12.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19939542, 19949261), (19949605, 19964267), (19964401, 19964621), (19964819, 19964879), (19965002, 19965726), (19965921, 19966228), (19966456, 19966733), (19966861, 19969081), (19969240, 19970859), (19971611, 19971923), (19972022, 19972852), (19972971, 19973340), (19973567, 19973635), (19973843, 19974267), (19974581, 19974668), (19974831, 19974889), (19975102, 19975370), (19975475, 19975598), (19975475, 19976090), (19975613, 19976090), (19976333, 19976863)] 2021-10-25 09:35:12.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.247 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050077: ['FBtr0301734'] 2021-10-25 09:35:12.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050077 has a single transcript. 2021-10-25 09:35:12.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037661: ['FBtr0081971'] 2021-10-25 09:35:12.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037661 has a single transcript. 2021-10-25 09:35:12.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050080: ['FBtr0087319', 'FBtr0302553'] 2021-10-25 09:35:12.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11873503, 11873881), (11874265, 11874386)] 2021-10-25 09:35:12.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037662: ['FBtr0081972'] 2021-10-25 09:35:12.263 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037662 has a single transcript. 2021-10-25 09:35:12.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037664: ['FBtr0081973', 'FBtr0333190'] 2021-10-25 09:35:12.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15845011, 15845303), (15845612, 15845683), (15846182, 15847139), (15846182, 15846916), (15847065, 15847139)] 2021-10-25 09:35:12.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25907129, 25907546), (25908192, 25910026), (25910186, 25914995), (25910186, 25917100), (25910186, 25910702), (25910186, 25919174), (25910768, 25910874), (25910926, 25911121), (25910926, 25913220), (25911344, 25911403), (25911653, 25911815), (25912199, 25912264), (25912452, 25912524), (25913443, 25913564), (25913814, 25913871), (25914255, 25914311), (25914499, 25914558), (25915061, 25915118), (25915170, 25915359), (25915427, 25915490), (25915645, 25915700), (25915950, 25916032), (25916413, 25916470), (25916643, 25916699), (25917166, 25917220), (25917272, 25917334), (25917402, 25917463), (25917618, 25917676), (25917926, 25917986), (25918367, 25918431), (25918601, 25918671), (25919240, 25919298), (25919573, 25919629), (25919879, 25919934), (25920315, 25920371), (25920541, 25920602)] 2021-10-25 09:35:12.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004854: ['FBtr0074429', 'FBtr0334458'] 2021-10-25 09:35:12.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15699618, 15699687), (15700015, 15701111), (15701323, 15701378), (15701572, 15701628)] 2021-10-25 09:35:12.313 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15699687, 15701323, 'FBtr0087319_exon_3') contains intron (15700015, 15701111) 2021-10-25 09:35:12.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087319_exon_3'] 2021-10-25 09:35:12.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030348: ['FBtr0331589'] 2021-10-25 09:35:12.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030348 has a single transcript. 2021-10-25 09:35:12.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9246942, 9247244), (9247321, 9248824), (9248435, 9248824), (9248973, 9249919), (9250199, 9250655), (9250979, 9251212)] 2021-10-25 09:35:12.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030349: ['FBtr0114451', 'FBtr0114452', 'FBtr0331591', 'FBtr0331594', 'FBtr0344702', 'FBtr0344703', 'FBtr0308070'] 2021-10-25 09:35:12.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17315911, 17320734), (17315911, 17320838), (17320774, 17320838), (17321091, 17322657)] 2021-10-25 09:35:12.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050081: ['FBtr0087365'] 2021-10-25 09:35:12.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050081 has a single transcript. 2021-10-25 09:35:12.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050082: ['FBtr0302917'] 2021-10-25 09:35:12.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050082 has a single transcript. 2021-10-25 09:35:12.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050083: ['FBtr0300381'] 2021-10-25 09:35:12.384 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050083 has a single transcript. 2021-10-25 09:35:12.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050085: ['FBtr0087306'] 2021-10-25 09:35:12.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050085 has a single transcript. 2021-10-25 09:35:12.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050087: ['FBtr0100573'] 2021-10-25 09:35:12.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050087 has a single transcript. 2021-10-25 09:35:12.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037665: ['FBtr0081974', 'FBtr0346096'] 2021-10-25 09:35:12.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034046: ['FBtr0087287', 'FBtr0340013', 'FBtr0308814', 'FBtr0308815'] 2021-10-25 09:35:12.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050088: ['FBtr0273296'] 2021-10-25 09:35:12.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050088 has a single transcript. 2021-10-25 09:35:12.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050089: ['FBtr0087285', 'FBtr0340007'] 2021-10-25 09:35:12.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004855: ['FBtr0082925', 'FBtr0309995', 'FBtr0346348'] 2021-10-25 09:35:12.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9252205, 9252349)] 2021-10-25 09:35:12.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15727926, 15732067), (15732968, 15735090), (15737060, 15755947), (15756132, 15757697), (15757926, 15758541), (15757926, 15760764), (15758634, 15760764)] 2021-10-25 09:35:12.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263106: ['FBtr0077124', 'FBtr0077123'] 2021-10-25 09:35:12.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14309122, 14309177), (14309122, 14309184)] 2021-10-25 09:35:12.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15794950, 15848509), (15849679, 15852387), (15852541, 15852670), (15852819, 15852881), (15853006, 15853064)] 2021-10-25 09:35:12.510 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037666: ['FBtr0303309'] 2021-10-25 09:35:12.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037666 has a single transcript. 2021-10-25 09:35:12.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037667: ['FBtr0302133'] 2021-10-25 09:35:12.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037667 has a single transcript. 2021-10-25 09:35:12.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037668: ['FBtr0081985'] 2021-10-25 09:35:12.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037668 has a single transcript. 2021-10-25 09:35:12.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5751600, 5751845)] 2021-10-25 09:35:12.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11878988, 11879049), (11879331, 11879397), (11879603, 11879670), (11880292, 11880355), (11880926, 11881209), (11881265, 11881329), (11881902, 11883187), (11881902, 11883100), (11883621, 11886955), (11883621, 11884322), (11883621, 11884797), (11884583, 11884797), (11885056, 11886955), (11885104, 11886955), (11885281, 11886955), (11887052, 11887109)] 2021-10-25 09:35:12.536 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5750028, 5752189, 'FBtr0077124_exon_1') contains intron (5751600, 5751845) 2021-10-25 09:35:12.536 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11886955, 11887162, 'FBtr0114451_exon_1') contains intron (11887052, 11887109) 2021-10-25 09:35:12.537 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077124_exon_1'] 2021-10-25 09:35:12.537 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11886955, 11887162, 'FBtr0114452_exon_1') contains intron (11887052, 11887109) 2021-10-25 09:35:12.537 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.537 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11886955, 11887162, 'FBtr0331594_exon_1') contains intron (11887052, 11887109) 2021-10-25 09:35:12.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11886955, 11887162, 'FBtr0344703_exon_1') contains intron (11887052, 11887109) 2021-10-25 09:35:12.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114451_exon_1', 'FBtr0114452_exon_1', 'FBtr0331594_exon_1', 'FBtr0344703_exon_1'] 2021-10-25 09:35:12.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037669: ['FBtr0081984'] 2021-10-25 09:35:12.541 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037669 has a single transcript. 2021-10-25 09:35:12.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037670: ['FBtr0081977', 'FBtr0339168'] 2021-10-25 09:35:12.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050090: ['FBtr0087279'] 2021-10-25 09:35:12.550 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050090 has a single transcript. 2021-10-25 09:35:12.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250785: ['FBtr0089947', 'FBtr0089945', 'FBtr0089946', 'FBtr0335146', 'FBtr0335501'] 2021-10-25 09:35:12.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050091: ['FBtr0087277'] 2021-10-25 09:35:12.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050091 has a single transcript. 2021-10-25 09:35:12.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050093: ['FBtr0087199'] 2021-10-25 09:35:12.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050093 has a single transcript. 2021-10-25 09:35:12.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050094: ['FBtr0087233'] 2021-10-25 09:35:12.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050094 has a single transcript. 2021-10-25 09:35:12.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050095: ['FBtr0087224'] 2021-10-25 09:35:12.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050095 has a single transcript. 2021-10-25 09:35:12.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050096: ['FBtr0289994'] 2021-10-25 09:35:12.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050096 has a single transcript. 2021-10-25 09:35:12.601 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9259187, 9259253), (9259341, 9259631), (9259703, 9259767), (9259956, 9260010), (9259956, 9260025)] 2021-10-25 09:35:12.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.602 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050098: ['FBtr0087168'] 2021-10-25 09:35:12.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050098 has a single transcript. 2021-10-25 09:35:12.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263108: ['FBtr0307301', 'FBtr0307302', 'FBtr0307304', 'FBtr0307305', 'FBtr0307306', 'FBtr0330148', 'FBtr0330149', 'FBtr0332096'] 2021-10-25 09:35:12.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004856: ['FBtr0071350', 'FBtr0333809'] 2021-10-25 09:35:12.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050099: ['FBtr0087180'] 2021-10-25 09:35:12.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050099 has a single transcript. 2021-10-25 09:35:12.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050100: ['FBtr0087140', 'FBtr0340022'] 2021-10-25 09:35:12.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9105331, 9105396), (9105957, 9106224)] 2021-10-25 09:35:12.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037671: ['FBtr0081978'] 2021-10-25 09:35:12.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037671 has a single transcript. 2021-10-25 09:35:12.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034047: ['FBtr0308816'] 2021-10-25 09:35:12.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034047 has a single transcript. 2021-10-25 09:35:12.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16291718, 16291773)] 2021-10-25 09:35:12.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037672: ['FBtr0081982', 'FBtr0346321'] 2021-10-25 09:35:12.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034049: ['FBtr0087298', 'FBtr0087299', 'FBtr0087300', 'FBtr0340017'] 2021-10-25 09:35:12.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20789423, 20789585), (20789423, 20789720), (20789660, 20789720), (20790052, 20790124), (20790335, 20790390), (20790552, 20790621), (20790720, 20791229), (20790720, 20791166), (20791664, 20792113), (20792266, 20794118), (20792266, 20796036), (20792266, 20794059), (20796134, 20796652)] 2021-10-25 09:35:12.691 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9263013, 9263074)] 2021-10-25 09:35:12.710 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050101: ['FBtr0086963'] 2021-10-25 09:35:12.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050101 has a single transcript. 2021-10-25 09:35:12.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004858: ['FBtr0080637', 'FBtr0342915'] 2021-10-25 09:35:12.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050103: ['FBtr0086929'] 2021-10-25 09:35:12.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050103 has a single transcript. 2021-10-25 09:35:12.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050104: ['FBtr0086927', 'FBtr0086928'] 2021-10-25 09:35:12.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14391939, 14392229), (14393058, 14408367), (14393061, 14408367)] 2021-10-25 09:35:12.762 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037675: ['FBtr0082016'] 2021-10-25 09:35:12.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037675 has a single transcript. 2021-10-25 09:35:12.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15923711, 15923773), (15924009, 15924078), (15924863, 15924921), (15925201, 15925263), (15925428, 15925494), (15925431, 15925494), (15926681, 15926744), (15927624, 15931736), (15927624, 15931523)] 2021-10-25 09:35:12.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037676: ['FBtr0301210', 'FBtr0300335'] 2021-10-25 09:35:12.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17485029, 17490936), (17485131, 17490936), (17491163, 17491214), (17491365, 17491424), (17491681, 17491738), (17492015, 17492088), (17492389, 17492450)] 2021-10-25 09:35:12.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3148687, 3149627), (3148737, 3149747), (3148921, 3149627), (3149160, 3149627), (3150153, 3150214), (3150842, 3150927), (3150857, 3150927), (3151172, 3151263), (3151184, 3151263), (3151372, 3155957), (3151372, 3152454), (3157141, 3157199)] 2021-10-25 09:35:12.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030350: ['FBtr0073570'] 2021-10-25 09:35:12.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030350 has a single transcript. 2021-10-25 09:35:12.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030351: ['FBtr0073571', 'FBtr0331590'] 2021-10-25 09:35:12.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9295551, 9295685), (9295743, 9326687), (9327312, 9328441), (9327331, 9328441)] 2021-10-25 09:35:12.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004859: ['FBtr0089178', 'FBtr0308074', 'FBtr0306168'] 2021-10-25 09:35:12.824 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0307301': ['FBtr0330148']} 2021-10-25 09:35:12.824 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330148']] 2021-10-25 09:35:12.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050105: ['FBtr0086899'] 2021-10-25 09:35:12.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050105 has a single transcript. 2021-10-25 09:35:12.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050106: ['FBtr0086893'] 2021-10-25 09:35:12.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050106 has a single transcript. 2021-10-25 09:35:12.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050108: ['FBtr0273298'] 2021-10-25 09:35:12.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050108 has a single transcript. 2021-10-25 09:35:12.860 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11888514, 11888571), (11888653, 11888715), (11888656, 11888715)] 2021-10-25 09:35:12.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050109: ['FBtr0340271'] 2021-10-25 09:35:12.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050109 has a single transcript. 2021-10-25 09:35:12.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050110: ['FBtr0086820'] 2021-10-25 09:35:12.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050110 has a single transcript. 2021-10-25 09:35:12.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050114: ['FBtr0086753'] 2021-10-25 09:35:12.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050114 has a single transcript. 2021-10-25 09:35:12.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037677: ['FBtr0082058'] 2021-10-25 09:35:12.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037677 has a single transcript. 2021-10-25 09:35:12.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(50462, 50515), (50613, 50744), (50680, 50744), (51257, 51313), (51954, 52016), (52384, 56290), (52384, 55830)] 2021-10-25 09:35:12.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037678: ['FBtr0082057'] 2021-10-25 09:35:12.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037678 has a single transcript. 2021-10-25 09:35:12.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050115: ['FBtr0300421', 'FBtr0340387', 'FBtr0310055'] 2021-10-25 09:35:12.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250786: ['FBtr0077674', 'FBtr0305980', 'FBtr0331654'] 2021-10-25 09:35:12.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037679: ['FBtr0082055', 'FBtr0082056'] 2021-10-25 09:35:12.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030352: ['FBtr0073572', 'FBtr0346165'] 2021-10-25 09:35:12.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034050: ['FBtr0087290'] 2021-10-25 09:35:12.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034050 has a single transcript. 2021-10-25 09:35:12.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034051: ['FBtr0087292', 'FBtr0087293', 'FBtr0087294', 'FBtr0087295', 'FBtr0302149', 'FBtr0306649', 'FBtr0306650', 'FBtr0306651'] 2021-10-25 09:35:12.943 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9332166, 9332538), (9332625, 9332682), (9332867, 9332929), (9333660, 9333720), (9333945, 9334293), (9334442, 9334510)] 2021-10-25 09:35:12.944 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9332063, 9332867, 'FBtr0082056_exon_5') contains intron (9332166, 9332538) 2021-10-25 09:35:12.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082056_exon_5'] 2021-10-25 09:35:12.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2980377, 2980469), (2980568, 2980635), (2980574, 2980635), (2985177, 2985239), (2985413, 2985475), (2985585, 2985640), (2986150, 2987386), (2986150, 2987511)] 2021-10-25 09:35:12.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18556410, 18556723), (18556410, 18557802), (18556984, 18557802), (18558016, 18558074), (18558220, 18558289), (18558443, 18558507), (18558673, 18559268), (18559463, 18559523), (18561168, 18610680), (18561168, 18582529)] 2021-10-25 09:35:12.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11892219, 11892288), (11892403, 11892729), (11893355, 11893589)] 2021-10-25 09:35:12.963 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:12.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:12.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004860: ['FBtr0070433', 'FBtr0112843'] 2021-10-25 09:35:13.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037680: ['FBtr0082017', 'FBtr0082018', 'FBtr0082019'] 2021-10-25 09:35:13.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030354: ['FBtr0073596', 'FBtr0342744'] 2021-10-25 09:35:13.033 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2117617, 2117680), (2119491, 2119550), (2120001, 2120062), (2121624, 2121686), (2121624, 2122981)] 2021-10-25 09:35:13.034 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050120: ['FBtr0299806'] 2021-10-25 09:35:13.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050120 has a single transcript. 2021-10-25 09:35:13.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11901279, 11901348), (11904681, 11904743), (11904947, 11905034), (11904976, 11905034)] 2021-10-25 09:35:13.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9335252, 9335499), (9335252, 9335496), (9335635, 9335700), (9335839, 9335899), (9336029, 9336157), (9336252, 9336482), (9336719, 9336778)] 2021-10-25 09:35:13.070 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9335241, 9335635, 'FBtr0082019_exon_1') contains intron (9335252, 9335499) 2021-10-25 09:35:13.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082019_exon_1'] 2021-10-25 09:35:13.070 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050121: ['FBtr0308920'] 2021-10-25 09:35:13.075 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050121 has a single transcript. 2021-10-25 09:35:13.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250788: ['FBtr0074454', 'FBtr0334404', 'FBtr0334405'] 2021-10-25 09:35:13.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263109: ['FBtr0307307'] 2021-10-25 09:35:13.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263109 has a single transcript. 2021-10-25 09:35:13.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050122: ['FBtr0086660', 'FBtr0300923', 'FBtr0300924'] 2021-10-25 09:35:13.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004861: ['FBtr0070432', 'FBtr0301515', 'FBtr0343589', 'FBtr0345598'] 2021-10-25 09:35:13.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15936580, 15937020), (15936580, 15937678), (15936580, 15938446), (15936583, 15938446), (15936583, 15938114), (15937326, 15937678), (15937879, 15938446), (15938267, 15938446), (15938978, 15939036), (15939257, 15939774), (15939257, 15939309), (15939257, 15939909)] 2021-10-25 09:35:13.107 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.107 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263110: ['FBtr0307309', 'FBtr0307310', 'FBtr0307311', 'FBtr0307312'] 2021-10-25 09:35:13.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030356: ['FBtr0073593'] 2021-10-25 09:35:13.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030356 has a single transcript. 2021-10-25 09:35:13.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030357: ['FBtr0073591', 'FBtr0302182', 'FBtr0331748'] 2021-10-25 09:35:13.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18632983, 18633053), (18632986, 18633053), (18633124, 18633191), (18633127, 18633191), (18633363, 18633425), (18634285, 18634769), (18634941, 18636142), (18636271, 18636339), (18636821, 18636887), (18637739, 18637846), (18638617, 18638818)] 2021-10-25 09:35:13.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17657533, 17660988), (17657537, 17660988), (17667232, 17667300), (17667497, 17667569), (17667738, 17668106), (17667738, 17667932), (17667738, 17668275), (17668157, 17668275), (17668382, 17668496), (17668663, 17668750)] 2021-10-25 09:35:13.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037683: ['FBtr0082025'] 2021-10-25 09:35:13.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037683 has a single transcript. 2021-10-25 09:35:13.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037684: ['FBtr0082026', 'FBtr0082027'] 2021-10-25 09:35:13.194 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2127560, 2127623), (2129407, 2129466), (2129917, 2129978), (2131726, 2136016), (2131726, 2136465), (2131726, 2137657), (2136210, 2136455)] 2021-10-25 09:35:13.195 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2136016, 2136622, 'FBtr0070432_exon_1') contains intron (2136210, 2136455) 2021-10-25 09:35:13.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070432_exon_1'] 2021-10-25 09:35:13.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11920186, 11920243), (11920337, 11920409), (11920581, 11920652), (11921004, 11921783), (11921931, 11921997), (11922165, 11922229), (11922373, 11924157), (11922373, 11922587)] 2021-10-25 09:35:13.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.201 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4194335, 4194557), (4194914, 4194977), (4195164, 4195298), (4195387, 4195840), (4195387, 4195589), (4195715, 4195840), (4195990, 4196046), (4196307, 4196361), (4196684, 4196747), (4196955, 4197012), (4197627, 4197683), (4198934, 4198995), (4199596, 4199649), (4199882, 4199940), (4200568, 4200630), (4200818, 4205225), (4205533, 4216583), (4216727, 4216790), (4217178, 4217236), (4217405, 4217469), (4217594, 4217656), (4217964, 4218021), (4218302, 4218363), (4218715, 4218767), (4219345, 4222190), (4222368, 4222426)] 2021-10-25 09:35:13.202 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4195298, 4195715, 'FBtr0307311_exon_4') contains intron (4195387, 4195589) 2021-10-25 09:35:13.202 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4195298, 4195715, 'FBtr0307312_exon_3') contains intron (4195387, 4195589) 2021-10-25 09:35:13.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307311_exon_4', 'FBtr0307312_exon_3'] 2021-10-25 09:35:13.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9365699, 9365755), (9365826, 9366381), (9366289, 9366381), (9366832, 9366889), (9367182, 9367246)] 2021-10-25 09:35:13.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050125: ['FBtr0086595'] 2021-10-25 09:35:13.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050125 has a single transcript. 2021-10-25 09:35:13.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050145: ['FBtr0086265'] 2021-10-25 09:35:13.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050145 has a single transcript. 2021-10-25 09:35:13.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037685: ['FBtr0082028'] 2021-10-25 09:35:13.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037685 has a single transcript. 2021-10-25 09:35:13.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250789: ['FBtr0072789', 'FBtr0332878', 'FBtr0332879', 'FBtr0332880'] 2021-10-25 09:35:13.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050147: ['FBtr0086255', 'FBtr0086256'] 2021-10-25 09:35:13.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030358: ['FBtr0073590'] 2021-10-25 09:35:13.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030358 has a single transcript. 2021-10-25 09:35:13.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037686: ['FBtr0082049', 'FBtr0082050', 'FBtr0339176', 'FBtr0339177'] 2021-10-25 09:35:13.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030359: ['FBtr0073581'] 2021-10-25 09:35:13.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030359 has a single transcript. 2021-10-25 09:35:13.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030360: ['FBtr0073574', 'FBtr0339626'] 2021-10-25 09:35:13.333 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20607582, 20607669), (20607833, 20607893), (20608007, 20608135), (20608622, 20608681), (20609676, 20613064), (20613264, 20613329), (20613471, 20614505), (20614933, 20618066), (20614933, 20618129)] 2021-10-25 09:35:13.334 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.334 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004862: ['FBtr0084087'] 2021-10-25 09:35:13.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004862 has a single transcript. 2021-10-25 09:35:13.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004863: ['FBtr0084111'] 2021-10-25 09:35:13.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004863 has a single transcript. 2021-10-25 09:35:13.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004864: ['FBtr0073457'] 2021-10-25 09:35:13.369 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004864 has a single transcript. 2021-10-25 09:35:13.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004865: ['FBtr0078306', 'FBtr0078307', 'FBtr0306157', 'FBtr0306158'] 2021-10-25 09:35:13.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263111: ['FBtr0307313', 'FBtr0307314', 'FBtr0307315', 'FBtr0307316', 'FBtr0307317', 'FBtr0307318', 'FBtr0307319', 'FBtr0307320', 'FBtr0307321', 'FBtr0307322', 'FBtr0307323', 'FBtr0307324', 'FBtr0307325', 'FBtr0308609', 'FBtr0332391'] 2021-10-25 09:35:13.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12007196, 12007262), (12007401, 12008166), (12008704, 12008769), (12008896, 12009022), (12009174, 12009240), (12009572, 12009631)] 2021-10-25 09:35:13.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12007175, 12007401, 'FBtr0073574_exon_1') contains intron (12007196, 12007262) 2021-10-25 09:35:13.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073574_exon_1'] 2021-10-25 09:35:13.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1779310, 1779384), (1779985, 1780886), (1779985, 1781094), (1780916, 1781094), (1781698, 1781758), (1783682, 1784906), (1783682, 1784502), (1784598, 1784906), (1788957, 1789016), (1789101, 1795198)] 2021-10-25 09:35:13.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9400878, 9400941), (9401022, 9401195)] 2021-10-25 09:35:13.452 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9400941, 9401202, 'FBtr0082050_exon_1') contains intron (9401022, 9401195) 2021-10-25 09:35:13.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082050_exon_1'] 2021-10-25 09:35:13.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050148: ['FBtr0086266', 'FBtr0342706'] 2021-10-25 09:35:13.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21226662, 21227257), (21226806, 21227257), (21228391, 21230879), (21231112, 21231168), (21231310, 21262995), (21240803, 21262995), (21263636, 21263711), (21263987, 21264045)] 2021-10-25 09:35:13.488 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.489 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030361: ['FBtr0073579', 'FBtr0346737'] 2021-10-25 09:35:13.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034052: ['FBtr0087291'] 2021-10-25 09:35:13.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034052 has a single transcript. 2021-10-25 09:35:13.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:13.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034053: ['FBtr0114558'] 2021-10-25 09:35:13.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034053 has a single transcript. 2021-10-25 09:35:13.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034054: ['FBtr0087201'] 2021-10-25 09:35:13.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034054 has a single transcript. 2021-10-25 09:35:13.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034057: ['FBtr0087268'] 2021-10-25 09:35:13.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034057 has a single transcript. 2021-10-25 09:35:13.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034058: ['FBtr0087267'] 2021-10-25 09:35:13.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034058 has a single transcript. 2021-10-25 09:35:13.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034059: ['FBtr0087202'] 2021-10-25 09:35:13.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034059 has a single transcript. 2021-10-25 09:35:13.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12010601, 12010672), (12010866, 12010947), (12011933, 12011993)] 2021-10-25 09:35:13.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034060: ['FBtr0087203', 'FBtr0340015'] 2021-10-25 09:35:13.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050151: ['FBtr0086269'] 2021-10-25 09:35:13.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050151 has a single transcript. 2021-10-25 09:35:13.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050154: ['FBtr0086215'] 2021-10-25 09:35:13.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050154 has a single transcript. 2021-10-25 09:35:13.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050155: ['FBtr0086234'] 2021-10-25 09:35:13.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050155 has a single transcript. 2021-10-25 09:35:13.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050156: ['FBtr0086184', 'FBtr0336745'] 2021-10-25 09:35:13.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16002498, 16002551), (16006251, 16006309)] 2021-10-25 09:35:13.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.593 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037687: ['FBtr0082029'] 2021-10-25 09:35:13.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037687 has a single transcript. 2021-10-25 09:35:13.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030362: ['FBtr0073575', 'FBtr0073576', 'FBtr0073577', 'FBtr0073578'] 2021-10-25 09:35:13.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037688: ['FBtr0082047', 'FBtr0082048'] 2021-10-25 09:35:13.627 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6981685, 6981742), (6981909, 6981968), (6982749, 6985411)] 2021-10-25 09:35:13.628 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250791: ['FBtr0074840'] 2021-10-25 09:35:13.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250791 has a single transcript. 2021-10-25 09:35:13.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250814: ['FBtr0075309', 'FBtr0331557'] 2021-10-25 09:35:13.645 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9402773, 9402842), (9404178, 9404237)] 2021-10-25 09:35:13.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.646 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004867: ['FBtr0079905', 'FBtr0330682', 'FBtr0345436'] 2021-10-25 09:35:13.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034061: ['FBtr0087264'] 2021-10-25 09:35:13.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034061 has a single transcript. 2021-10-25 09:35:13.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034062: ['FBtr0087263'] 2021-10-25 09:35:13.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034062 has a single transcript. 2021-10-25 09:35:13.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034063: ['FBtr0087204', 'FBtr0087205'] 2021-10-25 09:35:13.681 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12012528, 12016002), (12014521, 12016002), (12015566, 12016002), (12015624, 12016002), (12016721, 12016778)] 2021-10-25 09:35:13.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050157: ['FBtr0086186', 'FBtr0345010'] 2021-10-25 09:35:13.687 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16584444, 16584588), (16584722, 16584778), (16585082, 16585184)] 2021-10-25 09:35:13.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037689: ['FBtr0082030'] 2021-10-25 09:35:13.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037689 has a single transcript. 2021-10-25 09:35:13.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037690: ['FBtr0082045'] 2021-10-25 09:35:13.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037690 has a single transcript. 2021-10-25 09:35:13.713 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16008487, 16011954), (16011838, 16011954), (16012070, 16012140), (16012614, 16012672)] 2021-10-25 09:35:13.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9897131, 9897211), (9897131, 9897472)] 2021-10-25 09:35:13.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037696: ['FBtr0082044'] 2021-10-25 09:35:13.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037696 has a single transcript. 2021-10-25 09:35:13.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037697: ['FBtr0082041', 'FBtr0082042', 'FBtr0082043'] 2021-10-25 09:35:13.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6974228, 6974290)] 2021-10-25 09:35:13.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250815: ['FBtr0077040'] 2021-10-25 09:35:13.752 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250815 has a single transcript. 2021-10-25 09:35:13.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11935730, 11935799), (11936195, 11936260), (11936505, 11936691), (11936843, 11938920), (11936843, 11939694), (11939121, 11939694), (11939858, 11939920), (11940042, 11946494), (11940042, 11943102), (11940042, 11948627), (11943112, 11943803), (11944021, 11948627), (11946554, 11948627), (11948836, 11949051), (11949254, 11949875), (11950157, 11952128), (11950157, 11953665), (11952223, 11954098), (11953757, 11954098), (11954281, 11960074), (11954281, 11962019), (11954281, 11956921), (11956924, 11960074), (11956924, 11962019), (11960080, 11962019), (11962103, 11962229), (11962340, 11962450), (11962615, 11964057), (11964259, 11964625), (11964769, 11968650), (11969214, 11970330), (11970666, 11971458), (11971972, 11972045), (11972243, 11973256), (11973361, 11973424), (11973484, 11974223), (11973484, 11975745), (11974339, 11976402), (11975861, 11976402), (11976506, 11976603), (11976824, 11976888), (11977044, 11979054), (11977044, 11977461), (11977562, 11979624), (11979155, 11979624), (11979764, 11979838), (11980157, 11980762), (11980157, 11984676), (11981176, 11983835), (11981176, 11983845)] 2021-10-25 09:35:13.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307313_exon_32') contains intron (11935730, 11935799) 2021-10-25 09:35:13.755 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307314_exon_32') contains intron (11935730, 11935799) 2021-10-25 09:35:13.756 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11931279, 11936195, 'FBtr0307315_exon_32') contains intron (11935730, 11935799) 2021-10-25 09:35:13.757 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307316_exon_32') contains intron (11935730, 11935799) 2021-10-25 09:35:13.758 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11931546, 11936195, 'FBtr0307317_exon_31') contains intron (11935730, 11935799) 2021-10-25 09:35:13.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307318_exon_31') contains intron (11935730, 11935799) 2021-10-25 09:35:13.761 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307319_exon_31') contains intron (11935730, 11935799) 2021-10-25 09:35:13.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11931546, 11936195, 'FBtr0307320_exon_33') contains intron (11935730, 11935799) 2021-10-25 09:35:13.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250816: ['FBtr0299880', 'FBtr0299881', 'FBtr0299882', 'FBtr0301725'] 2021-10-25 09:35:13.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307321_exon_31') contains intron (11935730, 11935799) 2021-10-25 09:35:13.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307322_exon_33') contains intron (11935730, 11935799) 2021-10-25 09:35:13.765 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307323_exon_34') contains intron (11935730, 11935799) 2021-10-25 09:35:13.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0307324_exon_31') contains intron (11935730, 11935799) 2021-10-25 09:35:13.768 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11931851, 11936195, 'FBtr0307325_exon_30') contains intron (11935730, 11935799) 2021-10-25 09:35:13.768 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11933704, 11936195, 'FBtr0308609_exon_33') contains intron (11935730, 11935799) 2021-10-25 09:35:13.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307313_exon_32', 'FBtr0307314_exon_32', 'FBtr0307315_exon_32', 'FBtr0307316_exon_32', 'FBtr0307317_exon_31', 'FBtr0307318_exon_31', 'FBtr0307319_exon_31', 'FBtr0307320_exon_33', 'FBtr0307321_exon_31', 'FBtr0307322_exon_33', 'FBtr0307323_exon_34', 'FBtr0307324_exon_31', 'FBtr0307325_exon_30', 'FBtr0308609_exon_33'] 2021-10-25 09:35:13.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034065: ['FBtr0087206'] 2021-10-25 09:35:13.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034065 has a single transcript. 2021-10-25 09:35:13.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034066: ['FBtr0087261'] 2021-10-25 09:35:13.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034066 has a single transcript. 2021-10-25 09:35:13.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050158: ['FBtr0086165'] 2021-10-25 09:35:13.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050158 has a single transcript. 2021-10-25 09:35:13.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9458125, 9458202), (9458533, 9458594), (9458772, 9459127), (9458772, 9460270)] 2021-10-25 09:35:13.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.787 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050159: ['FBtr0089760', 'FBtr0089761', 'FBtr0301713'] 2021-10-25 09:35:13.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034067: ['FBtr0087207', 'FBtr0340018'] 2021-10-25 09:35:13.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004868: ['FBtr0079862', 'FBtr0306169', 'FBtr0345433'] 2021-10-25 09:35:13.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030364: ['FBtr0073621'] 2021-10-25 09:35:13.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030364 has a single transcript. 2021-10-25 09:35:13.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030365: ['FBtr0073622'] 2021-10-25 09:35:13.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030365 has a single transcript. 2021-10-25 09:35:13.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16017857, 16021888), (16022376, 16022443), (16022778, 16022837), (16022989, 16023065), (16023687, 16023746), (16023859, 16024085), (16023859, 16024058), (16024214, 16024272)] 2021-10-25 09:35:13.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030366: ['FBtr0073641', 'FBtr0342732'] 2021-10-25 09:35:13.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23554689, 23566838), (23554890, 23566838), (23556048, 23566838), (23567214, 23568546), (23569958, 23583180), (23583364, 23618473), (23618639, 23634249), (23634382, 23649123), (23649372, 23689484)] 2021-10-25 09:35:13.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6993055, 6993120), (6993060, 6993120)] 2021-10-25 09:35:13.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.863 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9492545, 9492627), (9493103, 9494221)] 2021-10-25 09:35:13.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037698: ['FBtr0082125', 'FBtr0331349', 'FBtr0331350', 'FBtr0331351', 'FBtr0346097'] 2021-10-25 09:35:13.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12025045, 12025113), (12025057, 12025113), (12026511, 12026625), (12028039, 12028423)] 2021-10-25 09:35:13.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:13.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034068: ['FBtr0087259', 'FBtr0087260', 'FBtr0339756'] 2021-10-25 09:35:13.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030367: ['FBtr0073640'] 2021-10-25 09:35:13.945 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030367 has a single transcript. 2021-10-25 09:35:13.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030369: ['FBtr0073623'] 2021-10-25 09:35:13.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030369 has a single transcript. 2021-10-25 09:35:13.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050160: ['FBtr0086178'] 2021-10-25 09:35:13.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050160 has a single transcript. 2021-10-25 09:35:13.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030370: ['FBtr0073638'] 2021-10-25 09:35:13.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030370 has a single transcript. 2021-10-25 09:35:13.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050161: ['FBtr0072333'] 2021-10-25 09:35:13.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050161 has a single transcript. 2021-10-25 09:35:13.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030373: ['FBtr0073637'] 2021-10-25 09:35:13.970 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030373 has a single transcript. 2021-10-25 09:35:13.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004870: ['FBtr0072642', 'FBtr0333268', 'FBtr0333269', 'FBtr0333270'] 2021-10-25 09:35:13.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050163: ['FBtr0072334', 'FBtr0343491'] 2021-10-25 09:35:13.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030374: ['FBtr0300834', 'FBtr0300835'] 2021-10-25 09:35:13.979 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16025134, 16025190), (16025310, 16025372), (16025647, 16025708), (16025854, 16025912), (16026067, 16026134), (16026280, 16026338), (16026546, 16026610), (16026812, 16026866), (16027056, 16027134), (16027263, 16027336), (16027278, 16027336), (16027571, 16027664), (16027733, 16027883), (16027986, 16028104)] 2021-10-25 09:35:13.980 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:13.980 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.002 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9466631, 9467353), (9466631, 9467979), (9466631, 9468628), (9467440, 9467979), (9468404, 9468628), (9468787, 9468850), (9471901, 9471967), (9472339, 9472404), (9473164, 9473285), (9473404, 9474716), (9475381, 9475533), (9475840, 9478544), (9475840, 9486600), (9478697, 9486600), (9487203, 9493395)] 2021-10-25 09:35:14.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250817: ['FBtr0100850'] 2021-10-25 09:35:14.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250817 has a single transcript. 2021-10-25 09:35:14.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24663232, 24663290)] 2021-10-25 09:35:14.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12086762, 12086830)] 2021-10-25 09:35:14.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250819: ['FBtr0091470', 'FBtr0091472', 'FBtr0091473', 'FBtr0334661'] 2021-10-25 09:35:14.058 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1039215, 1039795), (1039233, 1039795), (1040220, 1040296), (1040223, 1040296), (1040354, 1099100)] 2021-10-25 09:35:14.059 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.059 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050169: ['FBtr0072302'] 2021-10-25 09:35:14.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050169 has a single transcript. 2021-10-25 09:35:14.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030375: ['FBtr0073635'] 2021-10-25 09:35:14.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030375 has a single transcript. 2021-10-25 09:35:14.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050172: ['FBtr0072193', 'FBtr0345934'] 2021-10-25 09:35:14.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030376: ['FBtr0300918', 'FBtr0333729'] 2021-10-25 09:35:14.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034069: ['FBtr0301196'] 2021-10-25 09:35:14.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034069 has a single transcript. 2021-10-25 09:35:14.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034070: ['FBtr0087209', 'FBtr0340019'] 2021-10-25 09:35:14.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24030843, 24030969)] 2021-10-25 09:35:14.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12107301, 12107360), (12107414, 12107480), (12107414, 12107483), (12107656, 12107777), (12108106, 12108169)] 2021-10-25 09:35:14.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.126 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1185834, 1186472), (1185966, 1186472), (1186219, 1186328), (1186634, 1187521), (1187572, 1187734), (1187614, 1187734), (1187880, 1188188), (1188349, 1189053), (1189689, 1189880), (1190008, 1190066), (1190008, 1190297), (1190549, 1192019), (1192162, 1192224), (1192306, 1192356)] 2021-10-25 09:35:14.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.152 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16032176, 16038051), (16032434, 16038051), (16038457, 16040142), (16040259, 16040891), (16041711, 16041918), (16042037, 16042104), (16042451, 16042508), (16042698, 16042754), (16042891, 16042952), (16043170, 16043245), (16043321, 16043381), (16043534, 16043598), (16045013, 16045078), (16045180, 16045286), (16045390, 16045450)] 2021-10-25 09:35:14.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.153 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030377: ['FBtr0073634'] 2021-10-25 09:35:14.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030377 has a single transcript. 2021-10-25 09:35:14.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050177: ['FBtr0072122'] 2021-10-25 09:35:14.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050177 has a single transcript. 2021-10-25 09:35:14.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030384: ['FBtr0073643'] 2021-10-25 09:35:14.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030384 has a single transcript. 2021-10-25 09:35:14.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050178: ['FBtr0072159'] 2021-10-25 09:35:14.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050178 has a single transcript. 2021-10-25 09:35:14.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030385: ['FBtr0336964'] 2021-10-25 09:35:14.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030385 has a single transcript. 2021-10-25 09:35:14.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037700: ['FBtr0082061'] 2021-10-25 09:35:14.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037700 has a single transcript. 2021-10-25 09:35:14.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050181: ['FBtr0072116'] 2021-10-25 09:35:14.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050181 has a single transcript. 2021-10-25 09:35:14.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030386: ['FBtr0073644'] 2021-10-25 09:35:14.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030386 has a single transcript. 2021-10-25 09:35:14.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004872: ['FBtr0080166', 'FBtr0340227'] 2021-10-25 09:35:14.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037702: ['FBtr0082065', 'FBtr0113207', 'FBtr0334650', 'FBtr0334651', 'FBtr0334652'] 2021-10-25 09:35:14.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030389: ['FBtr0073647', 'FBtr0346299'] 2021-10-25 09:35:14.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050183: ['FBtr0072099', 'FBtr0345467'] 2021-10-25 09:35:14.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034071: ['FBtr0087210', 'FBtr0340020'] 2021-10-25 09:35:14.250 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:14.250 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10983540, 10983665), (10983776, 10983895), (10984087, 10984140), (10984341, 10984945), (10985100, 10985166), (10985487, 10985543), (10986128, 10987248)] 2021-10-25 09:35:14.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.251 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.251 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23691523, 23691576), (23692440, 23692611), (23692800, 23692858), (23693731, 23695279), (23696265, 23696441), (23697141, 23697194), (23697608, 23697666)] 2021-10-25 09:35:14.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16047922, 16047983), (16048066, 16048131), (16048278, 16048336), (16048429, 16048492), (16048695, 16048753), (16048919, 16048983), (16049146, 16049203), (16049261, 16049325), (16049409, 16049486), (16049619, 16056525), (16056625, 16056925), (16057577, 16058454), (16059745, 16059817)] 2021-10-25 09:35:14.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250820: ['FBtr0084017', 'FBtr0113259'] 2021-10-25 09:35:14.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050184: ['FBtr0072065'] 2021-10-25 09:35:14.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050184 has a single transcript. 2021-10-25 09:35:14.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030390: ['FBtr0073670'] 2021-10-25 09:35:14.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030390 has a single transcript. 2021-10-25 09:35:14.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050185: ['FBtr0072060'] 2021-10-25 09:35:14.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050185 has a single transcript. 2021-10-25 09:35:14.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004875: ['FBtr0073152', 'FBtr0073153', 'FBtr0112844', 'FBtr0112845', 'FBtr0333208', 'FBtr0333209', 'FBtr0333210'] 2021-10-25 09:35:14.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030391: ['FBtr0073668', 'FBtr0073669', 'FBtr0339841'] 2021-10-25 09:35:14.322 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9516167, 9521052), (9517457, 9521052), (9517500, 9521052), (9521350, 9521415), (9521976, 9522039), (9522235, 9522294), (9522714, 9523535), (9522891, 9524201), (9522891, 9523535), (9523796, 9524201), (9524307, 9524381), (9524722, 9524780), (9524953, 9525019), (9525753, 9525808), (9526144, 9526213), (9526443, 9526505)] 2021-10-25 09:35:14.323 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050187: ['FBtr0304796', 'FBtr0301927'] 2021-10-25 09:35:14.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21138488, 21138554), (21139065, 21139117), (21139579, 21139689)] 2021-10-25 09:35:14.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034072: ['FBtr0087257', 'FBtr0087258', 'FBtr0087256', 'FBtr0306238'] 2021-10-25 09:35:14.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22917298, 22917350), (22917469, 22917533), (22917549, 22917633), (22917582, 22917633), (22918197, 22918259), (22918408, 22918465), (22918511, 22918567)] 2021-10-25 09:35:14.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12460583, 12460988), (12461211, 12461455), (12461649, 12461735), (12461679, 12461735), (12461872, 12462054), (12461872, 12462866)] 2021-10-25 09:35:14.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250821: ['FBtr0078981', 'FBtr0336708'] 2021-10-25 09:35:14.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050192: ['FBtr0071967'] 2021-10-25 09:35:14.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050192 has a single transcript. 2021-10-25 09:35:14.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050195: ['FBtr0071931'] 2021-10-25 09:35:14.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050195 has a single transcript. 2021-10-25 09:35:14.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050196: ['FBtr0071927'] 2021-10-25 09:35:14.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050196 has a single transcript. 2021-10-25 09:35:14.445 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16083393, 16083449), (16083611, 16083682), (16083883, 16083945), (16085096, 16085163), (16085489, 16085563), (16085620, 16086930), (16085620, 16088304), (16085620, 16086044), (16086293, 16086930), (16086293, 16088304), (16087725, 16088304), (16088365, 16088451), (16088535, 16088682), (16088825, 16088906), (16089038, 16089091), (16089286, 16089570), (16089892, 16098127)] 2021-10-25 09:35:14.447 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.447 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050197: ['FBtr0087494'] 2021-10-25 09:35:14.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050197 has a single transcript. 2021-10-25 09:35:14.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4252242, 4252297), (4252714, 4252814), (4252814, 4252875)] 2021-10-25 09:35:14.449 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4252297, 4252814, 'FBtr0078981_exon_2') contains intron (4252714, 4252814) 2021-10-25 09:35:14.450 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4252814, 4253043, 'FBtr0336708_exon_1') contains intron (4252814, 4252875) 2021-10-25 09:35:14.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078981_exon_2', 'FBtr0336708_exon_1'] 2021-10-25 09:35:14.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050198: ['FBtr0072445'] 2021-10-25 09:35:14.455 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050198 has a single transcript. 2021-10-25 09:35:14.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050199: ['FBtr0072446'] 2021-10-25 09:35:14.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050199 has a single transcript. 2021-10-25 09:35:14.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263112: ['FBtr0307326', 'FBtr0307327', 'FBtr0307328', 'FBtr0307329'] 2021-10-25 09:35:14.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050200: ['FBtr0072447'] 2021-10-25 09:35:14.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050200 has a single transcript. 2021-10-25 09:35:14.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050201: ['FBtr0071983'] 2021-10-25 09:35:14.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050201 has a single transcript. 2021-10-25 09:35:14.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050202: ['FBtr0071962'] 2021-10-25 09:35:14.488 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050202 has a single transcript. 2021-10-25 09:35:14.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3818920, 3831720), (3818920, 3829418), (3829295, 3829418), (3829861, 3831720), (3832543, 3832601), (3832543, 3832616), (3832758, 3832855), (3833009, 3833071), (3833398, 3833455), (3833670, 3834270), (3833670, 3836021), (3834627, 3836021), (3836934, 3836998), (3837605, 3837661), (3839361, 3839423), (3839523, 3839632), (3839523, 3839605)] 2021-10-25 09:35:14.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030394: ['FBtr0073650'] 2021-10-25 09:35:14.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030394 has a single transcript. 2021-10-25 09:35:14.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050203: ['FBtr0273303'] 2021-10-25 09:35:14.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050203 has a single transcript. 2021-10-25 09:35:14.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030395: ['FBtr0073667'] 2021-10-25 09:35:14.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030395 has a single transcript. 2021-10-25 09:35:14.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050206: ['FBtr0071631'] 2021-10-25 09:35:14.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050206 has a single transcript. 2021-10-25 09:35:14.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030396: ['FBtr0073652'] 2021-10-25 09:35:14.513 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030396 has a single transcript. 2021-10-25 09:35:14.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050208: ['FBtr0071574'] 2021-10-25 09:35:14.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050208 has a single transcript. 2021-10-25 09:35:14.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250822: ['FBtr0112415'] 2021-10-25 09:35:14.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250822 has a single transcript. 2021-10-25 09:35:14.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030398: ['FBtr0073653', 'FBtr0333157'] 2021-10-25 09:35:14.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037703: ['FBtr0082063', 'FBtr0345178'] 2021-10-25 09:35:14.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250823: ['FBtr0301304', 'FBtr0083262', 'FBtr0083263', 'FBtr0083261', 'FBtr0083265', 'FBtr0083264', 'FBtr0100331', 'FBtr0100332', 'FBtr0100333', 'FBtr0330041', 'FBtr0305071', 'FBtr0305072', 'FBtr0334606'] 2021-10-25 09:35:14.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1199175, 1219693), (1219595, 1219693), (1220024, 1220075), (1220195, 1220259), (1220195, 1220316), (1220688, 1221490), (1220688, 1221261), (1221282, 1221490), (1221650, 1221707), (1221949, 1222005), (1222164, 1222221)] 2021-10-25 09:35:14.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12553510, 12553621), (12553831, 12554014), (12553831, 12554020)] 2021-10-25 09:35:14.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9516167, 9518260), (9517457, 9518260)] 2021-10-25 09:35:14.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034073: ['FBtr0087255'] 2021-10-25 09:35:14.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034073 has a single transcript. 2021-10-25 09:35:14.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034075: ['FBtr0087219', 'FBtr0087220', 'FBtr0300575', 'FBtr0310447', 'FBtr0305090', 'FBtr0305091', 'FBtr0305092', 'FBtr0336734'] 2021-10-25 09:35:14.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030400: ['FBtr0073662', 'FBtr0273245', 'FBtr0331718'] 2021-10-25 09:35:14.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037705: ['FBtr0082116', 'FBtr0082117', 'FBtr0082118'] 2021-10-25 09:35:14.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050209: ['FBtr0071626'] 2021-10-25 09:35:14.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050209 has a single transcript. 2021-10-25 09:35:14.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050211: ['FBtr0086247'] 2021-10-25 09:35:14.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050211 has a single transcript. 2021-10-25 09:35:14.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12572626, 12572771), (12573409, 12573724), (12573409, 12581571), (12573814, 12581571), (12573859, 12581571)] 2021-10-25 09:35:14.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050212: ['FBtr0086326'] 2021-10-25 09:35:14.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050212 has a single transcript. 2021-10-25 09:35:14.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263113: ['FBtr0307337'] 2021-10-25 09:35:14.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263113 has a single transcript. 2021-10-25 09:35:14.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050215: ['FBtr0086330'] 2021-10-25 09:35:14.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050215 has a single transcript. 2021-10-25 09:35:14.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9539290, 9539362), (9539475, 9539818), (9540003, 9540067), (9540527, 9540583), (9541166, 9541228), (9541579, 9541678), (9542009, 9546797), (9542924, 9546797), (9547370, 9549777), (9547370, 9551315), (9547370, 9551765), (9549810, 9551765)] 2021-10-25 09:35:14.715 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.717 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263114: ['FBtr0307338'] 2021-10-25 09:35:14.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263114 has a single transcript. 2021-10-25 09:35:14.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050218: ['FBtr0086331'] 2021-10-25 09:35:14.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050218 has a single transcript. 2021-10-25 09:35:14.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263116: ['FBtr0086599', 'FBtr0330055', 'FBtr0330056'] 2021-10-25 09:35:14.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050220: ['FBtr0086332'] 2021-10-25 09:35:14.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050220 has a single transcript. 2021-10-25 09:35:14.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050222: ['FBtr0300457', 'FBtr0300458', 'FBtr0342898'] 2021-10-25 09:35:14.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19023683, 19023861), (19024380, 19024809), (19024380, 19024644), (19024989, 19025877), (19026015, 19026332), (19026522, 19026607), (19026717, 19027173), (19027307, 19028617), (19029245, 19032039)] 2021-10-25 09:35:14.793 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.793 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004876: ['FBtr0083716', 'FBtr0305321'] 2021-10-25 09:35:14.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030403: ['FBtr0073658'] 2021-10-25 09:35:14.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030403 has a single transcript. 2021-10-25 09:35:14.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21583611, 21583678), (21583615, 21583678), (21583738, 21583795), (21584201, 21584257), (21584326, 21584386), (21584750, 21584803)] 2021-10-25 09:35:14.800 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21584257, 21584750, 'FBtr0300458_exon_4') contains intron (21584326, 21584386) 2021-10-25 09:35:14.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300458_exon_4'] 2021-10-25 09:35:14.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.807 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030406: ['FBtr0073657', 'FBtr0346381', 'FBtr0310434'] 2021-10-25 09:35:14.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037707: ['FBtr0082066'] 2021-10-25 09:35:14.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037707 has a single transcript. 2021-10-25 09:35:14.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16110671, 16111740), (16110671, 16111500), (16111554, 16111740), (16111926, 16111982), (16112141, 16112195), (16112141, 16112201), (16112530, 16112588), (16112530, 16112591), (16112714, 16112788), (16112969, 16113180), (16112969, 16114771), (16113258, 16113775), (16113883, 16114034), (16114472, 16114771), (16114633, 16114771), (16114866, 16114939), (16114866, 16115353), (16115594, 16115652), (16115758, 16115810), (16115762, 16115810), (16116536, 16116592)] 2021-10-25 09:35:14.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19047448, 19047676), (19047448, 19047987), (19047725, 19047987), (19049756, 19049816), (19050069, 19050145), (19050072, 19050145), (19050231, 19050290), (19050489, 19060712), (19060834, 19087404), (19088300, 19093688)] 2021-10-25 09:35:14.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037708: ['FBtr0082115'] 2021-10-25 09:35:14.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037708 has a single transcript. 2021-10-25 09:35:14.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037709: ['FBtr0082067'] 2021-10-25 09:35:14.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037709 has a single transcript. 2021-10-25 09:35:14.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037710: ['FBtr0082113', 'FBtr0332808'] 2021-10-25 09:35:14.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12610634, 12610688), (12611470, 12611522)] 2021-10-25 09:35:14.875 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.876 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.879 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16272499, 16274151), (16273112, 16274584), (16273330, 16274151), (16274875, 16274953), (16274881, 16274953), (16275169, 16289630), (16281011, 16282080), (16281024, 16282080), (16282408, 16289630), (16289373, 16289630), (16289839, 16292723), (16289839, 16292475), (16292541, 16292723), (16292550, 16292723), (16292834, 16295668), (16292834, 16293986), (16294153, 16296661), (16295820, 16296661), (16296776, 16296835), (16297104, 16297174), (16297345, 16298469), (16297345, 16297456), (16298550, 16299590), (16298550, 16298830), (16298896, 16299590), (16299689, 16301244), (16301351, 16301804), (16301351, 16301822)] 2021-10-25 09:35:14.880 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0301304_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.880 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0083262_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.881 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0083261_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.881 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0083265_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.882 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0330041_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.882 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0305071_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.883 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0305072_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.883 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16274151, 16275169, 'FBtr0334606_exon_2') contains intron (16274875, 16274953) 2021-10-25 09:35:14.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301304_exon_2', 'FBtr0083262_exon_2', 'FBtr0083261_exon_2', 'FBtr0083265_exon_2', 'FBtr0330041_exon_2', 'FBtr0305071_exon_2', 'FBtr0305072_exon_2', 'FBtr0334606_exon_2'] 2021-10-25 09:35:14.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004878: ['FBtr0078725', 'FBtr0339518'] 2021-10-25 09:35:14.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9562001, 9562174), (9562111, 9562174), (9562570, 9562816), (9563095, 9563189), (9563336, 9563435)] 2021-10-25 09:35:14.902 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:14.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050223: ['FBtr0086498'] 2021-10-25 09:35:14.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050223 has a single transcript. 2021-10-25 09:35:14.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263117: ['FBtr0112610', 'FBtr0330388', 'FBtr0347067', 'FBtr0307884', 'FBtr0345325'] 2021-10-25 09:35:14.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050225: ['FBtr0086527'] 2021-10-25 09:35:14.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050225 has a single transcript. 2021-10-25 09:35:14.922 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083261': ['FBtr0330041']} 2021-10-25 09:35:14.922 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330041']] 2021-10-25 09:35:14.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050227: ['FBtr0086603'] 2021-10-25 09:35:14.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050227 has a single transcript. 2021-10-25 09:35:14.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050229: ['FBtr0086611'] 2021-10-25 09:35:14.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050229 has a single transcript. 2021-10-25 09:35:14.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050231: ['FBtr0086835'] 2021-10-25 09:35:14.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050231 has a single transcript. 2021-10-25 09:35:14.950 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5713952, 5714023), (5714457, 5714527), (5715221, 5715760), (5716017, 5716323)] 2021-10-25 09:35:14.951 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5715760, 5716805, 'FBtr0078725_exon_1') contains intron (5716017, 5716323) 2021-10-25 09:35:14.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078725_exon_1'] 2021-10-25 09:35:14.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:14.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050232: ['FBtr0086965'] 2021-10-25 09:35:14.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050232 has a single transcript. 2021-10-25 09:35:14.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037712: ['FBtr0082071', 'FBtr0332806'] 2021-10-25 09:35:14.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050234: ['FBtr0087001'] 2021-10-25 09:35:14.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050234 has a single transcript. 2021-10-25 09:35:14.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030407: ['FBtr0073655', 'FBtr0346308'] 2021-10-25 09:35:14.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050235: ['FBtr0086988'] 2021-10-25 09:35:14.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050235 has a single transcript. 2021-10-25 09:35:14.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050237: ['FBtr0087198'] 2021-10-25 09:35:14.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050237 has a single transcript. 2021-10-25 09:35:15.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050238: ['FBtr0087197'] 2021-10-25 09:35:15.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050238 has a single transcript. 2021-10-25 09:35:15.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004880: ['FBtr0073165', 'FBtr0333136'] 2021-10-25 09:35:15.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050239: ['FBtr0087128'] 2021-10-25 09:35:15.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050239 has a single transcript. 2021-10-25 09:35:15.013 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9566463, 9566555), (9567556, 9567610), (9568519, 9568581), (9568752, 9568805), (9568954, 9569010)] 2021-10-25 09:35:15.014 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9568805, 9569189, 'FBtr0082071_exon_5') contains intron (9568954, 9569010) 2021-10-25 09:35:15.015 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082071_exon_5'] 2021-10-25 09:35:15.015 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12611990, 12612394), (12612772, 12613109), (12613286, 12614020), (12614850, 12614916)] 2021-10-25 09:35:15.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050240: ['FBtr0087129'] 2021-10-25 09:35:15.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050240 has a single transcript. 2021-10-25 09:35:15.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050241: ['FBtr0087425'] 2021-10-25 09:35:15.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050241 has a single transcript. 2021-10-25 09:35:15.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22312077, 22312138), (22312216, 22314659), (22314766, 22314994), (22315172, 22315544), (22315799, 22318345), (22318989, 22323138), (22318989, 22323724), (22323364, 22323724), (22323379, 22323724)] 2021-10-25 09:35:15.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050249: ['FBtr0087963'] 2021-10-25 09:35:15.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050249 has a single transcript. 2021-10-25 09:35:15.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3985490, 3986523)] 2021-10-25 09:35:15.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050250: ['FBtr0087962'] 2021-10-25 09:35:15.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050250 has a single transcript. 2021-10-25 09:35:15.058 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0112610': ['FBtr0330388', 'FBtr0347067']} 2021-10-25 09:35:15.059 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330388', 'FBtr0347067']] 2021-10-25 09:35:15.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050251: ['FBtr0087961'] 2021-10-25 09:35:15.064 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050251 has a single transcript. 2021-10-25 09:35:15.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050254: ['FBtr0088087'] 2021-10-25 09:35:15.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050254 has a single transcript. 2021-10-25 09:35:15.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037713: ['FBtr0082112', 'FBtr0332807'] 2021-10-25 09:35:15.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050257: ['FBtr0088131'] 2021-10-25 09:35:15.087 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050257 has a single transcript. 2021-10-25 09:35:15.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030408: ['FBtr0073656'] 2021-10-25 09:35:15.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030408 has a single transcript. 2021-10-25 09:35:15.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050259: ['FBtr0071921'] 2021-10-25 09:35:15.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050259 has a single transcript. 2021-10-25 09:35:15.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030409: ['FBtr0073674', 'FBtr0307897'] 2021-10-25 09:35:15.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050263: ['FBtr0273308', 'FBtr0347184', 'FBtr0347185'] 2021-10-25 09:35:15.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004882: ['FBtr0084384', 'FBtr0084386', 'FBtr0084385', 'FBtr0100227', 'FBtr0100228', 'FBtr0301491', 'FBtr0334498'] 2021-10-25 09:35:15.126 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9569587, 9569648), (9569970, 9570042), (9569990, 9570042)] 2021-10-25 09:35:15.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.148 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12624431, 12627215), (12627144, 12627215), (12627364, 12627420), (12627612, 12627676)] 2021-10-25 09:35:15.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263118: ['FBtr0085009', 'FBtr0339598'] 2021-10-25 09:35:15.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21675302, 21676329), (21677326, 21677388), (21677856, 21677924), (21680515, 21680575), (21681131, 21683380), (21682460, 21683380), (21684025, 21684084), (21684190, 21684252), (21684379, 21684441), (21684636, 21684700)] 2021-10-25 09:35:15.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034076: ['FBtr0087222'] 2021-10-25 09:35:15.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034076 has a single transcript. 2021-10-25 09:35:15.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037714: ['FBtr0082111'] 2021-10-25 09:35:15.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037714 has a single transcript. 2021-10-25 09:35:15.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034081: ['FBtr0345647', 'FBtr0344527'] 2021-10-25 09:35:15.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037715: ['FBtr0082109', 'FBtr0082110', 'FBtr0334656', 'FBtr0334657'] 2021-10-25 09:35:15.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26441736, 26447539)] 2021-10-25 09:35:15.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030410: ['FBtr0073709', 'FBtr0346122'] 2021-10-25 09:35:15.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:15.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12629410, 12629474)] 2021-10-25 09:35:15.273 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9572754, 9573248), (9573289, 9573353), (9573506, 9574141), (9573595, 9573793), (9573595, 9573802)] 2021-10-25 09:35:15.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23266225, 23266279), (23266665, 23266720), (23266901, 23266961), (23267680, 23268062), (23267680, 23267820), (23268294, 23268383), (23268520, 23269121), (23269603, 23270463), (23269603, 23269750), (23269800, 23269990), (23270683, 23279058), (23279558, 23280430)] 2021-10-25 09:35:15.287 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23269750, 23270285, 'FBtr0084385_exon_1') contains intron (23269800, 23269990) 2021-10-25 09:35:15.287 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23269750, 23270285, 'FBtr0100227_exon_1') contains intron (23269800, 23269990) 2021-10-25 09:35:15.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084385_exon_1', 'FBtr0100227_exon_1'] 2021-10-25 09:35:15.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034082: ['FBtr0087250'] 2021-10-25 09:35:15.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034082 has a single transcript. 2021-10-25 09:35:15.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263120: ['FBtr0100427', 'FBtr0100429', 'FBtr0088699', 'FBtr0100431', 'FBtr0100428', 'FBtr0100426', 'FBtr0100430', 'FBtr0088701', 'FBtr0088700', 'FBtr0333001'] 2021-10-25 09:35:15.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050265: ['FBtr0071891', 'FBtr0343180'] 2021-10-25 09:35:15.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034083: ['FBtr0302084'] 2021-10-25 09:35:15.300 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034083 has a single transcript. 2021-10-25 09:35:15.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034084: ['FBtr0087249'] 2021-10-25 09:35:15.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034084 has a single transcript. 2021-10-25 09:35:15.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034085: ['FBtr0289985'] 2021-10-25 09:35:15.317 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034085 has a single transcript. 2021-10-25 09:35:15.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034086: ['FBtr0087247', 'FBtr0304748'] 2021-10-25 09:35:15.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030411: ['FBtr0073675'] 2021-10-25 09:35:15.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030411 has a single transcript. 2021-10-25 09:35:15.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22832683, 22832921), (22833058, 22833119), (22834193, 22834248)] 2021-10-25 09:35:15.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030412: ['FBtr0073678', 'FBtr0340406', 'FBtr0340407', 'FBtr0300375', 'FBtr0307898', 'FBtr0307899', 'FBtr0307900'] 2021-10-25 09:35:15.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16185751, 16185811), (16186019, 16186406)] 2021-10-25 09:35:15.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050267: ['FBtr0309275'] 2021-10-25 09:35:15.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050267 has a single transcript. 2021-10-25 09:35:15.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050268: ['FBtr0273311'] 2021-10-25 09:35:15.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050268 has a single transcript. 2021-10-25 09:35:15.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050269: ['FBtr0071867', 'FBtr0346949'] 2021-10-25 09:35:15.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034087: ['FBtr0087242', 'FBtr0333169'] 2021-10-25 09:35:15.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037716: ['FBtr0082072', 'FBtr0334655'] 2021-10-25 09:35:15.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250824: ['FBtr0300632', 'FBtr0342887'] 2021-10-25 09:35:15.467 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22667326, 22667382), (22667518, 22667589), (22668315, 22668648)] 2021-10-25 09:35:15.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.479 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16187136, 16188577), (16188154, 16188577), (16189664, 16189762), (16192031, 16192099), (16192225, 16192287), (16192503, 16192564), (16192776, 16192844)] 2021-10-25 09:35:15.480 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.480 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.480 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9580096, 9580155)] 2021-10-25 09:35:15.481 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.481 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21319803, 21319864), (21319803, 21319860)] 2021-10-25 09:35:15.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12631813, 12633912), (12631813, 12633917), (12631813, 12635731), (12633957, 12635731), (12636283, 12636538), (12636636, 12636710), (12636899, 12637050), (12637185, 12637260), (12637324, 12637437), (12637645, 12637706), (12637782, 12638018), (12638173, 12638343), (12638525, 12638592), (12639075, 12639153), (12639296, 12640661), (12640839, 12643872), (12640839, 12648536), (12644767, 12651109), (12648783, 12651109), (12649182, 12651109), (12651226, 12651294), (12651417, 12651478), (12651598, 12651674), (12652124, 12652240), (12652349, 12652414), (12652501, 12652568), (12652664, 12652738), (12652863, 12652946)] 2021-10-25 09:35:15.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050271: ['FBtr0339758', 'FBtr0346668', 'FBtr0346669', 'FBtr0346670'] 2021-10-25 09:35:15.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8665870, 8666767), (8666311, 8674646), (8666311, 8666767), (8666311, 8676471), (8666794, 8674646), (8670820, 8676471), (8672278, 8676471), (8672406, 8674646), (8674871, 8676471), (8675708, 8676471), (8676334, 8676471), (8676607, 8677965), (8676607, 8678429), (8678028, 8678429), (8678868, 8678927), (8679134, 8680011), (8680486, 8680548), (8680721, 8680784), (8681048, 8681109), (8681385, 8681450)] 2021-10-25 09:35:15.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037717: ['FBtr0082073'] 2021-10-25 09:35:15.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037717 has a single transcript. 2021-10-25 09:35:15.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037718: ['FBtr0082074'] 2021-10-25 09:35:15.544 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037718 has a single transcript. 2021-10-25 09:35:15.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034091: ['FBtr0087193', 'FBtr0087194', 'FBtr0087195', 'FBtr0087196', 'FBtr0113084', 'FBtr0332855', 'FBtr0306652', 'FBtr0306653'] 2021-10-25 09:35:15.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037719: ['FBtr0082105', 'FBtr0100537'] 2021-10-25 09:35:15.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250825: ['FBtr0112435'] 2021-10-25 09:35:15.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250825 has a single transcript. 2021-10-25 09:35:15.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004885: ['FBtr0084689', 'FBtr0084690', 'FBtr0339252'] 2021-10-25 09:35:15.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250826: ['FBtr0112351'] 2021-10-25 09:35:15.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250826 has a single transcript. 2021-10-25 09:35:15.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250827: ['FBtr0112411'] 2021-10-25 09:35:15.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250827 has a single transcript. 2021-10-25 09:35:15.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250830: ['FBtr0111273', 'FBtr0329829', 'FBtr0345222'] 2021-10-25 09:35:15.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9589782, 9589882)] 2021-10-25 09:35:15.596 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9589467, 9591002, 'FBtr0100537_exon_1') contains intron (9589782, 9589882) 2021-10-25 09:35:15.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100537_exon_1'] 2021-10-25 09:35:15.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22816564, 22817516), (22817703, 22818907), (22818777, 22818907), (22818967, 22819422), (22819583, 22819641), (22819953, 22820158), (22820329, 22820386), (22820478, 22820668), (22820478, 22821148), (22820816, 22821148)] 2021-10-25 09:35:15.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24719739, 24727705), (24720216, 24727705), (24720220, 24727705), (24728326, 24742610), (24742957, 24743162), (24743584, 24744007), (24744295, 24744787), (24745027, 24745092), (24745651, 24745760), (24745959, 24746037), (24746302, 24746393), (24746599, 24746829), (24747473, 24747591), (24747772, 24747834), (24748097, 24748156)] 2021-10-25 09:35:15.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037720: ['FBtr0082075', 'FBtr0082076', 'FBtr0334616', 'FBtr0334617'] 2021-10-25 09:35:15.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4787075, 4787137), (4788345, 4788399), (4788534, 4788760)] 2021-10-25 09:35:15.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16204381, 16204441), (16204754, 16204824), (16205031, 16205319), (16205031, 16205709), (16205580, 16205709), (16205819, 16205900), (16206079, 16206171), (16206079, 16210189), (16206079, 16221122), (16206079, 16210021), (16206079, 16221669), (16206079, 16209567), (16206227, 16210189), (16221149, 16221669)] 2021-10-25 09:35:15.753 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16204824, 16205580, 'FBtr0306652_exon_4') contains intron (16205031, 16205319) 2021-10-25 09:35:15.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306652_exon_4'] 2021-10-25 09:35:15.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9592185, 9621518), (9592185, 9607912), (9607974, 9621518), (9622417, 9622469), (9622417, 9622472), (9622774, 9623117), (9623062, 9623117)] 2021-10-25 09:35:15.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004888: ['FBtr0073151', 'FBtr0303096'] 2021-10-25 09:35:15.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050272: ['FBtr0071890'] 2021-10-25 09:35:15.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050272 has a single transcript. 2021-10-25 09:35:15.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050273: ['FBtr0346948'] 2021-10-25 09:35:15.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050273 has a single transcript. 2021-10-25 09:35:15.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250831: ['FBtr0110770'] 2021-10-25 09:35:15.784 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250831 has a single transcript. 2021-10-25 09:35:15.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250832: ['FBtr0305053', 'FBtr0089608'] 2021-10-25 09:35:15.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050274: ['FBtr0071888'] 2021-10-25 09:35:15.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050274 has a single transcript. 2021-10-25 09:35:15.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050275: ['FBtr0344659', 'FBtr0344660', 'FBtr0344661'] 2021-10-25 09:35:15.814 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3814355, 3816631), (3817080, 3817436), (3817721, 3817783)] 2021-10-25 09:35:15.815 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030417: ['FBtr0073685'] 2021-10-25 09:35:15.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030417 has a single transcript. 2021-10-25 09:35:15.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030418: ['FBtr0073686', 'FBtr0073687', 'FBtr0340411', 'FBtr0346128', 'FBtr0333722'] 2021-10-25 09:35:15.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29715190, 29715243)] 2021-10-25 09:35:15.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29715067, 29715377, 'FBtr0305053_exon_1') contains intron (29715190, 29715243) 2021-10-25 09:35:15.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305053_exon_1'] 2021-10-25 09:35:15.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22708092, 22708151), (22708427, 22708682), (22708466, 22708682), (22708976, 22709030), (22709131, 22709197), (22709138, 22709197), (22709325, 22709378), (22709659, 22709714), (22710272, 22710322), (22710606, 22710699), (22710936, 22710994), (22711569, 22711619), (22711783, 22711845), (22712094, 22712149), (22712359, 22712416)] 2021-10-25 09:35:15.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004889: ['FBtr0082186', 'FBtr0082187', 'FBtr0082188', 'FBtr0082189', 'FBtr0082190', 'FBtr0082191', 'FBtr0082192', 'FBtr0082193', 'FBtr0345177'] 2021-10-25 09:35:15.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250833: ['FBtr0112767', 'FBtr0333056'] 2021-10-25 09:35:15.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037721: ['FBtr0082104', 'FBtr0334619'] 2021-10-25 09:35:15.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12744949, 12746868), (12745867, 12746868), (12746719, 12746868)] 2021-10-25 09:35:15.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263121: ['FBtr0088896', 'FBtr0088895'] 2021-10-25 09:35:15.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9625332, 9625426), (9625564, 9625668), (9625959, 9626234), (9625959, 9626816)] 2021-10-25 09:35:15.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8326028, 8326147), (8326379, 8326836)] 2021-10-25 09:35:15.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:15.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050277: ['FBtr0071779'] 2021-10-25 09:35:15.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050277 has a single transcript. 2021-10-25 09:35:15.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050278: ['FBtr0071780', 'FBtr0345468', 'FBtr0345469'] 2021-10-25 09:35:15.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7827882, 7828170), (7828347, 7828409), (7828509, 7828633), (7828509, 7828566)] 2021-10-25 09:35:15.996 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:15.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250834: ['FBtr0080673'] 2021-10-25 09:35:16.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250834 has a single transcript. 2021-10-25 09:35:16.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037722: ['FBtr0082077'] 2021-10-25 09:35:16.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037722 has a single transcript. 2021-10-25 09:35:16.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250835: ['FBtr0335171', 'FBtr0335172'] 2021-10-25 09:35:16.024 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037723: ['FBtr0082078', 'FBtr0082079', 'FBtr0306007'] 2021-10-25 09:35:16.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22217988, 22218040)] 2021-10-25 09:35:16.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263130: ['FBtr0307362'] 2021-10-25 09:35:16.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263130 has a single transcript. 2021-10-25 09:35:16.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2592009, 2592070), (2592229, 2592288)] 2021-10-25 09:35:16.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263131: ['FBtr0307367', 'FBtr0307368'] 2021-10-25 09:35:16.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10128515, 10128629), (10129433, 10129494), (10129646, 10134818), (10129646, 10133214), (10133587, 10134441), (10133587, 10134379), (10133587, 10134064), (10133587, 10134304), (10133587, 10133957), (10133587, 10134436), (10135064, 10139326), (10135064, 10135256)] 2021-10-25 09:35:16.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9631854, 9632106), (9631854, 9632376), (9632300, 9632376)] 2021-10-25 09:35:16.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10134818, 10135331, 'FBtr0345177_exon_1') contains intron (10135064, 10135256) 2021-10-25 09:35:16.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345177_exon_1'] 2021-10-25 09:35:16.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034092: ['FBtr0087192'] 2021-10-25 09:35:16.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034092 has a single transcript. 2021-10-25 09:35:16.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034093: ['FBtr0087191', 'FBtr0340024', 'FBtr0344079', 'FBtr0344080', 'FBtr0344081'] 2021-10-25 09:35:16.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030420: ['FBtr0073704', 'FBtr0346120'] 2021-10-25 09:35:16.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16492103, 16492170), (16492499, 16492661), (16493000, 16504321), (16503529, 16504321), (16504446, 16504759), (16504941, 16505060), (16505230, 16506376), (16506486, 16507333), (16507467, 16507904), (16507845, 16507904), (16508065, 16508464), (16508614, 16509828), (16509942, 16510017), (16510108, 16510336), (16510434, 16510650), (16510810, 16510871), (16510966, 16511030), (16511175, 16512964), (16513123, 16513333), (16513480, 16514356), (16514449, 16515856), (16515978, 16516651), (16516801, 16517479), (16517660, 16518025), (16518146, 16518210), (16518596, 16520068), (16520541, 16520877), (16521032, 16522798), (16522910, 16529626), (16529914, 16530429), (16530656, 16539145), (16539191, 16543164), (16539340, 16543164)] 2021-10-25 09:35:16.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250836: ['FBtr0301218', 'FBtr0076914'] 2021-10-25 09:35:16.154 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:16.155 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.155 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050280: ['FBtr0300928', 'FBtr0300929'] 2021-10-25 09:35:16.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7130901, 7130971), (7131010, 7131143)] 2021-10-25 09:35:16.178 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037724: ['FBtr0082101'] 2021-10-25 09:35:16.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037724 has a single transcript. 2021-10-25 09:35:16.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22113665, 22113730), (22113792, 22113843), (22114419, 22114481)] 2021-10-25 09:35:16.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263132: ['FBtr0307369', 'FBtr0307370', 'FBtr0307371', 'FBtr0307372', 'FBtr0307373', 'FBtr0307374', 'FBtr0307375'] 2021-10-25 09:35:16.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037726: ['FBtr0309027', 'FBtr0309028', 'FBtr0309029', 'FBtr0344344'] 2021-10-25 09:35:16.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030421: ['FBtr0073688', 'FBtr0073689', 'FBtr0333176'] 2021-10-25 09:35:16.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16224709, 16224769), (16224915, 16225106), (16225325, 16226656), (16225325, 16226058), (16225325, 16226567), (16225325, 16230077), (16226774, 16230077), (16226804, 16230077)] 2021-10-25 09:35:16.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250837: ['FBtr0331195', 'FBtr0331196', 'FBtr0080156', 'FBtr0080157'] 2021-10-25 09:35:16.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050281: ['FBtr0071760'] 2021-10-25 09:35:16.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050281 has a single transcript. 2021-10-25 09:35:16.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050284: ['FBtr0071684', 'FBtr0071685'] 2021-10-25 09:35:16.284 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12765512, 12766968), (12765603, 12766968), (12766678, 12766968), (12767354, 12769690), (12769824, 12769914)] 2021-10-25 09:35:16.285 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9651823, 9651899), (9652032, 9652389), (9652446, 9652503), (9652599, 9653620), (9653777, 9653842), (9654032, 9654327), (9654820, 9654896), (9655189, 9655252), (9655350, 9655477), (9655532, 9655598), (9657336, 9657404), (9657653, 9657944), (9659324, 9659496), (9660794, 9661461), (9660794, 9661265), (9661337, 9661461), (9661695, 9661769), (9662355, 9662411), (9662798, 9664349), (9664560, 9664618), (9664774, 9665809), (9665982, 9666077), (9667949, 9668010), (9668210, 9669032), (9669477, 9669540), (9669837, 9670089), (9670292, 9670351), (9670485, 9670697), (9670752, 9670840), (9670997, 9671051), (9671171, 9671232), (9672101, 9672160), (9672371, 9672435), (9673180, 9673239), (9673390, 9673443), (9673603, 9673658), (9673796, 9674535)] 2021-10-25 09:35:16.293 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9669032, 9669837, 'FBtr0309027_exon_12') contains intron (9669477, 9669540) 2021-10-25 09:35:16.293 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9669032, 9669837, 'FBtr0309028_exon_12') contains intron (9669477, 9669540) 2021-10-25 09:35:16.295 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309027_exon_12', 'FBtr0309028_exon_12'] 2021-10-25 09:35:16.296 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21651424, 21651508)] 2021-10-25 09:35:16.316 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21650819, 21651999, 'FBtr0071684_exon_1') contains intron (21651424, 21651508) 2021-10-25 09:35:16.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071684_exon_1'] 2021-10-25 09:35:16.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11011379, 11011453), (11011379, 11011471), (11011418, 11011471)] 2021-10-25 09:35:16.337 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11011311, 11012135, 'FBtr0080157_exon_1') contains intron (11011379, 11011453) 2021-10-25 09:35:16.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080157_exon_1'] 2021-10-25 09:35:16.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10016903, 10017540), (10016903, 10017617), (10017732, 10030266), (10030330, 10030406), (10030592, 10030730), (10031245, 10031311), (10031497, 10031562), (10031828, 10031888), (10032359, 10032419), (10033376, 10033437), (10033552, 10048004), (10033552, 10040691), (10034191, 10048004), (10034599, 10040691), (10038138, 10038251), (10038703, 10038847), (10040817, 10048004), (10043541, 10048004), (10048497, 10049513), (10049831, 10049891)] 2021-10-25 09:35:16.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030425: ['FBtr0073690', 'FBtr0305591'] 2021-10-25 09:35:16.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050285: ['FBtr0071678'] 2021-10-25 09:35:16.379 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050285 has a single transcript. 2021-10-25 09:35:16.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050286: ['FBtr0300951', 'FBtr0300952'] 2021-10-25 09:35:16.421 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:16.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21536181, 21536244), (21536423, 21536481), (21536527, 21536582)] 2021-10-25 09:35:16.436 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21535715, 21536423, 'FBtr0300952_exon_3') contains intron (21536181, 21536244) 2021-10-25 09:35:16.436 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300952_exon_3'] 2021-10-25 09:35:16.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034094: ['FBtr0087130'] 2021-10-25 09:35:16.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034094 has a single transcript. 2021-10-25 09:35:16.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034095: ['FBtr0087131'] 2021-10-25 09:35:16.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034095 has a single transcript. 2021-10-25 09:35:16.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004892: ['FBtr0077558'] 2021-10-25 09:35:16.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004892 has a single transcript. 2021-10-25 09:35:16.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034096: ['FBtr0087190'] 2021-10-25 09:35:16.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034096 has a single transcript. 2021-10-25 09:35:16.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034097: ['FBtr0087132'] 2021-10-25 09:35:16.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034097 has a single transcript. 2021-10-25 09:35:16.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004893: ['FBtr0077490', 'FBtr0077491', 'FBtr0077492', 'FBtr0077493', 'FBtr0307027', 'FBtr0307028', 'FBtr0307029'] 2021-10-25 09:35:16.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034098: ['FBtr0087189'] 2021-10-25 09:35:16.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034098 has a single transcript. 2021-10-25 09:35:16.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030429: ['FBtr0073699'] 2021-10-25 09:35:16.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030429 has a single transcript. 2021-10-25 09:35:16.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037727: ['FBtr0082081'] 2021-10-25 09:35:16.477 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037727 has a single transcript. 2021-10-25 09:35:16.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034099: ['FBtr0087188'] 2021-10-25 09:35:16.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034099 has a single transcript. 2021-10-25 09:35:16.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034103: ['FBtr0087136'] 2021-10-25 09:35:16.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034103 has a single transcript. 2021-10-25 09:35:16.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030431: ['FBtr0073695', 'FBtr0073696'] 2021-10-25 09:35:16.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037728: ['FBtr0082082', 'FBtr0308353'] 2021-10-25 09:35:16.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050287: ['FBtr0071695'] 2021-10-25 09:35:16.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050287 has a single transcript. 2021-10-25 09:35:16.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034104: ['FBtr0087137'] 2021-10-25 09:35:16.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034104 has a single transcript. 2021-10-25 09:35:16.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034105: ['FBtr0087182'] 2021-10-25 09:35:16.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034105 has a single transcript. 2021-10-25 09:35:16.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050288: ['FBtr0113367'] 2021-10-25 09:35:16.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050288 has a single transcript. 2021-10-25 09:35:16.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250838: ['FBtr0072030', 'FBtr0072031'] 2021-10-25 09:35:16.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034106: ['FBtr0087138'] 2021-10-25 09:35:16.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034106 has a single transcript. 2021-10-25 09:35:16.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050289: ['FBtr0071697'] 2021-10-25 09:35:16.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050289 has a single transcript. 2021-10-25 09:35:16.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034109: ['FBtr0087179'] 2021-10-25 09:35:16.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034109 has a single transcript. 2021-10-25 09:35:16.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050290: ['FBtr0071672', 'FBtr0342959'] 2021-10-25 09:35:16.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034110: ['FBtr0087141', 'FBtr0329958'] 2021-10-25 09:35:16.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12901851, 12902315), (12902966, 12903328), (12902966, 12903077)] 2021-10-25 09:35:16.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9678086, 9678561), (9678648, 9678719), (9678976, 9679042)] 2021-10-25 09:35:16.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23386045, 23386116), (23386317, 23386396)] 2021-10-25 09:35:16.563 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23386116, 23386463, 'FBtr0072031_exon_1') contains intron (23386317, 23386396) 2021-10-25 09:35:16.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072031_exon_1'] 2021-10-25 09:35:16.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21691436, 21691668), (21692170, 21692234), (21692374, 21692431)] 2021-10-25 09:35:16.572 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.572 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:16.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.586 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087141': ['FBtr0329958']} 2021-10-25 09:35:16.586 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329958']] 2021-10-25 09:35:16.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030432: ['FBtr0073694'] 2021-10-25 09:35:16.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030432 has a single transcript. 2021-10-25 09:35:16.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034113: ['FBtr0087178'] 2021-10-25 09:35:16.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034113 has a single transcript. 2021-10-25 09:35:16.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030433: ['FBtr0073691', 'FBtr0343185'] 2021-10-25 09:35:16.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037730: ['FBtr0082099', 'FBtr0333194'] 2021-10-25 09:35:16.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034114: ['FBtr0087144'] 2021-10-25 09:35:16.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034114 has a single transcript. 2021-10-25 09:35:16.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034117: ['FBtr0087171', 'FBtr0087172'] 2021-10-25 09:35:16.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050291: ['FBtr0071549'] 2021-10-25 09:35:16.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050291 has a single transcript. 2021-10-25 09:35:16.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250839: ['FBtr0335404', 'FBtr0078847', 'FBtr0305963', 'FBtr0305964'] 2021-10-25 09:35:16.645 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12907244, 12907308)] 2021-10-25 09:35:16.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050293: ['FBtr0071544'] 2021-10-25 09:35:16.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050293 has a single transcript. 2021-10-25 09:35:16.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9681911, 9681969), (9682275, 9682335), (9682541, 9682603), (9682878, 9682937), (9683166, 9683647), (9683881, 9683949)] 2021-10-25 09:35:16.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3771754, 3772460), (3771784, 3772460), (3771867, 3772460), (3771873, 3772460), (3772015, 3772460), (3772316, 3772460), (3772694, 3779692), (3779317, 3779692), (3780579, 3781903)] 2021-10-25 09:35:16.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.654 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050295: ['FBtr0071515', 'FBtr0113368', 'FBtr0342794', 'FBtr0332465'] 2021-10-25 09:35:16.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16341421, 16341480), (16341782, 16341843), (16342415, 16342476), (16342654, 16342722), (16342770, 16343005), (16343035, 16343094), (16343324, 16344033)] 2021-10-25 09:35:16.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.676 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263133: ['FBtr0079413'] 2021-10-25 09:35:16.676 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263133 has a single transcript. 2021-10-25 09:35:16.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263143: ['FBtr0084323'] 2021-10-25 09:35:16.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263143 has a single transcript. 2021-10-25 09:35:16.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263144: ['FBtr0336519', 'FBtr0085992', 'FBtr0085993', 'FBtr0346718'] 2021-10-25 09:35:16.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030434: ['FBtr0073693'] 2021-10-25 09:35:16.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030434 has a single transcript. 2021-10-25 09:35:16.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030435: ['FBtr0073692', 'FBtr0346316', 'FBtr0343649'] 2021-10-25 09:35:16.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037731: ['FBtr0082084'] 2021-10-25 09:35:16.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037731 has a single transcript. 2021-10-25 09:35:16.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034118: ['FBtr0087150', 'FBtr0340060'] 2021-10-25 09:35:16.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037734: ['FBtr0082091'] 2021-10-25 09:35:16.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037734 has a single transcript. 2021-10-25 09:35:16.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037736: ['FBtr0082170', 'FBtr0331695'] 2021-10-25 09:35:16.743 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4957223, 4957289), (4957238, 4957289), (4957442, 4957500), (4957634, 4959636), (4959758, 4959903), (4960022, 4960667), (4960022, 4960893), (4960973, 4961311)] 2021-10-25 09:35:16.744 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4960893, 4961351, 'FBtr0305964_exon_1') contains intron (4960973, 4961311) 2021-10-25 09:35:16.744 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305964_exon_1'] 2021-10-25 09:35:16.744 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.745 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20870903, 20871317), (20872005, 20872539), (20872692, 20873650), (20873751, 20875237), (20874757, 20874815), (20874996, 20875237), (20875546, 20875604), (20875663, 20876474), (20876621, 20877254), (20877312, 20877618), (20878221, 20878671), (20878898, 20878970), (20878898, 20878967)] 2021-10-25 09:35:16.746 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.746 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:16.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12910688, 12910752), (12910959, 12911023), (12911116, 12911412)] 2021-10-25 09:35:16.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9735390, 9735494), (9735692, 9735751), (9736029, 9736096), (9736271, 9736338), (9736472, 9736532), (9736655, 9736719), (9736890, 9737118), (9737278, 9737344), (9737475, 9737539), (9737684, 9737751), (9737903, 9737993), (9738200, 9738278), (9738389, 9738519), (9738728, 9738820), (9738950, 9739253)] 2021-10-25 09:35:16.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6214751, 6233265), (6221276, 6233265), (6221276, 6233255), (6229657, 6233265), (6234307, 6234768), (6236059, 6237342), (6237541, 6237602), (6238672, 6238763), (6238910, 6238982)] 2021-10-25 09:35:16.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.789 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034120: ['FBtr0087169'] 2021-10-25 09:35:16.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034120 has a single transcript. 2021-10-25 09:35:16.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034121: ['FBtr0087152', 'FBtr0087151', 'FBtr0087153'] 2021-10-25 09:35:16.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037737: ['FBtr0082126', 'FBtr0113210'] 2021-10-25 09:35:16.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030437: ['FBtr0073753', 'FBtr0343652'] 2021-10-25 09:35:16.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9741142, 9741198), (9741968, 9742199)] 2021-10-25 09:35:16.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250841: ['FBtr0335162', 'FBtr0077803'] 2021-10-25 09:35:16.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16359902, 16359970), (16360154, 16360223), (16360154, 16360242), (16361523, 16361710)] 2021-10-25 09:35:16.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12951683, 12951746), (12951820, 12951944), (12952063, 12952306), (12952408, 12952501), (12952628, 12952729), (12952821, 12952886), (12952977, 12953532), (12953833, 12954364), (12954583, 12957217)] 2021-10-25 09:35:16.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050296: ['FBtr0071527', 'FBtr0071528', 'FBtr0113369', 'FBtr0113371', 'FBtr0301892', 'FBtr0301893', 'FBtr0301894', 'FBtr0301895', 'FBtr0301896', 'FBtr0301897', 'FBtr0301898', 'FBtr0301899', 'FBtr0301900', 'FBtr0301901', 'FBtr0301902', 'FBtr0310056', 'FBtr0310057', 'FBtr0342838', 'FBtr0342839'] 2021-10-25 09:35:16.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004895: ['FBtr0073192', 'FBtr0309789'] 2021-10-25 09:35:16.944 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:16.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037739: ['FBtr0082167', 'FBtr0345176'] 2021-10-25 09:35:16.945 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.945 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263197: ['FBtr0300603', 'FBtr0086948', 'FBtr0273447', 'FBtr0273446', 'FBtr0086949', 'FBtr0086950', 'FBtr0332260', 'FBtr0332261', 'FBtr0332262', 'FBtr0332263', 'FBtr0332264', 'FBtr0332265', 'FBtr0332266'] 2021-10-25 09:35:16.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030438: ['FBtr0305600'] 2021-10-25 09:35:16.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030438 has a single transcript. 2021-10-25 09:35:16.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030439: ['FBtr0073752'] 2021-10-25 09:35:16.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030439 has a single transcript. 2021-10-25 09:35:16.979 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4019464, 4020396), (4020652, 4020708)] 2021-10-25 09:35:16.980 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.980 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:16.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030440: ['FBtr0309878', 'FBtr0310532'] 2021-10-25 09:35:16.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9746988, 9747047)] 2021-10-25 09:35:16.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:16.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034122: ['FBtr0087167', 'FBtr0340061'] 2021-10-25 09:35:17.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250842: ['FBtr0087819', 'FBtr0302939'] 2021-10-25 09:35:17.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13004376, 13004429), (13004508, 13004567), (13004783, 13004849)] 2021-10-25 09:35:17.032 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004896: ['FBtr0071898'] 2021-10-25 09:35:17.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004896 has a single transcript. 2021-10-25 09:35:17.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:17.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.043 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004897: ['FBtr0084770', 'FBtr0339246'] 2021-10-25 09:35:17.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12845892, 12845955), (12845913, 12845955), (12846410, 12846464)] 2021-10-25 09:35:17.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.050 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037741: ['FBtr0082166'] 2021-10-25 09:35:17.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037741 has a single transcript. 2021-10-25 09:35:17.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037742: ['FBtr0301536', 'FBtr0332172'] 2021-10-25 09:35:17.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030441: ['FBtr0073717'] 2021-10-25 09:35:17.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030441 has a single transcript. 2021-10-25 09:35:17.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:17.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030443: ['FBtr0073750', 'FBtr0343602'] 2021-10-25 09:35:17.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034126: ['FBtr0087157'] 2021-10-25 09:35:17.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034126 has a single transcript. 2021-10-25 09:35:17.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250843: ['FBtr0343606', 'FBtr0079948'] 2021-10-25 09:35:17.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034127: ['FBtr0087160'] 2021-10-25 09:35:17.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034127 has a single transcript. 2021-10-25 09:35:17.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9755571, 9755619), (9756176, 9756490)] 2021-10-25 09:35:17.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034128: ['FBtr0113085'] 2021-10-25 09:35:17.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034128 has a single transcript. 2021-10-25 09:35:17.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034129: ['FBtr0087159'] 2021-10-25 09:35:17.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034129 has a single transcript. 2021-10-25 09:35:17.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13054763, 13055138)] 2021-10-25 09:35:17.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034131: ['FBtr0087127'] 2021-10-25 09:35:17.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034131 has a single transcript. 2021-10-25 09:35:17.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034132: ['FBtr0087087'] 2021-10-25 09:35:17.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034132 has a single transcript. 2021-10-25 09:35:17.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004898: ['FBtr0084771'] 2021-10-25 09:35:17.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004898 has a single transcript. 2021-10-25 09:35:17.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10221445, 10221513), (10222143, 10222201)] 2021-10-25 09:35:17.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034135: ['FBtr0087093', 'FBtr0087094', 'FBtr0087095', 'FBtr0087097'] 2021-10-25 09:35:17.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004901: ['FBtr0081764', 'FBtr0304705'] 2021-10-25 09:35:17.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037743: ['FBtr0082130'] 2021-10-25 09:35:17.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037743 has a single transcript. 2021-10-25 09:35:17.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037744: ['FBtr0082131'] 2021-10-25 09:35:17.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037744 has a single transcript. 2021-10-25 09:35:17.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037746: ['FBtr0082133', 'FBtr0332171', 'FBtr0301870', 'FBtr0301871'] 2021-10-25 09:35:17.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030447: ['FBtr0073721', 'FBtr0340301'] 2021-10-25 09:35:17.215 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7911613, 7911693), (7911616, 7911693)] 2021-10-25 09:35:17.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250844: ['FBtr0080662', 'FBtr0344772', 'FBtr0343703', 'FBtr0343704'] 2021-10-25 09:35:17.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13094673, 13094772), (13095333, 13095444)] 2021-10-25 09:35:17.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.265 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17520579, 17520645), (17520928, 17524083), (17520928, 17521831), (17520928, 17523823), (17520928, 17521705), (17520928, 17523499), (17520928, 17522852), (17521900, 17523499), (17521900, 17522852), (17521900, 17524083), (17521900, 17523823), (17521906, 17522852), (17522960, 17524083), (17522960, 17523823), (17522960, 17523499), (17523571, 17524083), (17523571, 17523823), (17523898, 17524083), (17524282, 17524347), (17524584, 17524703), (17526317, 17526833), (17526317, 17527213), (17526413, 17527213), (17526413, 17526833), (17526416, 17526833), (17526416, 17527213), (17526980, 17527213), (17527312, 17527375), (17527315, 17527375), (17527748, 17527822), (17528105, 17531046), (17528105, 17529981), (17528105, 17528312), (17528105, 17528621), (17528375, 17528621), (17528852, 17529086), (17528852, 17531046), (17528852, 17529981), (17529191, 17531046), (17529191, 17529981), (17530134, 17531046), (17531147, 17531210), (17531446, 17531517), (17531461, 17531517), (17531653, 17531713), (17531802, 17531870), (17532182, 17534825), (17535061, 17535693)] 2021-10-25 09:35:17.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16552425, 16554627), (16552621, 16554627), (16554692, 16554758), (16554908, 16554967), (16555253, 16555604), (16555253, 16555318), (16555483, 16555604), (16555789, 16555844), (16556003, 16556068), (16556293, 16556352), (16556556, 16556618)] 2021-10-25 09:35:17.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004903: ['FBtr0100339', 'FBtr0085092', 'FBtr0085093', 'FBtr0100334', 'FBtr0100335', 'FBtr0100336', 'FBtr0100337', 'FBtr0100338', 'FBtr0100340'] 2021-10-25 09:35:17.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9763935, 9764025), (9763935, 9764037), (9763935, 9764040), (9764626, 9764680), (9765547, 9765608)] 2021-10-25 09:35:17.288 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030449: ['FBtr0073745'] 2021-10-25 09:35:17.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030449 has a single transcript. 2021-10-25 09:35:17.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030451: ['FBtr0073723', 'FBtr0339676', 'FBtr0344608'] 2021-10-25 09:35:17.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21017912, 21019158), (21017952, 21019158), (21018268, 21019158), (21018758, 21019158), (21019082, 21019158), (21019582, 21019739), (21019582, 21020086), (21019859, 21020086), (21020241, 21020992), (21021133, 21021190), (21021317, 21023064), (21021317, 21021885), (21021317, 21021500), (21021521, 21023064), (21021521, 21021885), (21022133, 21022333), (21022133, 21023064), (21022133, 21023433), (21022462, 21023433), (21023165, 21023433), (21023586, 21023661), (21023586, 21023975), (21023754, 21023975), (21024125, 21024182)] 2021-10-25 09:35:17.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13129026, 13129098), (13129188, 13129305), (13130036, 13131178), (13131971, 13132931)] 2021-10-25 09:35:17.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13129017, 13129188, 'FBtr0073723_exon_1') contains intron (13129026, 13129098) 2021-10-25 09:35:17.379 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13129017, 13129188, 'FBtr0339676_exon_1') contains intron (13129026, 13129098) 2021-10-25 09:35:17.379 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073723_exon_1', 'FBtr0339676_exon_1'] 2021-10-25 09:35:17.379 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14547795, 14547866), (14547812, 14547866), (14548254, 14548650), (14548585, 14548650)] 2021-10-25 09:35:17.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.385 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034136: ['FBtr0087125', 'FBtr0330002'] 2021-10-25 09:35:17.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037747: ['FBtr0082134', 'FBtr0100583'] 2021-10-25 09:35:17.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030452: ['FBtr0073724', 'FBtr0339678', 'FBtr0339677'] 2021-10-25 09:35:17.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16560017, 16560072), (16560310, 16560373), (16560751, 16560808), (16560981, 16561042), (16561197, 16561261), (16561396, 16563770), (16564024, 16564982)] 2021-10-25 09:35:17.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26873555, 26873859), (26873678, 26873859), (26873998, 26874070), (26873998, 26874066), (26874016, 26874070), (26874790, 26874856), (26875101, 26875173), (26875403, 26875543)] 2021-10-25 09:35:17.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26872582, 26873998, 'FBtr0100338_exon_5') contains intron (26873555, 26873859) 2021-10-25 09:35:17.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26872582, 26874016, 'FBtr0100340_exon_5') contains intron (26873555, 26873859) 2021-10-25 09:35:17.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100338_exon_5', 'FBtr0100340_exon_5'] 2021-10-25 09:35:17.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9768140, 9768922), (9768140, 9768744), (9768838, 9768922)] 2021-10-25 09:35:17.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.503 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087125': ['FBtr0330002']} 2021-10-25 09:35:17.503 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330002']] 2021-10-25 09:35:17.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034137: ['FBtr0087099', 'FBtr0087100', 'FBtr0087098', 'FBtr0340062'] 2021-10-25 09:35:17.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13129188, 13129305), (13130036, 13131178), (13131971, 13132931)] 2021-10-25 09:35:17.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250845: ['FBtr0081604', 'FBtr0334889'] 2021-10-25 09:35:17.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037749: ['FBtr0082160', 'FBtr0113211'] 2021-10-25 09:35:17.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9771240, 9771295), (9771381, 9771445)] 2021-10-25 09:35:17.595 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9771295, 9771542, 'FBtr0082160_exon_1') contains intron (9771381, 9771445) 2021-10-25 09:35:17.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082160_exon_1'] 2021-10-25 09:35:17.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7207708, 7207763)] 2021-10-25 09:35:17.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16566262, 16566604), (16566262, 16566768), (16566262, 16566852), (16566277, 16566768), (16566992, 16567784), (16568046, 16568108), (16568208, 16568309), (16568492, 16568557), (16569044, 16569158), (16569528, 16569855), (16569528, 16569909)] 2021-10-25 09:35:17.607 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16569158, 16570120, 'FBtr0087099_exon_7') contains intron (16569528, 16569855) 2021-10-25 09:35:17.608 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16569158, 16570120, 'FBtr0087100_exon_7') contains intron (16569528, 16569855) 2021-10-25 09:35:17.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087099_exon_7', 'FBtr0087100_exon_7'] 2021-10-25 09:35:17.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030455: ['FBtr0301690'] 2021-10-25 09:35:17.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030455 has a single transcript. 2021-10-25 09:35:17.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037750: ['FBtr0082159', 'FBtr0110789', 'FBtr0334687', 'FBtr0334688', 'FBtr0334689'] 2021-10-25 09:35:17.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030456: ['FBtr0073726'] 2021-10-25 09:35:17.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030456 has a single transcript. 2021-10-25 09:35:17.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250846: ['FBtr0301286', 'FBtr0337024', 'FBtr0337025'] 2021-10-25 09:35:17.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030457: ['FBtr0073727', 'FBtr0340298', 'FBtr0340299'] 2021-10-25 09:35:17.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13161033, 13161089)] 2021-10-25 09:35:17.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6607697, 6608100), (6608206, 6608333), (6608502, 6608593), (6608541, 6608593)] 2021-10-25 09:35:17.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034138: ['FBtr0087123', 'FBtr0087124'] 2021-10-25 09:35:17.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9772137, 9772195), (9773149, 9773200), (9773635, 9774319), (9773635, 9773737), (9773635, 9774310), (9773978, 9774310), (9773978, 9774319)] 2021-10-25 09:35:17.770 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9773200, 9773978, 'FBtr0110789_exon_2') contains intron (9773635, 9773737) 2021-10-25 09:35:17.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110789_exon_2'] 2021-10-25 09:35:17.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16570384, 16570625), (16570848, 16570916), (16571005, 16571188)] 2021-10-25 09:35:17.813 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16570916, 16571230, 'FBtr0087124_exon_1') contains intron (16571005, 16571188) 2021-10-25 09:35:17.814 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087124_exon_1'] 2021-10-25 09:35:17.814 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030459: ['FBtr0073738'] 2021-10-25 09:35:17.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030459 has a single transcript. 2021-10-25 09:35:17.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250847: ['FBtr0110802', 'FBtr0346459'] 2021-10-25 09:35:17.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030460: ['FBtr0073737', 'FBtr0346124', 'FBtr0346125'] 2021-10-25 09:35:17.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004907: ['FBtr0088414', 'FBtr0088415', 'FBtr0088412', 'FBtr0088416', 'FBtr0088418', 'FBtr0088419', 'FBtr0088417', 'FBtr0088413', 'FBtr0100182', 'FBtr0100183', 'FBtr0332916', 'FBtr0332917'] 2021-10-25 09:35:17.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034139: ['FBtr0100547'] 2021-10-25 09:35:17.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034139 has a single transcript. 2021-10-25 09:35:17.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263198: ['FBtr0081145', 'FBtr0081144', 'FBtr0336842'] 2021-10-25 09:35:17.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034140: ['FBtr0087122', 'FBtr0306005', 'FBtr0306006'] 2021-10-25 09:35:17.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5215421, 5215473), (5215642, 5215704), (5216282, 5216334), (5216437, 5216486)] 2021-10-25 09:35:17.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13193634, 13193687), (13194106, 13194164)] 2021-10-25 09:35:17.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:17.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250848: ['FBtr0075766'] 2021-10-25 09:35:17.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250848 has a single transcript. 2021-10-25 09:35:17.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16575299, 16576272), (16575338, 16576272)] 2021-10-25 09:35:17.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19045436, 19045521), (19047047, 19047151), (19047362, 19047419), (19047654, 19047715), (19047825, 19047913)] 2021-10-25 09:35:17.943 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16574578, 16576586, 'FBtr0306006_exon_1') contains intron (16575299, 16576272) 2021-10-25 09:35:17.943 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19045354, 19047047, 'FBtr0081144_exon_1') contains intron (19045436, 19045521) 2021-10-25 09:35:17.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306006_exon_1'] 2021-10-25 09:35:17.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.944 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19045354, 19047047, 'FBtr0336842_exon_1') contains intron (19045436, 19045521) 2021-10-25 09:35:17.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081144_exon_1', 'FBtr0336842_exon_1'] 2021-10-25 09:35:17.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:17.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250849: ['FBtr0076933'] 2021-10-25 09:35:17.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250849 has a single transcript. 2021-10-25 09:35:17.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250850: ['FBtr0086252'] 2021-10-25 09:35:17.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250850 has a single transcript. 2021-10-25 09:35:17.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037751: ['FBtr0082135'] 2021-10-25 09:35:17.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037751 has a single transcript. 2021-10-25 09:35:17.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250851: ['FBtr0329953', 'FBtr0100025', 'FBtr0100026'] 2021-10-25 09:35:17.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037753: ['FBtr0113213'] 2021-10-25 09:35:17.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037753 has a single transcript. 2021-10-25 09:35:17.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037754: ['FBtr0082139', 'FBtr0347364'] 2021-10-25 09:35:17.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030462: ['FBtr0073733', 'FBtr0290202', 'FBtr0290203'] 2021-10-25 09:35:18.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9784760, 9785751), (9785698, 9785751), (9786077, 9786134), (9786320, 9786376), (9786448, 9786584)] 2021-10-25 09:35:18.036 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.036 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034141: ['FBtr0087121'] 2021-10-25 09:35:18.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034141 has a single transcript. 2021-10-25 09:35:18.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17775435, 17775492), (17775654, 17775716), (17775874, 17775933), (17776096, 17776157), (17778152, 17778212), (17780469, 17780600), (17781279, 17781340), (17781487, 17781769)] 2021-10-25 09:35:18.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034142: ['FBtr0087120'] 2021-10-25 09:35:18.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034142 has a single transcript. 2021-10-25 09:35:18.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263199: ['FBtr0076555', 'FBtr0076553', 'FBtr0076554', 'FBtr0303234'] 2021-10-25 09:35:18.059 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329953': ['FBtr0100025']} 2021-10-25 09:35:18.059 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0100025']] 2021-10-25 09:35:18.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034143: ['FBtr0340064', 'FBtr0340065'] 2021-10-25 09:35:18.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13258186, 13258383), (13258225, 13258353)] 2021-10-25 09:35:18.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16595552, 16595622), (16595880, 16595940), (16596382, 16596435), (16596940, 16597903), (16598263, 16604287), (16598263, 16604128)] 2021-10-25 09:35:18.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037755: ['FBtr0113214', 'FBtr0334685', 'FBtr0347361'] 2021-10-25 09:35:18.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250862: ['FBtr0340302', 'FBtr0073722'] 2021-10-25 09:35:18.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10099738, 10104255), (10099850, 10104255), (10101097, 10104255), (10101177, 10104255), (10103141, 10104255), (10104183, 10104255), (10104409, 10104716), (10104830, 10104940), (10105067, 10105701), (10105825, 10106633), (10105825, 10106288), (10105825, 10105940), (10106104, 10107466), (10106452, 10107466), (10106797, 10107466)] 2021-10-25 09:35:18.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050297: ['FBtr0088787'] 2021-10-25 09:35:18.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050297 has a single transcript. 2021-10-25 09:35:18.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8983473, 8983531), (8983736, 8983933), (8984667, 8984812), (8984986, 8985052), (8985231, 8985418), (8985231, 8985283), (8985231, 8985976), (8985308, 8985418), (8985667, 8985976)] 2021-10-25 09:35:18.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050298: ['FBtr0089059'] 2021-10-25 09:35:18.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050298 has a single transcript. 2021-10-25 09:35:18.152 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8985052, 8985308, 'FBtr0076554_exon_3') contains intron (8985231, 8985283) 2021-10-25 09:35:18.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076554_exon_3'] 2021-10-25 09:35:18.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030465: ['FBtr0073755', 'FBtr0346123', 'FBtr0333330'] 2021-10-25 09:35:18.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050299: ['FBtr0089058'] 2021-10-25 09:35:18.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050299 has a single transcript. 2021-10-25 09:35:18.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034144: ['FBtr0087107'] 2021-10-25 09:35:18.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034144 has a single transcript. 2021-10-25 09:35:18.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050316: ['FBtr0085986'] 2021-10-25 09:35:18.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050316 has a single transcript. 2021-10-25 09:35:18.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9789881, 9789953), (9790084, 9790137), (9790265, 9790319), (9790460, 9790525), (9790744, 9790838), (9790771, 9790838)] 2021-10-25 09:35:18.169 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13115319, 13120651), (13115393, 13120651), (13120961, 13121605), (13121722, 13122105), (13122386, 13122449), (13122609, 13122685)] 2021-10-25 09:35:18.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050323: ['FBtr0273321', 'FBtr0336700'] 2021-10-25 09:35:18.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034145: ['FBtr0087108', 'FBtr0302205', 'FBtr0302206', 'FBtr0306249', 'FBtr0306250'] 2021-10-25 09:35:18.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17853832, 17853907)] 2021-10-25 09:35:18.220 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17853294, 17854296, 'FBtr0273321_exon_1') contains intron (17853832, 17853907) 2021-10-25 09:35:18.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273321_exon_1'] 2021-10-25 09:35:18.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13286879, 13286955)] 2021-10-25 09:35:18.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.227 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250867: ['FBtr0331199', 'FBtr0331200', 'FBtr0347554', 'FBtr0290305', 'FBtr0290306'] 2021-10-25 09:35:18.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050324: ['FBtr0087181'] 2021-10-25 09:35:18.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050324 has a single transcript. 2021-10-25 09:35:18.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050325: ['FBtr0086821'] 2021-10-25 09:35:18.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050325 has a single transcript. 2021-10-25 09:35:18.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16607959, 16618803), (16608334, 16618803), (16609325, 16618803), (16612573, 16618803), (16618143, 16618803), (16619689, 16621324), (16621441, 16621505), (16621610, 16621672), (16621816, 16621884), (16622019, 16622084), (16622205, 16622274), (16622574, 16622657), (16622790, 16622873), (16623131, 16623214)] 2021-10-25 09:35:18.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050326: ['FBtr0086528'] 2021-10-25 09:35:18.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050326 has a single transcript. 2021-10-25 09:35:18.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263200: ['FBtr0079322', 'FBtr0333352'] 2021-10-25 09:35:18.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050333: ['FBtr0086898'] 2021-10-25 09:35:18.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050333 has a single transcript. 2021-10-25 09:35:18.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030466: ['FBtr0073756'] 2021-10-25 09:35:18.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030466 has a single transcript. 2021-10-25 09:35:18.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050334: ['FBtr0087949', 'FBtr0305078'] 2021-10-25 09:35:18.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030467: ['FBtr0339946', 'FBtr0073796'] 2021-10-25 09:35:18.358 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6667008, 6667085), (6667291, 6667360), (6667530, 6667670)] 2021-10-25 09:35:18.358 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20966080, 20966303), (20967746, 20969164), (20967746, 20968786), (20967746, 20968635), (20967746, 21051773), (20969523, 20993232), (20993377, 21028634), (20993377, 21019775), (21019777, 21028636), (21028681, 21051002), (21051422, 21051773)] 2021-10-25 09:35:18.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.359 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965519, 20967746, 'FBtr0331199_exon_7') contains intron (20966080, 20966303) 2021-10-25 09:35:18.359 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965519, 20967746, 'FBtr0347554_exon_6') contains intron (20966080, 20966303) 2021-10-25 09:35:18.360 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965519, 20967746, 'FBtr0290305_exon_2') contains intron (20966080, 20966303) 2021-10-25 09:35:18.360 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20965519, 20967746, 'FBtr0290306_exon_2') contains intron (20966080, 20966303) 2021-10-25 09:35:18.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331199_exon_7', 'FBtr0347554_exon_6', 'FBtr0290305_exon_2', 'FBtr0290306_exon_2'] 2021-10-25 09:35:18.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.360 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12441120, 12441187), (12441137, 12441187)] 2021-10-25 09:35:18.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.380 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13295096, 13295157), (13295382, 13295526), (13295624, 13295688), (13296011, 13296512), (13296712, 13302105)] 2021-10-25 09:35:18.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050338: ['FBtr0088533'] 2021-10-25 09:35:18.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050338 has a single transcript. 2021-10-25 09:35:18.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263201: ['FBtr0309751'] 2021-10-25 09:35:18.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263201 has a single transcript. 2021-10-25 09:35:18.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050339: ['FBtr0088534'] 2021-10-25 09:35:18.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050339 has a single transcript. 2021-10-25 09:35:18.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263206: ['FBtr0307577'] 2021-10-25 09:35:18.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263206 has a single transcript. 2021-10-25 09:35:18.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037756: ['FBtr0082140'] 2021-10-25 09:35:18.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037756 has a single transcript. 2021-10-25 09:35:18.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050340: ['FBtr0088535'] 2021-10-25 09:35:18.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050340 has a single transcript. 2021-10-25 09:35:18.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263207: ['FBtr0307587'] 2021-10-25 09:35:18.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263207 has a single transcript. 2021-10-25 09:35:18.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037757: ['FBtr0082141'] 2021-10-25 09:35:18.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037757 has a single transcript. 2021-10-25 09:35:18.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030468: ['FBtr0339945', 'FBtr0073757', 'FBtr0310465'] 2021-10-25 09:35:18.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050342: ['FBtr0088582'] 2021-10-25 09:35:18.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050342 has a single transcript. 2021-10-25 09:35:18.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037758: ['FBtr0082156'] 2021-10-25 09:35:18.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037758 has a single transcript. 2021-10-25 09:35:18.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263208: ['FBtr0307586'] 2021-10-25 09:35:18.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263208 has a single transcript. 2021-10-25 09:35:18.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050343: ['FBtr0088594', 'FBtr0308205'] 2021-10-25 09:35:18.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037759: ['FBtr0082142', 'FBtr0334682'] 2021-10-25 09:35:18.454 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263209: ['FBtr0307585'] 2021-10-25 09:35:18.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263209 has a single transcript. 2021-10-25 09:35:18.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263210: ['FBtr0307584'] 2021-10-25 09:35:18.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263210 has a single transcript. 2021-10-25 09:35:18.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263211: ['FBtr0307583'] 2021-10-25 09:35:18.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263211 has a single transcript. 2021-10-25 09:35:18.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263212: ['FBtr0307582'] 2021-10-25 09:35:18.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263212 has a single transcript. 2021-10-25 09:35:18.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263213: ['FBtr0307581'] 2021-10-25 09:35:18.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263213 has a single transcript. 2021-10-25 09:35:18.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9801576, 9801628), (9801852, 9801916), (9801852, 9801913)] 2021-10-25 09:35:18.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9252165, 9252225), (9252310, 9252361), (9252512, 9252572)] 2021-10-25 09:35:18.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9252020, 9253255, 'FBtr0088594_exon_1') contains intron (9252165, 9252225) 2021-10-25 09:35:18.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088594_exon_1'] 2021-10-25 09:35:18.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263214: ['FBtr0307580'] 2021-10-25 09:35:18.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263214 has a single transcript. 2021-10-25 09:35:18.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13297239, 13297306), (13297447, 13297526), (13297651, 13297746), (13297882, 13298705), (13298187, 13298705), (13298812, 13298895), (13298823, 13298895)] 2021-10-25 09:35:18.507 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034151: ['FBtr0087083'] 2021-10-25 09:35:18.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034151 has a single transcript. 2021-10-25 09:35:18.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263215: ['FBtr0307589'] 2021-10-25 09:35:18.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263215 has a single transcript. 2021-10-25 09:35:18.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034152: ['FBtr0087082', 'FBtr0345494'] 2021-10-25 09:35:18.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263216: ['FBtr0307591', 'FBtr0307592', 'FBtr0307593'] 2021-10-25 09:35:18.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050344: ['FBtr0088583'] 2021-10-25 09:35:18.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050344 has a single transcript. 2021-10-25 09:35:18.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037760: ['FBtr0082155', 'FBtr0334684'] 2021-10-25 09:35:18.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050345: ['FBtr0305317'] 2021-10-25 09:35:18.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050345 has a single transcript. 2021-10-25 09:35:18.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16748453, 16748505)] 2021-10-25 09:35:18.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250868: ['FBtr0290307'] 2021-10-25 09:35:18.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250868 has a single transcript. 2021-10-25 09:35:18.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050349: ['FBtr0088650'] 2021-10-25 09:35:18.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050349 has a single transcript. 2021-10-25 09:35:18.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250869: ['FBtr0330208', 'FBtr0290308', 'FBtr0339775'] 2021-10-25 09:35:18.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050350: ['FBtr0088636'] 2021-10-25 09:35:18.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050350 has a single transcript. 2021-10-25 09:35:18.591 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050354: ['FBtr0088702', 'FBtr0333002'] 2021-10-25 09:35:18.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030474: ['FBtr0073766', 'FBtr0346618'] 2021-10-25 09:35:18.600 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9966863, 9967023), (9967173, 9970352), (9967951, 9968018), (9968108, 9970352), (9970520, 9970615), (9970520, 9977158)] 2021-10-25 09:35:18.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.602 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9805018, 9805099), (9806174, 9806237), (9806418, 9806519)] 2021-10-25 09:35:18.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:18.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:18.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004908: ['FBtr0081838'] 2021-10-25 09:35:18.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004908 has a single transcript. 2021-10-25 09:35:18.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034153: ['FBtr0087081', 'FBtr0345493'] 2021-10-25 09:35:18.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004910: ['FBtr0073174', 'FBtr0303420', 'FBtr0303421', 'FBtr0303422'] 2021-10-25 09:35:19.218 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13338385, 13338451), (13340427, 13340517)] 2021-10-25 09:35:19.219 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13338451, 13341009, 'FBtr0073766_exon_2') contains intron (13340427, 13340517) 2021-10-25 09:35:19.219 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073766_exon_2'] 2021-10-25 09:35:19.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.224 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8677270, 8677326)] 2021-10-25 09:35:19.225 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8677218, 8677661, 'FBtr0333002_exon_1') contains intron (8677270, 8677326) 2021-10-25 09:35:19.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333002_exon_1'] 2021-10-25 09:35:19.226 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:19.226 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.227 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.238 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330208': ['FBtr0290308']} 2021-10-25 09:35:19.238 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0290308']] 2021-10-25 09:35:19.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16749323, 16749379)] 2021-10-25 09:35:19.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037761: ['FBtr0082143'] 2021-10-25 09:35:19.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037761 has a single transcript. 2021-10-25 09:35:19.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037762: ['FBtr0082144'] 2021-10-25 09:35:19.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037762 has a single transcript. 2021-10-25 09:35:19.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037763: ['FBtr0082154'] 2021-10-25 09:35:19.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037763 has a single transcript. 2021-10-25 09:35:19.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037764: ['FBtr0082153'] 2021-10-25 09:35:19.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037764 has a single transcript. 2021-10-25 09:35:19.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037765: ['FBtr0082152'] 2021-10-25 09:35:19.397 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037765 has a single transcript. 2021-10-25 09:35:19.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030477: ['FBtr0073768'] 2021-10-25 09:35:19.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030477 has a single transcript. 2021-10-25 09:35:19.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050355: ['FBtr0088726'] 2021-10-25 09:35:19.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050355 has a single transcript. 2021-10-25 09:35:19.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037766: ['FBtr0082151', 'FBtr0330082'] 2021-10-25 09:35:19.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250871: ['FBtr0305609', 'FBtr0073594', 'FBtr0073595'] 2021-10-25 09:35:19.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050356: ['FBtr0088717'] 2021-10-25 09:35:19.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050356 has a single transcript. 2021-10-25 09:35:19.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030478: ['FBtr0073769', 'FBtr0073770', 'FBtr0073771', 'FBtr0073772', 'FBtr0073773', 'FBtr0073774', 'FBtr0339837'] 2021-10-25 09:35:19.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050357: ['FBtr0088721'] 2021-10-25 09:35:19.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050357 has a single transcript. 2021-10-25 09:35:19.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3911914, 3913625), (3913774, 3913851), (3914002, 3919883), (3920027, 3928997), (3920027, 3924223), (3920027, 3930812), (3924474, 3925462), (3930852, 3930957), (3930996, 3935485), (3930996, 3933246)] 2021-10-25 09:35:19.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050359: ['FBtr0088749', 'FBtr0300953', 'FBtr0339279'] 2021-10-25 09:35:19.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263217: ['FBtr0307594'] 2021-10-25 09:35:19.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034154: ['FBtr0087021'] 2021-10-25 09:35:19.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263217 has a single transcript. 2021-10-25 09:35:19.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034154 has a single transcript. 2021-10-25 09:35:19.487 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9828795, 9864968), (9866339, 9867667)] 2021-10-25 09:35:19.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.489 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034156: ['FBtr0305318', 'FBtr0305319'] 2021-10-25 09:35:19.497 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082151': ['FBtr0330082']} 2021-10-25 09:35:19.497 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330082']] 2021-10-25 09:35:19.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263219: ['FBtr0299839', 'FBtr0299841', 'FBtr0299840', 'FBtr0333589', 'FBtr0333590'] 2021-10-25 09:35:19.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037770: ['FBtr0082150', 'FBtr0333687'] 2021-10-25 09:35:19.574 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11908729, 11908812), (11911015, 11911070), (11911210, 11911285), (11911423, 11911493), (11911577, 11912230), (11912471, 11913411), (11912471, 11917068), (11913446, 11917068)] 2021-10-25 09:35:19.576 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.576 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9983998, 9984056), (9984467, 9984521), (9985415, 9985477)] 2021-10-25 09:35:19.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8463055, 8463112), (8463573, 8463630), (8464083, 8464144), (8464453, 8464510), (8464599, 8464652), (8464796, 8464863)] 2021-10-25 09:35:19.662 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8464144, 8464599, 'FBtr0088749_exon_4') contains intron (8464453, 8464510) 2021-10-25 09:35:19.662 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8462752, 8463573, 'FBtr0300953_exon_1') contains intron (8463055, 8463112) 2021-10-25 09:35:19.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8464144, 8464599, 'FBtr0300953_exon_3') contains intron (8464453, 8464510) 2021-10-25 09:35:19.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088749_exon_4', 'FBtr0300953_exon_1', 'FBtr0300953_exon_3'] 2021-10-25 09:35:19.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16767179, 16767236), (16767571, 16767640), (16767715, 16767775), (16768258, 16768330), (16768479, 16768541), (16768776, 16768834)] 2021-10-25 09:35:19.664 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16767236, 16767715, 'FBtr0305319_exon_2') contains intron (16767571, 16767640) 2021-10-25 09:35:19.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305319_exon_2'] 2021-10-25 09:35:19.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037772: ['FBtr0082171'] 2021-10-25 09:35:19.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037772 has a single transcript. 2021-10-25 09:35:19.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034157: ['FBtr0087024', 'FBtr0087025'] 2021-10-25 09:35:19.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037773: ['FBtr0082215', 'FBtr0300257', 'FBtr0306611'] 2021-10-25 09:35:19.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8238820, 8248557), (8241194, 8248557), (8241194, 8248731), (8248951, 8254864), (8255001, 8255352), (8255474, 8255559), (8255618, 8260321), (8260398, 8260600), (8260790, 8262953), (8263119, 8265893), (8265984, 8266346), (8266434, 8266557), (8266706, 8266949), (8267073, 8268995), (8269123, 8269708), (8269845, 8270455), (8270598, 8271449), (8271611, 8272252), (8272397, 8272497), (8272934, 8273175), (8273329, 8274551), (8274669, 8275504), (8275667, 8275986), (8275667, 8276004), (8276502, 8276826), (8276973, 8277430), (8277583, 8277854), (8277949, 8278158), (8279209, 8279275), (8279422, 8279486), (8279821, 8279893), (8279966, 8280259), (8279966, 8280328), (8280409, 8280519), (8280688, 8280759), (8280688, 8280743)] 2021-10-25 09:35:19.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250874: ['FBtr0070497', 'FBtr0347024'] 2021-10-25 09:35:19.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004911: ['FBtr0073162'] 2021-10-25 09:35:19.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004911 has a single transcript. 2021-10-25 09:35:19.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004913: ['FBtr0078837', 'FBtr0100159'] 2021-10-25 09:35:19.843 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13370802, 13373862), (13371060, 13373862), (13371214, 13373862), (13371261, 13373862), (13371367, 13373862), (13371526, 13373862), (13373796, 13373862), (13374103, 13374240), (13374385, 13377857), (13377947, 13378012), (13378275, 13378546), (13379370, 13379432)] 2021-10-25 09:35:19.845 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.845 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.846 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16781567, 16782168), (16781567, 16781906), (16782041, 16782168)] 2021-10-25 09:35:19.847 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:19.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050360: ['FBtr0346647', 'FBtr0273322'] 2021-10-25 09:35:19.867 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10000365, 10000572), (10000368, 10000572), (10000881, 10000939)] 2021-10-25 09:35:19.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:19.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.007 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4906722, 4906788), (4908119, 4908247), (4908119, 4908181), (4909090, 4909148)] 2021-10-25 09:35:20.008 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.008 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2730706, 2730765), (2730889, 2730948), (2731477, 2731533), (2731717, 2731789)] 2021-10-25 09:35:20.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8466312, 8466390), (8466986, 8467055)] 2021-10-25 09:35:20.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034158: ['FBtr0087026', 'FBtr0087027', 'FBtr0087028', 'FBtr0087029', 'FBtr0087030', 'FBtr0087031'] 2021-10-25 09:35:20.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004914: ['FBtr0079747', 'FBtr0079748', 'FBtr0112846', 'FBtr0344784', 'FBtr0336633'] 2021-10-25 09:35:20.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037777: ['FBtr0082205'] 2021-10-25 09:35:20.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037777 has a single transcript. 2021-10-25 09:35:20.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250903: ['FBtr0333419', 'FBtr0336885', 'FBtr0079695', 'FBtr0112743'] 2021-10-25 09:35:20.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037778: ['FBtr0082173'] 2021-10-25 09:35:20.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037778 has a single transcript. 2021-10-25 09:35:20.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037779: ['FBtr0082204'] 2021-10-25 09:35:20.183 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037779 has a single transcript. 2021-10-25 09:35:20.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037780: ['FBtr0082174'] 2021-10-25 09:35:20.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037780 has a single transcript. 2021-10-25 09:35:20.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050361: ['FBtr0088756', 'FBtr0273325', 'FBtr0273326', 'FBtr0273327', 'FBtr0330608'] 2021-10-25 09:35:20.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037781: ['FBtr0082203', 'FBtr0344304'] 2021-10-25 09:35:20.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263220: ['FBtr0307876', 'FBtr0307877', 'FBtr0307878', 'FBtr0307879', 'FBtr0307880', 'FBtr0307881', 'FBtr0331336', 'FBtr0331337', 'FBtr0331338'] 2021-10-25 09:35:20.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10051582, 10051642), (10051585, 10051642), (10052638, 10052695)] 2021-10-25 09:35:20.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16783882, 16788154), (16783882, 16784769), (16784908, 16788154), (16787487, 16788154), (16788260, 16788325), (16788666, 16788790), (16789118, 16789183), (16789635, 16789711), (16789915, 16790738), (16789915, 16790155), (16790266, 16790738)] 2021-10-25 09:35:20.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037782: ['FBtr0082202'] 2021-10-25 09:35:20.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037782 has a single transcript. 2021-10-25 09:35:20.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:20.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8687824, 8687888), (8688548, 8688620), (8688857, 8688920), (8689058, 8689128), (8689625, 8689813), (8690252, 8698848), (8690252, 8692152), (8690252, 8704360), (8690252, 8691013), (8704540, 8708485)] 2021-10-25 09:35:20.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037783: ['FBtr0082176'] 2021-10-25 09:35:20.495 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037783 has a single transcript. 2021-10-25 09:35:20.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037786: ['FBtr0309853'] 2021-10-25 09:35:20.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037786 has a single transcript. 2021-10-25 09:35:20.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8475944, 8476475), (8476659, 8479323), (8479475, 8479852), (8480066, 8480180), (8480343, 8480424), (8480559, 8481216), (8481407, 8481643), (8481777, 8481947), (8482097, 8482605), (8482712, 8482855), (8483027, 8483131), (8483240, 8483602), (8483745, 8486157), (8486302, 8486817), (8486988, 8489216), (8489359, 8493220), (8489359, 8521113), (8494180, 8521113), (8522728, 8531843)] 2021-10-25 09:35:20.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.526 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037788: ['FBtr0082179', 'FBtr0344391', 'FBtr0344392'] 2021-10-25 09:35:20.545 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0273325': ['FBtr0330608']} 2021-10-25 09:35:20.568 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330608']] 2021-10-25 09:35:20.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030479: ['FBtr0073790', 'FBtr0304001', 'FBtr0339838'] 2021-10-25 09:35:20.669 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10112813, 10117608), (10117680, 10118283), (10118442, 10118513)] 2021-10-25 09:35:20.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13381043, 13384299), (13383623, 13384299)] 2021-10-25 09:35:20.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250904: ['FBtr0112735'] 2021-10-25 09:35:20.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250904 has a single transcript. 2021-10-25 09:35:20.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050362: ['FBtr0088769'] 2021-10-25 09:35:20.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050362 has a single transcript. 2021-10-25 09:35:20.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250906: ['FBtr0077739', 'FBtr0330716', 'FBtr0330717', 'FBtr0330718', 'FBtr0334162'] 2021-10-25 09:35:20.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050363: ['FBtr0088770'] 2021-10-25 09:35:20.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050363 has a single transcript. 2021-10-25 09:35:20.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050364: ['FBtr0088772', 'FBtr0339351'] 2021-10-25 09:35:20.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10239545, 10239678), (10239897, 10240680), (10241018, 10241113), (10241021, 10241113), (10241241, 10241417), (10241736, 10242809), (10241736, 10242833), (10241736, 10242836), (10241736, 10254002), (10242880, 10243380), (10242880, 10254002), (10254307, 10255492), (10254307, 10254719), (10255172, 10255492), (10255590, 10257667), (10255590, 10256111), (10258017, 10258877), (10258964, 10259190), (10259488, 10263465), (10259488, 10261254)] 2021-10-25 09:35:20.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.750 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004915: ['FBtr0080025', 'FBtr0333489'] 2021-10-25 09:35:20.776 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0307877': ['FBtr0331337', 'FBtr0331338']} 2021-10-25 09:35:20.776 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331337', 'FBtr0331338']] 2021-10-25 09:35:20.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037792: ['FBtr0082185', 'FBtr0333824', 'FBtr0333825'] 2021-10-25 09:35:20.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034159: ['FBtr0300552'] 2021-10-25 09:35:20.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034159 has a single transcript. 2021-10-25 09:35:20.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:20.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034160: ['FBtr0087033', 'FBtr0308764'] 2021-10-25 09:35:20.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030480: ['FBtr0073775', 'FBtr0343147'] 2021-10-25 09:35:20.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10431419, 10431476), (10431888, 10431943), (10432178, 10432241)] 2021-10-25 09:35:20.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10142398, 10142493), (10142934, 10143362), (10142934, 10143467), (10143588, 10143643)] 2021-10-25 09:35:20.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16817221, 16817272), (16817221, 16817284)] 2021-10-25 09:35:20.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.861 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2747252, 2747310), (2748255, 2748319), (2748792, 2749211), (2748792, 2752994), (2748792, 2750078), (2748792, 2750913)] 2021-10-25 09:35:20.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050365: ['FBtr0088773', 'FBtr0339352'] 2021-10-25 09:35:20.861 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13385396, 13385499), (13385595, 13385660)] 2021-10-25 09:35:20.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.862 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004919: ['FBtr0072459', 'FBtr0300178', 'FBtr0300179', 'FBtr0306330'] 2021-10-25 09:35:20.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:20.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034162: ['FBtr0087042'] 2021-10-25 09:35:20.916 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034162 has a single transcript. 2021-10-25 09:35:20.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030481: ['FBtr0073776', 'FBtr0342624'] 2021-10-25 09:35:20.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034165: ['FBtr0087045'] 2021-10-25 09:35:20.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034165 has a single transcript. 2021-10-25 09:35:20.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034166: ['FBtr0340070'] 2021-10-25 09:35:20.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034166 has a single transcript. 2021-10-25 09:35:20.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034168: ['FBtr0087050'] 2021-10-25 09:35:20.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034168 has a single transcript. 2021-10-25 09:35:20.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034172: ['FBtr0087054'] 2021-10-25 09:35:20.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034172 has a single transcript. 2021-10-25 09:35:20.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037794: ['FBtr0082184'] 2021-10-25 09:35:20.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037794 has a single transcript. 2021-10-25 09:35:20.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034173: ['FBtr0087067'] 2021-10-25 09:35:20.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034173 has a single transcript. 2021-10-25 09:35:20.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034175: ['FBtr0087060'] 2021-10-25 09:35:20.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034175 has a single transcript. 2021-10-25 09:35:20.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:20.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:20.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050366: ['FBtr0088771', 'FBtr0113373'] 2021-10-25 09:35:20.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037796: ['FBtr0110786', 'FBtr0306090', 'FBtr0337018', 'FBtr0337019'] 2021-10-25 09:35:20.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034176: ['FBtr0087059'] 2021-10-25 09:35:20.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034176 has a single transcript. 2021-10-25 09:35:20.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25073214, 25073277), (25073589, 25074036), (25073589, 25075241), (25075338, 25075396), (25075548, 25075604), (25075722, 25077173), (25077306, 25077369), (25078006, 25083864)] 2021-10-25 09:35:20.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25072626, 25073589, 'FBtr0072459_exon_7') contains intron (25073214, 25073277) 2021-10-25 09:35:20.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072459_exon_7'] 2021-10-25 09:35:20.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:20.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034177: ['FBtr0087057'] 2021-10-25 09:35:20.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034177 has a single transcript. 2021-10-25 09:35:20.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034179: ['FBtr0086966', 'FBtr0306574'] 2021-10-25 09:35:21.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:21.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030482: ['FBtr0073777'] 2021-10-25 09:35:21.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030482 has a single transcript. 2021-10-25 09:35:21.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030483: ['FBtr0073788'] 2021-10-25 09:35:21.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030483 has a single transcript. 2021-10-25 09:35:21.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17006507, 17006788), (17007058, 17007132)] 2021-10-25 09:35:21.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17006788, 17007501, 'FBtr0086966_exon_2') contains intron (17007058, 17007132) 2021-10-25 09:35:21.036 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086966_exon_2'] 2021-10-25 09:35:21.036 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030484: ['FBtr0073778'] 2021-10-25 09:35:21.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030484 has a single transcript. 2021-10-25 09:35:21.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030485: ['FBtr0073787', 'FBtr0301560', 'FBtr0343148'] 2021-10-25 09:35:21.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263231: ['FBtr0081888', 'FBtr0334319'] 2021-10-25 09:35:21.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10171741, 10172282), (10172428, 10172581), (10172724, 10172785), (10172977, 10173038), (10173136, 10173353), (10173432, 10173497), (10173607, 10174711), (10174818, 10178674), (10174818, 10178689), (10178935, 10187945), (10188085, 10189499)] 2021-10-25 09:35:21.066 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10171155, 10172428, 'FBtr0110786_exon_10') contains intron (10171741, 10172282) 2021-10-25 09:35:21.066 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10171155, 10172428, 'FBtr0337018_exon_10') contains intron (10171741, 10172282) 2021-10-25 09:35:21.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110786_exon_10', 'FBtr0337018_exon_10'] 2021-10-25 09:35:21.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050369: ['FBtr0088795'] 2021-10-25 09:35:21.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050369 has a single transcript. 2021-10-25 09:35:21.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250907: ['FBtr0331165', 'FBtr0331166', 'FBtr0111127'] 2021-10-25 09:35:21.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050371: ['FBtr0088798'] 2021-10-25 09:35:21.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050371 has a single transcript. 2021-10-25 09:35:21.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050372: ['FBtr0100140', 'FBtr0300954', 'FBtr0339300'] 2021-10-25 09:35:21.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034180: ['FBtr0087019', 'FBtr0340073', 'FBtr0114627', 'FBtr0114628'] 2021-10-25 09:35:21.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8655906, 8655986), (8655906, 8655977), (8657843, 8658014), (8658387, 8659962)] 2021-10-25 09:35:21.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.111 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13409749, 13409813), (13410268, 13410341), (13410517, 13411351), (13411425, 13412261), (13412416, 13412486), (13412922, 13412981)] 2021-10-25 09:35:21.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004921: ['FBtr0088645', 'FBtr0088646', 'FBtr0088647'] 2021-10-25 09:35:21.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23000966, 23003746), (23003933, 23003990), (23005346, 23005406), (23005686, 23012217), (23012403, 23012455), (23015980, 23016037), (23016090, 23025169), (23016104, 23025169), (23025224, 23025696), (23025224, 23025854), (23025224, 23025288)] 2021-10-25 09:35:21.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8115463, 8115529), (8115715, 8116131), (8115715, 8115977), (8116025, 8116131), (8116208, 8116266), (8117020, 8117164), (8117104, 8117164), (8117284, 8117344), (8117825, 8117887), (8118323, 8118408), (8118851, 8118913), (8119254, 8119322), (8119468, 8119547), (8119620, 8122256)] 2021-10-25 09:35:21.162 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263232: ['FBtr0333073', 'FBtr0345389'] 2021-10-25 09:35:21.189 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8901431, 8902327), (8901522, 8902327), (8901522, 8902136)] 2021-10-25 09:35:21.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17008536, 17008596), (17008785, 17008845), (17008942, 17009500), (17008942, 17010052), (17010173, 17010262), (17010194, 17010262), (17010535, 17011153), (17010535, 17010886), (17010976, 17011153), (17011548, 17011613), (17011816, 17011951), (17012708, 17013284), (17012774, 17013284), (17013481, 17013545), (17013727, 17013788), (17013996, 17014948), (17015202, 17015658), (17015202, 17015693), (17015202, 17015662)] 2021-10-25 09:35:21.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13965392, 13965523), (13968702, 13968760), (13971100, 13971161), (13971317, 13971420)] 2021-10-25 09:35:21.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037797: ['FBtr0082222'] 2021-10-25 09:35:21.219 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037797 has a single transcript. 2021-10-25 09:35:21.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030486: ['FBtr0073779', 'FBtr0301559'] 2021-10-25 09:35:21.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037798: ['FBtr0110952'] 2021-10-25 09:35:21.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037798 has a single transcript. 2021-10-25 09:35:21.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037801: ['FBtr0082225', 'FBtr0337048'] 2021-10-25 09:35:21.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250908: ['FBtr0290328'] 2021-10-25 09:35:21.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250908 has a single transcript. 2021-10-25 09:35:21.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050373: ['FBtr0088806', 'FBtr0345936'] 2021-10-25 09:35:21.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13413248, 13413312), (13414895, 13415042), (13417519, 13417590), (13420304, 13420368), (13420531, 13420596)] 2021-10-25 09:35:21.264 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13413241, 13417519, 'FBtr0073779_exon_1') contains intron (13413248, 13413312) 2021-10-25 09:35:21.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073779_exon_1'] 2021-10-25 09:35:21.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.269 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263233: ['FBtr0340210', 'FBtr0112385'] 2021-10-25 09:35:21.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250910: ['FBtr0290334', 'FBtr0290335', 'FBtr0301944', 'FBtr0308597'] 2021-10-25 09:35:21.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10251756, 10251888), (10251967, 10252170), (10252697, 10252797), (10253531, 10253589), (10254919, 10254980)] 2021-10-25 09:35:21.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004924: ['FBtr0074005', 'FBtr0100294', 'FBtr0074006', 'FBtr0340434', 'FBtr0308699'] 2021-10-25 09:35:21.309 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8164506, 8164567), (8164707, 8164796)] 2021-10-25 09:35:21.310 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.310 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17456078, 17456137), (17456293, 17456372)] 2021-10-25 09:35:21.321 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030492: ['FBtr0073782'] 2021-10-25 09:35:21.331 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030492 has a single transcript. 2021-10-25 09:35:21.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030493: ['FBtr0073783'] 2021-10-25 09:35:21.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030493 has a single transcript. 2021-10-25 09:35:21.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037802: ['FBtr0305358'] 2021-10-25 09:35:21.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037802 has a single transcript. 2021-10-25 09:35:21.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030494: ['FBtr0073784'] 2021-10-25 09:35:21.349 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030494 has a single transcript. 2021-10-25 09:35:21.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037807: ['FBtr0082240', 'FBtr0337051'] 2021-10-25 09:35:21.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034181: ['FBtr0087016', 'FBtr0087017', 'FBtr0340126', 'FBtr0300573'] 2021-10-25 09:35:21.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030495: ['FBtr0073785', 'FBtr0332297', 'FBtr0332298', 'FBtr0331736'] 2021-10-25 09:35:21.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050374: ['FBtr0303310'] 2021-10-25 09:35:21.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050374 has a single transcript. 2021-10-25 09:35:21.378 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12513023, 12513142), (12513219, 12519011), (12513251, 12516449), (12513251, 12518894), (12513251, 12515143), (12515557, 12516449), (12518319, 12518894), (12519072, 12519165), (12519441, 12520455), (12520656, 12521797), (12522659, 12547286), (12547704, 12547910)] 2021-10-25 09:35:21.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263234: ['FBtr0080334', 'FBtr0345717'] 2021-10-25 09:35:21.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050375: ['FBtr0088799'] 2021-10-25 09:35:21.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050375 has a single transcript. 2021-10-25 09:35:21.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050376: ['FBtr0088800'] 2021-10-25 09:35:21.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050376 has a single transcript. 2021-10-25 09:35:21.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10309117, 10309181), (10309698, 10309898), (10310518, 10311461)] 2021-10-25 09:35:21.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050377: ['FBtr0088844', 'FBtr0339121'] 2021-10-25 09:35:21.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15319807, 15321153), (15321032, 15321153), (15321371, 15321860), (15322827, 15322898), (15322975, 15324070), (15323785, 15324070), (15325200, 15325274), (15325525, 15325586), (15325738, 15325815)] 2021-10-25 09:35:21.405 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:21.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.428 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037809: ['FBtr0082230'] 2021-10-25 09:35:21.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037809 has a single transcript. 2021-10-25 09:35:21.451 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17017799, 17018062), (17018266, 17018383), (17018925, 17019206), (17019321, 17019432), (17019349, 17019432)] 2021-10-25 09:35:21.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17018062, 17018925, 'FBtr0087016_exon_3') contains intron (17018266, 17018383) 2021-10-25 09:35:21.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17018062, 17018925, 'FBtr0087017_exon_2') contains intron (17018266, 17018383) 2021-10-25 09:35:21.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17019206, 17019522, 'FBtr0087017_exon_1') contains intron (17019321, 17019432) 2021-10-25 09:35:21.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17019206, 17019522, 'FBtr0340126_exon_1') contains intron (17019321, 17019432) 2021-10-25 09:35:21.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17018062, 17018925, 'FBtr0300573_exon_3') contains intron (17018266, 17018383) 2021-10-25 09:35:21.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087016_exon_3', 'FBtr0087017_exon_2', 'FBtr0087017_exon_1', 'FBtr0340126_exon_1', 'FBtr0300573_exon_3'] 2021-10-25 09:35:21.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7890158, 7890822), (7890930, 7900946), (7901440, 7905442), (7907444, 7914356)] 2021-10-25 09:35:21.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7890024, 7890930, 'FBtr0339121_exon_1') contains intron (7890158, 7890822) 2021-10-25 09:35:21.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339121_exon_1'] 2021-10-25 09:35:21.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.454 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13553000, 13553091), (13553264, 13553410), (13554266, 13555313)] 2021-10-25 09:35:21.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13552799, 13553264, 'FBtr0073785_exon_2') contains intron (13553000, 13553091) 2021-10-25 09:35:21.455 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13552799, 13553264, 'FBtr0332297_exon_3') contains intron (13553000, 13553091) 2021-10-25 09:35:21.455 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073785_exon_2', 'FBtr0332297_exon_3'] 2021-10-25 09:35:21.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037810: ['FBtr0082231', 'FBtr0082232'] 2021-10-25 09:35:21.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263235: ['FBtr0302854', 'FBtr0345718'] 2021-10-25 09:35:21.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10333313, 10333496), (10333583, 10333650), (10337159, 10337221), (10337443, 10337507)] 2021-10-25 09:35:21.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050378: ['FBtr0088854'] 2021-10-25 09:35:21.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050378 has a single transcript. 2021-10-25 09:35:21.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050379: ['FBtr0305125'] 2021-10-25 09:35:21.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050379 has a single transcript. 2021-10-25 09:35:21.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050380: ['FBtr0088881'] 2021-10-25 09:35:21.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050380 has a single transcript. 2021-10-25 09:35:21.528 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:21.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.530 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050381: ['FBtr0113374', 'FBtr0339129'] 2021-10-25 09:35:21.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0250911: ['FBtr0290341'] 2021-10-25 09:35:21.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0250911 has a single transcript. 2021-10-25 09:35:21.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037811: ['FBtr0082233'] 2021-10-25 09:35:21.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037811 has a single transcript. 2021-10-25 09:35:21.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259098: ['FBtr0299508', 'FBtr0343327'] 2021-10-25 09:35:21.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037812: ['FBtr0082234'] 2021-10-25 09:35:21.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037812 has a single transcript. 2021-10-25 09:35:21.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037814: ['FBtr0082260'] 2021-10-25 09:35:21.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037814 has a single transcript. 2021-10-25 09:35:21.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037815: ['FBtr0082248'] 2021-10-25 09:35:21.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037815 has a single transcript. 2021-10-25 09:35:21.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7930389, 7930451), (7930600, 7930659), (7930792, 7930853), (7930810, 7930853)] 2021-10-25 09:35:21.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037816: ['FBtr0082258'] 2021-10-25 09:35:21.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037816 has a single transcript. 2021-10-25 09:35:21.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037817: ['FBtr0301283'] 2021-10-25 09:35:21.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037817 has a single transcript. 2021-10-25 09:35:21.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004926: ['FBtr0075968'] 2021-10-25 09:35:21.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0004926 has a single transcript. 2021-10-25 09:35:21.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263236: ['FBtr0085400', 'FBtr0085399', 'FBtr0085398', 'FBtr0334868', 'FBtr0345203'] 2021-10-25 09:35:21.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037818: ['FBtr0082323'] 2021-10-25 09:35:21.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037818 has a single transcript. 2021-10-25 09:35:21.603 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7411714, 7411776)] 2021-10-25 09:35:21.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.604 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037819: ['FBtr0113215'] 2021-10-25 09:35:21.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004956: ['FBtr0074581', 'FBtr0112847', 'FBtr0343592'] 2021-10-25 09:35:21.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037819 has a single transcript. 2021-10-25 09:35:21.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037822: ['FBtr0082267'] 2021-10-25 09:35:21.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037822 has a single transcript. 2021-10-25 09:35:21.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030499: ['FBtr0073805', 'FBtr0345128'] 2021-10-25 09:35:21.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037824: ['FBtr0082268'] 2021-10-25 09:35:21.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034182: ['FBtr0086972', 'FBtr0331984'] 2021-10-25 09:35:21.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037824 has a single transcript. 2021-10-25 09:35:21.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037826: ['FBtr0082317'] 2021-10-25 09:35:21.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037826 has a single transcript. 2021-10-25 09:35:21.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037827: ['FBtr0082269'] 2021-10-25 09:35:21.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037827 has a single transcript. 2021-10-25 09:35:21.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050382: ['FBtr0088894', 'FBtr0302223'] 2021-10-25 09:35:21.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037828: ['FBtr0082316'] 2021-10-25 09:35:21.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037828 has a single transcript. 2021-10-25 09:35:21.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037829: ['FBtr0082313', 'FBtr0082314', 'FBtr0335208'] 2021-10-25 09:35:21.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259099: ['FBtr0331181', 'FBtr0299509', 'FBtr0299510', 'FBtr0330139'] 2021-10-25 09:35:21.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13605771, 13605998), (13607474, 13607682), (13608084, 13608151), (13608332, 13608400)] 2021-10-25 09:35:21.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.669 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18306828, 18307017), (18307167, 18307242), (18307736, 18308808), (18307739, 18308808)] 2021-10-25 09:35:21.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17044897, 17044961), (17045030, 17045081), (17046345, 17046402)] 2021-10-25 09:35:21.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7830992, 7831280), (7831457, 7831519), (7831619, 7831743), (7831619, 7831676)] 2021-10-25 09:35:21.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29245318, 29245382), (29245903, 29246174), (29246724, 29246783), (29247641, 29247702), (29247858, 29247921), (29248414, 29250361), (29248414, 29250189), (29248414, 29248859), (29248414, 29249209), (29248414, 29248682), (29249504, 29250361)] 2021-10-25 09:35:21.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.716 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030500: ['FBtr0073850'] 2021-10-25 09:35:21.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030500 has a single transcript. 2021-10-25 09:35:21.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10753453, 10753517), (10753645, 10753698), (10753821, 10754032), (10753858, 10754032), (10754107, 10754168), (10754147, 10754209), (10754147, 10754205), (10754366, 10754419), (10754619, 10754687), (10754869, 10754927), (10755106, 10755170)] 2021-10-25 09:35:21.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034183: ['FBtr0086973'] 2021-10-25 09:35:21.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034183 has a single transcript. 2021-10-25 09:35:21.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030501: ['FBtr0073806'] 2021-10-25 09:35:21.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030501 has a single transcript. 2021-10-25 09:35:21.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050383: ['FBtr0088897'] 2021-10-25 09:35:21.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050383 has a single transcript. 2021-10-25 09:35:21.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050384: ['FBtr0089048'] 2021-10-25 09:35:21.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050384 has a single transcript. 2021-10-25 09:35:21.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030502: ['FBtr0073849', 'FBtr0346118'] 2021-10-25 09:35:21.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034184: ['FBtr0086974', 'FBtr0340125'] 2021-10-25 09:35:21.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050385: ['FBtr0089047'] 2021-10-25 09:35:21.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050385 has a single transcript. 2021-10-25 09:35:21.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14904980, 14931724), (14921891, 14931724), (14926670, 14931724), (14931919, 14939010), (14939127, 14939407), (14939796, 14939856), (14940006, 14940123), (14940295, 14940356), (14940452, 14940516), (14940915, 14940999), (14941417, 14941506), (14941903, 14942024)] 2021-10-25 09:35:21.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004957: ['FBtr0074577', 'FBtr0310487', 'FBtr0333247'] 2021-10-25 09:35:21.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050389: ['FBtr0071632', 'FBtr0071633', 'FBtr0330235', 'FBtr0330236', 'FBtr0310423'] 2021-10-25 09:35:21.783 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331181': ['FBtr0299509']} 2021-10-25 09:35:21.783 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0299509']] 2021-10-25 09:35:21.797 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13615419, 13615675)] 2021-10-25 09:35:21.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17049427, 17050008), (17050175, 17050232), (17050655, 17050716), (17051164, 17051821), (17051164, 17053268), (17053144, 17053268), (17053418, 17053484)] 2021-10-25 09:35:21.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18378049, 18378126)] 2021-10-25 09:35:21.833 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18377520, 18379851, 'FBtr0074577_exon_1') contains intron (18378049, 18378126) 2021-10-25 09:35:21.833 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18378003, 18379851, 'FBtr0310487_exon_1') contains intron (18378049, 18378126) 2021-10-25 09:35:21.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074577_exon_1', 'FBtr0310487_exon_1'] 2021-10-25 09:35:21.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037831: ['FBtr0082273', 'FBtr0302571', 'FBtr0301310', 'FBtr0301311'] 2021-10-25 09:35:21.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030503: ['FBtr0073807', 'FBtr0308644', 'FBtr0340395', 'FBtr0331722'] 2021-10-25 09:35:21.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034186: ['FBtr0087013', 'FBtr0306810'] 2021-10-25 09:35:21.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259101: ['FBtr0299513', 'FBtr0299514', 'FBtr0332384'] 2021-10-25 09:35:21.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21149945, 21150008), (21150201, 21150264), (21150923, 21150982), (21151084, 21153884), (21154166, 21154543), (21154166, 21154714), (21155337, 21155403), (21155530, 21155604), (21155731, 21155792), (21155937, 21156863), (21157297, 21160096), (21157297, 21157916), (21157297, 21160428)] 2021-10-25 09:35:21.892 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17060801, 17060857)] 2021-10-25 09:35:21.901 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.902 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.911 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071632': ['FBtr0330236']} 2021-10-25 09:35:21.912 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330236']] 2021-10-25 09:35:21.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263237: ['FBtr0070756'] 2021-10-25 09:35:21.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263237 has a single transcript. 2021-10-25 09:35:21.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263239: ['FBtr0113134'] 2021-10-25 09:35:21.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263239 has a single transcript. 2021-10-25 09:35:21.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13617106, 13617177), (13617220, 13617369), (13617575, 13617813), (13617936, 13618272), (13617936, 13618101), (13618402, 13618596)] 2021-10-25 09:35:21.934 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13616988, 13617575, 'FBtr0073807_exon_1') contains intron (13617106, 13617177) 2021-10-25 09:35:21.934 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13617177, 13617575, 'FBtr0308644_exon_2') contains intron (13617220, 13617369) 2021-10-25 09:35:21.935 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13616988, 13617575, 'FBtr0340395_exon_1') contains intron (13617106, 13617177) 2021-10-25 09:35:21.935 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13616988, 13617220, 'FBtr0331722_exon_1') contains intron (13617106, 13617177) 2021-10-25 09:35:21.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073807_exon_1', 'FBtr0308644_exon_2', 'FBtr0340395_exon_1', 'FBtr0331722_exon_1'] 2021-10-25 09:35:21.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0004959: ['FBtr0074603', 'FBtr0342846'] 2021-10-25 09:35:21.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263240: ['FBtr0088984', 'FBtr0329876'] 2021-10-25 09:35:21.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10761616, 10761843), (10762025, 10762246), (10762449, 10763028), (10763951, 10764149), (10763951, 10764113), (10763951, 10764110), (10764373, 10764442), (10764578, 10764635), (10765198, 10765249), (10765444, 10765513), (10765559, 10766027), (10766128, 10766468)] 2021-10-25 09:35:21.950 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10765513, 10766756, 'FBtr0302571_exon_9') contains intron (10765559, 10766027) 2021-10-25 09:35:21.950 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10765513, 10766756, 'FBtr0301310_exon_9') contains intron (10765559, 10766027) 2021-10-25 09:35:21.950 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10765513, 10766756, 'FBtr0301311_exon_9') contains intron (10765559, 10766027) 2021-10-25 09:35:21.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302571_exon_9', 'FBtr0301310_exon_9', 'FBtr0301311_exon_9'] 2021-10-25 09:35:21.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034187: ['FBtr0300276', 'FBtr0300277'] 2021-10-25 09:35:21.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11096305, 11103437), (11103084, 11103443), (11103615, 11103828), (11104054, 11104112), (11104310, 11104374), (11104777, 11107190), (11104777, 11105151), (11105309, 11105363), (11105460, 11106494), (11106849, 11106918), (11107348, 11107406), (11107506, 11107568), (11107920, 11107978)] 2021-10-25 09:35:21.976 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7491881, 7491945)] 2021-10-25 09:35:21.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.982 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:21.984 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18686343, 18686429), (18686578, 18686957)] 2021-10-25 09:35:21.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:21.985 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17062906, 17062963), (17063106, 17063170), (17064015, 17064256)] 2021-10-25 09:35:22.011 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17062963, 17064015, 'FBtr0300277_exon_2') contains intron (17063106, 17063170) 2021-10-25 09:35:22.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300277_exon_2'] 2021-10-25 09:35:22.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263241: ['FBtr0076204', 'FBtr0076205'] 2021-10-25 09:35:22.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005198: ['FBtr0074819', 'FBtr0332690'] 2021-10-25 09:35:22.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050390: ['FBtr0071617', 'FBtr0342888'] 2021-10-25 09:35:22.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034191: ['FBtr0086979'] 2021-10-25 09:35:22.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034191 has a single transcript. 2021-10-25 09:35:22.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030504: ['FBtr0073848', 'FBtr0340191'] 2021-10-25 09:35:22.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034194: ['FBtr0086981', 'FBtr0086982'] 2021-10-25 09:35:22.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259108: ['FBtr0112628', 'FBtr0307597', 'FBtr0307598'] 2021-10-25 09:35:22.102 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11070985, 11071050), (11071129, 11071558), (11072410, 11072469), (11072410, 11072561)] 2021-10-25 09:35:22.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20129363, 20129424), (20129555, 20129620), (20129872, 20129931), (20130068, 20130125), (20130300, 20133502), (20133709, 20133763), (20134678, 20134747), (20135354, 20135420), (20135620, 20135686), (20135620, 20135677), (20135934, 20135994), (20138068, 20138129), (20138273, 20138378), (20138549, 20138604), (20138700, 20138764)] 2021-10-25 09:35:22.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.107 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21292757, 21292826), (21292984, 21293036), (21293265, 21293320), (21293414, 21293496)] 2021-10-25 09:35:22.107 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.107 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037832: ['FBtr0082274'] 2021-10-25 09:35:22.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037832 has a single transcript. 2021-10-25 09:35:22.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037834: ['FBtr0082304'] 2021-10-25 09:35:22.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037834 has a single transcript. 2021-10-25 09:35:22.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13619665, 13619737), (13620272, 13620343), (13620534, 13620592), (13620855, 13620923), (13621356, 13621418), (13621553, 13621618), (13622500, 13622559), (13623470, 13623546), (13624106, 13624163)] 2021-10-25 09:35:22.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17109276, 17110166), (17109276, 17109942), (17110074, 17110166), (17110500, 17113317), (17113404, 17113467), (17113572, 17113628), (17113760, 17113824)] 2021-10-25 09:35:22.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037835: ['FBtr0082280'] 2021-10-25 09:35:22.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037835 has a single transcript. 2021-10-25 09:35:22.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037836: ['FBtr0347183'] 2021-10-25 09:35:22.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037836 has a single transcript. 2021-10-25 09:35:22.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037837: ['FBtr0082301', 'FBtr0300078', 'FBtr0300079', 'FBtr0336710', 'FBtr0339140'] 2021-10-25 09:35:22.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050391: ['FBtr0071621'] 2021-10-25 09:35:22.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050391 has a single transcript. 2021-10-25 09:35:22.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263246: ['FBtr0308062'] 2021-10-25 09:35:22.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263246 has a single transcript. 2021-10-25 09:35:22.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050392: ['FBtr0071618', 'FBtr0342889'] 2021-10-25 09:35:22.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263247: ['FBtr0308059'] 2021-10-25 09:35:22.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263247 has a single transcript. 2021-10-25 09:35:22.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1410121, 1413417), (1411978, 1413417), (1414685, 1427675), (1427774, 1432742), (1432915, 1432974), (1433197, 1433253), (1433412, 1433475), (1447295, 1447363), (1448783, 1448846)] 2021-10-25 09:35:22.187 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005278: ['FBtr0089430', 'FBtr0089431', 'FBtr0089432', 'FBtr0089433', 'FBtr0089434', 'FBtr0089428', 'FBtr0089429', 'FBtr0089437', 'FBtr0089435', 'FBtr0089436', 'FBtr0308091', 'FBtr0330656'] 2021-10-25 09:35:22.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263248: ['FBtr0308058'] 2021-10-25 09:35:22.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263248 has a single transcript. 2021-10-25 09:35:22.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034195: ['FBtr0110777'] 2021-10-25 09:35:22.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034195 has a single transcript. 2021-10-25 09:35:22.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263249: ['FBtr0308060'] 2021-10-25 09:35:22.199 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263249 has a single transcript. 2021-10-25 09:35:22.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034196: ['FBtr0087002'] 2021-10-25 09:35:22.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034196 has a single transcript. 2021-10-25 09:35:22.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030505: ['FBtr0073808', 'FBtr0112980', 'FBtr0340396', 'FBtr0301449', 'FBtr0301450', 'FBtr0301451', 'FBtr0345127'] 2021-10-25 09:35:22.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263250: ['FBtr0308240'] 2021-10-25 09:35:22.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263250 has a single transcript. 2021-10-25 09:35:22.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034197: ['FBtr0086984', 'FBtr0340127'] 2021-10-25 09:35:22.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263251: ['FBtr0076348', 'FBtr0076351', 'FBtr0076352', 'FBtr0076350', 'FBtr0076349'] 2021-10-25 09:35:22.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21290970, 21291031), (21291581, 21291641), (21291859, 21291926)] 2021-10-25 09:35:22.234 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21290913, 21291581, 'FBtr0071618_exon_3') contains intron (21290970, 21291031) 2021-10-25 09:35:22.234 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071618_exon_3'] 2021-10-25 09:35:22.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.258 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17129051, 17129157), (17129882, 17129994)] 2021-10-25 09:35:22.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.271 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10812213, 10812313), (10812213, 10812797), (10812664, 10812797), (10813004, 10813059), (10813200, 10813464), (10813598, 10814253), (10813704, 10814253), (10814183, 10814253), (10814356, 10814414), (10814558, 10814612), (10814717, 10814776)] 2021-10-25 09:35:22.272 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.294 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050393: ['FBtr0071620'] 2021-10-25 09:35:22.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050393 has a single transcript. 2021-10-25 09:35:22.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050394: ['FBtr0071614', 'FBtr0071613'] 2021-10-25 09:35:22.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259110: ['FBtr0340310', 'FBtr0299534', 'FBtr0299535', 'FBtr0310306', 'FBtr0310307', 'FBtr0307540', 'FBtr0307541', 'FBtr0307542'] 2021-10-25 09:35:22.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034198: ['FBtr0086985', 'FBtr0345517'] 2021-10-25 09:35:22.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9972397, 9973093), (9972397, 9972880), (9972397, 9972921), (9973001, 9973093)] 2021-10-25 09:35:22.341 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9972755, 9974023, 'FBtr0076351_exon_1') contains intron (9973001, 9973093) 2021-10-25 09:35:22.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076351_exon_1'] 2021-10-25 09:35:22.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.347 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21321756, 21321811), (21321948, 21322008), (21322157, 21322217), (21322456, 21322507), (21323069, 21323165)] 2021-10-25 09:35:22.348 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21322507, 21323320, 'FBtr0071614_exon_1') contains intron (21323069, 21323165) 2021-10-25 09:35:22.348 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071614_exon_1'] 2021-10-25 09:35:22.349 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.352 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13625589, 13649376), (13642198, 13645177), (13645804, 13649376), (13649501, 13649654), (13650067, 13652878), (13650067, 13654783), (13653505, 13654783), (13655204, 13655302), (13655459, 13655527), (13655775, 13655850), (13656034, 13658107), (13656034, 13660739), (13658645, 13660739), (13662686, 13662754)] 2021-10-25 09:35:22.353 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13658107, 13661942, 'FBtr0301451_exon_8') contains intron (13658645, 13660739) 2021-10-25 09:35:22.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301451_exon_8'] 2021-10-25 09:35:22.354 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:22.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050395: ['FBtr0300226'] 2021-10-25 09:35:22.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050395 has a single transcript. 2021-10-25 09:35:22.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050398: ['FBtr0071710'] 2021-10-25 09:35:22.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050398 has a single transcript. 2021-10-25 09:35:22.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034199: ['FBtr0086986'] 2021-10-25 09:35:22.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034199 has a single transcript. 2021-10-25 09:35:22.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050401: ['FBtr0071731', 'FBtr0345794'] 2021-10-25 09:35:22.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034200: ['FBtr0086987', 'FBtr0345519'] 2021-10-25 09:35:22.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037838: ['FBtr0082281'] 2021-10-25 09:35:22.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037838 has a single transcript. 2021-10-25 09:35:22.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21986387, 21986442), (21986678, 21986748)] 2021-10-25 09:35:22.483 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21986442, 21986938, 'FBtr0071731_exon_1') contains intron (21986678, 21986748) 2021-10-25 09:35:22.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071731_exon_1'] 2021-10-25 09:35:22.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037841: ['FBtr0113216'] 2021-10-25 09:35:22.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037841 has a single transcript. 2021-10-25 09:35:22.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037842: ['FBtr0113217'] 2021-10-25 09:35:22.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037842 has a single transcript. 2021-10-25 09:35:22.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17137413, 17137490)] 2021-10-25 09:35:22.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(107000, 107764), (107838, 108587), (107956, 108587), (108101, 108587), (108226, 108587), (108346, 108587), (108809, 110405), (109793, 110405), (110483, 110754), (110877, 112689), (110877, 111004), (110877, 111906), (111117, 112689), (111117, 111906), (112019, 112689), (113369, 113433)] 2021-10-25 09:35:22.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (110754, 111337, 'FBtr0308091_exon_4') contains intron (110877, 111004) 2021-10-25 09:35:22.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308091_exon_4'] 2021-10-25 09:35:22.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037843: ['FBtr0082286', 'FBtr0302202'] 2021-10-25 09:35:22.515 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15948977, 15949519), (15948994, 15949519), (15949816, 15951149), (15949819, 15950354), (15949819, 15951149), (15949876, 15951149), (15949876, 15950354), (15950385, 15951149), (15951936, 15953872), (15953934, 15954285), (15954444, 15958451), (15954444, 15960806), (15954444, 15958490), (15958590, 15961985), (15960912, 15961985), (15962136, 15962273), (15962451, 15962535), (15962655, 15962763), (15962935, 15962992), (15963137, 15963205), (15963370, 15963473), (15963637, 15963790), (15963960, 15964035), (15964205, 15964268), (15964568, 15964647), (15964794, 15964926), (15964999, 15965070), (15965144, 15965216), (15965273, 15965384), (15965533, 15965597), (15965648, 15966468), (15967230, 15972204), (15972329, 15973112), (15972329, 15972812)] 2021-10-25 09:35:22.516 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15972204, 15973067, 'FBtr0340310_exon_1') contains intron (15972329, 15972812) 2021-10-25 09:35:22.519 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15972204, 15973067, 'FBtr0307541_exon_1') contains intron (15972329, 15972812) 2021-10-25 09:35:22.520 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340310_exon_1', 'FBtr0307541_exon_1'] 2021-10-25 09:35:22.520 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263256: ['FBtr0339672', 'FBtr0344862', 'FBtr0308298', 'FBtr0308299', 'FBtr0330321'] 2021-10-25 09:35:22.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10854596, 10854795), (10855032, 10855293)] 2021-10-25 09:35:22.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050403: ['FBtr0114523'] 2021-10-25 09:35:22.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050403 has a single transcript. 2021-10-25 09:35:22.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034201: ['FBtr0086989', 'FBtr0346643'] 2021-10-25 09:35:22.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050404: ['FBtr0071746', 'FBtr0071747', 'FBtr0342965'] 2021-10-25 09:35:22.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17154744, 17154838)] 2021-10-25 09:35:22.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037844: ['FBtr0082287'] 2021-10-25 09:35:22.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037844 has a single transcript. 2021-10-25 09:35:22.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037845: ['FBtr0082298'] 2021-10-25 09:35:22.614 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037845 has a single transcript. 2021-10-25 09:35:22.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037846: ['FBtr0082297'] 2021-10-25 09:35:22.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037846 has a single transcript. 2021-10-25 09:35:22.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21717696, 21719080), (21717696, 21717755), (21719683, 21719854)] 2021-10-25 09:35:22.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037848: ['FBtr0082288', 'FBtr0330150', 'FBtr0306640'] 2021-10-25 09:35:22.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030506: ['FBtr0073847'] 2021-10-25 09:35:22.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030506 has a single transcript. 2021-10-25 09:35:22.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8145973, 8152586), (8149473, 8152586), (8153742, 8153834), (8154052, 8154158), (8154311, 8154981), (8155111, 8157061), (8157256, 8157536), (8157948, 8158016), (8158179, 8158243)] 2021-10-25 09:35:22.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.651 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034202: ['FBtr0087000'] 2021-10-25 09:35:22.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034202 has a single transcript. 2021-10-25 09:35:22.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030507: ['FBtr0073809', 'FBtr0340397'] 2021-10-25 09:35:22.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034204: ['FBtr0086997', 'FBtr0329878'] 2021-10-25 09:35:22.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10869585, 10869642)] 2021-10-25 09:35:22.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13668447, 13668519)] 2021-10-25 09:35:22.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.712 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082288': ['FBtr0330150']} 2021-10-25 09:35:22.712 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330150']] 2021-10-25 09:35:22.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050406: ['FBtr0071736'] 2021-10-25 09:35:22.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050406 has a single transcript. 2021-10-25 09:35:22.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17166381, 17166452)] 2021-10-25 09:35:22.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050407: ['FBtr0071737'] 2021-10-25 09:35:22.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050407 has a single transcript. 2021-10-25 09:35:22.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050409: ['FBtr0445664', 'FBtr0445665'] 2021-10-25 09:35:22.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030508: ['FBtr0073810', 'FBtr0332888', 'FBtr0340398'] 2021-10-25 09:35:22.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037849: ['FBtr0082289'] 2021-10-25 09:35:22.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037849 has a single transcript. 2021-10-25 09:35:22.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23354479, 23354560), (23354969, 23355025)] 2021-10-25 09:35:22.777 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23354366, 23354969, 'FBtr0445664_exon_1') contains intron (23354479, 23354560) 2021-10-25 09:35:22.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445664_exon_1'] 2021-10-25 09:35:22.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034205: ['FBtr0086990'] 2021-10-25 09:35:22.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034205 has a single transcript. 2021-10-25 09:35:22.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037850: ['FBtr0082335'] 2021-10-25 09:35:22.781 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037850 has a single transcript. 2021-10-25 09:35:22.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037852: ['FBtr0082333', 'FBtr0082334'] 2021-10-25 09:35:22.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034206: ['FBtr0086996'] 2021-10-25 09:35:22.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034206 has a single transcript. 2021-10-25 09:35:22.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034210: ['FBtr0086964', 'FBtr0340144'] 2021-10-25 09:35:22.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13669744, 13670128), (13669744, 13670131), (13670649, 13671300), (13671446, 13672235), (13672428, 13672486), (13672579, 13673095), (13673180, 13673244)] 2021-10-25 09:35:22.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050410: ['FBtr0305675', 'FBtr0301852'] 2021-10-25 09:35:22.841 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13672486, 13673180, 'FBtr0332888_exon_5') contains intron (13672579, 13673095) 2021-10-25 09:35:22.841 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13672486, 13673180, 'FBtr0340398_exon_5') contains intron (13672579, 13673095) 2021-10-25 09:35:22.841 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10881106, 10881562), (10881803, 10881902)] 2021-10-25 09:35:22.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332888_exon_5', 'FBtr0340398_exon_5'] 2021-10-25 09:35:22.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.842 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10881562, 10882188, 'FBtr0082333_exon_1') contains intron (10881803, 10881902) 2021-10-25 09:35:22.842 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082333_exon_1'] 2021-10-25 09:35:22.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263257: ['FBtr0345071', 'FBtr0345072', 'FBtr0308308', 'FBtr0308309', 'FBtr0308310'] 2021-10-25 09:35:22.866 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17405983, 17406036), (17406801, 17406874), (17407055, 17407240)] 2021-10-25 09:35:22.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:22.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259111: ['FBtr0299537', 'FBtr0299538', 'FBtr0299539', 'FBtr0331658', 'FBtr0331659', 'FBtr0331660', 'FBtr0331661', 'FBtr0331662', 'FBtr0331663', 'FBtr0331664'] 2021-10-25 09:35:22.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037853: ['FBtr0082332'] 2021-10-25 09:35:22.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037853 has a single transcript. 2021-10-25 09:35:22.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037855: ['FBtr0082329', 'FBtr0302935'] 2021-10-25 09:35:22.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034214: ['FBtr0086961'] 2021-10-25 09:35:22.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034214 has a single transcript. 2021-10-25 09:35:22.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034215: ['FBtr0086916', 'FBtr0329993', 'FBtr0345803'] 2021-10-25 09:35:22.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050411: ['FBtr0072016'] 2021-10-25 09:35:22.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050411 has a single transcript. 2021-10-25 09:35:22.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030509: ['FBtr0073811'] 2021-10-25 09:35:22.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030509 has a single transcript. 2021-10-25 09:35:22.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050412: ['FBtr0072043', 'FBtr0072044', 'FBtr0343206'] 2021-10-25 09:35:22.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030510: ['FBtr0073846', 'FBtr0340399', 'FBtr0346119'] 2021-10-25 09:35:22.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15390499, 15390566), (15390907, 15392369), (15393001, 15393061), (15394455, 15394984), (15395107, 15396398), (15395191, 15396398), (15396618, 15396713), (15397055, 15397174), (15397575, 15397643), (15397797, 15398262), (15397797, 15398457), (15398346, 15398457), (15398588, 15398740), (15398893, 15398955), (15399096, 15399212), (15399320, 15400267), (15400471, 15400678), (15400814, 15403583), (15400814, 15410831), (15403628, 15410831), (15408573, 15410831), (15411103, 15419962), (15421628, 15440516)] 2021-10-25 09:35:22.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10890845, 10890999), (10890845, 10891093), (10891011, 10891093), (10891391, 10891513), (10891980, 10892084), (10892303, 10892362), (10892574, 10892639), (10892851, 10892914)] 2021-10-25 09:35:22.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.971 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:22.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:22.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005322: ['FBtr0080065', 'FBtr0343611', 'FBtr0343612'] 2021-10-25 09:35:23.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17428093, 17428163), (17428943, 17429002)] 2021-10-25 09:35:23.017 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23319016, 23319113), (23319025, 23319113)] 2021-10-25 09:35:23.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23318188, 23319348, 'FBtr0072043_exon_1') contains intron (23319016, 23319113) 2021-10-25 09:35:23.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072043_exon_1'] 2021-10-25 09:35:23.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.025 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13678753, 13678854), (13679301, 13679895)] 2021-10-25 09:35:23.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.027 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037856: ['FBtr0082325'] 2021-10-25 09:35:23.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037856 has a single transcript. 2021-10-25 09:35:23.028 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086916': ['FBtr0329993']} 2021-10-25 09:35:23.029 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329993']] 2021-10-25 09:35:23.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037857: ['FBtr0082326'] 2021-10-25 09:35:23.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037857 has a single transcript. 2021-10-25 09:35:23.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037860: ['FBtr0082380'] 2021-10-25 09:35:23.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037860 has a single transcript. 2021-10-25 09:35:23.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10303598, 10303654), (10303598, 10303782)] 2021-10-25 09:35:23.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037862: ['FBtr0082336'] 2021-10-25 09:35:23.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037862 has a single transcript. 2021-10-25 09:35:23.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037870: ['FBtr0082341'] 2021-10-25 09:35:23.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037870 has a single transcript. 2021-10-25 09:35:23.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037873: ['FBtr0082372', 'FBtr0335221'] 2021-10-25 09:35:23.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034217: ['FBtr0086917'] 2021-10-25 09:35:23.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034217 has a single transcript. 2021-10-25 09:35:23.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034218: ['FBtr0086918'] 2021-10-25 09:35:23.096 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034218 has a single transcript. 2021-10-25 09:35:23.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034219: ['FBtr0086957'] 2021-10-25 09:35:23.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034219 has a single transcript. 2021-10-25 09:35:23.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034221: ['FBtr0086919'] 2021-10-25 09:35:23.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034221 has a single transcript. 2021-10-25 09:35:23.113 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11209740, 11209797)] 2021-10-25 09:35:23.114 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.114 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034223: ['FBtr0086954'] 2021-10-25 09:35:23.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034223 has a single transcript. 2021-10-25 09:35:23.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030511: ['FBtr0073812'] 2021-10-25 09:35:23.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030511 has a single transcript. 2021-10-25 09:35:23.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050413: ['FBtr0072040'] 2021-10-25 09:35:23.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050413 has a single transcript. 2021-10-25 09:35:23.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034224: ['FBtr0086953', 'FBtr0345651'] 2021-10-25 09:35:23.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030512: ['FBtr0073844', 'FBtr0073845', 'FBtr0343352'] 2021-10-25 09:35:23.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050414: ['FBtr0302316', 'FBtr0343204'] 2021-10-25 09:35:23.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005355: ['FBtr0082665'] 2021-10-25 09:35:23.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005355 has a single transcript. 2021-10-25 09:35:23.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7223697, 7225605), (7223697, 7227103), (7225061, 7225605), (7225856, 7227103), (7227346, 7228699), (7229012, 7229095), (7229598, 7229652), (7230598, 7230888), (7231126, 7233680), (7231126, 7231812), (7231126, 7234203), (7231126, 7234526), (7231183, 7231812), (7231183, 7234526), (7231980, 7234526), (7233806, 7234526), (7234341, 7234526), (7234997, 7237686), (7234997, 7236144), (7236351, 7237686), (7237790, 7248828), (7237790, 7240181), (7237790, 7244973), (7245083, 7245286)] 2021-10-25 09:35:23.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005386: ['FBtr0306009', 'FBtr0306010'] 2021-10-25 09:35:23.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037874: ['FBtr0082344', 'FBtr0347181'] 2021-10-25 09:35:23.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:23.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263258: ['FBtr0340634', 'FBtr0340635', 'FBtr0340636', 'FBtr0074478', 'FBtr0074477'] 2021-10-25 09:35:23.194 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23384646, 23384701), (23384949, 23385004), (23385047, 23385112)] 2021-10-25 09:35:23.195 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13686502, 13686568), (13688002, 13688071), (13688161, 13688257), (13688571, 13701096), (13701353, 13718010), (13701353, 13707595), (13701353, 13718128), (13707714, 13718128)] 2021-10-25 09:35:23.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19591481, 19591551), (19591758, 19591817), (19593287, 19593350), (19598093, 19598155), (19598256, 19598370), (19598256, 19598385)] 2021-10-25 09:35:23.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.223 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:23.224 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034225: ['FBtr0086926', 'FBtr0340209'] 2021-10-25 09:35:23.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050416: ['FBtr0343205', 'FBtr0300955'] 2021-10-25 09:35:23.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005390: ['FBtr0070892'] 2021-10-25 09:35:23.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17478269, 17478388), (17478508, 17479816), (17479179, 17479816), (17480059, 17480116), (17480267, 17480331), (17480588, 17480650), (17480945, 17481015), (17481313, 17481374)] 2021-10-25 09:35:23.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005390 has a single transcript. 2021-10-25 09:35:23.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.287 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037875: ['FBtr0082371'] 2021-10-25 09:35:23.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037875 has a single transcript. 2021-10-25 09:35:23.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23322064, 23322140), (23322073, 23322140)] 2021-10-25 09:35:23.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17674214, 17674278), (17674938, 17675311), (17676557, 17676980), (17677503, 17681292), (17677503, 17684114), (17677503, 17682426), (17681829, 17682426), (17684393, 17684512), (17684682, 17689224), (17689306, 17695435), (17690209, 17694261), (17695500, 17695567), (17695614, 17698384), (17695614, 17698402)] 2021-10-25 09:35:23.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005391: ['FBtr0071424', 'FBtr0339648'] 2021-10-25 09:35:23.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037876: ['FBtr0113221'] 2021-10-25 09:35:23.302 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17695435, 17695614, 'FBtr0074477_exon_2') contains intron (17695500, 17695567) 2021-10-25 09:35:23.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074477_exon_2'] 2021-10-25 09:35:23.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037876 has a single transcript. 2021-10-25 09:35:23.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030514: ['FBtr0073843'] 2021-10-25 09:35:23.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030514 has a single transcript. 2021-10-25 09:35:23.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037877: ['FBtr0082368'] 2021-10-25 09:35:23.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037877 has a single transcript. 2021-10-25 09:35:23.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030518: ['FBtr0073818', 'FBtr0331708'] 2021-10-25 09:35:23.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037878: ['FBtr0082367', 'FBtr0336784'] 2021-10-25 09:35:23.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10052280, 10052348)] 2021-10-25 09:35:23.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034229: ['FBtr0086933', 'FBtr0086934', 'FBtr0086935', 'FBtr0086937'] 2021-10-25 09:35:23.358 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13737988, 13738173), (13738376, 13738439), (13738910, 13738985)] 2021-10-25 09:35:23.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050417: ['FBtr0072041'] 2021-10-25 09:35:23.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050417 has a single transcript. 2021-10-25 09:35:23.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:23.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050418: ['FBtr0072263'] 2021-10-25 09:35:23.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050418 has a single transcript. 2021-10-25 09:35:23.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050419: ['FBtr0072275'] 2021-10-25 09:35:23.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050419 has a single transcript. 2021-10-25 09:35:23.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050421: ['FBtr0072369', 'FBtr0343494', 'FBtr0343495'] 2021-10-25 09:35:23.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005411: ['FBtr0074234', 'FBtr0307176', 'FBtr0307177', 'FBtr0307178'] 2021-10-25 09:35:23.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030519: ['FBtr0073819', 'FBtr0331719'] 2021-10-25 09:35:23.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037879: ['FBtr0082351', 'FBtr0346098'] 2021-10-25 09:35:23.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17511544, 17512451), (17512263, 17512451), (17512263, 17512456), (17512715, 17512775), (17512984, 17513049)] 2021-10-25 09:35:23.432 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17512229, 17512715, 'FBtr0086935_exon_1') contains intron (17512263, 17512451) 2021-10-25 09:35:23.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086935_exon_1'] 2021-10-25 09:35:23.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13739860, 13739948), (13740112, 13740677), (13741143, 13741683)] 2021-10-25 09:35:23.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13739781, 13740112, 'FBtr0331719_exon_1') contains intron (13739860, 13739948) 2021-10-25 09:35:23.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331719_exon_1'] 2021-10-25 09:35:23.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24744839, 24751299), (24744839, 24752670), (24751383, 24752670), (24752910, 24752965), (24753235, 24753312), (24755125, 24755185), (24755973, 24756037)] 2021-10-25 09:35:23.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11225649, 11225702)] 2021-10-25 09:35:23.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263260: ['FBtr0088433'] 2021-10-25 09:35:23.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263260 has a single transcript. 2021-10-25 09:35:23.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16357217, 16357294), (16357417, 16357483), (16357572, 16357642), (16358206, 16358407), (16358206, 16358605), (16358206, 16358810)] 2021-10-25 09:35:23.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263270: ['FBtr0308492'] 2021-10-25 09:35:23.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263270 has a single transcript. 2021-10-25 09:35:23.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037880: ['FBtr0082352'] 2021-10-25 09:35:23.513 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037880 has a single transcript. 2021-10-25 09:35:23.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263271: ['FBtr0308493', 'FBtr0308494'] 2021-10-25 09:35:23.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030520: ['FBtr0073840', 'FBtr0112981', 'FBtr0331711', 'FBtr0331712'] 2021-10-25 09:35:23.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037881: ['FBtr0082366'] 2021-10-25 09:35:23.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037881 has a single transcript. 2021-10-25 09:35:23.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037882: ['FBtr0082365'] 2021-10-25 09:35:23.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037882 has a single transcript. 2021-10-25 09:35:23.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037883: ['FBtr0082353'] 2021-10-25 09:35:23.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037883 has a single transcript. 2021-10-25 09:35:23.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037884: ['FBtr0082364'] 2021-10-25 09:35:23.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037884 has a single transcript. 2021-10-25 09:35:23.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037885: ['FBtr0082354', 'FBtr0304707', 'FBtr0304708'] 2021-10-25 09:35:23.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050423: ['FBtr0346609'] 2021-10-25 09:35:23.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050423 has a single transcript. 2021-10-25 09:35:23.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050424: ['FBtr0113375', 'FBtr0113376', 'FBtr0113377', 'FBtr0343511'] 2021-10-25 09:35:23.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10355288, 10355500), (10355439, 10355500)] 2021-10-25 09:35:23.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.573 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034230: ['FBtr0086938', 'FBtr0086939', 'FBtr0340216'] 2021-10-25 09:35:23.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13746848, 13750315), (13750455, 13750585), (13752022, 13754829), (13752027, 13755252), (13752027, 13754829), (13755061, 13755252)] 2021-10-25 09:35:23.607 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13754829, 13755406, 'FBtr0073840_exon_1') contains intron (13755061, 13755252) 2021-10-25 09:35:23.607 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13754829, 13755406, 'FBtr0331711_exon_1') contains intron (13755061, 13755252) 2021-10-25 09:35:23.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073840_exon_1', 'FBtr0331711_exon_1'] 2021-10-25 09:35:23.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.622 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11235506, 11235600), (11235542, 11235600)] 2021-10-25 09:35:23.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263278: ['FBtr0079257'] 2021-10-25 09:35:23.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263278 has a single transcript. 2021-10-25 09:35:23.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259112: ['FBtr0347230', 'FBtr0347231', 'FBtr0347232'] 2021-10-25 09:35:23.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005427: ['FBtr0100582', 'FBtr0089442', 'FBtr0089441', 'FBtr0100577', 'FBtr0100578', 'FBtr0100579', 'FBtr0100580', 'FBtr0100581', 'FBtr0332976', 'FBtr0332977', 'FBtr0332978', 'FBtr0308208', 'FBtr0308209'] 2021-10-25 09:35:23.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17514416, 17514579), (17515529, 17515599), (17515529, 17515584), (17516322, 17516384), (17516528, 17516584), (17516790, 17516854)] 2021-10-25 09:35:23.654 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24965788, 24965845), (24966041, 24966105), (24966153, 24967050), (24966153, 24967146), (24966860, 24967050), (24967086, 24967146)] 2021-10-25 09:35:23.654 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17514216, 17515529, 'FBtr0086939_exon_1') contains intron (17514416, 17514579) 2021-10-25 09:35:23.654 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24967050, 24967157, 'FBtr0113376_exon_1') contains intron (24967086, 24967146) 2021-10-25 09:35:23.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086939_exon_1'] 2021-10-25 09:35:23.655 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24967050, 24967298, 'FBtr0113377_exon_1') contains intron (24967086, 24967146) 2021-10-25 09:35:23.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113376_exon_1', 'FBtr0113377_exon_1'] 2021-10-25 09:35:23.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263289: ['FBtr0308620', 'FBtr0308621', 'FBtr0308622', 'FBtr0308623', 'FBtr0308624', 'FBtr0308625', 'FBtr0308626', 'FBtr0308627', 'FBtr0308628', 'FBtr0308629', 'FBtr0308630', 'FBtr0308631', 'FBtr0308632', 'FBtr0308633', 'FBtr0308634', 'FBtr0335520', 'FBtr0335521', 'FBtr0335522'] 2021-10-25 09:35:23.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14770323, 14770384), (14770973, 14771237)] 2021-10-25 09:35:23.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.726 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037888: ['FBtr0082362'] 2021-10-25 09:35:23.726 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037888 has a single transcript. 2021-10-25 09:35:23.733 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037889: ['FBtr0082357'] 2021-10-25 09:35:23.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037889 has a single transcript. 2021-10-25 09:35:23.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037890: ['FBtr0082360', 'FBtr0082361', 'FBtr0308073'] 2021-10-25 09:35:23.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030521: ['FBtr0073838', 'FBtr0346091'] 2021-10-25 09:35:23.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034231: ['FBtr0086951'] 2021-10-25 09:35:23.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034231 has a single transcript. 2021-10-25 09:35:23.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034232: ['FBtr0086940'] 2021-10-25 09:35:23.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034232 has a single transcript. 2021-10-25 09:35:23.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034237: ['FBtr0086941', 'FBtr0086942'] 2021-10-25 09:35:23.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050428: ['FBtr0072451', 'FBtr0343515'] 2021-10-25 09:35:23.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13780650, 13781158), (13781326, 13781472), (13781733, 13781809)] 2021-10-25 09:35:23.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259113: ['FBtr0084115'] 2021-10-25 09:35:23.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259113 has a single transcript. 2021-10-25 09:35:23.809 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11242563, 11242823), (11243013, 11243488), (11243013, 11243781)] 2021-10-25 09:35:23.809 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11242207, 11243013, 'FBtr0082361_exon_2') contains intron (11242563, 11242823) 2021-10-25 09:35:23.810 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11242207, 11243013, 'FBtr0308073_exon_2') contains intron (11242563, 11242823) 2021-10-25 09:35:23.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082361_exon_2', 'FBtr0308073_exon_2'] 2021-10-25 09:35:23.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259139: ['FBtr0089917', 'FBtr0089918', 'FBtr0089919'] 2021-10-25 09:35:23.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17536329, 17536454), (17536579, 17536695), (17537011, 17537069), (17538622, 17538693)] 2021-10-25 09:35:23.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25252170, 25253580), (25253440, 25253580), (25253761, 25253819), (25254078, 25254127)] 2021-10-25 09:35:23.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030522: ['FBtr0100218'] 2021-10-25 09:35:23.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030522 has a single transcript. 2021-10-25 09:35:23.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030524: ['FBtr0073837'] 2021-10-25 09:35:23.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030524 has a single transcript. 2021-10-25 09:35:23.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030525: ['FBtr0073836'] 2021-10-25 09:35:23.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030525 has a single transcript. 2021-10-25 09:35:23.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030528: ['FBtr0073827'] 2021-10-25 09:35:23.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030528 has a single transcript. 2021-10-25 09:35:23.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030529: ['FBtr0073835', 'FBtr0346089'] 2021-10-25 09:35:23.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034240: ['FBtr0086946', 'FBtr0113090', 'FBtr0340219', 'FBtr0340220'] 2021-10-25 09:35:23.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050429: ['FBtr0072450'] 2021-10-25 09:35:23.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050429 has a single transcript. 2021-10-25 09:35:23.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11815765, 11815840), (11816544, 11816611), (11816757, 11818005), (11816757, 11817193), (11817338, 11818005), (11818137, 11818572), (11818960, 11819017), (11818960, 11819210)] 2021-10-25 09:35:23.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050430: ['FBtr0072448', 'FBtr0343513'] 2021-10-25 09:35:23.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037891: ['FBtr0082358'] 2021-10-25 09:35:23.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037891 has a single transcript. 2021-10-25 09:35:23.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037892: ['FBtr0082384'] 2021-10-25 09:35:23.922 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037892 has a single transcript. 2021-10-25 09:35:23.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13813805, 13813874), (13813985, 13814376), (13814886, 13821924)] 2021-10-25 09:35:23.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037894: ['FBtr0082386', 'FBtr0346638'] 2021-10-25 09:35:23.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25129536, 25129592)] 2021-10-25 09:35:23.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.948 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.964 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(269366, 271087), (269366, 269430), (269468, 271087), (271209, 271289), (271425, 271487), (271613, 273182), (271613, 272457), (271613, 271801), (271613, 272421), (271613, 272556), (271875, 272421), (271875, 273182), (272883, 273182), (273387, 273469), (273392, 273460), (273392, 273469), (274528, 279184)] 2021-10-25 09:35:23.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11412832, 11412914), (11413559, 11413613), (11414032, 11414090), (11414642, 11414701), (11415490, 11415547)] 2021-10-25 09:35:23.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:23.975 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:23.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030530: ['FBtr0073834', 'FBtr0340292', 'FBtr0303418', 'FBtr0303419'] 2021-10-25 09:35:23.993 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17548534, 17548885), (17548962, 17549068), (17551064, 17551124), (17551391, 17551443), (17551391, 17551449)] 2021-10-25 09:35:23.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17549068, 17551391, 'FBtr0086946_exon_3') contains intron (17551064, 17551124) 2021-10-25 09:35:23.994 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17549068, 17551391, 'FBtr0113090_exon_3') contains intron (17551064, 17551124) 2021-10-25 09:35:23.995 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17549068, 17551391, 'FBtr0340219_exon_3') contains intron (17551064, 17551124) 2021-10-25 09:35:23.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086946_exon_3', 'FBtr0113090_exon_3', 'FBtr0340219_exon_3'] 2021-10-25 09:35:23.995 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259140: ['FBtr0332131'] 2021-10-25 09:35:24.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259140 has a single transcript. 2021-10-25 09:35:24.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050431: ['FBtr0085991'] 2021-10-25 09:35:24.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050431 has a single transcript. 2021-10-25 09:35:24.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050432: ['FBtr0307499'] 2021-10-25 09:35:24.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050432 has a single transcript. 2021-10-25 09:35:24.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259143: ['FBtr0299558', 'FBtr0299559', 'FBtr0339839', 'FBtr0339840'] 2021-10-25 09:35:24.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050438: ['FBtr0086067', 'FBtr0086068', 'FBtr0086069', 'FBtr0086070', 'FBtr0335263'] 2021-10-25 09:35:24.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037895: ['FBtr0082405'] 2021-10-25 09:35:24.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037895 has a single transcript. 2021-10-25 09:35:24.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037896: ['FBtr0082404', 'FBtr0301146'] 2021-10-25 09:35:24.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13826717, 13826786), (13826952, 13827042), (13827105, 13827339), (13827120, 13827339), (13827509, 13827578), (13827719, 13828223), (13827719, 13828641), (13828253, 13828641)] 2021-10-25 09:35:24.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11419595, 11419738), (11419779, 11419834), (11420046, 11420098), (11420650, 11420698), (11421375, 11421454), (11421589, 11421641)] 2021-10-25 09:35:24.089 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11420098, 11421375, 'FBtr0082404_exon_3') contains intron (11420650, 11420698) 2021-10-25 09:35:24.089 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082404_exon_3'] 2021-10-25 09:35:24.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26536397, 26537370), (26536419, 26537370), (26536501, 26537370), (26536531, 26537370), (26536592, 26537370), (26536601, 26537370), (26537784, 26545042), (26545160, 26554356), (26554939, 26555232), (26555651, 26566360), (26555651, 26556213), (26556288, 26566360), (26566575, 26566923), (26567226, 26567287), (26567367, 26567476), (26567745, 26573853), (26567745, 26573503), (26568670, 26573423), (26573770, 26573853), (26574461, 26574579), (26574780, 26574850), (26575037, 26575164), (26575448, 26576356), (26575448, 26578720), (26576641, 26578720), (26576641, 26578723), (26578831, 26579101), (26579281, 26579438), (26579281, 26579643), (26579468, 26579643), (26579802, 26579888), (26580102, 26580177), (26580266, 26580332), (26580626, 26580695), (26581022, 26589907), (26581022, 26582664), (26581022, 26584299), (26590058, 26590440), (26590717, 26597646), (26590717, 26594775), (26590717, 26598576), (26598123, 26598576), (26598712, 26603559), (26598712, 26601246), (26598712, 26599107), (26599293, 26601246), (26602939, 26603559)] 2021-10-25 09:35:24.097 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0308626_exon_25') contains intron (26602939, 26603559) 2021-10-25 09:35:24.098 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0308627_exon_24') contains intron (26602939, 26603559) 2021-10-25 09:35:24.098 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0308628_exon_26') contains intron (26602939, 26603559) 2021-10-25 09:35:24.099 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0308629_exon_25') contains intron (26602939, 26603559) 2021-10-25 09:35:24.102 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0308633_exon_27') contains intron (26602939, 26603559) 2021-10-25 09:35:24.104 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (26601246, 26604051, 'FBtr0335520_exon_18') contains intron (26602939, 26603559) 2021-10-25 09:35:24.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308626_exon_25', 'FBtr0308627_exon_24', 'FBtr0308628_exon_26', 'FBtr0308629_exon_25', 'FBtr0308633_exon_27', 'FBtr0335520_exon_18'] 2021-10-25 09:35:24.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.116 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12464619, 12465248), (12465488, 12475639), (12471908, 12475639), (12475260, 12475639), (12475840, 12475914), (12475997, 12476152), (12476268, 12476336), (12476268, 12476318)] 2021-10-25 09:35:24.117 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.117 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034242: ['FBtr0086827', 'FBtr0304733'] 2021-10-25 09:35:24.147 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5496973, 5527292), (5519686, 5527292), (5525060, 5527292), (5527375, 5528755), (5527375, 5539245), (5528813, 5539245), (5539429, 5547627), (5547924, 5547987), (5548775, 5548827)] 2021-10-25 09:35:24.149 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.149 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037897: ['FBtr0082387'] 2021-10-25 09:35:24.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037897 has a single transcript. 2021-10-25 09:35:24.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037898: ['FBtr0300901', 'FBtr0339374'] 2021-10-25 09:35:24.180 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17564665, 17564718), (17565103, 17565163), (17565324, 17565387)] 2021-10-25 09:35:24.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.212 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11430124, 11430179), (11430270, 11430338), (11430274, 11430338), (11430571, 11430626)] 2021-10-25 09:35:24.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030536: ['FBtr0073854'] 2021-10-25 09:35:24.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030536 has a single transcript. 2021-10-25 09:35:24.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030537: ['FBtr0073868', 'FBtr0304579'] 2021-10-25 09:35:24.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034243: ['FBtr0086906'] 2021-10-25 09:35:24.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034243 has a single transcript. 2021-10-25 09:35:24.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034245: ['FBtr0086905', 'FBtr0329864'] 2021-10-25 09:35:24.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14169615, 14169717)] 2021-10-25 09:35:24.266 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14169591, 14171545, 'FBtr0073868_exon_1') contains intron (14169615, 14169717) 2021-10-25 09:35:24.266 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073868_exon_1'] 2021-10-25 09:35:24.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037899: ['FBtr0082403'] 2021-10-25 09:35:24.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037899 has a single transcript. 2021-10-25 09:35:24.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259145: ['FBtr0299572', 'FBtr0299573', 'FBtr0330241'] 2021-10-25 09:35:24.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037900: ['FBtr0082390', 'FBtr0339375'] 2021-10-25 09:35:24.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17572523, 17572651)] 2021-10-25 09:35:24.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.330 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030538: ['FBtr0089267'] 2021-10-25 09:35:24.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030538 has a single transcript. 2021-10-25 09:35:24.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11432940, 11432994)] 2021-10-25 09:35:24.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050440: ['FBtr0086076'] 2021-10-25 09:35:24.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050440 has a single transcript. 2021-10-25 09:35:24.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030539: ['FBtr0073891'] 2021-10-25 09:35:24.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030539 has a single transcript. 2021-10-25 09:35:24.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050441: ['FBtr0299872'] 2021-10-25 09:35:24.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050441 has a single transcript. 2021-10-25 09:35:24.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030540: ['FBtr0073892', 'FBtr0343143'] 2021-10-25 09:35:24.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034246: ['FBtr0086904', 'FBtr0340217'] 2021-10-25 09:35:24.356 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22744182, 22744251), (22744397, 22744510), (22744718, 22745044), (22744736, 22745044), (22745212, 22746875), (22745212, 22746887), (22747025, 22747135), (22747277, 22747366), (22747518, 22757864), (22758931, 22759050), (22759405, 22777022), (22759405, 22759763), (22760588, 22777022), (22777314, 22796895)] 2021-10-25 09:35:24.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050443: ['FBtr0086109'] 2021-10-25 09:35:24.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050443 has a single transcript. 2021-10-25 09:35:24.357 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.357 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050446: ['FBtr0086142'] 2021-10-25 09:35:24.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050446 has a single transcript. 2021-10-25 09:35:24.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050447: ['FBtr0086338', 'FBtr0300422', 'FBtr0306043'] 2021-10-25 09:35:24.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:24.395 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.395 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037901: ['FBtr0082402', 'FBtr0308211'] 2021-10-25 09:35:24.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17578495, 17578553), (17578495, 17578556), (17578728, 17578794), (17579352, 17579415), (17580112, 17580168), (17580476, 17580915), (17581093, 17581214), (17581345, 17581405)] 2021-10-25 09:35:24.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030541: ['FBtr0073893'] 2021-10-25 09:35:24.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030541 has a single transcript. 2021-10-25 09:35:24.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19947250, 19947327), (19947250, 19947323), (19947250, 19947330)] 2021-10-25 09:35:24.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11433964, 11434171), (11435299, 11435361)] 2021-10-25 09:35:24.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030542: ['FBtr0100281'] 2021-10-25 09:35:24.454 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030542 has a single transcript. 2021-10-25 09:35:24.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030543: ['FBtr0114508'] 2021-10-25 09:35:24.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030543 has a single transcript. 2021-10-25 09:35:24.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034247: ['FBtr0086903'] 2021-10-25 09:35:24.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034247 has a single transcript. 2021-10-25 09:35:24.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030544: ['FBtr0073928', 'FBtr0343144'] 2021-10-25 09:35:24.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034248: ['FBtr0086902', 'FBtr0329863', 'FBtr0345525'] 2021-10-25 09:35:24.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259146: ['FBtr0334898'] 2021-10-25 09:35:24.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259146 has a single transcript. 2021-10-25 09:35:24.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259148: ['FBtr0302430'] 2021-10-25 09:35:24.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259148 has a single transcript. 2021-10-25 09:35:24.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259149: ['FBtr0307205', 'FBtr0299596'] 2021-10-25 09:35:24.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037902: ['FBtr0082391'] 2021-10-25 09:35:24.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037902 has a single transcript. 2021-10-25 09:35:24.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14191724, 14191878)] 2021-10-25 09:35:24.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037906: ['FBtr0082396', 'FBtr0082397', 'FBtr0082398', 'FBtr0306097', 'FBtr0306098', 'FBtr0306099'] 2021-10-25 09:35:24.528 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005533: ['FBtr0076479'] 2021-10-25 09:35:24.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005533 has a single transcript. 2021-10-25 09:35:24.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5773941, 5774005), (5774369, 5776182), (5774369, 5774557), (5774896, 5776182)] 2021-10-25 09:35:24.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.541 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17586042, 17586265)] 2021-10-25 09:35:24.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.542 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.542 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050449: ['FBtr0472547'] 2021-10-25 09:35:24.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050449 has a single transcript. 2021-10-25 09:35:24.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005536: ['FBtr0075441', 'FBtr0112850', 'FBtr0112851', 'FBtr0112852', 'FBtr0301472', 'FBtr0301473', 'FBtr0301575', 'FBtr0308212', 'FBtr0308213', 'FBtr0308214', 'FBtr0308215', 'FBtr0308216', 'FBtr0333616'] 2021-10-25 09:35:24.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050452: ['FBtr0086449'] 2021-10-25 09:35:24.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050452 has a single transcript. 2021-10-25 09:35:24.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030545: ['FBtr0073899'] 2021-10-25 09:35:24.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030545 has a single transcript. 2021-10-25 09:35:24.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050454: ['FBtr0086445'] 2021-10-25 09:35:24.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050454 has a single transcript. 2021-10-25 09:35:24.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030551: ['FBtr0073926'] 2021-10-25 09:35:24.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030551 has a single transcript. 2021-10-25 09:35:24.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030552: ['FBtr0073902'] 2021-10-25 09:35:24.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030552 has a single transcript. 2021-10-25 09:35:24.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050456: ['FBtr0333550', 'FBtr0273336', 'FBtr0273337'] 2021-10-25 09:35:24.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030554: ['FBtr0073903', 'FBtr0339437'] 2021-10-25 09:35:24.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259150: ['FBtr0331167', 'FBtr0331168', 'FBtr0346834'] 2021-10-25 09:35:24.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11453299, 11453451), (11453820, 11454020), (11453820, 11454224), (11453820, 11453915), (11453820, 11457585), (11453820, 11460446), (11453820, 11454081)] 2021-10-25 09:35:24.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.657 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14238581, 14238642), (14239605, 14239672)] 2021-10-25 09:35:24.658 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.658 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034249: ['FBtr0086900', 'FBtr0329862'] 2021-10-25 09:35:24.677 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17100388, 17102511), (17103687, 17105597), (17104661, 17105763), (17105696, 17105759), (17106057, 17106116), (17106203, 17106265), (17106370, 17106431), (17106566, 17106632)] 2021-10-25 09:35:24.678 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.678 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.686 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5655184, 5655257), (5655443, 5655509), (5655606, 5655664), (5655782, 5655851), (5656646, 5660184), (5662329, 5662822), (5662329, 5662661)] 2021-10-25 09:35:24.687 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.687 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.696 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331167': ['FBtr0346834']} 2021-10-25 09:35:24.697 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346834']] 2021-10-25 09:35:24.706 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17587028, 17587091), (17587399, 17587532), (17588531, 17588619), (17588786, 17589053), (17589854, 17589907), (17590140, 17590205)] 2021-10-25 09:35:24.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030555: ['FBtr0073923'] 2021-10-25 09:35:24.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030555 has a single transcript. 2021-10-25 09:35:24.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030556: ['FBtr0073922'] 2021-10-25 09:35:24.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030556 has a single transcript. 2021-10-25 09:35:24.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030558: ['FBtr0073908', 'FBtr0339497'] 2021-10-25 09:35:24.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259151: ['FBtr0299599'] 2021-10-25 09:35:24.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259151 has a single transcript. 2021-10-25 09:35:24.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259152: ['FBtr0301277', 'FBtr0301278'] 2021-10-25 09:35:24.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034251: ['FBtr0086834'] 2021-10-25 09:35:24.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034251 has a single transcript. 2021-10-25 09:35:24.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034253: ['FBtr0086895'] 2021-10-25 09:35:24.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034253 has a single transcript. 2021-10-25 09:35:24.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14261933, 14263449), (14263964, 14264030), (14264324, 14264390)] 2021-10-25 09:35:24.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050457: ['FBtr0086998'] 2021-10-25 09:35:24.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050457 has a single transcript. 2021-10-25 09:35:24.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034255: ['FBtr0086896'] 2021-10-25 09:35:24.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034255 has a single transcript. 2021-10-25 09:35:24.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050458: ['FBtr0086999'] 2021-10-25 09:35:24.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050458 has a single transcript. 2021-10-25 09:35:24.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034258: ['FBtr0086836', 'FBtr0340269'] 2021-10-25 09:35:24.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050460: ['FBtr0302611', 'FBtr0087009', 'FBtr0087010', 'FBtr0087011', 'FBtr0087012', 'FBtr0113378', 'FBtr0273340', 'FBtr0273341', 'FBtr0300958'] 2021-10-25 09:35:24.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25127617, 25127757), (25127866, 25127931), (25128661, 25128732), (25129610, 25129672), (25130788, 25130846)] 2021-10-25 09:35:24.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030559: ['FBtr0299543'] 2021-10-25 09:35:24.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17665816, 17666031), (17666159, 17666221), (17668985, 17669031)] 2021-10-25 09:35:24.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030559 has a single transcript. 2021-10-25 09:35:24.834 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17666221, 17669178, 'FBtr0086836_exon_3') contains intron (17668985, 17669031) 2021-10-25 09:35:24.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086836_exon_3'] 2021-10-25 09:35:24.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030562: ['FBtr0073920'] 2021-10-25 09:35:24.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030562 has a single transcript. 2021-10-25 09:35:24.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030563: ['FBtr0073919'] 2021-10-25 09:35:24.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030563 has a single transcript. 2021-10-25 09:35:24.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030566: ['FBtr0073915'] 2021-10-25 09:35:24.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030566 has a single transcript. 2021-10-25 09:35:24.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030569: ['FBtr0073916'] 2021-10-25 09:35:24.872 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030569 has a single transcript. 2021-10-25 09:35:24.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16052150, 16053011), (16052150, 16053029), (16052150, 16052754), (16052150, 16053004), (16052174, 16052754), (16052174, 16053004), (16053560, 16062130), (16062243, 16062307), (16062862, 16063084), (16062862, 16063087), (16063173, 16063298), (16063173, 16063542), (16063173, 16063885), (16063737, 16063885), (16063999, 16064226), (16063999, 16064229), (16064317, 16065047), (16064317, 16066022), (16065434, 16066022), (16066109, 16066184), (16066109, 16066612), (16066313, 16066612), (16066829, 16068112), (16066829, 16070119), (16068943, 16070119), (16070264, 16070327), (16070570, 16070832), (16070930, 16071108), (16071171, 16076981), (16073470, 16075473), (16075764, 16076229), (16076648, 16076981), (16077124, 16077191), (16077282, 16078819), (16077282, 16080758), (16077282, 16077722), (16077809, 16080758), (16077809, 16078819)] 2021-10-25 09:35:24.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259162: ['FBtr0332385'] 2021-10-25 09:35:24.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0259162 has a single transcript. 2021-10-25 09:35:24.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.878 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037908: ['FBtr0082394', 'FBtr0082395'] 2021-10-25 09:35:24.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030570: ['FBtr0073929'] 2021-10-25 09:35:24.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030570 has a single transcript. 2021-10-25 09:35:24.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0259163: ['FBtr0299606', 'FBtr0299607', 'FBtr0301858', 'FBtr0331537', 'FBtr0331538', 'FBtr0331539', 'FBtr0331540', 'FBtr0331541'] 2021-10-25 09:35:24.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034259: ['FBtr0086892'] 2021-10-25 09:35:24.897 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034259 has a single transcript. 2021-10-25 09:35:24.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030571: ['FBtr0073932', 'FBtr0073930', 'FBtr0303288', 'FBtr0339460'] 2021-10-25 09:35:24.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034261: ['FBtr0086839', 'FBtr0086840'] 2021-10-25 09:35:24.926 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11500428, 11501116), (11501245, 11503411), (11503780, 11504294), (11504552, 11505273), (11505526, 11505588)] 2021-10-25 09:35:24.927 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.927 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17683728, 17687257), (17686938, 17687257), (17687492, 17687555), (17687798, 17687853), (17687948, 17688006), (17689525, 17689582), (17689815, 17689873)] 2021-10-25 09:35:24.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:24.954 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:24.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263290: ['FBtr0308635'] 2021-10-25 09:35:24.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263290 has a single transcript. 2021-10-25 09:35:24.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037910: ['FBtr0082409'] 2021-10-25 09:35:24.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037910 has a single transcript. 2021-10-25 09:35:24.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263314: ['FBtr0308708'] 2021-10-25 09:35:24.990 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263314 has a single transcript. 2021-10-25 09:35:24.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037911: ['FBtr0082410'] 2021-10-25 09:35:24.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037911 has a single transcript. 2021-10-25 09:35:25.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14580677, 14580739), (14580846, 14580894), (14580846, 14580964), (14580846, 14580918), (14581039, 14581581), (14581674, 14581748)] 2021-10-25 09:35:25.001 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17067454, 17067525), (17068215, 17069898), (17069757, 17071726), (17069757, 17069898), (17070676, 17071119), (17071505, 17071726), (17071855, 17071971), (17072381, 17072529), (17072912, 17075441), (17072912, 17075648), (17072912, 17081112), (17081849, 17087222)] 2021-10-25 09:35:25.002 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14580599, 14580846, 'FBtr0073932_exon_1') contains intron (14580677, 14580739) 2021-10-25 09:35:25.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037912: ['FBtr0100461', 'FBtr0100462', 'FBtr0100464', 'FBtr0100465'] 2021-10-25 09:35:25.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073932_exon_1'] 2021-10-25 09:35:25.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263316: ['FBtr0302027'] 2021-10-25 09:35:25.004 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263316 has a single transcript. 2021-10-25 09:35:25.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034262: ['FBtr0086889'] 2021-10-25 09:35:25.015 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034262 has a single transcript. 2021-10-25 09:35:25.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263320: ['FBtr0343841', 'FBtr0308744'] 2021-10-25 09:35:25.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034263: ['FBtr0086859'] 2021-10-25 09:35:25.024 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034263 has a single transcript. 2021-10-25 09:35:25.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034264: ['FBtr0086860'] 2021-10-25 09:35:25.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034264 has a single transcript. 2021-10-25 09:35:25.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034265: ['FBtr0086885'] 2021-10-25 09:35:25.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034265 has a single transcript. 2021-10-25 09:35:25.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:25.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11560792, 11560851), (11561205, 11562200), (11561205, 11563225), (11561205, 11563099), (11561205, 11564439), (11564711, 11566917)] 2021-10-25 09:35:25.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.099 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.110 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9735289, 9736927), (9735289, 9737128), (9735289, 9735671), (9735680, 9735970), (9735992, 9736927), (9736965, 9737128), (9737281, 9738110), (9737281, 9738125), (9738278, 9738382), (9738278, 9738892), (9738415, 9738892), (9739313, 9747134), (9739313, 9743509), (9739313, 9739408), (9748068, 9748125), (9749075, 9749194), (9749438, 9749517), (9749766, 9750052), (9750299, 9750891), (9750299, 9752875), (9753433, 9760108), (9753433, 9759947)] 2021-10-25 09:35:25.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.119 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263321: ['FBtr0343842', 'FBtr0308745'] 2021-10-25 09:35:25.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030572: ['FBtr0073945'] 2021-10-25 09:35:25.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030572 has a single transcript. 2021-10-25 09:35:25.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030573: ['FBtr0073933'] 2021-10-25 09:35:25.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030573 has a single transcript. 2021-10-25 09:35:25.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030574: ['FBtr0073943', 'FBtr0073944', 'FBtr0343365', 'FBtr0343366'] 2021-10-25 09:35:25.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034266: ['FBtr0299816', 'FBtr0340274'] 2021-10-25 09:35:25.371 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:25.372 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.372 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17726949, 17727003), (17728084, 17728145), (17728521, 17731103), (17731384, 17731466), (17732141, 17732197), (17732275, 17732344), (17732579, 17732637)] 2021-10-25 09:35:25.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263322: ['FBtr0308746'] 2021-10-25 09:35:25.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263322 has a single transcript. 2021-10-25 09:35:25.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263323: ['FBtr0342858'] 2021-10-25 09:35:25.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263323 has a single transcript. 2021-10-25 09:35:25.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263324: ['FBtr0344618'] 2021-10-25 09:35:25.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263324 has a single transcript. 2021-10-25 09:35:25.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263325: ['FBtr0347191', 'FBtr0347192'] 2021-10-25 09:35:25.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14586436, 14586496), (14586753, 14587060), (14586815, 14587060), (14587157, 14587265), (14587764, 14587921), (14587997, 14588057), (14588164, 14588629), (14588731, 14590245), (14590292, 14590916), (14591088, 14602461), (14591088, 14591319)] 2021-10-25 09:35:25.573 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14587921, 14588164, 'FBtr0073943_exon_5') contains intron (14587997, 14588057) 2021-10-25 09:35:25.573 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14587921, 14588164, 'FBtr0073944_exon_5') contains intron (14587997, 14588057) 2021-10-25 09:35:25.574 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14587921, 14588164, 'FBtr0343366_exon_5') contains intron (14587997, 14588057) 2021-10-25 09:35:25.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073943_exon_5', 'FBtr0073944_exon_5', 'FBtr0343366_exon_5'] 2021-10-25 09:35:25.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034267: ['FBtr0086862', 'FBtr0299817', 'FBtr0301182', 'FBtr0301183'] 2021-10-25 09:35:25.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037913: ['FBtr0100320', 'FBtr0100321', 'FBtr0100323'] 2021-10-25 09:35:25.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18251598, 18251652), (18251598, 18252329)] 2021-10-25 09:35:25.618 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.685 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11560792, 11560851), (11561205, 11564439), (11564371, 11564439), (11564711, 11566917), (11564711, 11564783), (11565111, 11566917)] 2021-10-25 09:35:25.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263326: ['FBtr0342757', 'FBtr0308782'] 2021-10-25 09:35:25.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17726949, 17727003), (17728084, 17728145), (17728521, 17731103), (17729312, 17731103), (17731384, 17731466), (17732141, 17732197), (17732275, 17732323), (17732275, 17732344), (17732579, 17732637)] 2021-10-25 09:35:25.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:25.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030575: ['FBtr0290021', 'FBtr0343596'] 2021-10-25 09:35:25.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050461: ['FBtr0344458', 'FBtr0344459', 'FBtr0344460'] 2021-10-25 09:35:25.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263327: ['FBtr0452164'] 2021-10-25 09:35:25.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263327 has a single transcript. 2021-10-25 09:35:25.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037915: ['FBtr0082460'] 2021-10-25 09:35:25.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037915 has a single transcript. 2021-10-25 09:35:25.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037916: ['FBtr0301159'] 2021-10-25 09:35:25.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263328: ['FBtr0308751'] 2021-10-25 09:35:25.840 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037916 has a single transcript. 2021-10-25 09:35:25.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263328 has a single transcript. 2021-10-25 09:35:25.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005558: ['FBtr0089235', 'FBtr0089236', 'FBtr0100395', 'FBtr0100396'] 2021-10-25 09:35:25.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037917: ['FBtr0082413', 'FBtr0082414'] 2021-10-25 09:35:25.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263329: ['FBtr0308752'] 2021-10-25 09:35:25.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263329 has a single transcript. 2021-10-25 09:35:25.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263330: ['FBtr0308753'] 2021-10-25 09:35:25.861 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263330 has a single transcript. 2021-10-25 09:35:25.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263331: ['FBtr0308754'] 2021-10-25 09:35:25.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263331 has a single transcript. 2021-10-25 09:35:25.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263332: ['FBtr0343815', 'FBtr0308755'] 2021-10-25 09:35:25.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14680520, 14680591)] 2021-10-25 09:35:25.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11581839, 11583313), (11582984, 11583042), (11583556, 11583700), (11584065, 11584123)] 2021-10-25 09:35:25.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.943 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18200561, 18200649)] 2021-10-25 09:35:25.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16996301, 16996355), (16996728, 16996991), (16996751, 16996991), (16998400, 16998459)] 2021-10-25 09:35:25.945 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034269: ['FBtr0086883', 'FBtr0086884'] 2021-10-25 09:35:25.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030576: ['FBtr0073939', 'FBtr0339769'] 2021-10-25 09:35:25.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037918: ['FBtr0082458', 'FBtr0082459'] 2021-10-25 09:35:25.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(697883, 710916), (705273, 710916), (705273, 707491), (707671, 710916), (711082, 712492), (712673, 713857), (714512, 717126), (717300, 717653), (717929, 719273), (719628, 720321)] 2021-10-25 09:35:25.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17736276, 17736331), (17737033, 17737089), (17737033, 17737095)] 2021-10-25 09:35:25.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.995 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:25.997 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14758335, 14758396), (14759137, 14759244), (14759646, 14759997), (14760366, 14765402), (14760369, 14765402)] 2021-10-25 09:35:25.998 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:25.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263333: ['FBtr0308759', 'FBtr0308760'] 2021-10-25 09:35:26.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11585466, 11586378), (11588502, 11588559), (11589013, 11589067)] 2021-10-25 09:35:26.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050462: ['FBtr0100120', 'FBtr0346515', 'FBtr0336870'] 2021-10-25 09:35:26.053 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20297165, 20297223)] 2021-10-25 09:35:26.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20296642, 20297299, 'FBtr0308759_exon_1') contains intron (20297165, 20297223) 2021-10-25 09:35:26.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034270: ['FBtr0086882', 'FBtr0340278'] 2021-10-25 09:35:26.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308759_exon_1'] 2021-10-25 09:35:26.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030577: ['FBtr0073935'] 2021-10-25 09:35:26.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030577 has a single transcript. 2021-10-25 09:35:26.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030578: ['FBtr0073936'] 2021-10-25 09:35:26.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030578 has a single transcript. 2021-10-25 09:35:26.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037920: ['FBtr0299566'] 2021-10-25 09:35:26.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037920 has a single transcript. 2021-10-25 09:35:26.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030581: ['FBtr0073990', 'FBtr0340466', 'FBtr0339446', 'FBtr0339447', 'FBtr0305580'] 2021-10-25 09:35:26.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037921: ['FBtr0082451', 'FBtr0307351'] 2021-10-25 09:35:26.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17738771, 17738827), (17739065, 17739132), (17739378, 17739447)] 2021-10-25 09:35:26.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263334: ['FBtr0308761', 'FBtr0308762'] 2021-10-25 09:35:26.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16996301, 16996355), (16996728, 16996991), (16996751, 16996991), (16998400, 16998459)] 2021-10-25 09:35:26.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.124 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11621944, 11622014), (11622149, 11622206), (11622856, 11622914), (11623233, 11623391), (11624302, 11624354), (11624828, 11625474)] 2021-10-25 09:35:26.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005561: ['FBtr0089327', 'FBtr0089328', 'FBtr0100342', 'FBtr0100344', 'FBtr0100345', 'FBtr0100346', 'FBtr0301563'] 2021-10-25 09:35:26.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034271: ['FBtr0086864'] 2021-10-25 09:35:26.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034271 has a single transcript. 2021-10-25 09:35:26.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16078607, 16078663), (16078643, 16078714)] 2021-10-25 09:35:26.171 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034272: ['FBtr0086865'] 2021-10-25 09:35:26.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034272 has a single transcript. 2021-10-25 09:35:26.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037922: ['FBtr0082416'] 2021-10-25 09:35:26.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037922 has a single transcript. 2021-10-25 09:35:26.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034274: ['FBtr0089545'] 2021-10-25 09:35:26.191 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034274 has a single transcript. 2021-10-25 09:35:26.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037923: ['FBtr0300580', 'FBtr0300581', 'FBtr0345158'] 2021-10-25 09:35:26.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14828031, 14829135), (14828031, 14828660), (14830347, 14830432), (14830347, 14831091), (14830500, 14831091), (14830507, 14831091), (14831510, 14831603), (14831666, 14831740)] 2021-10-25 09:35:26.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034275: ['FBtr0089546'] 2021-10-25 09:35:26.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034275 has a single transcript. 2021-10-25 09:35:26.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034276: ['FBtr0089560'] 2021-10-25 09:35:26.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034276 has a single transcript. 2021-10-25 09:35:26.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034277: ['FBtr0089559', 'FBtr0340276'] 2021-10-25 09:35:26.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263335: ['FBtr0308763'] 2021-10-25 09:35:26.229 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263335 has a single transcript. 2021-10-25 09:35:26.235 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050463: ['FBtr0087112', 'FBtr0087113', 'FBtr0113379', 'FBtr0113380', 'FBtr0113381'] 2021-10-25 09:35:26.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263336: ['FBtr0308765', 'FBtr0308766'] 2021-10-25 09:35:26.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11625186, 11625474), (11625625, 11625697), (11625943, 11626002), (11626415, 11626475)] 2021-10-25 09:35:26.261 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11625268, 11625943, 'FBtr0300580_exon_3') contains intron (11625625, 11625697) 2021-10-25 09:35:26.261 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11625474, 11625943, 'FBtr0345158_exon_3') contains intron (11625625, 11625697) 2021-10-25 09:35:26.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300580_exon_3', 'FBtr0345158_exon_3'] 2021-10-25 09:35:26.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17765048, 17765110), (17765051, 17765110), (17766392, 17766460), (17766699, 17766868)] 2021-10-25 09:35:26.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16818500, 16818589), (16818531, 16818589), (16818694, 16818978)] 2021-10-25 09:35:26.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.287 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.314 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1088876, 1092258), (1089062, 1092258), (1092628, 1095575), (1095716, 1095793), (1095832, 1101933), (1098958, 1101933), (1102099, 1103534), (1103732, 1106151), (1106597, 1107698), (1107790, 1108097), (1108344, 1108473), (1108344, 1108479), (1108344, 1110780), (1108572, 1109108), (1108572, 1110780), (1109600, 1110780), (1110888, 1111287)] 2021-10-25 09:35:26.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034278: ['FBtr0089558'] 2021-10-25 09:35:26.322 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034278 has a single transcript. 2021-10-25 09:35:26.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034279: ['FBtr0089557'] 2021-10-25 09:35:26.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034279 has a single transcript. 2021-10-25 09:35:26.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034281: ['FBtr0086801'] 2021-10-25 09:35:26.337 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034281 has a single transcript. 2021-10-25 09:35:26.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263337: ['FBtr0308767'] 2021-10-25 09:35:26.341 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263337 has a single transcript. 2021-10-25 09:35:26.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034282: ['FBtr0086822', 'FBtr0086823', 'FBtr0113091', 'FBtr0300410'] 2021-10-25 09:35:26.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263338: ['FBtr0308768'] 2021-10-25 09:35:26.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263338 has a single transcript. 2021-10-25 09:35:26.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16674863, 16675140), (16675248, 16678410), (16675248, 16678745), (16678512, 16678980), (16678856, 16678980), (16679071, 16679136), (16679279, 16680998), (16681217, 16683870), (16681217, 16697985), (16698179, 16698973), (16699138, 16699205), (16699574, 16705508), (16706279, 16730898), (16706279, 16716153), (16716211, 16730898)] 2021-10-25 09:35:26.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263339: ['FBtr0308769'] 2021-10-25 09:35:26.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263339 has a single transcript. 2021-10-25 09:35:26.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263340: ['FBtr0308772'] 2021-10-25 09:35:26.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263340 has a single transcript. 2021-10-25 09:35:26.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263341: ['FBtr0308773'] 2021-10-25 09:35:26.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263341 has a single transcript. 2021-10-25 09:35:26.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037924: ['FBtr0082418'] 2021-10-25 09:35:26.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037924 has a single transcript. 2021-10-25 09:35:26.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263342: ['FBtr0308775', 'FBtr0308776'] 2021-10-25 09:35:26.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037926: ['FBtr0082420', 'FBtr0335447', 'FBtr0335448'] 2021-10-25 09:35:26.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030582: ['FBtr0073946', 'FBtr0073947', 'FBtr0300432', 'FBtr0300433'] 2021-10-25 09:35:26.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(637689, 637747), (637813, 638130)] 2021-10-25 09:35:26.428 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (637485, 637813, 'FBtr0308775_exon_2') contains intron (637689, 637747) 2021-10-25 09:35:26.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308775_exon_2'] 2021-10-25 09:35:26.428 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17867253, 17867325), (17867559, 17867782), (17867559, 17868286), (17868088, 17868286), (17868369, 17868431), (17868808, 17871328), (17871495, 17871564), (17871661, 17871904)] 2021-10-25 09:35:26.443 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17871328, 17871661, 'FBtr0086823_exon_2') contains intron (17871495, 17871564) 2021-10-25 09:35:26.444 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17871328, 17871661, 'FBtr0300410_exon_2') contains intron (17871495, 17871564) 2021-10-25 09:35:26.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086823_exon_2', 'FBtr0300410_exon_2'] 2021-10-25 09:35:26.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11651574, 11651623), (11651574, 11651635), (11652776, 11652855), (11654238, 11654291), (11654238, 11654294), (11654526, 11654594), (11654965, 11655122)] 2021-10-25 09:35:26.445 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.472 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14832945, 14833143), (14832960, 14833143)] 2021-10-25 09:35:26.473 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.473 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263343: ['FBtr0308777'] 2021-10-25 09:35:26.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263343 has a single transcript. 2021-10-25 09:35:26.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263344: ['FBtr0308778'] 2021-10-25 09:35:26.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263344 has a single transcript. 2021-10-25 09:35:26.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263345: ['FBtr0308779', 'FBtr0308780'] 2021-10-25 09:35:26.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037930: ['FBtr0082423'] 2021-10-25 09:35:26.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037930 has a single transcript. 2021-10-25 09:35:26.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050464: ['FBtr0273344'] 2021-10-25 09:35:26.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050464 has a single transcript. 2021-10-25 09:35:26.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037931: ['FBtr0082443'] 2021-10-25 09:35:26.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037931 has a single transcript. 2021-10-25 09:35:26.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22850372, 22852410), (22852194, 22852410)] 2021-10-25 09:35:26.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050466: ['FBtr0087339', 'FBtr0340004'] 2021-10-25 09:35:26.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037933: ['FBtr0082424'] 2021-10-25 09:35:26.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037933 has a single transcript. 2021-10-25 09:35:26.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037934: ['FBtr0082439'] 2021-10-25 09:35:26.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037934 has a single transcript. 2021-10-25 09:35:26.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037935: ['FBtr0082438'] 2021-10-25 09:35:26.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037935 has a single transcript. 2021-10-25 09:35:26.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037936: ['FBtr0082437', 'FBtr0335212'] 2021-10-25 09:35:26.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15569538, 15571677), (15571608, 15571677), (15572757, 15572812)] 2021-10-25 09:35:26.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034283: ['FBtr0086818'] 2021-10-25 09:35:26.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034283 has a single transcript. 2021-10-25 09:35:26.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.609 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005564: ['FBtr0074973', 'FBtr0112853', 'FBtr0333273'] 2021-10-25 09:35:26.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034284: ['FBtr0086803'] 2021-10-25 09:35:26.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034284 has a single transcript. 2021-10-25 09:35:26.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030583: ['FBtr0073948'] 2021-10-25 09:35:26.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030583 has a single transcript. 2021-10-25 09:35:26.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034286: ['FBtr0300215', 'FBtr0340286'] 2021-10-25 09:35:26.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030584: ['FBtr0073989'] 2021-10-25 09:35:26.631 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030584 has a single transcript. 2021-10-25 09:35:26.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263346: ['FBtr0308855', 'FBtr0308856', 'FBtr0308857', 'FBtr0308858', 'FBtr0308849', 'FBtr0308850', 'FBtr0308851', 'FBtr0308852', 'FBtr0308853', 'FBtr0308854'] 2021-10-25 09:35:26.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11688641, 11688706), (11689073, 11689138), (11689623, 11689725)] 2021-10-25 09:35:26.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030586: ['FBtr0073987'] 2021-10-25 09:35:26.638 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030586 has a single transcript. 2021-10-25 09:35:26.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030587: ['FBtr0073986'] 2021-10-25 09:35:26.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030587 has a single transcript. 2021-10-25 09:35:26.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030588: ['FBtr0073985'] 2021-10-25 09:35:26.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030588 has a single transcript. 2021-10-25 09:35:26.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030589: ['FBtr0073984'] 2021-10-25 09:35:26.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030589 has a single transcript. 2021-10-25 09:35:26.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050467: ['FBtr0087334'] 2021-10-25 09:35:26.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050467 has a single transcript. 2021-10-25 09:35:26.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050468: ['FBtr0087329'] 2021-10-25 09:35:26.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050468 has a single transcript. 2021-10-25 09:35:26.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030590: ['FBtr0073983', 'FBtr0343598', 'FBtr0344175'] 2021-10-25 09:35:26.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050469: ['FBtr0273350'] 2021-10-25 09:35:26.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050469 has a single transcript. 2021-10-25 09:35:26.681 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17976530, 17977429), (17977543, 17977616), (17977790, 17978787), (17977793, 17978787), (17978896, 17979438), (17979540, 17989500), (17990003, 18007033)] 2021-10-25 09:35:26.681 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19568716, 19569660), (19568716, 19572290), (19569813, 19572290), (19572079, 19572290), (19572479, 19572713), (19572876, 19572998), (19573911, 19574493), (19575059, 19584310), (19575059, 19584321)] 2021-10-25 09:35:26.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050471: ['FBtr0329954'] 2021-10-25 09:35:26.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050471 has a single transcript. 2021-10-25 09:35:26.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050472: ['FBtr0332396'] 2021-10-25 09:35:26.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050472 has a single transcript. 2021-10-25 09:35:26.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037937: ['FBtr0082435'] 2021-10-25 09:35:26.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037937 has a single transcript. 2021-10-25 09:35:26.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050476: ['FBtr0087439'] 2021-10-25 09:35:26.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050476 has a single transcript. 2021-10-25 09:35:26.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037939: ['FBtr0082426'] 2021-10-25 09:35:26.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037939 has a single transcript. 2021-10-25 09:35:26.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050479: ['FBtr0087479', 'FBtr0332468'] 2021-10-25 09:35:26.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037940: ['FBtr0082428'] 2021-10-25 09:35:26.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037940 has a single transcript. 2021-10-25 09:35:26.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037941: ['FBtr0082429', 'FBtr0335210'] 2021-10-25 09:35:26.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14866473, 14869400), (14866473, 14870987), (14869618, 14870987), (14869618, 14869690), (14869745, 14870987)] 2021-10-25 09:35:26.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034288: ['FBtr0086804', 'FBtr0345582'] 2021-10-25 09:35:26.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14675228, 14675299)] 2021-10-25 09:35:26.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11722352, 11727014), (11722457, 11727014), (11727686, 11727784), (11728032, 11729282), (11729957, 11730078), (11730323, 11730383), (11730556, 11731332), (11731456, 11731871)] 2021-10-25 09:35:26.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005585: ['FBtr0082103', 'FBtr0334618'] 2021-10-25 09:35:26.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18018740, 18019045), (18019378, 18019438)] 2021-10-25 09:35:26.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9629615, 9629707), (9630180, 9630448), (9630553, 9630677)] 2021-10-25 09:35:26.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030592: ['FBtr0073980'] 2021-10-25 09:35:26.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030592 has a single transcript. 2021-10-25 09:35:26.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050480: ['FBtr0087478', 'FBtr0332466'] 2021-10-25 09:35:26.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037942: ['FBtr0082430', 'FBtr0335211'] 2021-10-25 09:35:26.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030593: ['FBtr0073979', 'FBtr0343381'] 2021-10-25 09:35:26.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034289: ['FBtr0089630'] 2021-10-25 09:35:26.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034289 has a single transcript. 2021-10-25 09:35:26.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034290: ['FBtr0086813', 'FBtr0340281', 'FBtr0345472'] 2021-10-25 09:35:26.875 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4659676, 4660238), (4659825, 4660238), (4659893, 4660238), (4660399, 4670796), (4670850, 4680228), (4670850, 4680778), (4680579, 4680778), (4680837, 4697190), (4697542, 4698048), (4698255, 4699716), (4699859, 4700170), (4700327, 4701157), (4702411, 4707025), (4702411, 4705722), (4705780, 4707025), (4706365, 4707025), (4708106, 4708675), (4709049, 4709159), (4710070, 4710176), (4710352, 4710615), (4710352, 4710897), (4710376, 4710615), (4710376, 4710897), (4710720, 4710897)] 2021-10-25 09:35:26.876 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4659578, 4660399, 'FBtr0308857_exon_1') contains intron (4659676, 4660238) 2021-10-25 09:35:26.877 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4659578, 4660399, 'FBtr0308858_exon_1') contains intron (4659676, 4660238) 2021-10-25 09:35:26.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14675228, 14675299)] 2021-10-25 09:35:26.878 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4659578, 4660399, 'FBtr0308850_exon_1') contains intron (4659676, 4660238) 2021-10-25 09:35:26.878 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14675170, 14678136, 'FBtr0087478_exon_1') contains intron (14675228, 14675299) 2021-10-25 09:35:26.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308857_exon_1', 'FBtr0308858_exon_1', 'FBtr0308850_exon_1'] 2021-10-25 09:35:26.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087478_exon_1'] 2021-10-25 09:35:26.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14902943, 14903963), (14904966, 14905431)] 2021-10-25 09:35:26.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.885 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11735857, 11735918), (11736443, 11736502)] 2021-10-25 09:35:26.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005586: ['FBtr0088257'] 2021-10-25 09:35:26.886 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005586 has a single transcript. 2021-10-25 09:35:26.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005590: ['FBtr0081261', 'FBtr0343860'] 2021-10-25 09:35:26.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18043421, 18043513)] 2021-10-25 09:35:26.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:26.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.939 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037943: ['FBtr0082431'] 2021-10-25 09:35:26.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037943 has a single transcript. 2021-10-25 09:35:26.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030594: ['FBtr0073978', 'FBtr0343380'] 2021-10-25 09:35:26.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050481: ['FBtr0100285'] 2021-10-25 09:35:26.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050481 has a single transcript. 2021-10-25 09:35:26.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037944: ['FBtr0082432', 'FBtr0082433', 'FBtr0330169', 'FBtr0307892'] 2021-10-25 09:35:26.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050484: ['FBtr0331382'] 2021-10-25 09:35:26.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050484 has a single transcript. 2021-10-25 09:35:26.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050485: ['FBtr0087640'] 2021-10-25 09:35:26.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050485 has a single transcript. 2021-10-25 09:35:26.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050486: ['FBtr0087817'] 2021-10-25 09:35:26.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050486 has a single transcript. 2021-10-25 09:35:26.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050487: ['FBtr0087802'] 2021-10-25 09:35:26.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050487 has a single transcript. 2021-10-25 09:35:26.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14908284, 14908679)] 2021-10-25 09:35:26.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:26.991 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:26.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050488: ['FBtr0087818', 'FBtr0306584'] 2021-10-25 09:35:27.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005593: ['FBtr0079946', 'FBtr0343653'] 2021-10-25 09:35:27.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12847239, 12847427), (12847816, 12847889), (12847816, 12847868)] 2021-10-25 09:35:27.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034291: ['FBtr0086812'] 2021-10-25 09:35:27.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034291 has a single transcript. 2021-10-25 09:35:27.052 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11745107, 11745168), (11745293, 11745357), (11748734, 11748789), (11748959, 11749241), (11748959, 11749697)] 2021-10-25 09:35:27.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030595: ['FBtr0073977', 'FBtr0343379'] 2021-10-25 09:35:27.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034292: ['FBtr0086811'] 2021-10-25 09:35:27.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034292 has a single transcript. 2021-10-25 09:35:27.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10201148, 10201229), (10201528, 10201598)] 2021-10-25 09:35:27.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.062 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034293: ['FBtr0086810', 'FBtr0345646'] 2021-10-25 09:35:27.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14910317, 14910623)] 2021-10-25 09:35:27.096 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050489: ['FBtr0089419', 'FBtr0345674'] 2021-10-25 09:35:27.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18049244, 18049328)] 2021-10-25 09:35:27.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.106 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005596: ['FBtr0085415', 'FBtr0330292'] 2021-10-25 09:35:27.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11121125, 11121189), (11121306, 11121360), (11121686, 11121746)] 2021-10-25 09:35:27.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.156 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29120220, 29120282), (29120522, 29120588), (29120736, 29120796), (29121616, 29121684), (29121906, 29121961)] 2021-10-25 09:35:27.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030596: ['FBtr0073976'] 2021-10-25 09:35:27.160 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030596 has a single transcript. 2021-10-25 09:35:27.164 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085415': ['FBtr0330292']} 2021-10-25 09:35:27.164 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330292']] 2021-10-25 09:35:27.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034294: ['FBtr0086809', 'FBtr0340280'] 2021-10-25 09:35:27.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030597: ['FBtr0073975'] 2021-10-25 09:35:27.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030597 has a single transcript. 2021-10-25 09:35:27.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005612: ['FBtr0072157', 'FBtr0072158', 'FBtr0343282'] 2021-10-25 09:35:27.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030598: ['FBtr0073974'] 2021-10-25 09:35:27.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030598 has a single transcript. 2021-10-25 09:35:27.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030599: ['FBtr0303295'] 2021-10-25 09:35:27.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030599 has a single transcript. 2021-10-25 09:35:27.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037949: ['FBtr0082531', 'FBtr0333819'] 2021-10-25 09:35:27.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030600: ['FBtr0073970', 'FBtr0346087'] 2021-10-25 09:35:27.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050491: ['FBtr0088919', 'FBtr0336997'] 2021-10-25 09:35:27.227 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18051373, 18051660)] 2021-10-25 09:35:27.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23980745, 23983543)] 2021-10-25 09:35:27.250 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11781939, 11782001), (11782370, 11782431), (11782632, 11782685), (11782899, 11782954), (11783358, 11783417), (11783570, 11783625), (11784092, 11784164), (11784464, 11784534), (11785413, 11785482), (11786428, 11786622)] 2021-10-25 09:35:27.252 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11783625, 11784464, 'FBtr0082531_exon_4') contains intron (11784092, 11784164) 2021-10-25 09:35:27.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082531_exon_4'] 2021-10-25 09:35:27.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15011321, 15011388), (15011582, 15011642), (15012107, 15012173), (15012515, 15012616), (15013975, 15014031), (15015333, 15015408), (15015890, 15015954), (15017941, 15018122), (15018738, 15018811), (15018925, 15051857), (15051993, 15052056), (15052159, 15052220), (15052368, 15052427), (15054975, 15055038), (15055317, 15055370), (15056418, 15056476), (15057036, 15057099), (15057239, 15057301), (15058001, 15058064), (15059184, 15059350), (15059737, 15059932), (15061043, 15063021)] 2021-10-25 09:35:27.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7655505, 7655570), (7655736, 7655793), (7655891, 7655943), (7656100, 7656155), (7656415, 7656471)] 2021-10-25 09:35:27.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034295: ['FBtr0086808'] 2021-10-25 09:35:27.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034295 has a single transcript. 2021-10-25 09:35:27.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034296: ['FBtr0086807'] 2021-10-25 09:35:27.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034296 has a single transcript. 2021-10-25 09:35:27.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034299: ['FBtr0086787', 'FBtr0329995'] 2021-10-25 09:35:27.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050493: ['FBtr0088925'] 2021-10-25 09:35:27.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050493 has a single transcript. 2021-10-25 09:35:27.316 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263351: ['FBtr0084252', 'FBtr0084253', 'FBtr0301866'] 2021-10-25 09:35:27.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050495: ['FBtr0088920', 'FBtr0336998'] 2021-10-25 09:35:27.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030603: ['FBtr0073958', 'FBtr0073959'] 2021-10-25 09:35:27.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037950: ['FBtr0082470', 'FBtr0082471', 'FBtr0082472', 'FBtr0301826'] 2021-10-25 09:35:27.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005613: ['FBtr0087576'] 2021-10-25 09:35:27.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005613 has a single transcript. 2021-10-25 09:35:27.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18094099, 18094164), (18094531, 18094583), (18094721, 18094790)] 2021-10-25 09:35:27.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7657298, 7657411), (7657675, 7657733), (7658150, 7658219), (7658162, 7658219)] 2021-10-25 09:35:27.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005614: ['FBtr0088471', 'FBtr0088473', 'FBtr0301662'] 2021-10-25 09:35:27.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15044283, 15048878), (15049265, 15049760), (15050138, 15050199), (15050359, 15050414)] 2021-10-25 09:35:27.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22462530, 22462590), (22462779, 22462847), (22463286, 22463342), (22464125, 22464174)] 2021-10-25 09:35:27.383 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22463342, 22464603, 'FBtr0084252_exon_4') contains intron (22464125, 22464174) 2021-10-25 09:35:27.383 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22462454, 22462779, 'FBtr0084253_exon_1') contains intron (22462530, 22462590) 2021-10-25 09:35:27.383 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22463342, 22464603, 'FBtr0084253_exon_3') contains intron (22464125, 22464174) 2021-10-25 09:35:27.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22462454, 22462779, 'FBtr0301866_exon_1') contains intron (22462530, 22462590) 2021-10-25 09:35:27.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084252_exon_4', 'FBtr0084253_exon_1', 'FBtr0084253_exon_3', 'FBtr0301866_exon_1'] 2021-10-25 09:35:27.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11787286, 11787376), (11787694, 11787764), (11787948, 11788021), (11788331, 11788463), (11788331, 11788445), (11788580, 11788641), (11789021, 11789085), (11789021, 11789073)] 2021-10-25 09:35:27.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11788021, 11788580, 'FBtr0082472_exon_3') contains intron (11788331, 11788463) 2021-10-25 09:35:27.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082472_exon_3'] 2021-10-25 09:35:27.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050496: ['FBtr0088926'] 2021-10-25 09:35:27.424 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050496 has a single transcript. 2021-10-25 09:35:27.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030605: ['FBtr0073960', 'FBtr0340424', 'FBtr0340425'] 2021-10-25 09:35:27.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050497: ['FBtr0088932', 'FBtr0088933', 'FBtr0088934', 'FBtr0331966'] 2021-10-25 09:35:27.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034300: ['FBtr0086732', 'FBtr0113092', 'FBtr0329994', 'FBtr0346952'] 2021-10-25 09:35:27.440 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9753839, 9755613), (9753852, 9755613), (9753977, 9755613), (9755759, 9756037), (9756183, 9759776), (9760014, 9761411), (9761554, 9761615), (9761988, 9762041), (9762276, 9762722), (9762996, 9763057), (9763450, 9763529), (9763725, 9763788), (9763953, 9764101), (9764321, 9764376), (9764713, 9764772)] 2021-10-25 09:35:27.441 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.441 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263352: ['FBtr0114592', 'FBtr0076661', 'FBtr0308954', 'FBtr0332984', 'FBtr0345595'] 2021-10-25 09:35:27.501 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15063983, 15064048)] 2021-10-25 09:35:27.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7741920, 7778474), (7741920, 7758034), (7741920, 7742007), (7741920, 7744879), (7779885, 7781726)] 2021-10-25 09:35:27.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18095223, 18096281), (18095835, 18095893), (18096058, 18096281), (18096478, 18096541), (18096987, 18097047), (18096999, 18097047), (18099605, 18099674)] 2021-10-25 09:35:27.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.530 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005616: ['FBtr0077570', 'FBtr0077571'] 2021-10-25 09:35:27.546 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329994': ['FBtr0346952']} 2021-10-25 09:35:27.546 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346952']] 2021-10-25 09:35:27.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037955: ['FBtr0082519', 'FBtr0082520', 'FBtr0082521', 'FBtr0082522'] 2021-10-25 09:35:27.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3463654, 3463706), (3465918, 3466051)] 2021-10-25 09:35:27.585 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3463706, 3466112, 'FBtr0077571_exon_1') contains intron (3465918, 3466051) 2021-10-25 09:35:27.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077571_exon_1'] 2021-10-25 09:35:27.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030607: ['FBtr0073961'] 2021-10-25 09:35:27.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030607 has a single transcript. 2021-10-25 09:35:27.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8434485, 8434549), (8434727, 8434783), (8435731, 8435790), (8435960, 8436021), (8436175, 8436245), (8436689, 8436764), (8436710, 8436764), (8436972, 8437038), (8437433, 8437507), (8438055, 8438192), (8441718, 8442332), (8441718, 8442206)] 2021-10-25 09:35:27.607 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8436245, 8436972, 'FBtr0114592_exon_4') contains intron (8436689, 8436764) 2021-10-25 09:35:27.608 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8436245, 8436972, 'FBtr0332984_exon_4') contains intron (8436689, 8436764) 2021-10-25 09:35:27.608 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8436245, 8436972, 'FBtr0345595_exon_4') contains intron (8436689, 8436764) 2021-10-25 09:35:27.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114592_exon_4', 'FBtr0332984_exon_4', 'FBtr0345595_exon_4'] 2021-10-25 09:35:27.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030608: ['FBtr0110968', 'FBtr0073967', 'FBtr0340427', 'FBtr0340428', 'FBtr0346060'] 2021-10-25 09:35:27.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034301: ['FBtr0086785', 'FBtr0330001'] 2021-10-25 09:35:27.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005617: ['FBtr0081130', 'FBtr0343118'] 2021-10-25 09:35:27.655 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11821220, 11821279), (11821819, 11821906), (11821819, 11822191), (11821819, 11822422), (11822117, 11822346)] 2021-10-25 09:35:27.655 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11821279, 11822077, 'FBtr0082521_exon_1') contains intron (11821819, 11821906) 2021-10-25 09:35:27.656 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082521_exon_1'] 2021-10-25 09:35:27.656 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050499: ['FBtr0088954', 'FBtr0310025'] 2021-10-25 09:35:27.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18102179, 18102236), (18102372, 18104000), (18103806, 18104000), (18104938, 18105083), (18105310, 18108143)] 2021-10-25 09:35:27.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.686 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18687126, 18687186)] 2021-10-25 09:35:27.687 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.687 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7564857, 7565057), (7565240, 7565298)] 2021-10-25 09:35:27.708 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15069620, 15069688), (15072648, 15073936), (15072648, 15072785), (15072648, 15073340), (15072967, 15073936), (15072967, 15073340), (15073391, 15073936), (15074374, 15075747)] 2021-10-25 09:35:27.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.724 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034304: ['FBtr0086780', 'FBtr0329999', 'FBtr0330000'] 2021-10-25 09:35:27.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005619: ['FBtr0088333', 'FBtr0331923', 'FBtr0331924', 'FBtr0345474'] 2021-10-25 09:35:27.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050502: ['FBtr0300959'] 2021-10-25 09:35:27.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050502 has a single transcript. 2021-10-25 09:35:27.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050503: ['FBtr0089003', 'FBtr0299802'] 2021-10-25 09:35:27.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037956: ['FBtr0082517', 'FBtr0299594'] 2021-10-25 09:35:27.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18149166, 18149421)] 2021-10-25 09:35:27.812 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18148463, 18151410, 'FBtr0086780_exon_1') contains intron (18149166, 18149421) 2021-10-25 09:35:27.813 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18148463, 18151410, 'FBtr0330000_exon_1') contains intron (18149166, 18149421) 2021-10-25 09:35:27.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086780_exon_1', 'FBtr0330000_exon_1'] 2021-10-25 09:35:27.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263353: ['FBtr0308953', 'FBtr0113195'] 2021-10-25 09:35:27.822 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086780': ['FBtr0330000']} 2021-10-25 09:35:27.822 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330000']] 2021-10-25 09:35:27.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11824951, 11838165), (11838230, 11858686), (11838230, 11868794), (11858755, 11868794)] 2021-10-25 09:35:27.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.829 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7444285, 7444348), (7445517, 7445581)] 2021-10-25 09:35:27.831 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.831 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.841 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10238475, 10240893), (10239886, 10240893), (10241124, 10241670), (10242249, 10242470), (10242580, 10242742), (10242796, 10243153), (10243847, 10244162), (10244308, 10244362), (10244591, 10244875), (10244604, 10244875)] 2021-10-25 09:35:27.842 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.842 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5803264, 5806220), (5806268, 5806997), (5807387, 5807817)] 2021-10-25 09:35:27.860 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.860 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034307: ['FBtr0086745'] 2021-10-25 09:35:27.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034307 has a single transcript. 2021-10-25 09:35:27.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034308: ['FBtr0086746', 'FBtr0345416'] 2021-10-25 09:35:27.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037958: ['FBtr0082516'] 2021-10-25 09:35:27.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037958 has a single transcript. 2021-10-25 09:35:27.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050506: ['FBtr0088145'] 2021-10-25 09:35:27.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050506 has a single transcript. 2021-10-25 09:35:27.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037960: ['FBtr0082515', 'FBtr0344288'] 2021-10-25 09:35:27.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0050509: ['FBtr0087665'] 2021-10-25 09:35:27.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0050509 has a single transcript. 2021-10-25 09:35:27.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051002: ['FBtr0085813'] 2021-10-25 09:35:27.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051002 has a single transcript. 2021-10-25 09:35:27.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263354: ['FBtr0347400', 'FBtr0303440', 'FBtr0308949', 'FBtr0347401'] 2021-10-25 09:35:27.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030610: ['FBtr0073966'] 2021-10-25 09:35:27.929 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030610 has a single transcript. 2021-10-25 09:35:27.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051004: ['FBtr0085779', 'FBtr0085780', 'FBtr0300960', 'FBtr0300961', 'FBtr0344066'] 2021-10-25 09:35:27.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18161875, 18161951), (18162138, 18162206), (18162328, 18162851)] 2021-10-25 09:35:27.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.940 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030611: ['FBtr0073965'] 2021-10-25 09:35:27.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030611 has a single transcript. 2021-10-25 09:35:27.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11884321, 11884382), (11884883, 11884941), (11884886, 11884941), (11885123, 11885180), (11885351, 11885414), (11885539, 11886582)] 2021-10-25 09:35:27.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030612: ['FBtr0073964'] 2021-10-25 09:35:27.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030612 has a single transcript. 2021-10-25 09:35:27.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:27.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:27.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030613: ['FBtr0307207', 'FBtr0307208', 'FBtr0307209', 'FBtr0307210', 'FBtr0330400', 'FBtr0330401', 'FBtr0452146', 'FBtr0452147', 'FBtr0452148', 'FBtr0346798'] 2021-10-25 09:35:28.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034310: ['FBtr0086775'] 2021-10-25 09:35:28.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034310 has a single transcript. 2021-10-25 09:35:28.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005624: ['FBtr0087798', 'FBtr0345196', 'FBtr0345375'] 2021-10-25 09:35:28.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037962: ['FBtr0082514'] 2021-10-25 09:35:28.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037962 has a single transcript. 2021-10-25 09:35:28.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034312: ['FBtr0086749', 'FBtr0332853'] 2021-10-25 09:35:28.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13415776, 13422991), (13423345, 13446514), (13446711, 13473805), (13462200, 13483446), (13476433, 13496590), (13485249, 13496590), (13485249, 13486917), (13486977, 13496590), (13496698, 13497238), (13497437, 13497501), (13497680, 13497740), (13497900, 13497958)] 2021-10-25 09:35:28.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037963: ['FBtr0082513'] 2021-10-25 09:35:28.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037963 has a single transcript. 2021-10-25 09:35:28.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037964: ['FBtr0082478'] 2021-10-25 09:35:28.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037964 has a single transcript. 2021-10-25 09:35:28.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037970: ['FBtr0334154', 'FBtr0082485'] 2021-10-25 09:35:28.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31178760, 31181033), (31180389, 31180458), (31180509, 31180578), (31180818, 31181033), (31181221, 31181299), (31181718, 31181784), (31182529, 31182614), (31182773, 31182949), (31183072, 31184217), (31184812, 31184925), (31185094, 31185645), (31185783, 31185855), (31186033, 31191321), (31191509, 31191598), (31191834, 31195057), (31195506, 31195716), (31195509, 31195716)] 2021-10-25 09:35:28.047 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31180458, 31180818, 'FBtr0300961_exon_14') contains intron (31180509, 31180578) 2021-10-25 09:35:28.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300961_exon_14'] 2021-10-25 09:35:28.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:28.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12970181, 12970321), (12970525, 12974503), (12974594, 12977316), (12978221, 12980047)] 2021-10-25 09:35:28.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.078 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11971831, 11971893), (11972028, 11972099), (11972028, 11972083)] 2021-10-25 09:35:28.078 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.079 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034313: ['FBtr0086772'] 2021-10-25 09:35:28.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034313 has a single transcript. 2021-10-25 09:35:28.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034314: ['FBtr0086750', 'FBtr0332852'] 2021-10-25 09:35:28.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037972: ['FBtr0082507', 'FBtr0335438'] 2021-10-25 09:35:28.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005626: ['FBtr0076956', 'FBtr0076957', 'FBtr0345585'] 2021-10-25 09:35:28.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18180837, 18180896), (18181112, 18181170), (18181524, 18181584), (18181642, 18181697), (18181817, 18181873), (18181817, 18181876), (18182077, 18182139)] 2021-10-25 09:35:28.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11975313, 11975927), (11975313, 11975423), (11975714, 11976098), (11976043, 11976098), (11976495, 11976988)] 2021-10-25 09:35:28.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.179 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263355: ['FBtr0330203', 'FBtr0330204', 'FBtr0308895', 'FBtr0273378', 'FBtr0330661'] 2021-10-25 09:35:28.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15089961, 15093237), (15093375, 15093555), (15093968, 15094069), (15093968, 15094093), (15093968, 15094102), (15094613, 15094666), (15095028, 15095086), (15095213, 15096862), (15095213, 15097455), (15096895, 15097455), (15097550, 15097627), (15098765, 15098833), (15099037, 15099812), (15099037, 15099248), (15099299, 15099812), (15100182, 15100242), (15100628, 15100689), (15101172, 15101599), (15101172, 15102012), (15101695, 15102012), (15102270, 15102328), (15102568, 15102632), (15102905, 15102976), (15103144, 15109696), (15103144, 15106440), (15106449, 15109696), (15109769, 15109846), (15109893, 15110463), (15109893, 15111067), (15110670, 15111067)] 2021-10-25 09:35:28.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034315: ['FBtr0086771'] 2021-10-25 09:35:28.236 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034315 has a single transcript. 2021-10-25 09:35:28.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037973: ['FBtr0082506'] 2021-10-25 09:35:28.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6715368, 6715707), (6715834, 6716129), (6716949, 6717333), (6716949, 6717903), (6717426, 6717552), (6717672, 6717903), (6718015, 6719004)] 2021-10-25 09:35:28.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037973 has a single transcript. 2021-10-25 09:35:28.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034317: ['FBtr0347601'] 2021-10-25 09:35:28.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034317 has a single transcript. 2021-10-25 09:35:28.245 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330401': ['FBtr0346798']} 2021-10-25 09:35:28.245 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346798']] 2021-10-25 09:35:28.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037974: ['FBtr0306697', 'FBtr0335436'] 2021-10-25 09:35:28.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034318: ['FBtr0086752'] 2021-10-25 09:35:28.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034318 has a single transcript. 2021-10-25 09:35:28.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051005: ['FBtr0085769', 'FBtr0345211'] 2021-10-25 09:35:28.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034321: ['FBtr0086756', 'FBtr0086757', 'FBtr0301546', 'FBtr0340332'] 2021-10-25 09:35:28.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20427473, 20431923), (20429161, 20431923), (20432729, 20441056), (20441111, 20441164), (20441246, 20441641)] 2021-10-25 09:35:28.293 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11980854, 11981011), (11981550, 11981605), (11982429, 11982508)] 2021-10-25 09:35:28.294 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.294 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31237449, 31237967), (31238162, 31238352), (31238484, 31240991), (31241081, 31241634), (31241776, 31242170), (31242310, 31242597), (31242774, 31251681)] 2021-10-25 09:35:28.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.307 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330203': ['FBtr0330204', 'FBtr0273378']} 2021-10-25 09:35:28.307 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330204', 'FBtr0273378']] 2021-10-25 09:35:28.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005631: ['FBtr0071922', 'FBtr0343013'] 2021-10-25 09:35:28.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037975: ['FBtr0082504'] 2021-10-25 09:35:28.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037975 has a single transcript. 2021-10-25 09:35:28.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18289214, 18293806), (18289274, 18293826), (18293949, 18294011), (18294164, 18294258)] 2021-10-25 09:35:28.352 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.352 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037976: ['FBtr0082488', 'FBtr0335435'] 2021-10-25 09:35:28.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051007: ['FBtr0085747'] 2021-10-25 09:35:28.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051007 has a single transcript. 2021-10-25 09:35:28.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051008: ['FBtr0085748'] 2021-10-25 09:35:28.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051008 has a single transcript. 2021-10-25 09:35:28.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051010: ['FBtr0085725', 'FBtr0335453'] 2021-10-25 09:35:28.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22695312, 22695387), (22695719, 22695776), (22696009, 22696071), (22696363, 22696418), (22696693, 22696751), (22696950, 22697014), (22697107, 22697165), (22697336, 22697401), (22697483, 22697544), (22697705, 22697771), (22697854, 22697911), (22698391, 22698451), (22698905, 22698965), (22699084, 22699195), (22699376, 22699612), (22699734, 22699801), (22700034, 22700196), (22700034, 22700877)] 2021-10-25 09:35:28.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.386 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263376: ['FBtr0309057'] 2021-10-25 09:35:28.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263376 has a single transcript. 2021-10-25 09:35:28.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263377: ['FBtr0309058'] 2021-10-25 09:35:28.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263377 has a single transcript. 2021-10-25 09:35:28.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11994755, 11994963), (11995168, 11995371), (11995192, 11995371), (11996063, 12005357), (11996066, 12005357)] 2021-10-25 09:35:28.408 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.408 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263378: ['FBtr0309059'] 2021-10-25 09:35:28.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263378 has a single transcript. 2021-10-25 09:35:28.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263379: ['FBtr0309061'] 2021-10-25 09:35:28.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263379 has a single transcript. 2021-10-25 09:35:28.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30705989, 30706054)] 2021-10-25 09:35:28.430 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30704761, 30706121, 'FBtr0335453_exon_1') contains intron (30705989, 30706054) 2021-10-25 09:35:28.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335453_exon_1'] 2021-10-25 09:35:28.430 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263380: ['FBtr0309065', 'FBtr0309066'] 2021-10-25 09:35:28.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005632: ['FBtr0085843', 'FBtr0085844', 'FBtr0307547', 'FBtr0307548', 'FBtr0307550', 'FBtr0339188', 'FBtr0339189'] 2021-10-25 09:35:28.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037978: ['FBtr0082556', 'FBtr0082557', 'FBtr0335434'] 2021-10-25 09:35:28.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051013: ['FBtr0085671'] 2021-10-25 09:35:28.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051013 has a single transcript. 2021-10-25 09:35:28.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14977388, 14977480)] 2021-10-25 09:35:28.485 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14976944, 14977631, 'FBtr0309065_exon_1') contains intron (14977388, 14977480) 2021-10-25 09:35:28.485 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309065_exon_1'] 2021-10-25 09:35:28.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051014: ['FBtr0085686'] 2021-10-25 09:35:28.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051014 has a single transcript. 2021-10-25 09:35:28.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034322: ['FBtr0086758'] 2021-10-25 09:35:28.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034322 has a single transcript. 2021-10-25 09:35:28.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051015: ['FBtr0085670'] 2021-10-25 09:35:28.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051015 has a single transcript. 2021-10-25 09:35:28.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034323: ['FBtr0086759'] 2021-10-25 09:35:28.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034323 has a single transcript. 2021-10-25 09:35:28.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051016: ['FBtr0300962', 'FBtr0335440'] 2021-10-25 09:35:28.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034324: ['FBtr0086760'] 2021-10-25 09:35:28.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034324 has a single transcript. 2021-10-25 09:35:28.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034325: ['FBtr0307184', 'FBtr0340333'] 2021-10-25 09:35:28.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12007928, 12008362), (12008895, 12008968), (12009227, 12009289), (12010143, 12010241)] 2021-10-25 09:35:28.540 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12009289, 12010434, 'FBtr0082557_exon_1') contains intron (12010143, 12010241) 2021-10-25 09:35:28.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082557_exon_1'] 2021-10-25 09:35:28.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263381: ['FBtr0309067'] 2021-10-25 09:35:28.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263381 has a single transcript. 2021-10-25 09:35:28.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263382: ['FBtr0309068'] 2021-10-25 09:35:28.557 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263382 has a single transcript. 2021-10-25 09:35:28.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30606388, 30606437), (30606589, 30606642), (30606793, 30606853), (30607047, 30607102), (30607749, 30607811), (30607980, 30608046)] 2021-10-25 09:35:28.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.562 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263383: ['FBtr0309070'] 2021-10-25 09:35:28.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263383 has a single transcript. 2021-10-25 09:35:28.574 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18297870, 18298323), (18298265, 18298323), (18298476, 18298542)] 2021-10-25 09:35:28.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263384: ['FBtr0309071'] 2021-10-25 09:35:28.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263384 has a single transcript. 2021-10-25 09:35:28.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263385: ['FBtr0309072'] 2021-10-25 09:35:28.584 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263385 has a single transcript. 2021-10-25 09:35:28.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030614: ['FBtr0074029'] 2021-10-25 09:35:28.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030614 has a single transcript. 2021-10-25 09:35:28.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263386: ['FBtr0309073'] 2021-10-25 09:35:28.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263386 has a single transcript. 2021-10-25 09:35:28.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030615: ['FBtr0074028'] 2021-10-25 09:35:28.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030615 has a single transcript. 2021-10-25 09:35:28.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263387: ['FBtr0309074'] 2021-10-25 09:35:28.600 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263387 has a single transcript. 2021-10-25 09:35:28.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030616: ['FBtr0074027', 'FBtr0330403'] 2021-10-25 09:35:28.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263388: ['FBtr0344587'] 2021-10-25 09:35:28.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263388 has a single transcript. 2021-10-25 09:35:28.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263389: ['FBtr0309077'] 2021-10-25 09:35:28.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263389 has a single transcript. 2021-10-25 09:35:28.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051017: ['FBtr0085667'] 2021-10-25 09:35:28.625 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051017 has a single transcript. 2021-10-25 09:35:28.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263390: ['FBtr0309100', 'FBtr0309101'] 2021-10-25 09:35:28.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31777182, 31778171), (31777437, 31778171), (31777564, 31778171), (31777564, 31777637), (31777751, 31778171), (31778758, 31779359), (31779508, 31779562), (31780776, 31780902), (31782816, 31782918), (31784284, 31784342), (31784766, 31784831), (31785147, 31785214), (31785368, 31785431), (31785582, 31785644), (31785953, 31786016), (31786128, 31786188), (31786298, 31786357), (31786709, 31786767), (31787027, 31787146), (31787723, 31787801), (31787738, 31787801), (31788197, 31788659), (31788197, 31789496), (31788844, 31789496)] 2021-10-25 09:35:28.634 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.634 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051019: ['FBtr0085665', 'FBtr0335439'] 2021-10-25 09:35:28.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037979: ['FBtr0113224'] 2021-10-25 09:35:28.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034326: ['FBtr0307185'] 2021-10-25 09:35:28.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037979 has a single transcript. 2021-10-25 09:35:28.641 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034326 has a single transcript. 2021-10-25 09:35:28.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034327: ['FBtr0307186', 'FBtr0110803'] 2021-10-25 09:35:28.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037980: ['FBtr0082555', 'FBtr0335433'] 2021-10-25 09:35:28.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15138913, 15138978), (15139114, 15139251)] 2021-10-25 09:35:28.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.671 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22981845, 22982592), (22982694, 22983023), (22983167, 22983878), (22984067, 22986112), (22986219, 22986309), (22986485, 22986562), (22986745, 22986803), (22987091, 22991136), (22991551, 22997513), (22991551, 22993390), (22997783, 22998164)] 2021-10-25 09:35:28.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18303514, 18303591)] 2021-10-25 09:35:28.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30597064, 30597263), (30597829, 30597882), (30598257, 30598326), (30598642, 30598703)] 2021-10-25 09:35:28.691 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18302944, 18303977, 'FBtr0307186_exon_1') contains intron (18303514, 18303591) 2021-10-25 09:35:28.692 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30597882, 30598642, 'FBtr0085665_exon_3') contains intron (30598257, 30598326) 2021-10-25 09:35:28.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307186_exon_1'] 2021-10-25 09:35:28.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085665_exon_3'] 2021-10-25 09:35:28.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12015399, 12015463), (12015868, 12015927), (12016482, 12016551)] 2021-10-25 09:35:28.695 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.695 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030617: ['FBtr0074026', 'FBtr0112984', 'FBtr0340410', 'FBtr0330402'] 2021-10-25 09:35:28.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051021: ['FBtr0300983'] 2021-10-25 09:35:28.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051021 has a single transcript. 2021-10-25 09:35:28.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034328: ['FBtr0086729'] 2021-10-25 09:35:28.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034328 has a single transcript. 2021-10-25 09:35:28.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263391: ['FBtr0309102', 'FBtr0309103', 'FBtr0309104', 'FBtr0309105', 'FBtr0309106', 'FBtr0309107', 'FBtr0309108', 'FBtr0309109', 'FBtr0309110', 'FBtr0309111', 'FBtr0309112', 'FBtr0309113', 'FBtr0309114', 'FBtr0309115', 'FBtr0340491'] 2021-10-25 09:35:28.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037981: ['FBtr0082537'] 2021-10-25 09:35:28.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037981 has a single transcript. 2021-10-25 09:35:28.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051023: ['FBtr0085636'] 2021-10-25 09:35:28.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051023 has a single transcript. 2021-10-25 09:35:28.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034329: ['FBtr0086662'] 2021-10-25 09:35:28.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034329 has a single transcript. 2021-10-25 09:35:28.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037985: ['FBtr0082538'] 2021-10-25 09:35:28.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037985 has a single transcript. 2021-10-25 09:35:28.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034330: ['FBtr0086663'] 2021-10-25 09:35:28.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034330 has a single transcript. 2021-10-25 09:35:28.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051025: ['FBtr0085586', 'FBtr0085587'] 2021-10-25 09:35:28.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037986: ['FBtr0301722', 'FBtr0301723', 'FBtr0301724', 'FBtr0339639'] 2021-10-25 09:35:28.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034331: ['FBtr0086728', 'FBtr0300844'] 2021-10-25 09:35:28.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15141520, 15141611), (15141538, 15141611), (15141770, 15141896), (15141998, 15144250), (15141998, 15142723), (15143281, 15144250), (15144731, 15144878), (15145283, 15145356), (15145536, 15145635), (15146454, 15148068), (15148281, 15150691), (15150868, 15162554)] 2021-10-25 09:35:28.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.814 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30127849, 30127900), (30128099, 30128165), (30128328, 30128388)] 2021-10-25 09:35:28.815 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30127900, 30128328, 'FBtr0085586_exon_2') contains intron (30128099, 30128165) 2021-10-25 09:35:28.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085586_exon_2'] 2021-10-25 09:35:28.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18385458, 18385513)] 2021-10-25 09:35:28.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.823 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074026': ['FBtr0330402']} 2021-10-25 09:35:28.823 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330402']] 2021-10-25 09:35:28.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12040735, 12040793), (12040944, 12041008), (12040944, 12041003), (12041366, 12041444), (12041610, 12041664), (12041962, 12042016), (12042100, 12042162), (12042204, 12042386), (12042449, 12042531), (12042819, 12043086)] 2021-10-25 09:35:28.869 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12041664, 12042100, 'FBtr0301723_exon_5') contains intron (12041962, 12042016) 2021-10-25 09:35:28.870 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12041664, 12042100, 'FBtr0339639_exon_5') contains intron (12041962, 12042016) 2021-10-25 09:35:28.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301723_exon_5', 'FBtr0339639_exon_5'] 2021-10-25 09:35:28.871 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051028: ['FBtr0290050'] 2021-10-25 09:35:28.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051028 has a single transcript. 2021-10-25 09:35:28.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034335: ['FBtr0086669'] 2021-10-25 09:35:28.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034335 has a single transcript. 2021-10-25 09:35:28.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051029: ['FBtr0085585'] 2021-10-25 09:35:28.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051029 has a single transcript. 2021-10-25 09:35:28.889 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051030: ['FBtr0085579', 'FBtr0110834'] 2021-10-25 09:35:28.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034345: ['FBtr0086684', 'FBtr0086686', 'FBtr0086687', 'FBtr0086689', 'FBtr0086690', 'FBtr0301148', 'FBtr0301149', 'FBtr0340359', 'FBtr0306636', 'FBtr0306637'] 2021-10-25 09:35:28.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030620: ['FBtr0073999', 'FBtr0346086'] 2021-10-25 09:35:28.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30165119, 30165174), (30165977, 30166034)] 2021-10-25 09:35:28.938 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30164691, 30165977, 'FBtr0085579_exon_2') contains intron (30165119, 30165174) 2021-10-25 09:35:28.938 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085579_exon_2'] 2021-10-25 09:35:28.939 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005633: ['FBtr0074910', 'FBtr0332723'] 2021-10-25 09:35:28.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:28.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.985 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19990086, 19990148), (19990304, 19990370), (19990634, 19990851), (19990634, 19991148)] 2021-10-25 09:35:28.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:28.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:28.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051032: ['FBtr0085524'] 2021-10-25 09:35:28.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051032 has a single transcript. 2021-10-25 09:35:29.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051036: ['FBtr0085501', 'FBtr0345059'] 2021-10-25 09:35:29.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037987: ['FBtr0082553'] 2021-10-25 09:35:29.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037987 has a single transcript. 2021-10-25 09:35:29.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037988: ['FBtr0082552'] 2021-10-25 09:35:29.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037988 has a single transcript. 2021-10-25 09:35:29.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030622: ['FBtr0074024'] 2021-10-25 09:35:29.019 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030622 has a single transcript. 2021-10-25 09:35:29.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030623: ['FBtr0074023'] 2021-10-25 09:35:29.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030623 has a single transcript. 2021-10-25 09:35:29.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037989: ['FBtr0307015', 'FBtr0307016', 'FBtr0300351', 'FBtr0339643', 'FBtr0339644', 'FBtr0339645', 'FBtr0339646'] 2021-10-25 09:35:29.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030624: ['FBtr0074021', 'FBtr0074022'] 2021-10-25 09:35:29.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29908408, 29909149), (29909334, 29909393), (29909602, 29909659), (29910301, 29910446), (29910301, 29910443), (29910604, 29910668), (29910870, 29910940), (29911947, 29912221), (29912426, 29912483)] 2021-10-25 09:35:29.052 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005636: ['FBtr0072267', 'FBtr0330610', 'FBtr0330611', 'FBtr0330612'] 2021-10-25 09:35:29.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15271856, 15271986), (15271914, 15271986)] 2021-10-25 09:35:29.084 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.094 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19398799, 19399025), (19398805, 19399025), (19399093, 19406019), (19399093, 19407840), (19401355, 19407840), (19405424, 19407840), (19406088, 19407840), (19407156, 19407840), (19407912, 19407974), (19408055, 19408123), (19408418, 19408482), (19408593, 19409619), (19409743, 19409804), (19410516, 19410589), (19411073, 19411159), (19411271, 19418556), (19411271, 19424822), (19411271, 19411360), (19418605, 19424822), (19418605, 19423593), (19423797, 19424822), (19423797, 19424043)] 2021-10-25 09:35:29.096 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19411159, 19411361, 'FBtr0309105_exon_1') contains intron (19411271, 19411360) 2021-10-25 09:35:29.098 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19423593, 19424114, 'FBtr0309110_exon_1') contains intron (19423797, 19424043) 2021-10-25 09:35:29.098 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19423593, 19424114, 'FBtr0309111_exon_1') contains intron (19423797, 19424043) 2021-10-25 09:35:29.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309105_exon_1', 'FBtr0309110_exon_1', 'FBtr0309111_exon_1'] 2021-10-25 09:35:29.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051038: ['FBtr0085494', 'FBtr0085495', 'FBtr0085496', 'FBtr0085497', 'FBtr0085498', 'FBtr0333274', 'FBtr0333275'] 2021-10-25 09:35:29.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18421553, 18424126), (18421553, 18423868), (18423723, 18424126), (18423735, 18424126), (18423871, 18424126), (18423871, 18423968), (18424007, 18424126), (18424251, 18424325), (18424486, 18424606), (18424486, 18424871), (18424666, 18424871), (18425034, 18425963), (18425034, 18425339), (18425076, 18425339)] 2021-10-25 09:35:29.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.138 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24276131, 24284827), (24284755, 24284827), (24284762, 24284827), (24285074, 24288024), (24289349, 24289442), (24289622, 24289680), (24289806, 24289934)] 2021-10-25 09:35:29.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030625: ['FBtr0074001', 'FBtr0074002', 'FBtr0340433'] 2021-10-25 09:35:29.155 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072267': ['FBtr0330612']} 2021-10-25 09:35:29.155 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330612']] 2021-10-25 09:35:29.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15293893, 15294336), (15294266, 15294336)] 2021-10-25 09:35:29.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12069921, 12069984), (12070101, 12070159), (12070408, 12070499), (12070829, 12070885), (12071109, 12071167), (12071319, 12071381), (12071528, 12072285), (12071528, 12072327), (12072472, 12072543), (12072696, 12072759), (12073036, 12073097), (12073271, 12073325), (12073616, 12075173), (12073616, 12074458), (12073616, 12074203), (12074893, 12075173), (12075422, 12075490), (12075712, 12075778), (12076315, 12076373), (12076586, 12076683), (12076742, 12076905), (12076742, 12082574), (12077536, 12079680), (12082881, 12090237)] 2021-10-25 09:35:29.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005638: ['FBtr0072272', 'FBtr0339359'] 2021-10-25 09:35:29.283 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29877115, 29877926), (29877178, 29877926), (29879810, 29897299), (29895093, 29896697), (29895423, 29896697), (29897205, 29897299), (29897229, 29897299), (29897645, 29902183)] 2021-10-25 09:35:29.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29877058, 29879810, 'FBtr0085496_exon_1') contains intron (29877115, 29877926) 2021-10-25 09:35:29.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085496_exon_1'] 2021-10-25 09:35:29.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:29.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030628: ['FBtr0074020'] 2021-10-25 09:35:29.313 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030628 has a single transcript. 2021-10-25 09:35:29.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030629: ['FBtr0074019'] 2021-10-25 09:35:29.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030629 has a single transcript. 2021-10-25 09:35:29.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030630: ['FBtr0074018'] 2021-10-25 09:35:29.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030630 has a single transcript. 2021-10-25 09:35:29.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030631: ['FBtr0074011'] 2021-10-25 09:35:29.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030631 has a single transcript. 2021-10-25 09:35:29.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030634: ['FBtr0074012', 'FBtr0074014', 'FBtr0343351'] 2021-10-25 09:35:29.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005640: ['FBtr0110920', 'FBtr0110921', 'FBtr0110922', 'FBtr0110923', 'FBtr0110924', 'FBtr0110925', 'FBtr0073131', 'FBtr0073132', 'FBtr0073133', 'FBtr0073134', 'FBtr0073135', 'FBtr0302598', 'FBtr0330068', 'FBtr0301948'] 2021-10-25 09:35:29.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15381666, 15381801), (15382170, 15382228), (15382355, 15382545), (15382698, 15384910), (15382698, 15383849)] 2021-10-25 09:35:29.415 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15382545, 15385441, 'FBtr0343351_exon_1') contains intron (15382698, 15384910) 2021-10-25 09:35:29.416 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343351_exon_1'] 2021-10-25 09:35:29.416 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030638: ['FBtr0074031'] 2021-10-25 09:35:29.518 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030638 has a single transcript. 2021-10-25 09:35:29.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037992: ['FBtr0082550', 'FBtr0308292', 'FBtr0308293', 'FBtr0308294'] 2021-10-25 09:35:29.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030640: ['FBtr0074034', 'FBtr0308830'] 2021-10-25 09:35:29.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034346: ['FBtr0086691'] 2021-10-25 09:35:29.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034346 has a single transcript. 2021-10-25 09:35:29.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034350: ['FBtr0086694', 'FBtr0299805'] 2021-10-25 09:35:29.569 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15464425, 15465730), (15465993, 15466068), (15466124, 15466218), (15466476, 15466542)] 2021-10-25 09:35:29.570 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.570 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051040: ['FBtr0085509'] 2021-10-25 09:35:29.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051040 has a single transcript. 2021-10-25 09:35:29.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051041: ['FBtr0085470'] 2021-10-25 09:35:29.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051041 has a single transcript. 2021-10-25 09:35:29.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051044: ['FBtr0085391', 'FBtr0303426', 'FBtr0303427'] 2021-10-25 09:35:29.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18446705, 18446763), (18446950, 18447017), (18447753, 18447807), (18447884, 18447940), (18448050, 18448100), (18448871, 18448926)] 2021-10-25 09:35:29.606 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.607 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12121887, 12122170), (12122421, 12123292), (12122421, 12122955), (12123039, 12123292), (12123378, 12123462), (12123861, 12127870), (12123864, 12127870), (12127953, 12128023), (12127962, 12128023)] 2021-10-25 09:35:29.633 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12127870, 12128201, 'FBtr0082550_exon_1') contains intron (12127953, 12128023) 2021-10-25 09:35:29.633 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12127870, 12128201, 'FBtr0308292_exon_1') contains intron (12127953, 12128023) 2021-10-25 09:35:29.634 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082550_exon_1', 'FBtr0308292_exon_1'] 2021-10-25 09:35:29.634 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030641: ['FBtr0074032', 'FBtr0074033', 'FBtr0343983', 'FBtr0343984', 'FBtr0345130'] 2021-10-25 09:35:29.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034351: ['FBtr0086696'] 2021-10-25 09:35:29.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034351 has a single transcript. 2021-10-25 09:35:29.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29214959, 29215014), (29215181, 29218464), (29217852, 29218464)] 2021-10-25 09:35:29.661 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29214561, 29219667, 'FBtr0085391_exon_1') contains intron (29214959, 29215014) 2021-10-25 09:35:29.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085391_exon_1'] 2021-10-25 09:35:29.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034352: ['FBtr0086722'] 2021-10-25 09:35:29.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034352 has a single transcript. 2021-10-25 09:35:29.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034354: ['FBtr0086697', 'FBtr0345628'] 2021-10-25 09:35:29.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3515934, 3516528), (3516828, 3552786), (3543707, 3543938), (3543707, 3545798), (3543707, 3552786), (3543993, 3546072), (3545417, 3545798), (3546131, 3552786), (3552864, 3578288), (3578480, 3588041), (3578480, 3593328), (3588080, 3593328), (3593546, 3594650), (3594742, 3598064), (3598239, 3598359), (3598621, 3600012), (3600225, 3600311), (3600491, 3607501)] 2021-10-25 09:35:29.684 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3515750, 3516828, 'FBtr0110920_exon_1') contains intron (3515934, 3516528) 2021-10-25 09:35:29.686 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3515750, 3516828, 'FBtr0073131_exon_1') contains intron (3515934, 3516528) 2021-10-25 09:35:29.688 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3515750, 3516828, 'FBtr0330068_exon_1') contains intron (3515934, 3516528) 2021-10-25 09:35:29.689 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3545317, 3546131, 'FBtr0301948_exon_1') contains intron (3545417, 3545798) 2021-10-25 09:35:29.689 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0110920_exon_1', 'FBtr0073131_exon_1', 'FBtr0330068_exon_1', 'FBtr0301948_exon_1'] 2021-10-25 09:35:29.689 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18503661, 18503740), (18503849, 18504245)] 2021-10-25 09:35:29.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.724 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.733 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073131': ['FBtr0330068']} 2021-10-25 09:35:29.733 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330068']] 2021-10-25 09:35:29.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15464425, 15465730), (15464737, 15465730), (15465471, 15465730), (15465993, 15466068), (15466124, 15466218), (15466476, 15466542)] 2021-10-25 09:35:29.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037993: ['FBtr0082549', 'FBtr0339647'] 2021-10-25 09:35:29.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051050: ['FBtr0085317', 'FBtr0336752'] 2021-10-25 09:35:29.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263392: ['FBtr0309117', 'FBtr0309118', 'FBtr0309119', 'FBtr0309120', 'FBtr0333880', 'FBtr0333881'] 2021-10-25 09:35:29.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034356: ['FBtr0086699', 'FBtr0113093'] 2021-10-25 09:35:29.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12140130, 12143422), (12143528, 12144136), (12144837, 12145236), (12145471, 12150372), (12150947, 12156108), (12156605, 12158533), (12156621, 12158533)] 2021-10-25 09:35:29.813 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28650330, 28650388)] 2021-10-25 09:35:29.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18527800, 18532671), (18532456, 18532671)] 2021-10-25 09:35:29.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037994: ['FBtr0082546'] 2021-10-25 09:35:29.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037994 has a single transcript. 2021-10-25 09:35:29.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051051: ['FBtr0085296', 'FBtr0337035'] 2021-10-25 09:35:29.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034360: ['FBtr0086705'] 2021-10-25 09:35:29.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034360 has a single transcript. 2021-10-25 09:35:29.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037995: ['FBtr0082545'] 2021-10-25 09:35:29.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037995 has a single transcript. 2021-10-25 09:35:29.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034361: ['FBtr0086714'] 2021-10-25 09:35:29.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034361 has a single transcript. 2021-10-25 09:35:29.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037996: ['FBtr0082625'] 2021-10-25 09:35:29.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037996 has a single transcript. 2021-10-25 09:35:29.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034362: ['FBtr0086706'] 2021-10-25 09:35:29.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034362 has a single transcript. 2021-10-25 09:35:29.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037997: ['FBtr0306051'] 2021-10-25 09:35:29.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037997 has a single transcript. 2021-10-25 09:35:29.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034363: ['FBtr0086707'] 2021-10-25 09:35:29.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034363 has a single transcript. 2021-10-25 09:35:29.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037998: ['FBtr0082624', 'FBtr0334596', 'FBtr0334597'] 2021-10-25 09:35:29.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034364: ['FBtr0086713', 'FBtr0307347', 'FBtr0307348', 'FBtr0307349'] 2021-10-25 09:35:29.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28519988, 28520050), (28520006, 28520050), (28520284, 28520355)] 2021-10-25 09:35:29.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.919 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2791277, 2791431), (2791945, 2792005), (2792169, 2792232), (2792437, 2792501), (2795034, 2796291), (2796678, 2851558), (2796678, 2820058), (2796681, 2851558), (2796681, 2820058), (2851696, 2864042), (2851696, 2869448), (2864060, 2869448), (2869589, 2869940), (2869757, 2869940), (2872750, 2878532)] 2021-10-25 09:35:29.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.923 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030642: ['FBtr0074076', 'FBtr0346184'] 2021-10-25 09:35:29.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051053: ['FBtr0085268'] 2021-10-25 09:35:29.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051053 has a single transcript. 2021-10-25 09:35:29.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12215953, 12216632), (12215953, 12216880), (12216686, 12216880), (12217546, 12217605), (12218663, 12218731), (12219414, 12219470)] 2021-10-25 09:35:29.975 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.976 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051054: ['FBtr0307118'] 2021-10-25 09:35:29.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051054 has a single transcript. 2021-10-25 09:35:29.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15467267, 15467352)] 2021-10-25 09:35:29.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:29.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:29.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051055: ['FBtr0085242', 'FBtr0085243', 'FBtr0085244'] 2021-10-25 09:35:30.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18617122, 18617199), (18617758, 18617831), (18617758, 18617878), (18617758, 18619157), (18617758, 18617977)] 2021-10-25 09:35:30.001 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.001 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030643: ['FBtr0074035'] 2021-10-25 09:35:30.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030643 has a single transcript. 2021-10-25 09:35:30.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030645: ['FBtr0074036'] 2021-10-25 09:35:30.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030645 has a single transcript. 2021-10-25 09:35:30.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030647: ['FBtr0074037', 'FBtr0344943'] 2021-10-25 09:35:30.064 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27686406, 27686466), (27686568, 27686938), (27687879, 27687942), (27688017, 27688072)] 2021-10-25 09:35:30.065 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27687942, 27688134, 'FBtr0085242_exon_1') contains intron (27688017, 27688072) 2021-10-25 09:35:30.065 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27686938, 27688134, 'FBtr0085243_exon_1') contains intron (27687879, 27687942) 2021-10-25 09:35:30.065 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27686938, 27688017, 'FBtr0085244_exon_2') contains intron (27687879, 27687942) 2021-10-25 09:35:30.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085242_exon_1', 'FBtr0085243_exon_1', 'FBtr0085244_exon_2'] 2021-10-25 09:35:30.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0037999: ['FBtr0082623'] 2021-10-25 09:35:30.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0037999 has a single transcript. 2021-10-25 09:35:30.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038000: ['FBtr0082559'] 2021-10-25 09:35:30.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038000 has a single transcript. 2021-10-25 09:35:30.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038001: ['FBtr0302311'] 2021-10-25 09:35:30.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038001 has a single transcript. 2021-10-25 09:35:30.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038002: ['FBtr0082621'] 2021-10-25 09:35:30.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038002 has a single transcript. 2021-10-25 09:35:30.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038003: ['FBtr0082560'] 2021-10-25 09:35:30.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038003 has a single transcript. 2021-10-25 09:35:30.111 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15476132, 15477876), (15480536, 15480633), (15480536, 15480612), (15480721, 15480949)] 2021-10-25 09:35:30.113 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.113 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038005: ['FBtr0082619'] 2021-10-25 09:35:30.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038005 has a single transcript. 2021-10-25 09:35:30.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038006: ['FBtr0308561'] 2021-10-25 09:35:30.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038006 has a single transcript. 2021-10-25 09:35:30.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038007: ['FBtr0082617'] 2021-10-25 09:35:30.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038007 has a single transcript. 2021-10-25 09:35:30.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034365: ['FBtr0086708'] 2021-10-25 09:35:30.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034365 has a single transcript. 2021-10-25 09:35:30.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038008: ['FBtr0082561'] 2021-10-25 09:35:30.158 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038008 has a single transcript. 2021-10-25 09:35:30.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034366: ['FBtr0086711', 'FBtr0086712'] 2021-10-25 09:35:30.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038009: ['FBtr0082565'] 2021-10-25 09:35:30.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038009 has a single transcript. 2021-10-25 09:35:30.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051064: ['FBtr0085124', 'FBtr0085125', 'FBtr0085126', 'FBtr0347560', 'FBtr0339248', 'FBtr0339249'] 2021-10-25 09:35:30.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038011: ['FBtr0082566'] 2021-10-25 09:35:30.182 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038011 has a single transcript. 2021-10-25 09:35:30.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263395: ['FBtr0086503', 'FBtr0086504', 'FBtr0340454', 'FBtr0340455', 'FBtr0340456'] 2021-10-25 09:35:30.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030648: ['FBtr0074039', 'FBtr0074040', 'FBtr0310060', 'FBtr0310061'] 2021-10-25 09:35:30.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038012: ['FBtr0082567'] 2021-10-25 09:35:30.193 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038012 has a single transcript. 2021-10-25 09:35:30.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038013: ['FBtr0082615', 'FBtr0082614'] 2021-10-25 09:35:30.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18620774, 18620838), (18620955, 18621038), (18621332, 18623004), (18623169, 18623229), (18623577, 18623638), (18623783, 18623914), (18624127, 18624184), (18624127, 18624762), (18624706, 18624762)] 2021-10-25 09:35:30.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12349364, 12349421), (12349680, 12349794), (12349982, 12350194), (12350310, 12350373), (12350465, 12350543)] 2021-10-25 09:35:30.254 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12350373, 12350644, 'FBtr0082615_exon_1') contains intron (12350465, 12350543) 2021-10-25 09:35:30.255 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082615_exon_1'] 2021-10-25 09:35:30.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005642: ['FBtr0085356'] 2021-10-25 09:35:30.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005642 has a single transcript. 2021-10-25 09:35:30.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005648: ['FBtr0088785', 'FBtr0088786'] 2021-10-25 09:35:30.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034368: ['FBtr0086661', 'FBtr0340394', 'FBtr0345423', 'FBtr0345424'] 2021-10-25 09:35:30.283 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15482537, 15483198), (15482537, 15483181), (15483420, 15485121), (15483420, 15484529), (15484892, 15485121), (15485268, 15485331)] 2021-10-25 09:35:30.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19178872, 19179498), (19179858, 19211855), (19212276, 19216420), (19216519, 19216742), (19217041, 19217756), (19217844, 19218130), (19218194, 19223239), (19218194, 19220743), (19218194, 19224052), (19218194, 19218575), (19218638, 19220743), (19220782, 19223239), (19220782, 19224052), (19224386, 19224449), (19224576, 19224640), (19224994, 19225059), (19225503, 19225564), (19225786, 19225846), (19225973, 19226039)] 2021-10-25 09:35:30.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038014: ['FBtr0082613'] 2021-10-25 09:35:30.324 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038014 has a single transcript. 2021-10-25 09:35:30.328 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8131723, 8131920), (8132132, 8132389), (8132791, 8132941), (8133075, 8133140), (8133208, 8133614)] 2021-10-25 09:35:30.329 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.329 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27230444, 27230567), (27230665, 27232472), (27232108, 27232472), (27232199, 27232472), (27232875, 27232934), (27233185, 27233247), (27233681, 27237003), (27233681, 27238524), (27233681, 27236862), (27237846, 27237972)] 2021-10-25 09:35:30.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038016: ['FBtr0082611'] 2021-10-25 09:35:30.332 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038016 has a single transcript. 2021-10-25 09:35:30.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038017: ['FBtr0082568'] 2021-10-25 09:35:30.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038017 has a single transcript. 2021-10-25 09:35:30.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038018: ['FBtr0082610', 'FBtr0344388'] 2021-10-25 09:35:30.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18630276, 18630337), (18630568, 18630628), (18630938, 18630995), (18631078, 18631132), (18631630, 18631749), (18631635, 18631749)] 2021-10-25 09:35:30.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.388 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005649: ['FBtr0084591', 'FBtr0084592', 'FBtr0084594', 'FBtr0333200', 'FBtr0333201', 'FBtr0333202'] 2021-10-25 09:35:30.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:30.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030653: ['FBtr0074045', 'FBtr0339691'] 2021-10-25 09:35:30.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038020: ['FBtr0082608', 'FBtr0344263'] 2021-10-25 09:35:30.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:30.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12366911, 12367538), (12366911, 12367527)] 2021-10-25 09:35:30.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034371: ['FBtr0086657', 'FBtr0086658', 'FBtr0301861', 'FBtr0301862'] 2021-10-25 09:35:30.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263396: ['FBtr0082857', 'FBtr0082855', 'FBtr0082854', 'FBtr0309094', 'FBtr0082856'] 2021-10-25 09:35:30.544 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24044127, 24044196), (24044145, 24044196), (24044290, 24044357), (24045266, 24045437), (24046488, 24047818), (24046491, 24047960), (24046491, 24046937), (24046491, 24047187), (24046491, 24048112), (24046491, 24047498)] 2021-10-25 09:35:30.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030654: ['FBtr0074072', 'FBtr0340349'] 2021-10-25 09:35:30.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038028: ['FBtr0082606', 'FBtr0344387'] 2021-10-25 09:35:30.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051065: ['FBtr0113383'] 2021-10-25 09:35:30.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051065 has a single transcript. 2021-10-25 09:35:30.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051068: ['FBtr0303569', 'FBtr0303570'] 2021-10-25 09:35:30.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15571485, 15571563)] 2021-10-25 09:35:30.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12382351, 12382420)] 2021-10-25 09:35:30.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18641193, 18641458), (18641572, 18641634), (18641796, 18641858), (18642067, 18642131), (18642314, 18642404), (18642762, 18658075), (18642762, 18652523), (18642762, 18658079)] 2021-10-25 09:35:30.618 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18640861, 18641572, 'FBtr0301861_exon_6') contains intron (18641193, 18641458) 2021-10-25 09:35:30.619 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18640861, 18641572, 'FBtr0301862_exon_6') contains intron (18641193, 18641458) 2021-10-25 09:35:30.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301861_exon_6', 'FBtr0301862_exon_6'] 2021-10-25 09:35:30.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27235437, 27235496), (27235861, 27235914), (27235861, 27235917), (27235984, 27236059), (27236166, 27236223)] 2021-10-25 09:35:30.653 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.653 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030655: ['FBtr0074071', 'FBtr0340348'] 2021-10-25 09:35:30.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13636304, 13636365), (13636525, 13636970), (13636525, 13642298), (13637078, 13642298), (13642427, 13642511), (13642755, 13642828), (13643103, 13643168), (13643209, 13644358), (13643209, 13645752), (13644570, 13645752)] 2021-10-25 09:35:30.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038029: ['FBtr0082576', 'FBtr0114565'] 2021-10-25 09:35:30.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15572445, 15572509), (15573232, 15573286)] 2021-10-25 09:35:30.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051070: ['FBtr0085086'] 2021-10-25 09:35:30.723 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051070 has a single transcript. 2021-10-25 09:35:30.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051071: ['FBtr0085087'] 2021-10-25 09:35:30.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051071 has a single transcript. 2021-10-25 09:35:30.734 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12383617, 12384399), (12384612, 12384679), (12384821, 12385210)] 2021-10-25 09:35:30.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051072: ['FBtr0085097', 'FBtr0085099', 'FBtr0300939', 'FBtr0334310'] 2021-10-25 09:35:30.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030657: ['FBtr0089702', 'FBtr0310052', 'FBtr0346182'] 2021-10-25 09:35:30.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034372: ['FBtr0086654', 'FBtr0086655', 'FBtr0340392'] 2021-10-25 09:35:30.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038032: ['FBtr0082603', 'FBtr0082604', 'FBtr0347002', 'FBtr0347003'] 2021-10-25 09:35:30.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005654: ['FBtr0087768', 'FBtr0087769'] 2021-10-25 09:35:30.826 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15577749, 15577810), (15577765, 15577810)] 2021-10-25 09:35:30.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.828 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.839 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13202952, 13203017), (13204255, 13204314), (13205118, 13205181), (13205400, 13205475), (13205716, 13205775), (13205925, 13205997), (13206123, 13206179), (13206324, 13206380)] 2021-10-25 09:35:30.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26843262, 26843444), (26843575, 26843747), (26843575, 26843654), (26843916, 26846941), (26847009, 26848660), (26848787, 26848850), (26849030, 26849402), (26849549, 26855572), (26855686, 26855842), (26856297, 26860843), (26860956, 26861021), (26861143, 26861200), (26861348, 26861407), (26861691, 26861769), (26861933, 26861990), (26862207, 26862479), (26862563, 26862636), (26862566, 26862636), (26862710, 26863050), (26862710, 26863074), (26862710, 26862772)] 2021-10-25 09:35:30.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18658648, 18658707), (18658856, 18658919), (18659930, 18659985), (18660124, 18660194), (18660604, 18660664), (18660625, 18661110)] 2021-10-25 09:35:30.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12391005, 12391083), (12391792, 12391847), (12392358, 12392458), (12392571, 12392826), (12394211, 12394270), (12394979, 12395075), (12395586, 12395710), (12395823, 12395893)] 2021-10-25 09:35:30.877 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12392458, 12394211, 'FBtr0082603_exon_5') contains intron (12392571, 12392826) 2021-10-25 09:35:30.878 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12392458, 12394211, 'FBtr0347002_exon_5') contains intron (12392571, 12392826) 2021-10-25 09:35:30.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082603_exon_5', 'FBtr0347002_exon_5'] 2021-10-25 09:35:30.878 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263397: ['FBtr0308837', 'FBtr0100370', 'FBtr0290109', 'FBtr0308835', 'FBtr0290111', 'FBtr0308834', 'FBtr0100372', 'FBtr0100369', 'FBtr0290292', 'FBtr0290110', 'FBtr0308836'] 2021-10-25 09:35:30.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005655: ['FBtr0086308', 'FBtr0086307'] 2021-10-25 09:35:30.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030658: ['FBtr0074046'] 2021-10-25 09:35:30.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030658 has a single transcript. 2021-10-25 09:35:30.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030659: ['FBtr0074066'] 2021-10-25 09:35:30.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030659 has a single transcript. 2021-10-25 09:35:30.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030660: ['FBtr0074047', 'FBtr0340344'] 2021-10-25 09:35:30.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20262553, 20262613)] 2021-10-25 09:35:30.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:30.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034377: ['FBtr0086605'] 2021-10-25 09:35:30.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034377 has a single transcript. 2021-10-25 09:35:30.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034379: ['FBtr0086607', 'FBtr0340389'] 2021-10-25 09:35:30.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15584198, 15584323), (15584639, 15584702)] 2021-10-25 09:35:30.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:30.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051075: ['FBtr0085080', 'FBtr0307506'] 2021-10-25 09:35:31.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18706200, 18706254), (18706928, 18707097), (18707015, 18707097), (18707292, 18707352)] 2021-10-25 09:35:31.012 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005658: ['FBtr0077054', 'FBtr0077055', 'FBtr0273355', 'FBtr0347000', 'FBtr0347001'] 2021-10-25 09:35:31.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26986369, 26986432), (26987004, 26987061), (26987162, 26987233), (26987338, 26987411), (26987338, 26988407)] 2021-10-25 09:35:31.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.052 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038033: ['FBtr0100525', 'FBtr0347004', 'FBtr0344386'] 2021-10-25 09:35:31.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030661: ['FBtr0074048'] 2021-10-25 09:35:31.062 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030661 has a single transcript. 2021-10-25 09:35:31.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034380: ['FBtr0086647'] 2021-10-25 09:35:31.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034380 has a single transcript. 2021-10-25 09:35:31.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030662: ['FBtr0074064', 'FBtr0340347'] 2021-10-25 09:35:31.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034381: ['FBtr0300863', 'FBtr0300864'] 2021-10-25 09:35:31.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051076: ['FBtr0307505'] 2021-10-25 09:35:31.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051076 has a single transcript. 2021-10-25 09:35:31.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051077: ['FBtr0301977'] 2021-10-25 09:35:31.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051077 has a single transcript. 2021-10-25 09:35:31.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15587006, 15587109), (15587523, 15589624), (15589931, 15590058), (15590953, 15592956)] 2021-10-25 09:35:31.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051080: ['FBtr0085032'] 2021-10-25 09:35:31.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051080 has a single transcript. 2021-10-25 09:35:31.132 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12391005, 12391083), (12391792, 12391847), (12392358, 12392458), (12394211, 12394270), (12394979, 12395075), (12395586, 12395710), (12395823, 12395893)] 2021-10-25 09:35:31.133 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.133 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18728018, 18728080), (18728181, 18728261), (18728438, 18728503), (18728746, 18728842), (18728786, 18728842), (18729032, 18729169), (18729544, 18729742)] 2021-10-25 09:35:31.134 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.134 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051081: ['FBtr0085033'] 2021-10-25 09:35:31.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051081 has a single transcript. 2021-10-25 09:35:31.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051084: ['FBtr0085007'] 2021-10-25 09:35:31.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051084 has a single transcript. 2021-10-25 09:35:31.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6098471, 6100468), (6100762, 6100934), (6101311, 6103624), (6103792, 6112370), (6112198, 6112370), (6112421, 6114293), (6114353, 6115954), (6116002, 6118958), (6119148, 6121493), (6121702, 6121975)] 2021-10-25 09:35:31.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051086: ['FBtr0084989', 'FBtr0307341'] 2021-10-25 09:35:31.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14276406, 14277280), (14276526, 14277280), (14279642, 14281394), (14279642, 14285701), (14281556, 14285701), (14287483, 14291106), (14288255, 14291106), (14289273, 14291106), (14289659, 14291106), (14291272, 14291433), (14291672, 14291751), (14291915, 14292045), (14292182, 14292228), (14292182, 14292243), (14292381, 14294092), (14292381, 14296700), (14294188, 14296700), (14296850, 14296915), (14296992, 14297138), (14297450, 14297593), (14297688, 14297746), (14297835, 14297896), (14298213, 14298374)] 2021-10-25 09:35:31.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14292228, 14295555, 'FBtr0308837_exon_6') contains intron (14292381, 14294092) 2021-10-25 09:35:31.161 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14276129, 14279642, 'FBtr0100369_exon_1') contains intron (14276406, 14277280) 2021-10-25 09:35:31.162 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308837_exon_6', 'FBtr0100369_exon_1'] 2021-10-25 09:35:31.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.175 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077054': ['FBtr0273355', 'FBtr0347000', 'FBtr0347001']} 2021-10-25 09:35:31.175 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0273355', 'FBtr0347000', 'FBtr0347001']] 2021-10-25 09:35:31.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030663: ['FBtr0074050'] 2021-10-25 09:35:31.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030663 has a single transcript. 2021-10-25 09:35:31.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030664: ['FBtr0074051'] 2021-10-25 09:35:31.198 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030664 has a single transcript. 2021-10-25 09:35:31.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030665: ['FBtr0074062', 'FBtr0339692'] 2021-10-25 09:35:31.217 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26185666, 26185737)] 2021-10-25 09:35:31.218 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.218 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034382: ['FBtr0086643'] 2021-10-25 09:35:31.222 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034382 has a single transcript. 2021-10-25 09:35:31.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005659: ['FBtr0085224', 'FBtr0339318'] 2021-10-25 09:35:31.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034383: ['FBtr0086642'] 2021-10-25 09:35:31.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034383 has a single transcript. 2021-10-25 09:35:31.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034387: ['FBtr0086609'] 2021-10-25 09:35:31.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034387 has a single transcript. 2021-10-25 09:35:31.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034389: ['FBtr0110970', 'FBtr0110971', 'FBtr0330004', 'FBtr0330005', 'FBtr0345950', 'FBtr0346955'] 2021-10-25 09:35:31.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15669335, 15670783), (15669335, 15669450)] 2021-10-25 09:35:31.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038034: ['FBtr0472646'] 2021-10-25 09:35:31.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038034 has a single transcript. 2021-10-25 09:35:31.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27737133, 27743750), (27743299, 27743750), (27744531, 27744591), (27744752, 27746412), (27746572, 27746662)] 2021-10-25 09:35:31.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038035: ['FBtr0082600'] 2021-10-25 09:35:31.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038035 has a single transcript. 2021-10-25 09:35:31.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038037: ['FBtr0082598'] 2021-10-25 09:35:31.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038037 has a single transcript. 2021-10-25 09:35:31.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038038: ['FBtr0082583'] 2021-10-25 09:35:31.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038038 has a single transcript. 2021-10-25 09:35:31.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051087: ['FBtr0084855', 'FBtr0335233'] 2021-10-25 09:35:31.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038039: ['FBtr0082584', 'FBtr0082585'] 2021-10-25 09:35:31.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030666: ['FBtr0074052', 'FBtr0289961'] 2021-10-25 09:35:31.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25311325, 25311385), (25311569, 25311639), (25311822, 25311883), (25312374, 25312445), (25312660, 25313747), (25312660, 25313760)] 2021-10-25 09:35:31.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.345 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12408472, 12409254), (12409439, 12410274), (12410356, 12410459), (12410980, 12411034)] 2021-10-25 09:35:31.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005660: ['FBtr0078079', 'FBtr0112854', 'FBtr0344014', 'FBtr0345429'] 2021-10-25 09:35:31.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15675687, 15676363), (15675803, 15676363)] 2021-10-25 09:35:31.362 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.362 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051088: ['FBtr0083241'] 2021-10-25 09:35:31.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051088 has a single transcript. 2021-10-25 09:35:31.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18762221, 18768274), (18767431, 18768274), (18768924, 18769203), (18768924, 18769146), (18769255, 18769437), (18769580, 18770369), (18770564, 18771739), (18771891, 18771954), (18772470, 18772538), (18772898, 18772957), (18773077, 18773134), (18773335, 18773397), (18773605, 18773662)] 2021-10-25 09:35:31.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051089: ['FBtr0084942'] 2021-10-25 09:35:31.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051089 has a single transcript. 2021-10-25 09:35:31.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038042: ['FBtr0082596'] 2021-10-25 09:35:31.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038042 has a single transcript. 2021-10-25 09:35:31.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051091: ['FBtr0309041', 'FBtr0344119'] 2021-10-25 09:35:31.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030667: ['FBtr0347265'] 2021-10-25 09:35:31.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030667 has a single transcript. 2021-10-25 09:35:31.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038043: ['FBtr0082587'] 2021-10-25 09:35:31.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038043 has a single transcript. 2021-10-25 09:35:31.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030668: ['FBtr0074053', 'FBtr0343332'] 2021-10-25 09:35:31.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038045: ['FBtr0082588'] 2021-10-25 09:35:31.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038045 has a single transcript. 2021-10-25 09:35:31.426 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330004': ['FBtr0346955']} 2021-10-25 09:35:31.427 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346955']] 2021-10-25 09:35:31.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038046: ['FBtr0082594'] 2021-10-25 09:35:31.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038046 has a single transcript. 2021-10-25 09:35:31.432 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(546479, 546532), (547900, 547977), (548218, 551157), (548218, 549025)] 2021-10-25 09:35:31.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038047: ['FBtr0082589'] 2021-10-25 09:35:31.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038047 has a single transcript. 2021-10-25 09:35:31.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038049: ['FBtr0082591'] 2021-10-25 09:35:31.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038049 has a single transcript. 2021-10-25 09:35:31.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038051: ['FBtr0082682'] 2021-10-25 09:35:31.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038051 has a single transcript. 2021-10-25 09:35:31.460 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25900758, 25900813), (25901539, 25901605)] 2021-10-25 09:35:31.461 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.466 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15697663, 15698032), (15697663, 15698322), (15698687, 15698759), (15698881, 15699161)] 2021-10-25 09:35:31.467 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038052: ['FBtr0082631'] 2021-10-25 09:35:31.468 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038052 has a single transcript. 2021-10-25 09:35:31.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038053: ['FBtr0082632'] 2021-10-25 09:35:31.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038053 has a single transcript. 2021-10-25 09:35:31.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038054: ['FBtr0082633'] 2021-10-25 09:35:31.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038054 has a single transcript. 2021-10-25 09:35:31.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038055: ['FBtr0082634'] 2021-10-25 09:35:31.493 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038055 has a single transcript. 2021-10-25 09:35:31.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038056: ['FBtr0082681', 'FBtr0340187', 'FBtr0303029'] 2021-10-25 09:35:31.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030669: ['FBtr0074060', 'FBtr0308614'] 2021-10-25 09:35:31.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051092: ['FBtr0084927', 'FBtr0084928', 'FBtr0113384', 'FBtr0113385', 'FBtr0113386', 'FBtr0113387', 'FBtr0113388', 'FBtr0336451', 'FBtr0336452'] 2021-10-25 09:35:31.572 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15700807, 15700988), (15700807, 15700904)] 2021-10-25 09:35:31.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.573 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12459138, 12459199), (12459903, 12459972), (12459908, 12460258), (12459908, 12459972)] 2021-10-25 09:35:31.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005664: ['FBtr0080281', 'FBtr0342578'] 2021-10-25 09:35:31.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034390: ['FBtr0086639', 'FBtr0086640', 'FBtr0303846'] 2021-10-25 09:35:31.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11944243, 11944985)] 2021-10-25 09:35:31.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.621 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030670: ['FBtr0074058', 'FBtr0074059'] 2021-10-25 09:35:31.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263398: ['FBtr0084602', 'FBtr0309096', 'FBtr0309097', 'FBtr0309095', 'FBtr0299530'] 2021-10-25 09:35:31.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15702185, 15702263), (15702415, 15702508), (15702662, 15702812), (15702662, 15703183), (15703087, 15703183), (15703318, 15703569)] 2021-10-25 09:35:31.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038057: ['FBtr0082635', 'FBtr0303028'] 2021-10-25 09:35:31.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18776826, 18776893), (18776838, 18776893)] 2021-10-25 09:35:31.679 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18775668, 18776978, 'FBtr0086640_exon_1') contains intron (18776826, 18776893) 2021-10-25 09:35:31.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086640_exon_1'] 2021-10-25 09:35:31.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005666: ['FBtr0089793', 'FBtr0301340', 'FBtr0344988', 'FBtr0334482', 'FBtr0334483'] 2021-10-25 09:35:31.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12460473, 12460523), (12460803, 12460872), (12461374, 12461437), (12461543, 12461600), (12461950, 12462008), (12462176, 12462234)] 2021-10-25 09:35:31.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030671: ['FBtr0074054', 'FBtr0344214'] 2021-10-25 09:35:31.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25699607, 25699847), (25700026, 25701308), (25700026, 25700996), (25701455, 25701524), (25701661, 25713841), (25701661, 25705930), (25701661, 25706286), (25706035, 25706286), (25706485, 25706815), (25708213, 25709290), (25709517, 25710024), (25709517, 25713536), (25710147, 25713841), (25713656, 25713841), (25713961, 25718397), (25713961, 25722415), (25718556, 25719951), (25718623, 25719965), (25718623, 25719951), (25722556, 25739054), (25739622, 25740244)] 2021-10-25 09:35:31.730 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25699223, 25700026, 'FBtr0084927_exon_11') contains intron (25699607, 25699847) 2021-10-25 09:35:31.730 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25699223, 25700026, 'FBtr0084928_exon_10') contains intron (25699607, 25699847) 2021-10-25 09:35:31.731 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25698726, 25700026, 'FBtr0113384_exon_11') contains intron (25699607, 25699847) 2021-10-25 09:35:31.731 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25698726, 25700026, 'FBtr0113385_exon_7') contains intron (25699607, 25699847) 2021-10-25 09:35:31.732 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25699223, 25700026, 'FBtr0113386_exon_12') contains intron (25699607, 25699847) 2021-10-25 09:35:31.732 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25698726, 25700026, 'FBtr0113387_exon_11') contains intron (25699607, 25699847) 2021-10-25 09:35:31.732 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25699223, 25700026, 'FBtr0113388_exon_12') contains intron (25699607, 25699847) 2021-10-25 09:35:31.733 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (25699223, 25700026, 'FBtr0336452_exon_10') contains intron (25699607, 25699847) 2021-10-25 09:35:31.733 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084927_exon_11', 'FBtr0084928_exon_10', 'FBtr0113384_exon_11', 'FBtr0113385_exon_7', 'FBtr0113386_exon_12', 'FBtr0113387_exon_11', 'FBtr0113388_exon_12', 'FBtr0336452_exon_10'] 2021-10-25 09:35:31.733 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.764 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15704406, 15704592)] 2021-10-25 09:35:31.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24290627, 24290741), (24290887, 24290944), (24291042, 24291103), (24291152, 24291511), (24291152, 24292837), (24292541, 24292596), (24292541, 24292599), (24292730, 24292837), (24292969, 24293128)] 2021-10-25 09:35:31.774 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24291511, 24292599, 'FBtr0309095_exon_5') contains intron (24292541, 24292596) 2021-10-25 09:35:31.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309095_exon_5'] 2021-10-25 09:35:31.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038058: ['FBtr0082680'] 2021-10-25 09:35:31.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038058 has a single transcript. 2021-10-25 09:35:31.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034391: ['FBtr0086613'] 2021-10-25 09:35:31.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034391 has a single transcript. 2021-10-25 09:35:31.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034392: ['FBtr0086636', 'FBtr0086637'] 2021-10-25 09:35:31.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038063: ['FBtr0100019', 'FBtr0330120', 'FBtr0304844', 'FBtr0304845', 'FBtr0304846', 'FBtr0347149'] 2021-10-25 09:35:31.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(724491, 725668), (725387, 725668), (726029, 726931), (726029, 726661), (726683, 727460), (726962, 727460), (727623, 728103), (728245, 728672), (728245, 730776), (728814, 729001), (729202, 729273), (729575, 730776), (731000, 731062), (731465, 731559), (732233, 733216), (732233, 733919), (733564, 733919), (733964, 734278), (734401, 734477), (734537, 735514), (734537, 734713), (734812, 735514), (735823, 735904), (736030, 736148), (736030, 737735), (736187, 736818), (736187, 736338), (736515, 736818), (737046, 737735), (737909, 738952), (737909, 742402), (738988, 742402), (738988, 739948), (739981, 742402), (742550, 742787), (743161, 743524), (743161, 745165), (743602, 745165), (745291, 745371), (746071, 746475), (746829, 747306), (749019, 750569), (751469, 752176), (752940, 753024), (753160, 753337), (754228, 754286), (756959, 757520), (757802, 757864), (758164, 758219), (767690, 767761), (768740, 768803), (769145, 770552), (771595, 772402), (771595, 774016), (772459, 774016), (774117, 774184), (774311, 774376), (774679, 774914)] 2021-10-25 09:35:31.824 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030672: ['FBtr0074056', 'FBtr0074057', 'FBtr0340308'] 2021-10-25 09:35:31.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18795006, 18795068), (18796166, 18796269), (18796406, 18796476)] 2021-10-25 09:35:31.839 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18796269, 18796678, 'FBtr0086637_exon_1') contains intron (18796406, 18796476) 2021-10-25 09:35:31.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086637_exon_1'] 2021-10-25 09:35:31.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.888 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15707064, 15707128), (15707665, 15707732), (15708238, 15708313), (15708982, 15710305)] 2021-10-25 09:35:31.889 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034394: ['FBtr0086632', 'FBtr0086633'] 2021-10-25 09:35:31.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12553247, 12553768), (12553946, 12554243), (12554602, 12554675), (12554774, 12556976), (12557075, 12560400), (12561804, 12595394), (12561804, 12595560), (12563119, 12593482), (12563119, 12594509)] 2021-10-25 09:35:31.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.950 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18808776, 18808889), (18809975, 18810041), (18810178, 18814603), (18810178, 18811321)] 2021-10-25 09:35:31.951 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:31.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:31.957 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0100019': ['FBtr0330120']} 2021-10-25 09:35:31.957 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330120']] 2021-10-25 09:35:31.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263399: ['FBtr0309175'] 2021-10-25 09:35:31.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263399 has a single transcript. 2021-10-25 09:35:31.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263400: ['FBtr0309176', 'FBtr0309177'] 2021-10-25 09:35:31.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030673: ['FBtr0074055', 'FBtr0339683', 'FBtr0339684', 'FBtr0339685'] 2021-10-25 09:35:32.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034396: ['FBtr0086630', 'FBtr0303237', 'FBtr0330604', 'FBtr0330605'] 2021-10-25 09:35:32.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20987262, 20987331), (20987265, 20987331)] 2021-10-25 09:35:32.022 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.022 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005670: ['FBtr0070427', 'FBtr0070428'] 2021-10-25 09:35:32.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263401: ['FBtr0309178'] 2021-10-25 09:35:32.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263401 has a single transcript. 2021-10-25 09:35:32.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15711318, 15711511), (15711318, 15711508), (15711456, 15711511), (15711456, 15711508)] 2021-10-25 09:35:32.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263402: ['FBtr0309181'] 2021-10-25 09:35:32.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263402 has a single transcript. 2021-10-25 09:35:32.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18823173, 18823236), (18824569, 18824703), (18824800, 18825496), (18825680, 18826018), (18826218, 18829470)] 2021-10-25 09:35:32.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263403: ['FBtr0309182', 'FBtr0309183'] 2021-10-25 09:35:32.101 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18823236, 18824800, 'FBtr0086630_exon_2') contains intron (18824569, 18824703) 2021-10-25 09:35:32.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086630_exon_2'] 2021-10-25 09:35:32.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2159564, 2159624), (2160248, 2161580), (2160248, 2160382)] 2021-10-25 09:35:32.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051093: ['FBtr0084917'] 2021-10-25 09:35:32.115 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0303237': ['FBtr0330604', 'FBtr0330605']} 2021-10-25 09:35:32.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051093 has a single transcript. 2021-10-25 09:35:32.116 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330604', 'FBtr0330605']] 2021-10-25 09:35:32.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051097: ['FBtr0290052'] 2021-10-25 09:35:32.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051097 has a single transcript. 2021-10-25 09:35:32.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051098: ['FBtr0084863'] 2021-10-25 09:35:32.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051098 has a single transcript. 2021-10-25 09:35:32.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038065: ['FBtr0082641', 'FBtr0082642'] 2021-10-25 09:35:32.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051099: ['FBtr0084856'] 2021-10-25 09:35:32.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051099 has a single transcript. 2021-10-25 09:35:32.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:32.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051100: ['FBtr0082011', 'FBtr0336756'] 2021-10-25 09:35:32.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034397: ['FBtr0086617', 'FBtr0330053'] 2021-10-25 09:35:32.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005671: ['FBtr0082670', 'FBtr0082671', 'FBtr0301661'] 2021-10-25 09:35:32.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12628520, 12628888), (12628984, 12629221)] 2021-10-25 09:35:32.193 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.193 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.201 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8995599, 8995655), (8997029, 8998990), (8999107, 8999449), (8999652, 9000043), (9000180, 9003540), (9000180, 9000286), (9000544, 9001768)] 2021-10-25 09:35:32.202 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263404: ['FBtr0309189'] 2021-10-25 09:35:32.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263404 has a single transcript. 2021-10-25 09:35:32.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18831300, 18832171), (18832681, 18832789)] 2021-10-25 09:35:32.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.222 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263405: ['FBtr0309184'] 2021-10-25 09:35:32.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263405 has a single transcript. 2021-10-25 09:35:32.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263406: ['FBtr0309185'] 2021-10-25 09:35:32.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263406 has a single transcript. 2021-10-25 09:35:32.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12624904, 12624965), (12626227, 12627448), (12627561, 12627639), (12627575, 12627639)] 2021-10-25 09:35:32.238 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12627448, 12627701, 'FBtr0082671_exon_1') contains intron (12627561, 12627639) 2021-10-25 09:35:32.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082671_exon_1'] 2021-10-25 09:35:32.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263407: ['FBtr0309186'] 2021-10-25 09:35:32.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263407 has a single transcript. 2021-10-25 09:35:32.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263408: ['FBtr0309187'] 2021-10-25 09:35:32.248 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263408 has a single transcript. 2021-10-25 09:35:32.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030674: ['FBtr0074082', 'FBtr0340304', 'FBtr0339686', 'FBtr0339687', 'FBtr0339688', 'FBtr0339689', 'FBtr0339690'] 2021-10-25 09:35:32.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038067: ['FBtr0110781'] 2021-10-25 09:35:32.252 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038067 has a single transcript. 2021-10-25 09:35:32.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263409: ['FBtr0309188'] 2021-10-25 09:35:32.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263409 has a single transcript. 2021-10-25 09:35:32.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038068: ['FBtr0303840'] 2021-10-25 09:35:32.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038068 has a single transcript. 2021-10-25 09:35:32.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263410: ['FBtr0309191'] 2021-10-25 09:35:32.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263410 has a single transcript. 2021-10-25 09:35:32.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038069: ['FBtr0303841'] 2021-10-25 09:35:32.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038069 has a single transcript. 2021-10-25 09:35:32.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051102: ['FBtr0084862', 'FBtr0335234'] 2021-10-25 09:35:32.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263411: ['FBtr0309190'] 2021-10-25 09:35:32.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263411 has a single transcript. 2021-10-25 09:35:32.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038070: ['FBtr0301150'] 2021-10-25 09:35:32.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038070 has a single transcript. 2021-10-25 09:35:32.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038071: ['FBtr0082648'] 2021-10-25 09:35:32.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038071 has a single transcript. 2021-10-25 09:35:32.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263412: ['FBtr0309192', 'FBtr0309193'] 2021-10-25 09:35:32.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034398: ['FBtr0086629'] 2021-10-25 09:35:32.284 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034398 has a single transcript. 2021-10-25 09:35:32.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038072: ['FBtr0082649', 'FBtr0113225'] 2021-10-25 09:35:32.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034399: ['FBtr0086618'] 2021-10-25 09:35:32.291 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034399 has a single transcript. 2021-10-25 09:35:32.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034400: ['FBtr0086628', 'FBtr0330054'] 2021-10-25 09:35:32.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25293851, 25293907), (25294271, 25294335), (25294271, 25294347), (25294835, 25295096)] 2021-10-25 09:35:32.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31132768, 31132870)] 2021-10-25 09:35:32.326 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31132329, 31133050, 'FBtr0309193_exon_1') contains intron (31132768, 31132870) 2021-10-25 09:35:32.326 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309193_exon_1'] 2021-10-25 09:35:32.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12654630, 12656660), (12654856, 12656660), (12656902, 12658136), (12658210, 12658271), (12658946, 12659003), (12659116, 12659169), (12659882, 12659949), (12660018, 12660074)] 2021-10-25 09:35:32.330 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.330 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18837568, 18837633), (18837976, 18838032), (18838228, 18838384), (18842679, 18842734), (18842843, 18842899), (18843668, 18843726), (18844027, 18844102), (18845335, 18845393), (18845572, 18845710), (18845959, 18846572), (18845959, 18846497)] 2021-10-25 09:35:32.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005672: ['FBtr0081270', 'FBtr0081269', 'FBtr0081268', 'FBtr0100597', 'FBtr0081267'] 2021-10-25 09:35:32.386 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051103: ['FBtr0113389'] 2021-10-25 09:35:32.387 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051103 has a single transcript. 2021-10-25 09:35:32.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051104: ['FBtr0084825'] 2021-10-25 09:35:32.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051104 has a single transcript. 2021-10-25 09:35:32.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263413: ['FBtr0309196', 'FBtr0309197', 'FBtr0346908'] 2021-10-25 09:35:32.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038073: ['FBtr0300769', 'FBtr0310613', 'FBtr0335028', 'FBtr0335029', 'FBtr0335030', 'FBtr0335031', 'FBtr0335032', 'FBtr0335033'] 2021-10-25 09:35:32.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051105: ['FBtr0273357', 'FBtr0306088'] 2021-10-25 09:35:32.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034401: ['FBtr0086627'] 2021-10-25 09:35:32.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034401 has a single transcript. 2021-10-25 09:35:32.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034402: ['FBtr0086619'] 2021-10-25 09:35:32.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034402 has a single transcript. 2021-10-25 09:35:32.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15712778, 15713900), (15713815, 15713900), (15714381, 15714716), (15714393, 15714716), (15714956, 15715025), (15715247, 15715305), (15715577, 15715660), (15715577, 15715657), (15716154, 15716291), (15721399, 15721545), (15721399, 15721563), (15723079, 15723232), (15723124, 15723232), (15723157, 15723232), (15724378, 15724441), (15724915, 15724973), (15725314, 15725376), (15726447, 15726537), (15726673, 15726732), (15729357, 15729429), (15729831, 15729898), (15730087, 15730151), (15730473, 15730536), (15730702, 15730776), (15730967, 15731044)] 2021-10-25 09:35:32.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15721563, 15724378, 'FBtr0074082_exon_8') contains intron (15723079, 15723232) 2021-10-25 09:35:32.417 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15721545, 15724378, 'FBtr0340304_exon_8') contains intron (15723079, 15723232) 2021-10-25 09:35:32.418 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15721563, 15724378, 'FBtr0339686_exon_8') contains intron (15723079, 15723232) 2021-10-25 09:35:32.419 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15721563, 15724378, 'FBtr0339687_exon_8') contains intron (15723079, 15723232) 2021-10-25 09:35:32.421 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074082_exon_8', 'FBtr0340304_exon_8', 'FBtr0339686_exon_8', 'FBtr0339687_exon_8'] 2021-10-25 09:35:32.422 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034403: ['FBtr0273238'] 2021-10-25 09:35:32.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034403 has a single transcript. 2021-10-25 09:35:32.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034405: ['FBtr0089970', 'FBtr0345981'] 2021-10-25 09:35:32.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24857797, 24857856), (24858141, 24858200), (24858429, 24858482), (24858750, 24858800), (24858934, 24858987), (24859177, 24859243), (24859450, 24859514)] 2021-10-25 09:35:32.448 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.448 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:32.464 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.474 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18856691, 18856883), (18857091, 18857203), (18857403, 18857652)] 2021-10-25 09:35:32.474 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19569226, 19577185), (19569226, 19571571), (19569226, 19572499), (19571767, 19572499), (19571767, 19577185), (19571767, 19575534)] 2021-10-25 09:35:32.474 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.474 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.475 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.475 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051106: ['FBtr0301022'] 2021-10-25 09:35:32.511 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051106 has a single transcript. 2021-10-25 09:35:32.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051108: ['FBtr0084802', 'FBtr0339247'] 2021-10-25 09:35:32.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034406: ['FBtr0086622'] 2021-10-25 09:35:32.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034406 has a single transcript. 2021-10-25 09:35:32.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034407: ['FBtr0086621'] 2021-10-25 09:35:32.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034407 has a single transcript. 2021-10-25 09:35:32.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034408: ['FBtr0086566', 'FBtr0086567', 'FBtr0086568', 'FBtr0086569', 'FBtr0290300', 'FBtr0344564'] 2021-10-25 09:35:32.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25114923, 25114978), (25115192, 25115254), (25116040, 25116111), (25116157, 25122560)] 2021-10-25 09:35:32.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263414: ['FBtr0309198', 'FBtr0309199', 'FBtr0309200'] 2021-10-25 09:35:32.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12663143, 12668450), (12664244, 12668450), (12666897, 12668450), (12668061, 12668450), (12669008, 12670133), (12670521, 12670581), (12670826, 12670946), (12671759, 12671923), (12671759, 12671863), (12671759, 12671905), (12672161, 12672220), (12672161, 12672223), (12672507, 12672637), (12672525, 12672637)] 2021-10-25 09:35:32.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.597 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051109: ['FBtr0084791', 'FBtr0334506'] 2021-10-25 09:35:32.647 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13971912, 13974154), (13971945, 13974154)] 2021-10-25 09:35:32.648 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.648 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25053868, 25053932), (25053974, 25054041), (25054179, 25054355)] 2021-10-25 09:35:32.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005674: ['FBtr0084511', 'FBtr0084512'] 2021-10-25 09:35:32.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18878640, 18879825), (18878640, 18902865), (18880128, 18902865), (18880128, 18913442), (18902912, 18913442), (18913494, 18954977), (18947586, 18954977), (18947820, 18954977), (18956126, 18956256), (18957492, 18957719), (18958435, 18958592)] 2021-10-25 09:35:32.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.720 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0086569': ['FBtr0344564']} 2021-10-25 09:35:32.720 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344564']] 2021-10-25 09:35:32.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23953378, 23953445), (23955305, 23955451), (23955305, 23955705), (23956768, 23956825), (23956997, 23957145), (23958063, 23958242)] 2021-10-25 09:35:32.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.726 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030675: ['FBtr0074083'] 2021-10-25 09:35:32.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030675 has a single transcript. 2021-10-25 09:35:32.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030676: ['FBtr0273278'] 2021-10-25 09:35:32.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051111: ['FBtr0084790'] 2021-10-25 09:35:32.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030676 has a single transcript. 2021-10-25 09:35:32.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051111 has a single transcript. 2021-10-25 09:35:32.743 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030678: ['FBtr0074202'] 2021-10-25 09:35:32.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030678 has a single transcript. 2021-10-25 09:35:32.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051115: ['FBtr0290053'] 2021-10-25 09:35:32.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051115 has a single transcript. 2021-10-25 09:35:32.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030679: ['FBtr0074085', 'FBtr0346187'] 2021-10-25 09:35:32.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263415: ['FBtr0309201'] 2021-10-25 09:35:32.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263415 has a single transcript. 2021-10-25 09:35:32.763 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263441: ['FBtr0309284'] 2021-10-25 09:35:32.763 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263441 has a single transcript. 2021-10-25 09:35:32.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263442: ['FBtr0309287'] 2021-10-25 09:35:32.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263442 has a single transcript. 2021-10-25 09:35:32.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051116: ['FBtr0082526', 'FBtr0082527', 'FBtr0082528', 'FBtr0113391', 'FBtr0300622', 'FBtr0301023', 'FBtr0334891'] 2021-10-25 09:35:32.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263443: ['FBtr0309289'] 2021-10-25 09:35:32.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263443 has a single transcript. 2021-10-25 09:35:32.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263444: ['FBtr0309290', 'FBtr0309291'] 2021-10-25 09:35:32.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:32.799 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.799 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005677: ['FBtr0080878', 'FBtr0080875', 'FBtr0080876', 'FBtr0100399', 'FBtr0100400', 'FBtr0080877'] 2021-10-25 09:35:32.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:32.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030680: ['FBtr0074201'] 2021-10-25 09:35:32.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030680 has a single transcript. 2021-10-25 09:35:32.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030683: ['FBtr0074087', 'FBtr0346188'] 2021-10-25 09:35:32.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263445: ['FBtr0309293'] 2021-10-25 09:35:32.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263445 has a single transcript. 2021-10-25 09:35:32.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263446: ['FBtr0339390', 'FBtr0309292'] 2021-10-25 09:35:32.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038074: ['FBtr0082651'] 2021-10-25 09:35:32.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038074 has a single transcript. 2021-10-25 09:35:32.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034411: ['FBtr0302494'] 2021-10-25 09:35:32.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034411 has a single transcript. 2021-10-25 09:35:32.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038076: ['FBtr0082667'] 2021-10-25 09:35:32.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038076 has a single transcript. 2021-10-25 09:35:32.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034413: ['FBtr0086597'] 2021-10-25 09:35:32.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034413 has a single transcript. 2021-10-25 09:35:32.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038078: ['FBtr0082663'] 2021-10-25 09:35:32.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038078 has a single transcript. 2021-10-25 09:35:32.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034415: ['FBtr0086596'] 2021-10-25 09:35:32.934 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034415 has a single transcript. 2021-10-25 09:35:32.936 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15749303, 15749364), (15749435, 15749831), (15749949, 15750009)] 2021-10-25 09:35:32.937 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.937 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16467754, 16468052), (16468246, 16468492), (16468730, 16468994), (16469255, 16471855), (16471939, 16472127), (16472643, 16472769), (16473072, 16473199), (16473595, 16475274), (16475405, 16483807), (16475405, 16481524), (16475411, 16483807), (16475411, 16481524), (16475432, 16483807), (16475432, 16481524), (16481551, 16483807), (16484807, 16485436)] 2021-10-25 09:35:32.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034416: ['FBtr0086574', 'FBtr0100137', 'FBtr0299568'] 2021-10-25 09:35:32.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038079: ['FBtr0114499', 'FBtr0114500', 'FBtr0114501', 'FBtr0113226', 'FBtr0113227', 'FBtr0113228'] 2021-10-25 09:35:32.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11797747, 11797805), (11798039, 11798990), (11798039, 11798117), (11798147, 11798273), (11798543, 11798728), (11798764, 11798852), (11798897, 11798990), (11800088, 11800140), (11800375, 11800437), (11800539, 11800591), (11800802, 11800871), (11801028, 11801159), (11801293, 11801951), (11802080, 11802169), (11802335, 11802583), (11802354, 11802583), (11802691, 11806032), (11802691, 11810363), (11802691, 11803715), (11811135, 11813026), (11811135, 11812994)] 2021-10-25 09:35:32.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12873176, 12873247), (12873188, 12873247), (12874720, 12874794)] 2021-10-25 09:35:32.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:32.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:32.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030684: ['FBtr0074088', 'FBtr0074089'] 2021-10-25 09:35:33.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19059486, 19059595), (19059643, 19059734), (19059653, 19059734)] 2021-10-25 09:35:33.005 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19059595, 19061065, 'FBtr0086574_exon_2') contains intron (19059643, 19059734) 2021-10-25 09:35:33.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086574_exon_2'] 2021-10-25 09:35:33.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263447: ['FBtr0309296', 'FBtr0309297'] 2021-10-25 09:35:33.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15756512, 15756573), (15757225, 15757308)] 2021-10-25 09:35:33.041 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15756317, 15757225, 'FBtr0074088_exon_1') contains intron (15756512, 15756573) 2021-10-25 09:35:33.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074088_exon_1'] 2021-10-25 09:35:33.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.064 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7250720, 7250777), (7250724, 7250837), (7250924, 7251036)] 2021-10-25 09:35:33.064 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.064 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.082 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12695406, 12696122), (12696047, 12696122), (12696299, 12697064), (12696299, 12696723), (12696299, 12696453), (12696660, 12696723)] 2021-10-25 09:35:33.083 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.083 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030685: ['FBtr0074197', 'FBtr0074198', 'FBtr0074194', 'FBtr0340305', 'FBtr0340306', 'FBtr0340307', 'FBtr0345133'] 2021-10-25 09:35:33.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263448: ['FBtr0309300'] 2021-10-25 09:35:33.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263448 has a single transcript. 2021-10-25 09:35:33.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034417: ['FBtr0086594', 'FBtr0086593', 'FBtr0100129', 'FBtr0340457', 'FBtr0340458', 'FBtr0340459'] 2021-10-25 09:35:33.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263449: ['FBtr0309304'] 2021-10-25 09:35:33.127 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263449 has a single transcript. 2021-10-25 09:35:33.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263451: ['FBtr0309306'] 2021-10-25 09:35:33.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263451 has a single transcript. 2021-10-25 09:35:33.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263452: ['FBtr0309305'] 2021-10-25 09:35:33.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263452 has a single transcript. 2021-10-25 09:35:33.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263453: ['FBtr0309308'] 2021-10-25 09:35:33.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263453 has a single transcript. 2021-10-25 09:35:33.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263454: ['FBtr0309310'] 2021-10-25 09:35:33.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263454 has a single transcript. 2021-10-25 09:35:33.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263455: ['FBtr0309311'] 2021-10-25 09:35:33.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263455 has a single transcript. 2021-10-25 09:35:33.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005683: ['FBtr0080046', 'FBtr0333490'] 2021-10-25 09:35:33.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263456: ['FBtr0309276', 'FBtr0309277', 'FBtr0309278', 'FBtr0309280', 'FBtr0344238', 'FBtr0344239', 'FBtr0344240', 'FBtr0344241', 'FBtr0344242', 'FBtr0331857'] 2021-10-25 09:35:33.230 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10422462, 10422529)] 2021-10-25 09:35:33.231 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.231 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051118: ['FBtr0084736'] 2021-10-25 09:35:33.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051118 has a single transcript. 2021-10-25 09:35:33.263 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051119: ['FBtr0084734', 'FBtr0305045'] 2021-10-25 09:35:33.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15752333, 15752392), (15752472, 15752540), (15753836, 15753908), (15754014, 15754084), (15754415, 15754485), (15754772, 15755103), (15754799, 15755103), (15755155, 15755214), (15755286, 15755346), (15755562, 15755818), (15755992, 15756078), (15756236, 15757855), (15758317, 15760124), (15758317, 15760239), (15758317, 15760640), (15758317, 15760466), (15760194, 15760251)] 2021-10-25 09:35:33.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.272 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.290 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19122613, 19122671), (19122810, 19122909), (19123086, 19123147), (19123232, 19123294), (19123438, 19123498), (19124036, 19124104), (19124417, 19124536), (19124886, 19126207), (19124940, 19128996), (19124940, 19127469), (19124940, 19125745), (19124940, 19127191), (19124940, 19125021)] 2021-10-25 09:35:33.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005694: ['FBtr0078348', 'FBtr0078349', 'FBtr0078350', 'FBtr0330156'] 2021-10-25 09:35:33.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24855945, 24856001)] 2021-10-25 09:35:33.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038080: ['FBtr0082656'] 2021-10-25 09:35:33.347 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038080 has a single transcript. 2021-10-25 09:35:33.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038082: ['FBtr0082657'] 2021-10-25 09:35:33.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038082 has a single transcript. 2021-10-25 09:35:33.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038083: ['FBtr0302379'] 2021-10-25 09:35:33.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038083 has a single transcript. 2021-10-25 09:35:33.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051121: ['FBtr0084723', 'FBtr0084724'] 2021-10-25 09:35:33.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038084: ['FBtr0082658'] 2021-10-25 09:35:33.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038084 has a single transcript. 2021-10-25 09:35:33.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038087: ['FBtr0302367', 'FBtr0082688', 'FBtr0337093'] 2021-10-25 09:35:33.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21433701, 21435024), (21434047, 21435024), (21435130, 21435192), (21436009, 21436072)] 2021-10-25 09:35:33.393 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21435024, 21436009, 'FBtr0078348_exon_2') contains intron (21435130, 21435192) 2021-10-25 09:35:33.393 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21435024, 21436009, 'FBtr0078350_exon_2') contains intron (21435130, 21435192) 2021-10-25 09:35:33.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21435024, 21436009, 'FBtr0330156_exon_2') contains intron (21435130, 21435192) 2021-10-25 09:35:33.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078348_exon_2', 'FBtr0078350_exon_2', 'FBtr0330156_exon_2'] 2021-10-25 09:35:33.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.414 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24881832, 24881905), (24882186, 24882247), (24882368, 24882456), (24882926, 24882982), (24884352, 24884560), (24884692, 24885007), (24885141, 24894184), (24885141, 24891574)] 2021-10-25 09:35:33.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9137889, 9138581), (9137964, 9138581), (9138697, 9138772), (9139002, 9139092), (9139620, 9139905), (9140788, 9140850), (9141019, 9141088), (9141508, 9143297), (9141508, 9141786), (9141843, 9143297), (9141843, 9142572), (9143323, 9143526), (9143665, 9143740), (9143665, 9143737), (9143866, 9143929), (9144294, 9144393)] 2021-10-25 09:35:33.449 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143929, 9145693, 'FBtr0309276_exon_12') contains intron (9144294, 9144393) 2021-10-25 09:35:33.449 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0309277_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.449 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0309278_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.450 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9145693, 'FBtr0309278_exon_9') contains intron (9143665, 9143740) 2021-10-25 09:35:33.450 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0309280_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.450 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9145693, 'FBtr0309280_exon_9') contains intron (9143665, 9143740) 2021-10-25 09:35:33.451 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0344239_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.451 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9144294, 'FBtr0344239_exon_9') contains intron (9143665, 9143740) 2021-10-25 09:35:33.451 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0344240_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9144294, 'FBtr0344240_exon_8') contains intron (9143665, 9143740) 2021-10-25 09:35:33.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0344241_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12842321, 12842601), (12842857, 12842978), (12843112, 12843176), (12843385, 12843443), (12843597, 12846978), (12847193, 12847953)] 2021-10-25 09:35:33.452 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9145693, 'FBtr0344241_exon_8') contains intron (9143665, 9143740) 2021-10-25 09:35:33.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9143866, 'FBtr0344242_exon_10') contains intron (9143665, 9143740) 2021-10-25 09:35:33.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9140850, 9141508, 'FBtr0331857_exon_6') contains intron (9141019, 9141088) 2021-10-25 09:35:33.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9143526, 9145693, 'FBtr0331857_exon_9') contains intron (9143665, 9143740) 2021-10-25 09:35:33.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309276_exon_12', 'FBtr0309277_exon_6', 'FBtr0309278_exon_6', 'FBtr0309278_exon_9', 'FBtr0309280_exon_6', 'FBtr0309280_exon_9', 'FBtr0344239_exon_6', 'FBtr0344239_exon_9', 'FBtr0344240_exon_6', 'FBtr0344240_exon_8', 'FBtr0344241_exon_6', 'FBtr0344241_exon_8', 'FBtr0344242_exon_10', 'FBtr0331857_exon_6', 'FBtr0331857_exon_9'] 2021-10-25 09:35:33.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051122: ['FBtr0083653', 'FBtr0301432', 'FBtr0333831'] 2021-10-25 09:35:33.537 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18407827, 18407890), (18408213, 18408274), (18408216, 18408274), (18408440, 18408618), (18409270, 18409331), (18409436, 18409497), (18409871, 18412761)] 2021-10-25 09:35:33.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18406630, 18408213, 'FBtr0301432_exon_6') contains intron (18407827, 18407890) 2021-10-25 09:35:33.538 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18406063, 18408216, 'FBtr0333831_exon_5') contains intron (18407827, 18407890) 2021-10-25 09:35:33.539 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301432_exon_6', 'FBtr0333831_exon_5'] 2021-10-25 09:35:33.539 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034418: ['FBtr0086590', 'FBtr0086591', 'FBtr0086592', 'FBtr0113096'] 2021-10-25 09:35:33.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005695: ['FBtr0088710', 'FBtr0339337'] 2021-10-25 09:35:33.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038088: ['FBtr0082686', 'FBtr0082687'] 2021-10-25 09:35:33.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030686: ['FBtr0074090'] 2021-10-25 09:35:33.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030686 has a single transcript. 2021-10-25 09:35:33.585 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8724464, 8726614), (8724464, 8724640), (8724685, 8726614), (8726771, 8726829), (8727777, 8727847), (8727777, 8727850)] 2021-10-25 09:35:33.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.586 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030687: ['FBtr0300811'] 2021-10-25 09:35:33.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030687 has a single transcript. 2021-10-25 09:35:33.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030688: ['FBtr0074193'] 2021-10-25 09:35:33.597 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030688 has a single transcript. 2021-10-25 09:35:33.604 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12855767, 12855824), (12856037, 12856129), (12856187, 12856242), (12856362, 12856456), (12856605, 12857489), (12856605, 12859175)] 2021-10-25 09:35:33.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030691: ['FBtr0074192'] 2021-10-25 09:35:33.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030691 has a single transcript. 2021-10-25 09:35:33.605 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030692: ['FBtr0074094', 'FBtr0346193'] 2021-10-25 09:35:33.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051125: ['FBtr0084665'] 2021-10-25 09:35:33.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051125 has a single transcript. 2021-10-25 09:35:33.643 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19134431, 19134882), (19134726, 19134882), (19135625, 19135684), (19135780, 19135938), (19136255, 19136322), (19136637, 19136694), (19136827, 19136950), (19137070, 19137123)] 2021-10-25 09:35:33.644 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19136950, 19137169, 'FBtr0086591_exon_1') contains intron (19137070, 19137123) 2021-10-25 09:35:33.645 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19136950, 19137169, 'FBtr0113096_exon_1') contains intron (19137070, 19137123) 2021-10-25 09:35:33.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086591_exon_1', 'FBtr0113096_exon_1'] 2021-10-25 09:35:33.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005696: ['FBtr0114543'] 2021-10-25 09:35:33.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005696 has a single transcript. 2021-10-25 09:35:33.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051126: ['FBtr0084663'] 2021-10-25 09:35:33.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051126 has a single transcript. 2021-10-25 09:35:33.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051128: ['FBtr0084638'] 2021-10-25 09:35:33.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051128 has a single transcript. 2021-10-25 09:35:33.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15786629, 15786793)] 2021-10-25 09:35:33.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005771: ['FBtr0080643', 'FBtr0342913'] 2021-10-25 09:35:33.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051130: ['FBtr0084597'] 2021-10-25 09:35:33.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051130 has a single transcript. 2021-10-25 09:35:33.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038089: ['FBtr0082683'] 2021-10-25 09:35:33.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038089 has a single transcript. 2021-10-25 09:35:33.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051131: ['FBtr0300438'] 2021-10-25 09:35:33.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051131 has a single transcript. 2021-10-25 09:35:33.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038090: ['FBtr0082685'] 2021-10-25 09:35:33.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038090 has a single transcript. 2021-10-25 09:35:33.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051133: ['FBtr0084583'] 2021-10-25 09:35:33.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051133 has a single transcript. 2021-10-25 09:35:33.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038092: ['FBtr0082684', 'FBtr0337087'] 2021-10-25 09:35:33.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051139: ['FBtr0084321', 'FBtr0339522'] 2021-10-25 09:35:33.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14491335, 14491637)] 2021-10-25 09:35:33.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12916143, 12918443), (12916404, 12918443), (12918769, 12928864), (12929018, 12931575), (12931784, 12933340), (12933474, 12933533), (12933834, 12934394)] 2021-10-25 09:35:33.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.731 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22748820, 22748879), (22748824, 22748879)] 2021-10-25 09:35:33.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030693: ['FBtr0074185', 'FBtr0074186', 'FBtr0074187', 'FBtr0074188', 'FBtr0074189'] 2021-10-25 09:35:33.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005775: ['FBtr0073375', 'FBtr0309972'] 2021-10-25 09:35:33.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034419: ['FBtr0086580', 'FBtr0086581'] 2021-10-25 09:35:33.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038095: ['FBtr0082691'] 2021-10-25 09:35:33.796 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038095 has a single transcript. 2021-10-25 09:35:33.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051140: ['FBtr0084497', 'FBtr0084498', 'FBtr0113392', 'FBtr0113393', 'FBtr0330371', 'FBtr0300963', 'FBtr0305041'] 2021-10-25 09:35:33.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038097: ['FBtr0082731', 'FBtr0337088'] 2021-10-25 09:35:33.825 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4940106, 4952890), (4953107, 4955825), (4956883, 4963116), (4963190, 4975817), (4963190, 4987076), (4987168, 5045391), (5045425, 5065391), (5065418, 5078296)] 2021-10-25 09:35:33.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19137536, 19137817), (19137903, 19138227), (19138261, 19139693), (19138261, 19139140), (19139349, 19139693), (19139812, 19139875)] 2021-10-25 09:35:33.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.834 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15794201, 15794266), (15794433, 15794496), (15795101, 15795964), (15795101, 15795160), (15795101, 15795809), (15795101, 15795892), (15795101, 15796001), (15795416, 15795486), (15795575, 15795892)] 2021-10-25 09:35:33.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12966476, 12966552), (12966748, 12967159), (12967378, 12967453)] 2021-10-25 09:35:33.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005777: ['FBtr0082129', 'FBtr0082128', 'FBtr0331693'] 2021-10-25 09:35:33.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263457: ['FBtr0309314', 'FBtr0309315'] 2021-10-25 09:35:33.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034420: ['FBtr0086585', 'FBtr0086588', 'FBtr0086586', 'FBtr0100282', 'FBtr0340451', 'FBtr0340452', 'FBtr0340453', 'FBtr0290311', 'FBtr0290312', 'FBtr0290313', 'FBtr0290314', 'FBtr0290316', 'FBtr0290317', 'FBtr0290318'] 2021-10-25 09:35:33.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038098: ['FBtr0082726', 'FBtr0082727', 'FBtr0301219', 'FBtr0331428', 'FBtr0331429'] 2021-10-25 09:35:33.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23090487, 23091220), (23091637, 23091688), (23091820, 23091933), (23092384, 23092483)] 2021-10-25 09:35:33.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.968 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9747930, 9748174), (9747930, 9748077), (9748401, 9748611), (9748853, 9748909), (9749060, 9749125), (9749247, 9749305), (9749576, 9749640), (9750091, 9750147), (9750229, 9750284)] 2021-10-25 09:35:33.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:33.970 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:33.973 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23963211, 23965799), (23963223, 23965804), (23963223, 23965799), (23963233, 23965799), (23966702, 23972447), (23972527, 23972608), (23972711, 23973034), (23973141, 23973207), (23973292, 23973353), (23973554, 23976165), (23973554, 23974151), (23973554, 23974349), (23975678, 23976165), (23976447, 23976503), (23976933, 23976996), (23977318, 23977382), (23977612, 23977672), (23977821, 23977935), (23978115, 23978949), (23978211, 23978949), (23979235, 23979298), (23979455, 23979514), (23979622, 23980527), (23979622, 23981725)] 2021-10-25 09:35:33.974 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23977382, 23977821, 'FBtr0084497_exon_12') contains intron (23977612, 23977672) 2021-10-25 09:35:33.975 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23977382, 23977821, 'FBtr0084498_exon_11') contains intron (23977612, 23977672) 2021-10-25 09:35:33.976 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23977382, 23977821, 'FBtr0113392_exon_12') contains intron (23977612, 23977672) 2021-10-25 09:35:33.976 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23977382, 23977821, 'FBtr0330371_exon_12') contains intron (23977612, 23977672) 2021-10-25 09:35:33.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23977382, 23977821, 'FBtr0305041_exon_12') contains intron (23977612, 23977672) 2021-10-25 09:35:33.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084497_exon_12', 'FBtr0084498_exon_11', 'FBtr0113392_exon_12', 'FBtr0330371_exon_12', 'FBtr0305041_exon_12'] 2021-10-25 09:35:33.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.004 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0113392': ['FBtr0330371']} 2021-10-25 09:35:34.004 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330371']] 2021-10-25 09:35:34.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263458: ['FBtr0309757'] 2021-10-25 09:35:34.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263458 has a single transcript. 2021-10-25 09:35:34.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263459: ['FBtr0309758'] 2021-10-25 09:35:34.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263459 has a single transcript. 2021-10-25 09:35:34.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263460: ['FBtr0309759'] 2021-10-25 09:35:34.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263460 has a single transcript. 2021-10-25 09:35:34.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263461: ['FBtr0309760'] 2021-10-25 09:35:34.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263461 has a single transcript. 2021-10-25 09:35:34.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12968283, 12968344), (12968497, 12968561), (12968693, 12968762), (12969167, 12969230), (12969350, 12969420), (12969540, 12969630), (12970245, 12970322), (12970248, 12970322), (12970440, 12970510), (12970818, 12977006), (12970818, 12973576), (12970818, 12972004), (12973726, 12977006), (12973844, 12974288)] 2021-10-25 09:35:34.043 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030694: ['FBtr0074097', 'FBtr0340114'] 2021-10-25 09:35:34.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263462: ['FBtr0309761'] 2021-10-25 09:35:34.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263462 has a single transcript. 2021-10-25 09:35:34.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263463: ['FBtr0309762'] 2021-10-25 09:35:34.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263463 has a single transcript. 2021-10-25 09:35:34.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263464: ['FBtr0309763'] 2021-10-25 09:35:34.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263464 has a single transcript. 2021-10-25 09:35:34.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005778: ['FBtr0071806'] 2021-10-25 09:35:34.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005778 has a single transcript. 2021-10-25 09:35:34.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263465: ['FBtr0309764'] 2021-10-25 09:35:34.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263465 has a single transcript. 2021-10-25 09:35:34.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0005779: ['FBtr0077660'] 2021-10-25 09:35:34.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0005779 has a single transcript. 2021-10-25 09:35:34.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263466: ['FBtr0309765'] 2021-10-25 09:35:34.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263466 has a single transcript. 2021-10-25 09:35:34.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15799721, 15799792), (15800037, 15800095), (15800573, 15800638)] 2021-10-25 09:35:34.089 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263467: ['FBtr0309766'] 2021-10-25 09:35:34.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263467 has a single transcript. 2021-10-25 09:35:34.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0008635: ['FBtr0074576'] 2021-10-25 09:35:34.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0008635 has a single transcript. 2021-10-25 09:35:34.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263468: ['FBtr0309767'] 2021-10-25 09:35:34.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263468 has a single transcript. 2021-10-25 09:35:34.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0008636: ['FBtr0071556'] 2021-10-25 09:35:34.103 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0008636 has a single transcript. 2021-10-25 09:35:34.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263469: ['FBtr0309768'] 2021-10-25 09:35:34.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263469 has a single transcript. 2021-10-25 09:35:34.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263470: ['FBtr0309769'] 2021-10-25 09:35:34.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263470 has a single transcript. 2021-10-25 09:35:34.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0008646: ['FBtr0082880'] 2021-10-25 09:35:34.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0008646 has a single transcript. 2021-10-25 09:35:34.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263471: ['FBtr0309770'] 2021-10-25 09:35:34.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263471 has a single transcript. 2021-10-25 09:35:34.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0008651: ['FBtr0084092', 'FBtr0300061', 'FBtr0332438'] 2021-10-25 09:35:34.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263472: ['FBtr0309771'] 2021-10-25 09:35:34.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263472 has a single transcript. 2021-10-25 09:35:34.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263473: ['FBtr0309772'] 2021-10-25 09:35:34.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263473 has a single transcript. 2021-10-25 09:35:34.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263474: ['FBtr0309773'] 2021-10-25 09:35:34.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263474 has a single transcript. 2021-10-25 09:35:34.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263475: ['FBtr0309774'] 2021-10-25 09:35:34.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263475 has a single transcript. 2021-10-25 09:35:34.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030695: ['FBtr0074183', 'FBtr0307978'] 2021-10-25 09:35:34.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263476: ['FBtr0309775'] 2021-10-25 09:35:34.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263476 has a single transcript. 2021-10-25 09:35:34.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263477: ['FBtr0309776'] 2021-10-25 09:35:34.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263477 has a single transcript. 2021-10-25 09:35:34.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263478: ['FBtr0309777'] 2021-10-25 09:35:34.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263478 has a single transcript. 2021-10-25 09:35:34.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263479: ['FBtr0309778'] 2021-10-25 09:35:34.188 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263479 has a single transcript. 2021-10-25 09:35:34.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263480: ['FBtr0309779'] 2021-10-25 09:35:34.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263480 has a single transcript. 2021-10-25 09:35:34.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15801610, 15801682), (15801747, 15801962), (15802076, 15802139), (15802439, 15802508), (15803090, 15803326)] 2021-10-25 09:35:34.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21410650, 21410702), (21410785, 21411073), (21411252, 21433264), (21427103, 21433264)] 2021-10-25 09:35:34.203 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21409978, 21410785, 'FBtr0084092_exon_3') contains intron (21410650, 21410702) 2021-10-25 09:35:34.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084092_exon_3'] 2021-10-25 09:35:34.203 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.205 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263481: ['FBtr0309780'] 2021-10-25 09:35:34.205 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263481 has a single transcript. 2021-10-25 09:35:34.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263482: ['FBtr0309781'] 2021-10-25 09:35:34.213 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263482 has a single transcript. 2021-10-25 09:35:34.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263483: ['FBtr0309782'] 2021-10-25 09:35:34.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263483 has a single transcript. 2021-10-25 09:35:34.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263484: ['FBtr0309783'] 2021-10-25 09:35:34.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263484 has a single transcript. 2021-10-25 09:35:34.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051141: ['FBtr0084490'] 2021-10-25 09:35:34.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051141 has a single transcript. 2021-10-25 09:35:34.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263485: ['FBtr0309784', 'FBtr0433533'] 2021-10-25 09:35:34.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051143: ['FBtr0084482'] 2021-10-25 09:35:34.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051143 has a single transcript. 2021-10-25 09:35:34.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051144: ['FBtr0303864'] 2021-10-25 09:35:34.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051144 has a single transcript. 2021-10-25 09:35:34.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038099: ['FBtr0300278'] 2021-10-25 09:35:34.257 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038099 has a single transcript. 2021-10-25 09:35:34.257 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19164175, 19170617), (19164175, 19170685), (19164175, 19165163), (19165528, 19170685), (19165528, 19170617), (19166059, 19170617), (19170406, 19170617), (19171161, 19171252), (19171375, 19172178), (19172280, 19172344), (19172524, 19172711), (19172888, 19173431), (19172921, 19173431), (19173643, 19173703), (19174121, 19174338), (19174121, 19174576), (19174121, 19174881), (19174365, 19174576), (19174365, 19174881), (19174783, 19174881), (19175086, 19176247), (19175086, 19176187), (19175248, 19176187), (19175248, 19176247), (19175248, 19176265), (19175308, 19176187), (19176347, 19176415), (19176523, 19176587), (19176743, 19176940), (19176743, 19177818), (19176743, 19177302), (19177573, 19177818)] 2021-10-25 09:35:34.262 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038100: ['FBtr0082693', 'FBtr0334509'] 2021-10-25 09:35:34.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051145: ['FBtr0084479', 'FBtr0084480', 'FBtr0290056', 'FBtr0290057', 'FBtr0336459'] 2021-10-25 09:35:34.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030696: ['FBtr0074098'] 2021-10-25 09:35:34.269 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030696 has a single transcript. 2021-10-25 09:35:34.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030697: ['FBtr0074103'] 2021-10-25 09:35:34.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030697 has a single transcript. 2021-10-25 09:35:34.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:34.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030699: ['FBtr0074104', 'FBtr0340116', 'FBtr0346189'] 2021-10-25 09:35:34.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010014: ['FBtr0070764', 'FBtr0308348'] 2021-10-25 09:35:34.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12980860, 12981128), (12981387, 12983734), (12983883, 12983946), (12984047, 12984110)] 2021-10-25 09:35:34.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263486: ['FBtr0309785'] 2021-10-25 09:35:34.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263486 has a single transcript. 2021-10-25 09:35:34.346 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15844531, 15845326), (15844672, 15845326), (15845468, 15845641), (15845926, 15845983), (15846347, 15846408), (15846567, 15846956), (15847141, 15847202)] 2021-10-25 09:35:34.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263487: ['FBtr0309786'] 2021-10-25 09:35:34.353 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263487 has a single transcript. 2021-10-25 09:35:34.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5332518, 5333052), (5332827, 5333052), (5333100, 5333369)] 2021-10-25 09:35:34.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263488: ['FBtr0309787'] 2021-10-25 09:35:34.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263488 has a single transcript. 2021-10-25 09:35:34.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263489: ['FBtr0309788'] 2021-10-25 09:35:34.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263489 has a single transcript. 2021-10-25 09:35:34.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263490: ['FBtr0304915', 'FBtr0304912', 'FBtr0304913', 'FBtr0304914', 'FBtr0111012'] 2021-10-25 09:35:34.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038102: ['FBtr0082724'] 2021-10-25 09:35:34.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038102 has a single transcript. 2021-10-25 09:35:34.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038105: ['FBtr0082722'] 2021-10-25 09:35:34.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038105 has a single transcript. 2021-10-25 09:35:34.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23607049, 23607524), (23607665, 23608368), (23608481, 23608718), (23608799, 23611892), (23612136, 23614376), (23614469, 23615127), (23615206, 23616197), (23616322, 23622370), (23622649, 23626596), (23627460, 23653738), (23627460, 23631485), (23627460, 23635277), (23632186, 23632504), (23632687, 23635277), (23635321, 23653738), (23653768, 23668218), (23653768, 23659991), (23660044, 23668218), (23668340, 23669586), (23668467, 23669586)] 2021-10-25 09:35:34.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038106: ['FBtr0082695'] 2021-10-25 09:35:34.398 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038106 has a single transcript. 2021-10-25 09:35:34.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038107: ['FBtr0082721', 'FBtr0336813'] 2021-10-25 09:35:34.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010015: ['FBtr0085732', 'FBtr0304582', 'FBtr0334546'] 2021-10-25 09:35:34.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:34.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030700: ['FBtr0074105'] 2021-10-25 09:35:34.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030700 has a single transcript. 2021-10-25 09:35:34.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030701: ['FBtr0074114', 'FBtr0074115', 'FBtr0074116', 'FBtr0340041', 'FBtr0300801'] 2021-10-25 09:35:34.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31039528, 31039984), (31039548, 31039984), (31040310, 31041543), (31041875, 31041963), (31042075, 31042277), (31042423, 31042480), (31042698, 31042758), (31042852, 31043116), (31043242, 31043388), (31043470, 31043717), (31043470, 31044054), (31043795, 31044054), (31044139, 31044204), (31044302, 31046065)] 2021-10-25 09:35:34.493 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (31039373, 31040310, 'FBtr0334546_exon_1') contains intron (31039528, 31039984) 2021-10-25 09:35:34.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334546_exon_1'] 2021-10-25 09:35:34.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24585926, 24590571), (24589432, 24590571), (24591421, 24616050), (24620104, 24620378), (24620104, 24620169), (24620235, 24620378), (24621113, 24622275), (24621113, 24622921), (24622416, 24622921)] 2021-10-25 09:35:34.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038108: ['FBtr0306256', 'FBtr0306257', 'FBtr0334510', 'FBtr0334511', 'FBtr0334512'] 2021-10-25 09:35:34.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15870213, 15871360), (15870398, 15871360), (15870488, 15871360), (15870565, 15871360), (15870586, 15871360), (15871523, 15871858), (15871969, 15872029), (15872614, 15872691), (15875205, 15875306), (15875205, 15875267)] 2021-10-25 09:35:34.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.578 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010019: ['FBtr0070099'] 2021-10-25 09:35:34.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010019 has a single transcript. 2021-10-25 09:35:34.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010038: ['FBtr0082569'] 2021-10-25 09:35:34.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010038 has a single transcript. 2021-10-25 09:35:34.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051146: ['FBtr0081541', 'FBtr0305969'] 2021-10-25 09:35:34.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010039: ['FBtr0082570'] 2021-10-25 09:35:34.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010039 has a single transcript. 2021-10-25 09:35:34.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010040: ['FBtr0082571'] 2021-10-25 09:35:34.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010040 has a single transcript. 2021-10-25 09:35:34.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010041: ['FBtr0082572'] 2021-10-25 09:35:34.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010041 has a single transcript. 2021-10-25 09:35:34.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010042: ['FBtr0082573'] 2021-10-25 09:35:34.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010042 has a single transcript. 2021-10-25 09:35:34.665 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12999100, 12999440), (12999524, 12999582), (12999524, 12999594), (12999773, 12999851), (13000013, 13000070), (13000216, 13000390), (13000973, 13001078), (13001879, 13001948), (13001975, 13002628), (13002709, 13002770), (13002907, 13002969), (13005396, 13005467), (13006274, 13006345), (13007214, 13007391), (13007214, 13007524), (13007714, 13007781)] 2021-10-25 09:35:34.666 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7658353, 7662251), (7658668, 7662251), (7663203, 7666778), (7666976, 7667195), (7667348, 7667409), (7667598, 7667663), (7667835, 7672951), (7673083, 7675294), (7675462, 7686433), (7686623, 7690691), (7690843, 7691514), (7691630, 7691712)] 2021-10-25 09:35:34.667 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13006345, 13007477, 'FBtr0306257_exon_13') contains intron (13007214, 13007391) 2021-10-25 09:35:34.667 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.668 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13006345, 13007477, 'FBtr0334511_exon_13') contains intron (13007214, 13007391) 2021-10-25 09:35:34.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306257_exon_13', 'FBtr0334511_exon_13'] 2021-10-25 09:35:34.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010043: ['FBtr0082574'] 2021-10-25 09:35:34.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010043 has a single transcript. 2021-10-25 09:35:34.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010044: ['FBtr0082575'] 2021-10-25 09:35:34.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010044 has a single transcript. 2021-10-25 09:35:34.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010051: ['FBtr0078686', 'FBtr0078687', 'FBtr0344265'] 2021-10-25 09:35:34.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263492: ['FBtr0347578', 'FBtr0344962', 'FBtr0344963'] 2021-10-25 09:35:34.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051148: ['FBtr0084441'] 2021-10-25 09:35:34.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051148 has a single transcript. 2021-10-25 09:35:34.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051151: ['FBtr0110835', 'FBtr0310425', 'FBtr0310426', 'FBtr0310427'] 2021-10-25 09:35:34.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030703: ['FBtr0074166', 'FBtr0301598', 'FBtr0333719'] 2021-10-25 09:35:34.771 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5517888, 5527533), (5517888, 5527578), (5527919, 5528037), (5528108, 5528164), (5528280, 5528339), (5529144, 5529204), (5530424, 5530549), (5530719, 5530774), (5530930, 5530987), (5531141, 5531201), (5531343, 5531413), (5531343, 5531659), (5531440, 5531659), (5532306, 5532856), (5533348, 5533886), (5536652, 5536713), (5536906, 5536970), (5537093, 5537152), (5537325, 5537385), (5537550, 5537605), (5538031, 5538084)] 2021-10-25 09:35:34.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.773 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9379082, 9379166), (9379426, 9379485), (9380504, 9380567)] 2021-10-25 09:35:34.781 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9378159, 9379426, 'FBtr0344962_exon_1') contains intron (9379082, 9379166) 2021-10-25 09:35:34.781 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9379485, 9381119, 'FBtr0344962_exon_2') contains intron (9380504, 9380567) 2021-10-25 09:35:34.782 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9379485, 9381119, 'FBtr0344963_exon_3') contains intron (9380504, 9380567) 2021-10-25 09:35:34.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344962_exon_1', 'FBtr0344962_exon_2', 'FBtr0344963_exon_3'] 2021-10-25 09:35:34.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15888268, 15888343), (15888496, 15889301), (15889732, 15889908), (15889748, 15889908), (15889964, 15890031)] 2021-10-25 09:35:34.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15889908, 15890109, 'FBtr0074166_exon_1') contains intron (15889964, 15890031) 2021-10-25 09:35:34.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15889908, 15890109, 'FBtr0333719_exon_1') contains intron (15889964, 15890031) 2021-10-25 09:35:34.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074166_exon_1', 'FBtr0333719_exon_1'] 2021-10-25 09:35:34.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22711991, 22712056), (22712218, 22712294), (22712474, 22712804), (22713364, 22713584), (22713367, 22713584), (22713394, 22713584), (22713843, 22713906), (22714474, 22714533), (22716631, 22716933), (22716631, 22717206), (22716664, 22716933), (22716667, 22716933), (22717050, 22717206), (22717341, 22719870), (22720017, 22720078)] 2021-10-25 09:35:34.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038109: ['FBtr0082698'] 2021-10-25 09:35:34.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038109 has a single transcript. 2021-10-25 09:35:34.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263493: ['FBtr0309505'] 2021-10-25 09:35:34.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263493 has a single transcript. 2021-10-25 09:35:34.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010052: ['FBtr0087223', 'FBtr0340021', 'FBtr0301751'] 2021-10-25 09:35:34.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038110: ['FBtr0082719'] 2021-10-25 09:35:34.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038110 has a single transcript. 2021-10-25 09:35:34.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263494: ['FBtr0309507'] 2021-10-25 09:35:34.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263494 has a single transcript. 2021-10-25 09:35:34.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038113: ['FBtr0082705'] 2021-10-25 09:35:34.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034422: ['FBtr0086505'] 2021-10-25 09:35:34.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038113 has a single transcript. 2021-10-25 09:35:34.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034422 has a single transcript. 2021-10-25 09:35:34.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263495: ['FBtr0309508', 'FBtr0309509'] 2021-10-25 09:35:34.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038114: ['FBtr0300071'] 2021-10-25 09:35:34.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038114 has a single transcript. 2021-10-25 09:35:34.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034423: ['FBtr0086511'] 2021-10-25 09:35:34.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034423 has a single transcript. 2021-10-25 09:35:34.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034425: ['FBtr0086563'] 2021-10-25 09:35:34.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038115: ['FBtr0082715'] 2021-10-25 09:35:34.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034425 has a single transcript. 2021-10-25 09:35:34.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038115 has a single transcript. 2021-10-25 09:35:34.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030704: ['FBtr0074117'] 2021-10-25 09:35:34.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030704 has a single transcript. 2021-10-25 09:35:34.948 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034426: ['FBtr0086562'] 2021-10-25 09:35:34.948 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034426 has a single transcript. 2021-10-25 09:35:34.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038118: ['FBtr0082712'] 2021-10-25 09:35:34.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038118 has a single transcript. 2021-10-25 09:35:34.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030706: ['FBtr0074125', 'FBtr0340309', 'FBtr0301666'] 2021-10-25 09:35:34.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034427: ['FBtr0086561'] 2021-10-25 09:35:34.960 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3688901, 3689046)] 2021-10-25 09:35:34.960 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034427 has a single transcript. 2021-10-25 09:35:34.960 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3688785, 3689409, 'FBtr0309508_exon_1') contains intron (3688901, 3689046) 2021-10-25 09:35:34.961 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309508_exon_1'] 2021-10-25 09:35:34.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038122: ['FBtr0082732'] 2021-10-25 09:35:34.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038122 has a single transcript. 2021-10-25 09:35:34.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034428: ['FBtr0300592'] 2021-10-25 09:35:34.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034428 has a single transcript. 2021-10-25 09:35:34.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038123: ['FBtr0082783'] 2021-10-25 09:35:34.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038123 has a single transcript. 2021-10-25 09:35:34.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16119914, 16120398), (16120208, 16120398), (16120208, 16120410), (16120653, 16120715), (16120859, 16120965), (16121116, 16121182), (16121925, 16122096), (16122386, 16122452)] 2021-10-25 09:35:34.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:34.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:34.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034429: ['FBtr0086514'] 2021-10-25 09:35:34.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034429 has a single transcript. 2021-10-25 09:35:34.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038124: ['FBtr0300768'] 2021-10-25 09:35:34.986 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038124 has a single transcript. 2021-10-25 09:35:34.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051155: ['FBtr0083137'] 2021-10-25 09:35:34.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051155 has a single transcript. 2021-10-25 09:35:34.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034430: ['FBtr0086560'] 2021-10-25 09:35:34.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034430 has a single transcript. 2021-10-25 09:35:34.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038125: ['FBtr0082734'] 2021-10-25 09:35:34.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038125 has a single transcript. 2021-10-25 09:35:35.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051156: ['FBtr0084277'] 2021-10-25 09:35:35.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051156 has a single transcript. 2021-10-25 09:35:35.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038126: ['FBtr0082782'] 2021-10-25 09:35:35.008 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038126 has a single transcript. 2021-10-25 09:35:35.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034432: ['FBtr0300283', 'FBtr0345425'] 2021-10-25 09:35:35.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051157: ['FBtr0334518', 'FBtr0334519'] 2021-10-25 09:35:35.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038127: ['FBtr0082781'] 2021-10-25 09:35:35.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038127 has a single transcript. 2021-10-25 09:35:35.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038128: ['FBtr0082779'] 2021-10-25 09:35:35.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038128 has a single transcript. 2021-10-25 09:35:35.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038129: ['FBtr0082778'] 2021-10-25 09:35:35.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038129 has a single transcript. 2021-10-25 09:35:35.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038130: ['FBtr0082737'] 2021-10-25 09:35:35.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038130 has a single transcript. 2021-10-25 09:35:35.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15910988, 15911907), (15911654, 15911907), (15912123, 15912778), (15914094, 15914155), (15914277, 15914349), (15914541, 15914605), (15916071, 15916473), (15916689, 15916782), (15918014, 15918065), (15918457, 15918516), (15918642, 15918707), (15918825, 15918886), (15919385, 15919528), (15919686, 15919743), (15919686, 15919740)] 2021-10-25 09:35:35.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263496: ['FBtr0309510'] 2021-10-25 09:35:35.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263496 has a single transcript. 2021-10-25 09:35:35.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038131: ['FBtr0100257'] 2021-10-25 09:35:35.050 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038131 has a single transcript. 2021-10-25 09:35:35.056 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263497: ['FBtr0309515', 'FBtr0347026'] 2021-10-25 09:35:35.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038132: ['FBtr0082776'] 2021-10-25 09:35:35.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038132 has a single transcript. 2021-10-25 09:35:35.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038133: ['FBtr0082738'] 2021-10-25 09:35:35.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038133 has a single transcript. 2021-10-25 09:35:35.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13047921, 13048004), (13047926, 13048004), (13048259, 13048312), (13048645, 13048704), (13049030, 13049080)] 2021-10-25 09:35:35.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.070 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038134: ['FBtr0082775'] 2021-10-25 09:35:35.071 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038134 has a single transcript. 2021-10-25 09:35:35.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:35.074 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.083 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038135: ['FBtr0290037'] 2021-10-25 09:35:35.083 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038135 has a single transcript. 2021-10-25 09:35:35.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038136: ['FBtr0082740', 'FBtr0082741'] 2021-10-25 09:35:35.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6126617, 6126674)] 2021-10-25 09:35:35.107 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6126476, 6126876, 'FBtr0309515_exon_1') contains intron (6126617, 6126674) 2021-10-25 09:35:35.107 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309515_exon_1'] 2021-10-25 09:35:35.107 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010053: ['FBtr0086625'] 2021-10-25 09:35:35.112 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010053 has a single transcript. 2021-10-25 09:35:35.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010078: ['FBtr0071897'] 2021-10-25 09:35:35.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010078 has a single transcript. 2021-10-25 09:35:35.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010097: ['FBtr0081228', 'FBtr0332572'] 2021-10-25 09:35:35.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034433: ['FBtr0086558', 'FBtr0086559', 'FBtr0113097', 'FBtr0113098'] 2021-10-25 09:35:35.159 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13298951, 13299040), (13299202, 13299260), (13299616, 13299750), (13299895, 13299949), (13300483, 13300545), (13301474, 13301555)] 2021-10-25 09:35:35.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051158: ['FBtr0113395', 'FBtr0113396', 'FBtr0302187', 'FBtr0334559', 'FBtr0334560'] 2021-10-25 09:35:35.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030707: ['FBtr0301232', 'FBtr0301233'] 2021-10-25 09:35:35.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263498: ['FBtr0309513', 'FBtr0309514'] 2021-10-25 09:35:35.185 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19184573, 19184632), (19185223, 19185331), (19185534, 19185603)] 2021-10-25 09:35:35.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6127412, 6127468)] 2021-10-25 09:35:35.238 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6127228, 6127955, 'FBtr0309514_exon_1') contains intron (6127412, 6127468) 2021-10-25 09:35:35.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309514_exon_1'] 2021-10-25 09:35:35.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15922139, 15922468), (15922139, 15922628), (15923107, 15923167), (15923250, 15923319), (15923522, 15923591), (15924158, 15924216)] 2021-10-25 09:35:35.244 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.244 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010100: ['FBtr0081473', 'FBtr0300425', 'FBtr0343871', 'FBtr0346587'] 2021-10-25 09:35:35.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038139: ['FBtr0082773', 'FBtr0082774'] 2021-10-25 09:35:35.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19308515, 19308572), (19308515, 19309026), (19308813, 19309392), (19309231, 19309392), (19309583, 19309815), (19309583, 19309662), (19309698, 19309815), (19310313, 19310474)] 2021-10-25 09:35:35.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22588418, 22599218), (22599285, 22599361), (22599415, 22599673), (22600476, 22600544), (22601666, 22602195), (22601666, 22602844), (22602435, 22602844), (22603061, 22603463), (22603923, 22603989), (22604376, 22604429), (22604593, 22604651), (22604749, 22604815), (22605091, 22605154), (22605292, 22605352), (22605570, 22606827), (22605570, 22607196), (22605570, 22605817), (22607040, 22607391), (22607308, 22607388), (22607308, 22607391)] 2021-10-25 09:35:35.294 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22602844, 22603923, 'FBtr0113396_exon_6') contains intron (22603061, 22603463) 2021-10-25 09:35:35.294 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13329955, 13330202), (13330316, 13330471), (13330686, 13330754), (13330953, 13331271), (13331404, 13331483), (13331649, 13331896), (13332428, 13332743), (13332818, 13333889), (13332838, 13333889)] 2021-10-25 09:35:35.294 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22602844, 22603923, 'FBtr0334559_exon_7') contains intron (22603061, 22603463) 2021-10-25 09:35:35.294 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13331896, 13332818, 'FBtr0082773_exon_2') contains intron (13332428, 13332743) 2021-10-25 09:35:35.295 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22602844, 22603923, 'FBtr0334560_exon_6') contains intron (22603061, 22603463) 2021-10-25 09:35:35.295 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082773_exon_2'] 2021-10-25 09:35:35.295 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113396_exon_6', 'FBtr0334559_exon_7', 'FBtr0334560_exon_6'] 2021-10-25 09:35:35.295 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.295 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030710: ['FBtr0074130'] 2021-10-25 09:35:35.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030710 has a single transcript. 2021-10-25 09:35:35.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263499: ['FBtr0309519', 'FBtr0309520', 'FBtr0309521'] 2021-10-25 09:35:35.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030711: ['FBtr0074132', 'FBtr0342745'] 2021-10-25 09:35:35.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21168804, 21170190), (21171828, 21171894), (21172398, 21172459)] 2021-10-25 09:35:35.340 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.340 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038140: ['FBtr0082745'] 2021-10-25 09:35:35.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038140 has a single transcript. 2021-10-25 09:35:35.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038142: ['FBtr0082749'] 2021-10-25 09:35:35.359 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038142 has a single transcript. 2021-10-25 09:35:35.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15945328, 15945396)] 2021-10-25 09:35:35.367 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.367 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038143: ['FBtr0082769', 'FBtr0082770', 'FBtr0082765', 'FBtr0082766', 'FBtr0082767', 'FBtr0082768', 'FBtr0335460'] 2021-10-25 09:35:35.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19744169, 19744246), (19744169, 19744240)] 2021-10-25 09:35:35.376 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19743788, 19744477, 'FBtr0309521_exon_1') contains intron (19744169, 19744246) 2021-10-25 09:35:35.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309521_exon_1'] 2021-10-25 09:35:35.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030715: ['FBtr0074133'] 2021-10-25 09:35:35.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030715 has a single transcript. 2021-10-25 09:35:35.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034435: ['FBtr0086518', 'FBtr0304055'] 2021-10-25 09:35:35.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030716: ['FBtr0074154', 'FBtr0074153', 'FBtr0346191'] 2021-10-25 09:35:35.477 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19342371, 19342567), (19342951, 19343012), (19342951, 19343018), (19343191, 19343253), (19343430, 19343564), (19343711, 19343781), (19344045, 19344223)] 2021-10-25 09:35:35.478 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.478 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263500: ['FBtr0309518'] 2021-10-25 09:35:35.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263500 has a single transcript. 2021-10-25 09:35:35.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010105: ['FBtr0075579', 'FBtr0333023'] 2021-10-25 09:35:35.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263501: ['FBtr0309517'] 2021-10-25 09:35:35.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263501 has a single transcript. 2021-10-25 09:35:35.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051159: ['FBtr0084270', 'FBtr0344226'] 2021-10-25 09:35:35.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263502: ['FBtr0309522'] 2021-10-25 09:35:35.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263502 has a single transcript. 2021-10-25 09:35:35.508 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15981672, 15981738), (15981850, 15982363), (15982689, 15982761)] 2021-10-25 09:35:35.508 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15982363, 15982944, 'FBtr0074153_exon_1') contains intron (15982689, 15982761) 2021-10-25 09:35:35.509 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15982363, 15982944, 'FBtr0346191_exon_1') contains intron (15982689, 15982761) 2021-10-25 09:35:35.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074153_exon_1', 'FBtr0346191_exon_1'] 2021-10-25 09:35:35.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263503: ['FBtr0309523'] 2021-10-25 09:35:35.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263503 has a single transcript. 2021-10-25 09:35:35.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263504: ['FBtr0309524'] 2021-10-25 09:35:35.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263504 has a single transcript. 2021-10-25 09:35:35.524 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263505: ['FBtr0309525'] 2021-10-25 09:35:35.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263505 has a single transcript. 2021-10-25 09:35:35.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263506: ['FBtr0309526'] 2021-10-25 09:35:35.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263506 has a single transcript. 2021-10-25 09:35:35.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13374015, 13374078), (13374208, 13374278), (13374370, 13374446), (13374780, 13377532), (13377661, 13378401), (13377661, 13377889), (13378285, 13378401), (13378318, 13378401), (13378784, 13379002), (13379110, 13379684), (13379110, 13379433), (13379110, 13379619), (13379110, 13379689)] 2021-10-25 09:35:35.540 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22613896, 22613960), (22614123, 22614180), (22614473, 22614526), (22614896, 22614953), (22615176, 22615228), (22615740, 22615806), (22615740, 22615801), (22616015, 22616073), (22616223, 22616277)] 2021-10-25 09:35:35.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263507: ['FBtr0309527', 'FBtr0309528'] 2021-10-25 09:35:35.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034436: ['FBtr0086519', 'FBtr0086520', 'FBtr0308495'] 2021-10-25 09:35:35.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15723271, 15727696)] 2021-10-25 09:35:35.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.584 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6758953, 6759424)] 2021-10-25 09:35:35.585 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6758609, 6759491, 'FBtr0309527_exon_1') contains intron (6758953, 6759424) 2021-10-25 09:35:35.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309527_exon_1'] 2021-10-25 09:35:35.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051161: ['FBtr0304668'] 2021-10-25 09:35:35.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051161 has a single transcript. 2021-10-25 09:35:35.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010109: ['FBtr0088803'] 2021-10-25 09:35:35.598 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010109 has a single transcript. 2021-10-25 09:35:35.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051162: ['FBtr0084233'] 2021-10-25 09:35:35.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051162 has a single transcript. 2021-10-25 09:35:35.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030717: ['FBtr0074134'] 2021-10-25 09:35:35.604 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030717 has a single transcript. 2021-10-25 09:35:35.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010113: ['FBtr0085619', 'FBtr0085620', 'FBtr0085621', 'FBtr0330311'] 2021-10-25 09:35:35.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030718: ['FBtr0074152', 'FBtr0074151', 'FBtr0340417'] 2021-10-25 09:35:35.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051163: ['FBtr0084197', 'FBtr0310203', 'FBtr0330381', 'FBtr0301028', 'FBtr0336712', 'FBtr0305036', 'FBtr0305037'] 2021-10-25 09:35:35.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19357838, 19359185), (19358500, 19359185), (19359844, 19359908), (19360269, 19360328), (19360712, 19360766), (19360947, 19361010), (19361339, 19361396), (19361496, 19361555), (19361658, 19361720), (19361913, 19361969), (19362062, 19362123)] 2021-10-25 09:35:35.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263509: ['FBtr0309530'] 2021-10-25 09:35:35.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263509 has a single transcript. 2021-10-25 09:35:35.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263510: ['FBtr0088228'] 2021-10-25 09:35:35.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263510 has a single transcript. 2021-10-25 09:35:35.685 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15986683, 15986737), (15986686, 15986737)] 2021-10-25 09:35:35.686 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15985848, 15986745, 'FBtr0074152_exon_1') contains intron (15986683, 15986737) 2021-10-25 09:35:35.686 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074152_exon_1'] 2021-10-25 09:35:35.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263511: ['FBtr0070781', 'FBtr0340495'] 2021-10-25 09:35:35.713 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30280247, 30309151), (30309248, 30358249), (30358115, 30358249), (30358438, 30359972), (30360061, 30360141), (30360241, 30360366)] 2021-10-25 09:35:35.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.728 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085619': ['FBtr0085621']} 2021-10-25 09:35:35.728 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0085621']] 2021-10-25 09:35:35.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5595090, 5606084), (5606860, 5610844)] 2021-10-25 09:35:35.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034437: ['FBtr0086521'] 2021-10-25 09:35:35.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034437 has a single transcript. 2021-10-25 09:35:35.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034438: ['FBtr0086555', 'FBtr0334008'] 2021-10-25 09:35:35.794 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22134451, 22142173), (22142223, 22149366), (22149422, 22173931), (22149422, 22159892), (22160093, 22173931), (22174727, 22278351), (22174727, 22277636), (22277972, 22278351), (22278626, 22278705), (22278755, 22279228), (22279335, 22280798), (22280885, 22281846), (22281903, 22284877), (22284935, 22285471), (22285590, 22287796), (22285701, 22287796), (22287960, 22289479), (22289561, 22290077), (22290296, 22291161), (22291354, 22292312), (22292458, 22292612), (22292878, 22292949), (22293071, 22293437), (22293071, 22293458)] 2021-10-25 09:35:35.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263512: ['FBtr0100024', 'FBtr0343015'] 2021-10-25 09:35:35.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030719: ['FBtr0074147', 'FBtr0074146', 'FBtr0074144', 'FBtr0074148', 'FBtr0074145', 'FBtr0074150', 'FBtr0074149'] 2021-10-25 09:35:35.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19367646, 19367707), (19367990, 19368047), (19368259, 19368321), (19368647, 19368710), (19368891, 19368954), (19369338, 19369403), (19369558, 19369615), (19369736, 19369797), (19369882, 19369943), (19370620, 19372990), (19370620, 19373589)] 2021-10-25 09:35:35.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010114: ['FBtr0088606', 'FBtr0088607', 'FBtr0088608', 'FBtr0100119'] 2021-10-25 09:35:35.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038144: ['FBtr0082750'] 2021-10-25 09:35:35.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038144 has a single transcript. 2021-10-25 09:35:35.830 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084197': ['FBtr0330381']} 2021-10-25 09:35:35.830 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330381']] 2021-10-25 09:35:35.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038145: ['FBtr0082751', 'FBtr0082752', 'FBtr0082753', 'FBtr0082754', 'FBtr0082755'] 2021-10-25 09:35:35.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5529411, 5529494), (5530146, 5531254), (5530146, 5531269), (5531444, 5546724), (5546945, 5553454), (5553505, 5559409)] 2021-10-25 09:35:35.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034439: ['FBtr0086522', 'FBtr0334005', 'FBtr0334006'] 2021-10-25 09:35:35.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263581: ['FBtr0309806'] 2021-10-25 09:35:35.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263581 has a single transcript. 2021-10-25 09:35:35.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263582: ['FBtr0309807', 'FBtr0309808'] 2021-10-25 09:35:35.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9228787, 9229093), (9229276, 9229597), (9230086, 9230311), (9230648, 9231105), (9230648, 9231747), (9231180, 9231747), (9231845, 9232507), (9232732, 9234444), (9235575, 9246764)] 2021-10-25 09:35:35.919 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9227784, 9229276, 'FBtr0088608_exon_7') contains intron (9228787, 9229093) 2021-10-25 09:35:35.919 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9227784, 9229276, 'FBtr0100119_exon_8') contains intron (9228787, 9229093) 2021-10-25 09:35:35.919 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088608_exon_7', 'FBtr0100119_exon_8'] 2021-10-25 09:35:35.920 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19375524, 19375594), (19375914, 19377019), (19376783, 19377019), (19377687, 19377761), (19378119, 19378174), (19378739, 19378801), (19378986, 19379054), (19379198, 19379260), (19379360, 19379423), (19379818, 19379881), (19379818, 19379860), (19379818, 19379878)] 2021-10-25 09:35:35.959 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20437624, 20438338), (20437624, 20437694)] 2021-10-25 09:35:35.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:35.963 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:35.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13382144, 13382203), (13382258, 13383463), (13383112, 13383463), (13383344, 13383463), (13384579, 13384669)] 2021-10-25 09:35:35.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13382105, 13382258, 'FBtr0082751_exon_1') contains intron (13382144, 13382203) 2021-10-25 09:35:35.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13383333, 13384579, 'FBtr0082754_exon_1') contains intron (13383344, 13383463) 2021-10-25 09:35:35.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082751_exon_1', 'FBtr0082754_exon_1'] 2021-10-25 09:35:35.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263583: ['FBtr0343803', 'FBtr0309809'] 2021-10-25 09:35:36.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051164: ['FBtr0084193'] 2021-10-25 09:35:36.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051164 has a single transcript. 2021-10-25 09:35:36.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051165: ['FBtr0084222'] 2021-10-25 09:35:36.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051165 has a single transcript. 2021-10-25 09:35:36.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051166: ['FBtr0084223'] 2021-10-25 09:35:36.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051166 has a single transcript. 2021-10-25 09:35:36.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034440: ['FBtr0086523', 'FBtr0310321'] 2021-10-25 09:35:36.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051167: ['FBtr0084232'] 2021-10-25 09:35:36.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051167 has a single transcript. 2021-10-25 09:35:36.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010173: ['FBtr0081867'] 2021-10-25 09:35:36.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010173 has a single transcript. 2021-10-25 09:35:36.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:36.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051174: ['FBtr0084154', 'FBtr0334879'] 2021-10-25 09:35:36.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010194: ['FBtr0074623', 'FBtr0343046'] 2021-10-25 09:35:36.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15987989, 15988067), (15988544, 15988616), (15989109, 15989437), (15989109, 15989391), (15989268, 15989391), (15989476, 15989853), (15989950, 15991082), (15989950, 15990044), (15991382, 15991892), (15991382, 15991821), (15991382, 15991750)] 2021-10-25 09:35:36.116 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15988616, 15989476, 'FBtr0074150_exon_3') contains intron (15989109, 15989437) 2021-10-25 09:35:36.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074150_exon_3'] 2021-10-25 09:35:36.116 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19380615, 19381755), (19381696, 19381755), (19382450, 19382510), (19382595, 19382653), (19382774, 19382839), (19382994, 19383045), (19383429, 19383488), (19383784, 19383842), (19383912, 19383978), (19384125, 19384182), (19384668, 19384730)] 2021-10-25 09:35:36.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21868979, 21869038), (21868982, 21869038), (21869161, 21869218)] 2021-10-25 09:35:36.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:36.138 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.138 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263584: ['FBtr0309810'] 2021-10-25 09:35:36.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263584 has a single transcript. 2021-10-25 09:35:36.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263585: ['FBtr0309811'] 2021-10-25 09:35:36.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263585 has a single transcript. 2021-10-25 09:35:36.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263586: ['FBtr0309820', 'FBtr0309821'] 2021-10-25 09:35:36.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038146: ['FBtr0082763'] 2021-10-25 09:35:36.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038146 has a single transcript. 2021-10-25 09:35:36.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034441: ['FBtr0086524', 'FBtr0334007'] 2021-10-25 09:35:36.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051176: ['FBtr0084114'] 2021-10-25 09:35:36.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051176 has a single transcript. 2021-10-25 09:35:36.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038147: ['FBtr0082762', 'FBtr0303262', 'FBtr0303263'] 2021-10-25 09:35:36.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010197: ['FBtr0112856', 'FBtr0343625', 'FBtr0346610'] 2021-10-25 09:35:36.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051183: ['FBtr0083187', 'FBtr0346151'] 2021-10-25 09:35:36.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6707375, 6708548), (6708488, 6708548), (6708634, 6708718)] 2021-10-25 09:35:36.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19385988, 19386089), (19386784, 19386846), (19386931, 19386998), (19387119, 19387179), (19387334, 19387396), (19387780, 19387838), (19387780, 19387844), (19388134, 19388196), (19388266, 19388325), (19388472, 19388541), (19389033, 19389091)] 2021-10-25 09:35:36.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.263 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15859939, 15859997), (15860181, 15861770), (15861935, 15862088), (15862817, 15862983), (15863410, 15864784), (15864929, 15866452), (15866567, 15869172), (15870232, 15875577)] 2021-10-25 09:35:36.264 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.264 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263587: ['FBtr0309822', 'FBtr0309823'] 2021-10-25 09:35:36.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13389759, 13390047), (13390295, 13391864), (13391945, 13392789), (13391945, 13392830), (13391945, 13395060)] 2021-10-25 09:35:36.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11139178, 11139234), (11139393, 11139459), (11139666, 11139719), (11139912, 11139967), (11140108, 11140175), (11140365, 11140439), (11140609, 11140793), (11141104, 11141166), (11141264, 11141320), (11141387, 11141451), (11141560, 11141616), (11141798, 11141854), (11142007, 11142087), (11142240, 11142330), (11142240, 11142646), (11142415, 11142646), (11142415, 11142775), (11142647, 11142775), (11142647, 11142948), (11142884, 11142948), (11143098, 11143164), (11143288, 11143338), (11143446, 11143508), (11143583, 11143912), (11144024, 11144143), (11144277, 11148707)] 2021-10-25 09:35:36.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034442: ['FBtr0086525'] 2021-10-25 09:35:36.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034442 has a single transcript. 2021-10-25 09:35:36.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034443: ['FBtr0086551'] 2021-10-25 09:35:36.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034443 has a single transcript. 2021-10-25 09:35:36.324 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12542493, 12542562), (12542493, 12542581)] 2021-10-25 09:35:36.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034446: ['FBtr0086534', 'FBtr0340534'] 2021-10-25 09:35:36.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051184: ['FBtr0084505', 'FBtr0300648'] 2021-10-25 09:35:36.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19444394, 19444446), (19444394, 19444443), (19444578, 19444633), (19444762, 19444829)] 2021-10-25 09:35:36.380 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.380 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23996538, 23996591), (23996705, 23996765)] 2021-10-25 09:35:36.383 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.383 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038148: ['FBtr0082756', 'FBtr0335458'] 2021-10-25 09:35:36.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263588: ['FBtr0309824'] 2021-10-25 09:35:36.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263588 has a single transcript. 2021-10-25 09:35:36.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263589: ['FBtr0309825'] 2021-10-25 09:35:36.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263589 has a single transcript. 2021-10-25 09:35:36.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010198: ['FBtr0073792', 'FBtr0073793', 'FBtr0073794', 'FBtr0073795', 'FBtr0300828'] 2021-10-25 09:35:36.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030720: ['FBtr0074138'] 2021-10-25 09:35:36.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030720 has a single transcript. 2021-10-25 09:35:36.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263590: ['FBtr0309826'] 2021-10-25 09:35:36.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263590 has a single transcript. 2021-10-25 09:35:36.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030721: ['FBtr0074139'] 2021-10-25 09:35:36.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030721 has a single transcript. 2021-10-25 09:35:36.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030722: ['FBtr0074260'] 2021-10-25 09:35:36.431 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030722 has a single transcript. 2021-10-25 09:35:36.437 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:36.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030723: ['FBtr0074206'] 2021-10-25 09:35:36.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030723 has a single transcript. 2021-10-25 09:35:36.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051189: ['FBtr0300817'] 2021-10-25 09:35:36.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051189 has a single transcript. 2021-10-25 09:35:36.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263593: ['FBtr0303577', 'FBtr0303580', 'FBtr0088815', 'FBtr0303578', 'FBtr0303573', 'FBtr0303583', 'FBtr0303574', 'FBtr0303585', 'FBtr0113055', 'FBtr0303584', 'FBtr0303575'] 2021-10-25 09:35:36.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030724: ['FBtr0074259', 'FBtr0074258', 'FBtr0074257', 'FBtr0343595'] 2021-10-25 09:35:36.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034447: ['FBtr0086535'] 2021-10-25 09:35:36.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034447 has a single transcript. 2021-10-25 09:35:36.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051191: ['FBtr0083984', 'FBtr0344322'] 2021-10-25 09:35:36.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034451: ['FBtr0086502'] 2021-10-25 09:35:36.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034451 has a single transcript. 2021-10-25 09:35:36.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034452: ['FBtr0086501'] 2021-10-25 09:35:36.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034452 has a single transcript. 2021-10-25 09:35:36.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034454: ['FBtr0086463'] 2021-10-25 09:35:36.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034454 has a single transcript. 2021-10-25 09:35:36.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034455: ['FBtr0086464', 'FBtr0345929'] 2021-10-25 09:35:36.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20911912, 20911970), (20912077, 20912141), (20912340, 20912409), (20912669, 20930162), (20930945, 20945163)] 2021-10-25 09:35:36.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038149: ['FBtr0082760'] 2021-10-25 09:35:36.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038149 has a single transcript. 2021-10-25 09:35:36.504 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083984': ['FBtr0344322']} 2021-10-25 09:35:36.505 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0344322']] 2021-10-25 09:35:36.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038150: ['FBtr0082759'] 2021-10-25 09:35:36.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038150 has a single transcript. 2021-10-25 09:35:36.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051195: ['FBtr0302188'] 2021-10-25 09:35:36.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051195 has a single transcript. 2021-10-25 09:35:36.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038151: ['FBtr0302576'] 2021-10-25 09:35:36.516 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038151 has a single transcript. 2021-10-25 09:35:36.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051198: ['FBtr0084128'] 2021-10-25 09:35:36.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051198 has a single transcript. 2021-10-25 09:35:36.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038153: ['FBtr0336956'] 2021-10-25 09:35:36.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038153 has a single transcript. 2021-10-25 09:35:36.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051199: ['FBtr0083930'] 2021-10-25 09:35:36.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051199 has a single transcript. 2021-10-25 09:35:36.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:36.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.533 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038156: ['FBtr0309090', 'FBtr0303259'] 2021-10-25 09:35:36.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13336379, 13337504), (13337539, 13337602), (13337539, 13337610), (13337539, 13337606)] 2021-10-25 09:35:36.539 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13337504, 13337638, 'FBtr0073794_exon_1') contains intron (13337539, 13337602) 2021-10-25 09:35:36.539 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13337504, 13337638, 'FBtr0073795_exon_1') contains intron (13337539, 13337602) 2021-10-25 09:35:36.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073794_exon_1', 'FBtr0073795_exon_1'] 2021-10-25 09:35:36.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051200: ['FBtr0083929'] 2021-10-25 09:35:36.541 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051200 has a single transcript. 2021-10-25 09:35:36.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051201: ['FBtr0110837'] 2021-10-25 09:35:36.549 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051201 has a single transcript. 2021-10-25 09:35:36.556 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16070868, 16071034), (16071177, 16071237), (16071531, 16071720), (16071900, 16073026), (16073100, 16073402), (16073141, 16073402), (16073431, 16073509)] 2021-10-25 09:35:36.557 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16073402, 16073568, 'FBtr0074259_exon_1') contains intron (16073431, 16073509) 2021-10-25 09:35:36.557 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16073402, 16073568, 'FBtr0074258_exon_1') contains intron (16073431, 16073509) 2021-10-25 09:35:36.558 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074259_exon_1', 'FBtr0074258_exon_1'] 2021-10-25 09:35:36.558 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051202: ['FBtr0085510'] 2021-10-25 09:35:36.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051202 has a single transcript. 2021-10-25 09:35:36.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051204: ['FBtr0085814'] 2021-10-25 09:35:36.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051204 has a single transcript. 2021-10-25 09:35:36.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051205: ['FBtr0300451', 'FBtr0346092'] 2021-10-25 09:35:36.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13450724, 13452217), (13450928, 13452217), (13452430, 13455772), (13456273, 13456791), (13457111, 13457462), (13457666, 13457734), (13457886, 13458149), (13458294, 13458372), (13458503, 13458845), (13459005, 13459847), (13460017, 13460086), (13460210, 13460288), (13460449, 13461023), (13461165, 13461241), (13461365, 13461436), (13461798, 13462012), (13462224, 13462521)] 2021-10-25 09:35:36.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034456: ['FBtr0086465'] 2021-10-25 09:35:36.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034456 has a single transcript. 2021-10-25 09:35:36.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034457: ['FBtr0086466'] 2021-10-25 09:35:36.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034457 has a single transcript. 2021-10-25 09:35:36.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034458: ['FBtr0086497'] 2021-10-25 09:35:36.621 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034458 has a single transcript. 2021-10-25 09:35:36.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034459: ['FBtr0300829'] 2021-10-25 09:35:36.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034459 has a single transcript. 2021-10-25 09:35:36.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034460: ['FBtr0086469'] 2021-10-25 09:35:36.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034460 has a single transcript. 2021-10-25 09:35:36.639 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20731715, 20731772)] 2021-10-25 09:35:36.640 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.640 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034461: ['FBtr0086470'] 2021-10-25 09:35:36.644 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034461 has a single transcript. 2021-10-25 09:35:36.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034462: ['FBtr0303023', 'FBtr0336983'] 2021-10-25 09:35:36.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038157: ['FBtr0082791'] 2021-10-25 09:35:36.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038157 has a single transcript. 2021-10-25 09:35:36.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038158: ['FBtr0082788'] 2021-10-25 09:35:36.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038158 has a single transcript. 2021-10-25 09:35:36.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038159: ['FBtr0082789'] 2021-10-25 09:35:36.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038159 has a single transcript. 2021-10-25 09:35:36.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038160: ['FBtr0082861', 'FBtr0344643', 'FBtr0082862'] 2021-10-25 09:35:36.699 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19646661, 19646752), (19646664, 19646752), (19647279, 19647367)] 2021-10-25 09:35:36.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051206: ['FBtr0083875', 'FBtr0334557'] 2021-10-25 09:35:36.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030725: ['FBtr0074207'] 2021-10-25 09:35:36.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030725 has a single transcript. 2021-10-25 09:35:36.732 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8137682, 8138937), (8138592, 8138937), (8139041, 8139121), (8139622, 8139678), (8139890, 8139953), (8140149, 8140242), (8140149, 8140513), (8140371, 8140513), (8140613, 8140680), (8140616, 8140680), (8141820, 8142098), (8141820, 8141890), (8142028, 8142098), (8142307, 8142441), (8142307, 8142642), (8143074, 8156054), (8143074, 8145754), (8143074, 8145751), (8143074, 8145641)] 2021-10-25 09:35:36.735 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030729: ['FBtr0290087'] 2021-10-25 09:35:36.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030729 has a single transcript. 2021-10-25 09:35:36.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20107331, 20107395), (20107500, 20107572), (20107524, 20107572), (20107778, 20107838)] 2021-10-25 09:35:36.742 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030731: ['FBtr0074209', 'FBtr0340442'] 2021-10-25 09:35:36.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010213: ['FBtr0087078', 'FBtr0345492'] 2021-10-25 09:35:36.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034463: ['FBtr0086471', 'FBtr0340595'] 2021-10-25 09:35:36.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13607691, 13608738)] 2021-10-25 09:35:36.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13607369, 13609246, 'FBtr0344643_exon_1') contains intron (13607691, 13608738) 2021-10-25 09:35:36.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344643_exon_1'] 2021-10-25 09:35:36.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19657876, 19658660), (19658599, 19658660), (19658821, 19658910), (19659083, 19659166)] 2021-10-25 09:35:36.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16773638, 16773754)] 2021-10-25 09:35:36.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.809 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16271096, 16271440), (16272228, 16272524)] 2021-10-25 09:35:36.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051207: ['FBtr0084044'] 2021-10-25 09:35:36.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051207 has a single transcript. 2021-10-25 09:35:36.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051211: ['FBtr0082479', 'FBtr0082480', 'FBtr0082481'] 2021-10-25 09:35:36.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030733: ['FBtr0074216'] 2021-10-25 09:35:36.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030733 has a single transcript. 2021-10-25 09:35:36.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038161: ['FBtr0082794'] 2021-10-25 09:35:36.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038161 has a single transcript. 2021-10-25 09:35:36.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034464: ['FBtr0086472'] 2021-10-25 09:35:36.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034464 has a single transcript. 2021-10-25 09:35:36.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010215: ['FBtr0070038', 'FBtr0339894'] 2021-10-25 09:35:36.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030734: ['FBtr0074241', 'FBtr0074242', 'FBtr0074243', 'FBtr0074244'] 2021-10-25 09:35:36.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038163: ['FBtr0082795', 'FBtr0309093'] 2021-10-25 09:35:36.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034467: ['FBtr0086481'] 2021-10-25 09:35:36.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034467 has a single transcript. 2021-10-25 09:35:36.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034468: ['FBtr0086476'] 2021-10-25 09:35:36.894 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034468 has a single transcript. 2021-10-25 09:35:36.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034470: ['FBtr0086477', 'FBtr0345676'] 2021-10-25 09:35:36.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11950354, 11950426), (11950784, 11950857), (11951011, 11951249), (11951492, 11951722), (11951825, 11952181), (11952238, 11952640), (11952238, 11952668), (11952765, 11952826), (11953055, 11953112)] 2021-10-25 09:35:36.902 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11952826, 11954038, 'FBtr0082480_exon_8') contains intron (11953055, 11953112) 2021-10-25 09:35:36.903 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11952826, 11954038, 'FBtr0082481_exon_8') contains intron (11953055, 11953112) 2021-10-25 09:35:36.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082480_exon_8', 'FBtr0082481_exon_8'] 2021-10-25 09:35:36.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23319002, 23319060), (23319177, 23319233), (23319474, 23325641), (23325823, 23325888), (23325956, 23326687), (23326760, 23327493), (23327645, 23328713), (23329398, 23329885), (23330089, 23330697), (23331015, 23334363), (23334740, 23337874)] 2021-10-25 09:35:36.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23328713, 23330089, 'FBtr0339894_exon_4') contains intron (23329398, 23329885) 2021-10-25 09:35:36.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339894_exon_4'] 2021-10-25 09:35:36.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.929 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13632097, 13632174), (13632097, 13632177), (13632301, 13632374), (13632518, 13632577), (13632750, 13632810), (13633017, 13633078), (13633460, 13633524), (13633735, 13633794), (13634232, 13634293)] 2021-10-25 09:35:36.930 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19703632, 19703702)] 2021-10-25 09:35:36.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.981 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16294040, 16294114), (16294313, 16294387), (16294654, 16294724), (16295118, 16295222), (16295314, 16296046), (16296131, 16296309), (16296484, 16296859), (16296484, 16297641)] 2021-10-25 09:35:36.982 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:36.983 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:36.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038165: ['FBtr0301654', 'FBtr0334492', 'FBtr0334493', 'FBtr0334494'] 2021-10-25 09:35:36.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010217: ['FBtr0089186', 'FBtr0344754', 'FBtr0333672'] 2021-10-25 09:35:37.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051213: ['FBtr0335241', 'FBtr0335242'] 2021-10-25 09:35:37.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034471: ['FBtr0086327', 'FBtr0340600'] 2021-10-25 09:35:37.064 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1031742, 1031802), (1031953, 1032888), (1031953, 1032906), (1033218, 1033271)] 2021-10-25 09:35:37.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.066 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19973148, 19973199), (19973659, 19973718), (19975483, 19975574), (19976876, 19977053), (19977263, 19977324), (19977616, 19977676), (19978312, 19978399), (19978465, 19978531), (19979026, 19979106)] 2021-10-25 09:35:37.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19712450, 19712509), (19712453, 19712509)] 2021-10-25 09:35:37.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.080 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19978531, 19979569, 'FBtr0335241_exon_9') contains intron (19979026, 19979106) 2021-10-25 09:35:37.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335241_exon_9'] 2021-10-25 09:35:37.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13668834, 13669016), (13668834, 13669535), (13669049, 13669535), (13669696, 13670644), (13670832, 13670906), (13671097, 13671163), (13671290, 13671368), (13671524, 13671974), (13672816, 13673097), (13672816, 13674145)] 2021-10-25 09:35:37.081 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034472: ['FBtr0086329'] 2021-10-25 09:35:37.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034472 has a single transcript. 2021-10-25 09:35:37.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051215: ['FBtr0083793'] 2021-10-25 09:35:37.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051215 has a single transcript. 2021-10-25 09:35:37.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030735: ['FBtr0112988', 'FBtr0112989', 'FBtr0112990', 'FBtr0112991', 'FBtr0343050', 'FBtr0344216'] 2021-10-25 09:35:37.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034473: ['FBtr0086344'] 2021-10-25 09:35:37.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034473 has a single transcript. 2021-10-25 09:35:37.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034474: ['FBtr0086342', 'FBtr0086343'] 2021-10-25 09:35:37.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051216: ['FBtr0083786', 'FBtr0335415'] 2021-10-25 09:35:37.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010220: ['FBtr0088564'] 2021-10-25 09:35:37.173 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010220 has a single transcript. 2021-10-25 09:35:37.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010222: ['FBtr0081996', 'FBtr0081997', 'FBtr0336761'] 2021-10-25 09:35:37.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19671743, 19687129), (19686984, 19687129), (19687297, 19688178), (19688365, 19696551), (19696656, 19697311), (19697446, 19697525), (19697966, 19698063)] 2021-10-25 09:35:37.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.212 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19783895, 19783963), (19783898, 19783963)] 2021-10-25 09:35:37.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263594: ['FBtr0078921'] 2021-10-25 09:35:37.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263594 has a single transcript. 2021-10-25 09:35:37.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263595: ['FBtr0309896'] 2021-10-25 09:35:37.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263595 has a single transcript. 2021-10-25 09:35:37.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263596: ['FBtr0309894'] 2021-10-25 09:35:37.235 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263596 has a single transcript. 2021-10-25 09:35:37.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263597: ['FBtr0310089'] 2021-10-25 09:35:37.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263597 has a single transcript. 2021-10-25 09:35:37.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038166: ['FBtr0082849'] 2021-10-25 09:35:37.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038166 has a single transcript. 2021-10-25 09:35:37.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9042784, 9042851), (9043639, 9049156), (9043639, 9048483), (9043639, 9050363)] 2021-10-25 09:35:37.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263598: ['FBtr0080418', 'FBtr0080419', 'FBtr0080420', 'FBtr0305551', 'FBtr0336613', 'FBtr0336614'] 2021-10-25 09:35:37.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051217: ['FBtr0083353'] 2021-10-25 09:35:37.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051217 has a single transcript. 2021-10-25 09:35:37.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038167: ['FBtr0082812', 'FBtr0082813', 'FBtr0082814', 'FBtr0082815', 'FBtr0082808', 'FBtr0082809', 'FBtr0082810', 'FBtr0082811', 'FBtr0301488'] 2021-10-25 09:35:37.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034475: ['FBtr0086335', 'FBtr0302932'] 2021-10-25 09:35:37.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051219: ['FBtr0113400'] 2021-10-25 09:35:37.272 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051219 has a single transcript. 2021-10-25 09:35:37.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16296790, 16297660), (16296883, 16297649), (16296883, 16297660), (16296907, 16297649), (16296907, 16297660), (16297239, 16297660), (16297784, 16297848), (16298840, 16299019), (16299210, 16299275), (16299471, 16299539), (16299725, 16299794), (16299959, 16300030), (16300157, 16300225), (16300331, 16300397), (16300708, 16300770), (16300875, 16300938), (16301524, 16301600), (16301751, 16301812), (16301917, 16302209), (16301917, 16302906), (16302412, 16302906)] 2021-10-25 09:35:37.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051220: ['FBtr0302358'] 2021-10-25 09:35:37.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051220 has a single transcript. 2021-10-25 09:35:37.282 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051221: ['FBtr0083762', 'FBtr0083763', 'FBtr0330030'] 2021-10-25 09:35:37.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19815630, 19815688)] 2021-10-25 09:35:37.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19412764, 19415632), (19412764, 19415637), (19416388, 19440702), (19440831, 19454066), (19454265, 19457119)] 2021-10-25 09:35:37.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010223: ['FBtr0075354'] 2021-10-25 09:35:37.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010223 has a single transcript. 2021-10-25 09:35:37.380 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083762': ['FBtr0330030']} 2021-10-25 09:35:37.380 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330030']] 2021-10-25 09:35:37.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034476: ['FBtr0086336'] 2021-10-25 09:35:37.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034476 has a single transcript. 2021-10-25 09:35:37.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010225: ['FBtr0078968', 'FBtr0078969', 'FBtr0078971', 'FBtr0078973', 'FBtr0309256', 'FBtr0309257', 'FBtr0336707'] 2021-10-25 09:35:37.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034477: ['FBtr0086341'] 2021-10-25 09:35:37.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034477 has a single transcript. 2021-10-25 09:35:37.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12974421, 12975613), (12974443, 12975613), (12974746, 12975613), (12975223, 12975613), (12975469, 12975613), (12975712, 12976125), (12976823, 12976931), (12977909, 12977976)] 2021-10-25 09:35:37.404 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034478: ['FBtr0086339'] 2021-10-25 09:35:37.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034478 has a single transcript. 2021-10-25 09:35:37.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034479: ['FBtr0086340', 'FBtr0305676', 'FBtr0305677', 'FBtr0342667'] 2021-10-25 09:35:37.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051223: ['FBtr0083965'] 2021-10-25 09:35:37.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051223 has a single transcript. 2021-10-25 09:35:37.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051224: ['FBtr0083691', 'FBtr0344326', 'FBtr0344327'] 2021-10-25 09:35:37.490 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13676932, 13677015), (13676944, 13677015), (13676944, 13677021), (13678212, 13678278), (13678473, 13678534), (13678692, 13678749), (13679066, 13679125), (13679066, 13679150), (13679066, 13679140)] 2021-10-25 09:35:37.492 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13678749, 13679430, 'FBtr0301488_exon_5') contains intron (13679066, 13679125) 2021-10-25 09:35:37.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301488_exon_5'] 2021-10-25 09:35:37.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.515 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19979309, 19980539), (19979309, 19982297), (19980821, 19980876), (19981275, 19982297), (19982204, 19982297), (19982703, 19982905), (19983049, 19983111)] 2021-10-25 09:35:37.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.519 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18651919, 18652059), (18653036, 18653104), (18653226, 18653290), (18655948, 18656164), (18657185, 18658759), (18657185, 18659253), (18657185, 18658525)] 2021-10-25 09:35:37.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4235324, 4236552), (4235324, 4236581), (4235324, 4237624), (4235324, 4236087), (4236148, 4236552), (4236281, 4236552), (4236804, 4237624), (4236939, 4237624), (4236939, 4236999), (4237210, 4237624), (4237817, 4238302), (4238377, 4238569), (4238765, 4238818), (4240524, 4240588), (4240714, 4240877)] 2021-10-25 09:35:37.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030737: ['FBtr0074240', 'FBtr0346059'] 2021-10-25 09:35:37.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16307547, 16307789), (16308168, 16308237)] 2021-10-25 09:35:37.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051225: ['FBtr0290293'] 2021-10-25 09:35:37.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051225 has a single transcript. 2021-10-25 09:35:37.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051226: ['FBtr0083675', 'FBtr0083676'] 2021-10-25 09:35:37.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263599: ['FBtr0075527'] 2021-10-25 09:35:37.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263599 has a single transcript. 2021-10-25 09:35:37.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030738: ['FBtr0112992', 'FBtr0336976'] 2021-10-25 09:35:37.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034480: ['FBtr0086325'] 2021-10-25 09:35:37.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034480 has a single transcript. 2021-10-25 09:35:37.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263600: ['FBtr0075522'] 2021-10-25 09:35:37.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263600 has a single transcript. 2021-10-25 09:35:37.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034481: ['FBtr0300692'] 2021-10-25 09:35:37.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034481 has a single transcript. 2021-10-25 09:35:37.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263601: ['FBtr0075520', 'FBtr0333578'] 2021-10-25 09:35:37.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034483: ['FBtr0086324'] 2021-10-25 09:35:37.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034483 has a single transcript. 2021-10-25 09:35:37.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18851376, 18851429), (18851666, 18851723), (18851666, 18851718)] 2021-10-25 09:35:37.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034484: ['FBtr0086313'] 2021-10-25 09:35:37.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034484 has a single transcript. 2021-10-25 09:35:37.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034485: ['FBtr0086315', 'FBtr0342673'] 2021-10-25 09:35:37.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16310307, 16310378), (16310786, 16310854), (16311218, 16311277), (16311431, 16311487), (16312882, 16312947)] 2021-10-25 09:35:37.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.706 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16006873, 16006932), (16008870, 16008929), (16010162, 16011279), (16010162, 16010240)] 2021-10-25 09:35:37.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051228: ['FBtr0083693'] 2021-10-25 09:35:37.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051228 has a single transcript. 2021-10-25 09:35:37.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20236968, 20237026), (20237209, 20237288), (20237436, 20237692), (20238004, 20238258)] 2021-10-25 09:35:37.748 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.748 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051229: ['FBtr0083663'] 2021-10-25 09:35:37.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051229 has a single transcript. 2021-10-25 09:35:37.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051230: ['FBtr0083666'] 2021-10-25 09:35:37.760 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051230 has a single transcript. 2021-10-25 09:35:37.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051231: ['FBtr0083662'] 2021-10-25 09:35:37.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051231 has a single transcript. 2021-10-25 09:35:37.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051233: ['FBtr0084127', 'FBtr0346732'] 2021-10-25 09:35:37.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030739: ['FBtr0336975'] 2021-10-25 09:35:37.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030739 has a single transcript. 2021-10-25 09:35:37.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030740: ['FBtr0074237', 'FBtr0331756'] 2021-10-25 09:35:37.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263602: ['FBtr0075498', 'FBtr0333600'] 2021-10-25 09:35:37.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034486: ['FBtr0086323'] 2021-10-25 09:35:37.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034486 has a single transcript. 2021-10-25 09:35:37.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21750684, 21750892), (21751370, 21751428), (21751667, 21751727)] 2021-10-25 09:35:37.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034487: ['FBtr0086316'] 2021-10-25 09:35:37.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034487 has a single transcript. 2021-10-25 09:35:37.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034488: ['FBtr0086322'] 2021-10-25 09:35:37.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034488 has a single transcript. 2021-10-25 09:35:37.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010226: ['FBtr0087006', 'FBtr0087005', 'FBtr0100258', 'FBtr0333551'] 2021-10-25 09:35:37.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16323116, 16323191)] 2021-10-25 09:35:37.835 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16321430, 16323231, 'FBtr0074237_exon_1') contains intron (16323116, 16323191) 2021-10-25 09:35:37.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074237_exon_1'] 2021-10-25 09:35:37.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034489: ['FBtr0086321'] 2021-10-25 09:35:37.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034489 has a single transcript. 2021-10-25 09:35:37.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16086280, 16086350), (16087336, 16087412)] 2021-10-25 09:35:37.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.839 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034490: ['FBtr0086320', 'FBtr0336635'] 2021-10-25 09:35:37.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051235: ['FBtr0083588', 'FBtr0346323'] 2021-10-25 09:35:37.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20248402, 20248467), (20248709, 20248773), (20249053, 20249113), (20249656, 20249746), (20249901, 20250207), (20250272, 20254555), (20250272, 20253885)] 2021-10-25 09:35:37.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030742: ['FBtr0074236', 'FBtr0340316'] 2021-10-25 09:35:37.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038168: ['FBtr0082848', 'FBtr0334530', 'FBtr0334531'] 2021-10-25 09:35:37.923 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18317482, 18317614), (18317761, 18325477), (18325541, 18326005), (18326658, 18328720)] 2021-10-25 09:35:37.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.924 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17094228, 17094315), (17094449, 17094516), (17094458, 17094528), (17094696, 17094764), (17095060, 17099491), (17095060, 17096803), (17095060, 17097227), (17097535, 17098125), (17098306, 17099491)] 2021-10-25 09:35:37.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.926 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263603: ['FBtr0075493', 'FBtr0075494', 'FBtr0333293', 'FBtr0333294', 'FBtr0310581', 'FBtr0310582'] 2021-10-25 09:35:37.944 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16329370, 16329514), (16329827, 16329894), (16329830, 16329894), (16330239, 16330707)] 2021-10-25 09:35:37.945 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034491: ['FBtr0086270', 'FBtr0086271', 'FBtr0086272'] 2021-10-25 09:35:37.969 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13680012, 13680071), (13680214, 13680278), (13680923, 13680982), (13681404, 13681464), (13681729, 13681786), (13682131, 13682186), (13682962, 13683026), (13683316, 13687171)] 2021-10-25 09:35:37.970 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:37.971 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:37.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051242: ['FBtr0083544'] 2021-10-25 09:35:37.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051242 has a single transcript. 2021-10-25 09:35:37.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051244: ['FBtr0083772'] 2021-10-25 09:35:37.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051244 has a single transcript. 2021-10-25 09:35:37.995 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051245: ['FBtr0083773'] 2021-10-25 09:35:37.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051245 has a single transcript. 2021-10-25 09:35:38.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051248: ['FBtr0081564', 'FBtr0334669'] 2021-10-25 09:35:38.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030743: ['FBtr0333302', 'FBtr0333303'] 2021-10-25 09:35:38.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20257752, 20258186), (20257955, 20258186), (20260559, 20260620), (20260746, 20260806)] 2021-10-25 09:35:38.024 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7129562, 7129624), (7129677, 7130173), (7130362, 7130416)] 2021-10-25 09:35:38.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16107529, 16107595), (16107786, 16108851), (16107786, 16109621), (16109054, 16109621), (16110122, 16110482), (16111881, 16111997), (16111881, 16112331), (16111914, 16111997), (16112098, 16112331)] 2021-10-25 09:35:38.066 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16107595, 16110122, 'FBtr0333293_exon_4') contains intron (16107786, 16108851) 2021-10-25 09:35:38.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16331725, 16331808), (16332122, 16333374)] 2021-10-25 09:35:38.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333293_exon_4'] 2021-10-25 09:35:38.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038170: ['FBtr0082819'] 2021-10-25 09:35:38.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038170 has a single transcript. 2021-10-25 09:35:38.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010228: ['FBtr0071673', 'FBtr0071674', 'FBtr0342960', 'FBtr0345488'] 2021-10-25 09:35:38.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038172: ['FBtr0082845'] 2021-10-25 09:35:38.093 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038172 has a single transcript. 2021-10-25 09:35:38.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038173: ['FBtr0082821'] 2021-10-25 09:35:38.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038173 has a single transcript. 2021-10-25 09:35:38.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038179: ['FBtr0082825'] 2021-10-25 09:35:38.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038179 has a single transcript. 2021-10-25 09:35:38.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051249: ['FBtr0083483'] 2021-10-25 09:35:38.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051249 has a single transcript. 2021-10-25 09:35:38.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038180: ['FBtr0082826'] 2021-10-25 09:35:38.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038180 has a single transcript. 2021-10-25 09:35:38.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051251: ['FBtr0083484'] 2021-10-25 09:35:38.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051251 has a single transcript. 2021-10-25 09:35:38.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051253: ['FBtr0085263'] 2021-10-25 09:35:38.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051253 has a single transcript. 2021-10-25 09:35:38.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034493: ['FBtr0339542'] 2021-10-25 09:35:38.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034493 has a single transcript. 2021-10-25 09:35:38.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038181: ['FBtr0082828', 'FBtr0082827', 'FBtr0333191', 'FBtr0333192', 'FBtr0333193'] 2021-10-25 09:35:38.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051259: ['FBtr0081871', 'FBtr0344341'] 2021-10-25 09:35:38.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030744: ['FBtr0074306', 'FBtr0074307', 'FBtr0074308', 'FBtr0074309', 'FBtr0074310'] 2021-10-25 09:35:38.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034494: ['FBtr0086305'] 2021-10-25 09:35:38.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034494 has a single transcript. 2021-10-25 09:35:38.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034495: ['FBtr0086277'] 2021-10-25 09:35:38.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034495 has a single transcript. 2021-10-25 09:35:38.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034496: ['FBtr0086304'] 2021-10-25 09:35:38.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034496 has a single transcript. 2021-10-25 09:35:38.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034497: ['FBtr0086303', 'FBtr0342679', 'FBtr0342680'] 2021-10-25 09:35:38.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8524573, 8524760), (8525537, 8525610)] 2021-10-25 09:35:38.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.182 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21698304, 21698387), (21698600, 21707624), (21698600, 21704322), (21698600, 21702676), (21698600, 21702672)] 2021-10-25 09:35:38.184 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20279334, 20279400), (20280165, 20280234), (20280445, 20280987), (20280445, 20280589), (20280445, 20280843)] 2021-10-25 09:35:38.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13771577, 13772171), (13771649, 13772171), (13771966, 13772171), (13772021, 13772171), (13772410, 13773934), (13774018, 13774311), (13774386, 13774452), (13774737, 13774798), (13774837, 13775091), (13775169, 13775227), (13775305, 13775381), (13775459, 13775529), (13776176, 13776234), (13776556, 13776791), (13776964, 13777252), (13777708, 13777909)] 2021-10-25 09:35:38.234 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13774311, 13774737, 'FBtr0082828_exon_4') contains intron (13774386, 13774452) 2021-10-25 09:35:38.235 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13774311, 13774737, 'FBtr0333191_exon_4') contains intron (13774386, 13774452) 2021-10-25 09:35:38.235 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13774311, 13774737, 'FBtr0333192_exon_4') contains intron (13774386, 13774452) 2021-10-25 09:35:38.235 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13774311, 13774737, 'FBtr0333193_exon_4') contains intron (13774386, 13774452) 2021-10-25 09:35:38.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082828_exon_4', 'FBtr0333191_exon_4', 'FBtr0333192_exon_4', 'FBtr0333193_exon_4'] 2021-10-25 09:35:38.235 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051262: ['FBtr0302852', 'FBtr0302853', 'FBtr0300053', 'FBtr0300361'] 2021-10-25 09:35:38.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16382557, 16382624), (16382843, 16382905), (16383167, 16384587), (16383167, 16383323), (16383511, 16384159), (16383511, 16384587), (16383525, 16384587)] 2021-10-25 09:35:38.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263605: ['FBtr0333565', 'FBtr0075484'] 2021-10-25 09:35:38.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034498: ['FBtr0086302'] 2021-10-25 09:35:38.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034498 has a single transcript. 2021-10-25 09:35:38.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010235: ['FBtr0075951', 'FBtr0331555', 'FBtr0331556'] 2021-10-25 09:35:38.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17217307, 17217360), (17218052, 17218108), (17218522, 17218576), (17218644, 17218702), (17218754, 17218810), (17218876, 17218930), (17219091, 17219147), (17219091, 17219160), (17219282, 17219337), (17219447, 17219773), (17219447, 17222788)] 2021-10-25 09:35:38.336 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17218810, 17219091, 'FBtr0300361_exon_4') contains intron (17218876, 17218930) 2021-10-25 09:35:38.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300361_exon_4'] 2021-10-25 09:35:38.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034499: ['FBtr0086301'] 2021-10-25 09:35:38.338 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034499 has a single transcript. 2021-10-25 09:35:38.347 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034500: ['FBtr0086299', 'FBtr0086300', 'FBtr0344185'] 2021-10-25 09:35:38.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16226358, 16226586), (16226358, 16226577), (16228420, 16228490)] 2021-10-25 09:35:38.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.395 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12746827, 12746897), (12746830, 12746897), (12747203, 12747274), (12747754, 12747820), (12747941, 12748055), (12748682, 12749709), (12748682, 12749962), (12748682, 12748806)] 2021-10-25 09:35:38.396 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263606: ['FBtr0112440'] 2021-10-25 09:35:38.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263606 has a single transcript. 2021-10-25 09:35:38.417 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20305028, 20305085), (20305467, 20306243), (20306351, 20306414), (20306636, 20308146), (20306636, 20308560), (20308499, 20308560)] 2021-10-25 09:35:38.418 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.418 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038183: ['FBtr0082830'] 2021-10-25 09:35:38.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038183 has a single transcript. 2021-10-25 09:35:38.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263607: ['FBtr0075459'] 2021-10-25 09:35:38.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263607 has a single transcript. 2021-10-25 09:35:38.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038186: ['FBtr0082881'] 2021-10-25 09:35:38.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038186 has a single transcript. 2021-10-25 09:35:38.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030745: ['FBtr0074268', 'FBtr0074269', 'FBtr0074270', 'FBtr0340314'] 2021-10-25 09:35:38.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263608: ['FBtr0075460'] 2021-10-25 09:35:38.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263608 has a single transcript. 2021-10-25 09:35:38.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038188: ['FBtr0082879'] 2021-10-25 09:35:38.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038188 has a single transcript. 2021-10-25 09:35:38.444 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263611: ['FBtr0309973', 'FBtr0309974'] 2021-10-25 09:35:38.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038189: ['FBtr0082878'] 2021-10-25 09:35:38.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038189 has a single transcript. 2021-10-25 09:35:38.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038190: ['FBtr0082877', 'FBtr0347152'] 2021-10-25 09:35:38.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051265: ['FBtr0083402'] 2021-10-25 09:35:38.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051265 has a single transcript. 2021-10-25 09:35:38.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010238: ['FBtr0087933'] 2021-10-25 09:35:38.493 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010238 has a single transcript. 2021-10-25 09:35:38.500 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19979043, 19979105)] 2021-10-25 09:35:38.500 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:38.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051266: ['FBtr0300060'] 2021-10-25 09:35:38.501 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051266 has a single transcript. 2021-10-25 09:35:38.501 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19978828, 19979723, 'FBtr0309974_exon_1') contains intron (19979043, 19979105) 2021-10-25 09:35:38.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309974_exon_1'] 2021-10-25 09:35:38.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.502 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010240: ['FBtr0074129'] 2021-10-25 09:35:38.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010240 has a single transcript. 2021-10-25 09:35:38.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051267: ['FBtr0083404'] 2021-10-25 09:35:38.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051267 has a single transcript. 2021-10-25 09:35:38.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010241: ['FBtr0087537'] 2021-10-25 09:35:38.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010241 has a single transcript. 2021-10-25 09:35:38.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051268: ['FBtr0083390', 'FBtr0307190'] 2021-10-25 09:35:38.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010246: ['FBtr0072672', 'FBtr0072673', 'FBtr0072674', 'FBtr0072675'] 2021-10-25 09:35:38.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16385338, 16386284), (16385687, 16386970), (16385691, 16386970), (16386350, 16386970), (16386618, 16386970), (16387289, 16387346), (16387619, 16387680)] 2021-10-25 09:35:38.530 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034501: ['FBtr0086298', 'FBtr0301209'] 2021-10-25 09:35:38.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038191: ['FBtr0082876'] 2021-10-25 09:35:38.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038191 has a single transcript. 2021-10-25 09:35:38.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263612: ['FBtr0309975', 'FBtr0309976'] 2021-10-25 09:35:38.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038194: ['FBtr0089766'] 2021-10-25 09:35:38.567 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038194 has a single transcript. 2021-10-25 09:35:38.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17031847, 17031908), (17032298, 17032363)] 2021-10-25 09:35:38.568 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17031908, 17033515, 'FBtr0307190_exon_2') contains intron (17032298, 17032363) 2021-10-25 09:35:38.569 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0307190_exon_2'] 2021-10-25 09:35:38.569 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038195: ['FBtr0082869'] 2021-10-25 09:35:38.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038195 has a single transcript. 2021-10-25 09:35:38.576 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20309746, 20309812), (20310183, 20310249), (20311247, 20311297), (20311509, 20313019), (20313861, 20316450)] 2021-10-25 09:35:38.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.577 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038196: ['FBtr0082870', 'FBtr0334297'] 2021-10-25 09:35:38.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9585016, 9585432), (9585016, 9585963), (9585810, 9585963)] 2021-10-25 09:35:38.609 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.618 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1318769, 1325994), (1321180, 1325994), (1324629, 1325994), (1325260, 1325994), (1326139, 1326200), (1326316, 1326372), (1326835, 1326897), (1329161, 1329223), (1329320, 1329400)] 2021-10-25 09:35:38.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14035278, 14035443), (14035551, 14035620), (14035682, 14035823)] 2021-10-25 09:35:38.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.625 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051269: ['FBtr0113401'] 2021-10-25 09:35:38.631 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051269 has a single transcript. 2021-10-25 09:35:38.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034502: ['FBtr0086282'] 2021-10-25 09:35:38.634 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034502 has a single transcript. 2021-10-25 09:35:38.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051272: ['FBtr0082312'] 2021-10-25 09:35:38.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051272 has a single transcript. 2021-10-25 09:35:38.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034503: ['FBtr0086297'] 2021-10-25 09:35:38.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034503 has a single transcript. 2021-10-25 09:35:38.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051274: ['FBtr0083369'] 2021-10-25 09:35:38.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051274 has a single transcript. 2021-10-25 09:35:38.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034504: ['FBtr0086284', 'FBtr0086285', 'FBtr0086283', 'FBtr0345355'] 2021-10-25 09:35:38.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051278: ['FBtr0082319', 'FBtr0344138'] 2021-10-25 09:35:38.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263613: ['FBtr0309977'] 2021-10-25 09:35:38.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263613 has a single transcript. 2021-10-25 09:35:38.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263615: ['FBtr0309979'] 2021-10-25 09:35:38.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263615 has a single transcript. 2021-10-25 09:35:38.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038197: ['FBtr0305052', 'FBtr0082886', 'FBtr0082887', 'FBtr0337094', 'FBtr0346723'] 2021-10-25 09:35:38.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030746: ['FBtr0074304', 'FBtr0334043', 'FBtr0334044'] 2021-10-25 09:35:38.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263616: ['FBtr0309981'] 2021-10-25 09:35:38.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263616 has a single transcript. 2021-10-25 09:35:38.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263617: ['FBtr0309982', 'FBtr0344727', 'FBtr0347118'] 2021-10-25 09:35:38.706 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10707786, 10707857), (10707786, 10707846)] 2021-10-25 09:35:38.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.750 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20327393, 20328326), (20327393, 20327866), (20328134, 20328326), (20329021, 20329105), (20329197, 20329263), (20329630, 20329708), (20330164, 20330224)] 2021-10-25 09:35:38.751 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20327269, 20328134, 'FBtr0086285_exon_1') contains intron (20327393, 20327866) 2021-10-25 09:35:38.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086285_exon_1'] 2021-10-25 09:35:38.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16400385, 16400454), (16401247, 16401302), (16401894, 16401960), (16402375, 16402453), (16403021, 16403092), (16403218, 16403279), (16403563, 16404496), (16404688, 16404759), (16404715, 16404788)] 2021-10-25 09:35:38.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:38.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051279: ['FBtr0301433', 'FBtr0301434', 'FBtr0310428', 'FBtr0310429', 'FBtr0337013', 'FBtr0337014'] 2021-10-25 09:35:38.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010247: ['FBtr0113885'] 2021-10-25 09:35:38.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010247 has a single transcript. 2021-10-25 09:35:38.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010258: ['FBtr0082853'] 2021-10-25 09:35:38.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010258 has a single transcript. 2021-10-25 09:35:38.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14057024, 14057740), (14057024, 14057873), (14057428, 14057886), (14058107, 14066540), (14066862, 14066937), (14067152, 14079345), (14079638, 14080238), (14080463, 14080692), (14080463, 14080710), (14080915, 14081003), (14081187, 14081333), (14081187, 14081306), (14081431, 14081496), (14082185, 14086975)] 2021-10-25 09:35:38.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010263: ['FBtr0077639', 'FBtr0077638', 'FBtr0077637', 'FBtr0077640', 'FBtr0100468', 'FBtr0330213', 'FBtr0290237', 'FBtr0290238', 'FBtr0343782'] 2021-10-25 09:35:38.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030747: ['FBtr0074272', 'FBtr0308604', 'FBtr0308605'] 2021-10-25 09:35:38.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263618: ['FBtr0309983', 'FBtr0309984'] 2021-10-25 09:35:38.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034505: ['FBtr0086286'] 2021-10-25 09:35:38.904 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034505 has a single transcript. 2021-10-25 09:35:38.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16430742, 16430796), (16430941, 16430997), (16431191, 16431281), (16431707, 16432117), (16431707, 16432114), (16432540, 16432622), (16432540, 16432598), (16432570, 16432622), (16432570, 16432653)] 2021-10-25 09:35:38.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034506: ['FBtr0086287', 'FBtr0086288'] 2021-10-25 09:35:38.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4929875, 4930919), (4930692, 4930919)] 2021-10-25 09:35:38.914 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.914 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16405732, 16409782), (16407089, 16409782), (16409209, 16409782), (16409990, 16410071), (16410197, 16410317), (16410864, 16410941), (16411356, 16411422), (16412171, 16412235), (16412732, 16412815), (16413629, 16413693), (16414020, 16414086)] 2021-10-25 09:35:38.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16410941, 16412171, 'FBtr0308604_exon_5') contains intron (16411356, 16411422) 2021-10-25 09:35:38.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16410941, 16412171, 'FBtr0308605_exon_5') contains intron (16411356, 16411422) 2021-10-25 09:35:38.924 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308604_exon_5', 'FBtr0308605_exon_5'] 2021-10-25 09:35:38.924 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20343997, 20344055), (20344112, 20344195), (20344142, 20344195), (20344537, 20344649)] 2021-10-25 09:35:38.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:38.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:38.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263619: ['FBtr0309985', 'FBtr0344302'] 2021-10-25 09:35:39.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038198: ['FBtr0082888', 'FBtr0082889'] 2021-10-25 09:35:39.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034507: ['FBtr0290122'] 2021-10-25 09:35:39.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034507 has a single transcript. 2021-10-25 09:35:39.020 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5607857, 5607958), (5607886, 5607958), (5608181, 5608252), (5608181, 5608257)] 2021-10-25 09:35:39.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034509: ['FBtr0086292'] 2021-10-25 09:35:39.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034509 has a single transcript. 2021-10-25 09:35:39.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030748: ['FBtr0074273', 'FBtr0074274', 'FBtr0074275', 'FBtr0334036', 'FBtr0334037', 'FBtr0308606', 'FBtr0308607'] 2021-10-25 09:35:39.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2955313, 2955379), (2955507, 2961217), (2957264, 2960689), (2959520, 2960689), (2959520, 2961217), (2960835, 2960894), (2960839, 2960894), (2960986, 2961214), (2960986, 2961217), (2960986, 2961220), (2960991, 2961217), (2961672, 2961738), (2961996, 2962271), (2961996, 2962585), (2962286, 2962585), (2962865, 2962954), (2963132, 2963224)] 2021-10-25 09:35:39.034 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034510: ['FBtr0086295'] 2021-10-25 09:35:39.034 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.034 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034510 has a single transcript. 2021-10-25 09:35:39.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.041 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034511: ['FBtr0086214'] 2021-10-25 09:35:39.042 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034511 has a single transcript. 2021-10-25 09:35:39.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14089599, 14091297), (14090879, 14091297), (14091401, 14091808)] 2021-10-25 09:35:39.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034512: ['FBtr0086216', 'FBtr0345933'] 2021-10-25 09:35:39.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263620: ['FBtr0345149', 'FBtr0309986', 'FBtr0345148'] 2021-10-25 09:35:39.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20534592, 20534653)] 2021-10-25 09:35:39.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038199: ['FBtr0113232'] 2021-10-25 09:35:39.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038199 has a single transcript. 2021-10-25 09:35:39.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038200: ['FBtr0082917'] 2021-10-25 09:35:39.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038200 has a single transcript. 2021-10-25 09:35:39.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038201: ['FBtr0100131', 'FBtr0305681'] 2021-10-25 09:35:39.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051281: ['FBtr0084339', 'FBtr0310110'] 2021-10-25 09:35:39.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034513: ['FBtr0086217'] 2021-10-25 09:35:39.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034513 has a single transcript. 2021-10-25 09:35:39.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034514: ['FBtr0086268'] 2021-10-25 09:35:39.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034514 has a single transcript. 2021-10-25 09:35:39.157 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4452816, 4452878), (4453549, 4453936), (4453767, 4453936)] 2021-10-25 09:35:39.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034515: ['FBtr0086267', 'FBtr0308649'] 2021-10-25 09:35:39.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14100708, 14100797), (14100950, 14101112), (14101330, 14101858)] 2021-10-25 09:35:39.166 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.166 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22966560, 22966631), (22966560, 22966628)] 2021-10-25 09:35:39.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.179 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16415129, 16415608), (16415129, 16415656), (16415178, 16415656), (16415527, 16415608), (16415527, 16415656), (16415585, 16415656), (16416085, 16416154), (16416563, 16416618), (16416734, 16416794)] 2021-10-25 09:35:39.180 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16415045, 16416085, 'FBtr0074273_exon_1') contains intron (16415129, 16415608) 2021-10-25 09:35:39.181 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074273_exon_1'] 2021-10-25 09:35:39.181 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20539676, 20539744), (20539813, 20540220), (20539813, 20539964), (20540039, 20540220), (20540250, 20540305)] 2021-10-25 09:35:39.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038202: ['FBtr0082914', 'FBtr0330081', 'FBtr0346767'] 2021-10-25 09:35:39.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051282: ['FBtr0083285'] 2021-10-25 09:35:39.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051282 has a single transcript. 2021-10-25 09:35:39.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051286: ['FBtr0081682'] 2021-10-25 09:35:39.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051286 has a single transcript. 2021-10-25 09:35:39.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051287: ['FBtr0083256', 'FBtr0345259'] 2021-10-25 09:35:39.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263621: ['FBtr0309980'] 2021-10-25 09:35:39.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263621 has a single transcript. 2021-10-25 09:35:39.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034517: ['FBtr0086263', 'FBtr0299803'] 2021-10-25 09:35:39.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263622: ['FBtr0309990'] 2021-10-25 09:35:39.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263622 has a single transcript. 2021-10-25 09:35:39.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263623: ['FBtr0309989'] 2021-10-25 09:35:39.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263623 has a single transcript. 2021-10-25 09:35:39.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263624: ['FBtr0309988'] 2021-10-25 09:35:39.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263624 has a single transcript. 2021-10-25 09:35:39.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263625: ['FBtr0309987'] 2021-10-25 09:35:39.296 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263625 has a single transcript. 2021-10-25 09:35:39.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16203593, 16203647), (16203950, 16204007), (16204688, 16204743)] 2021-10-25 09:35:39.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.296 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14106078, 14106141), (14107433, 14107728)] 2021-10-25 09:35:39.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263626: ['FBtr0309991'] 2021-10-25 09:35:39.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263626 has a single transcript. 2021-10-25 09:35:39.308 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0082914': ['FBtr0330081', 'FBtr0346767']} 2021-10-25 09:35:39.309 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330081', 'FBtr0346767']] 2021-10-25 09:35:39.311 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263627: ['FBtr0309993'] 2021-10-25 09:35:39.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263627 has a single transcript. 2021-10-25 09:35:39.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20548960, 20549026), (20549125, 20549187), (20549561, 20549631), (20549988, 20550052)] 2021-10-25 09:35:39.313 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038203: ['FBtr0082890'] 2021-10-25 09:35:39.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038203 has a single transcript. 2021-10-25 09:35:39.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263628: ['FBtr0309994'] 2021-10-25 09:35:39.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263628 has a single transcript. 2021-10-25 09:35:39.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038204: ['FBtr0301280'] 2021-10-25 09:35:39.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038204 has a single transcript. 2021-10-25 09:35:39.327 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263647: ['FBtr0310008'] 2021-10-25 09:35:39.327 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263647 has a single transcript. 2021-10-25 09:35:39.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038205: ['FBtr0082912'] 2021-10-25 09:35:39.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038205 has a single transcript. 2021-10-25 09:35:39.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263648: ['FBtr0310011', 'FBtr0310012'] 2021-10-25 09:35:39.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038206: ['FBtr0082891'] 2021-10-25 09:35:39.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038206 has a single transcript. 2021-10-25 09:35:39.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038207: ['FBtr0082908'] 2021-10-25 09:35:39.351 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038207 has a single transcript. 2021-10-25 09:35:39.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051288: ['FBtr0084860'] 2021-10-25 09:35:39.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051288 has a single transcript. 2021-10-25 09:35:39.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038208: ['FBtr0082907'] 2021-10-25 09:35:39.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038208 has a single transcript. 2021-10-25 09:35:39.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051292: ['FBtr0304144', 'FBtr0345275'] 2021-10-25 09:35:39.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038209: ['FBtr0082906'] 2021-10-25 09:35:39.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038209 has a single transcript. 2021-10-25 09:35:39.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038210: ['FBtr0082894'] 2021-10-25 09:35:39.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038210 has a single transcript. 2021-10-25 09:35:39.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034518: ['FBtr0100495', 'FBtr0100496'] 2021-10-25 09:35:39.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038211: ['FBtr0082902'] 2021-10-25 09:35:39.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038211 has a single transcript. 2021-10-25 09:35:39.389 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14291234, 14291300)] 2021-10-25 09:35:39.390 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14291200, 14291817, 'FBtr0310012_exon_1') contains intron (14291234, 14291300) 2021-10-25 09:35:39.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310012_exon_1'] 2021-10-25 09:35:39.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038213: ['FBtr0082897'] 2021-10-25 09:35:39.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038213 has a single transcript. 2021-10-25 09:35:39.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038214: ['FBtr0300059'] 2021-10-25 09:35:39.407 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038214 has a single transcript. 2021-10-25 09:35:39.413 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15906342, 15906410), (15906527, 15906586)] 2021-10-25 09:35:39.414 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15906239, 15906527, 'FBtr0304144_exon_1') contains intron (15906342, 15906410) 2021-10-25 09:35:39.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0304144_exon_1'] 2021-10-25 09:35:39.415 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038217: ['FBtr0082952'] 2021-10-25 09:35:39.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038217 has a single transcript. 2021-10-25 09:35:39.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010265: ['FBtr0079724', 'FBtr0100541', 'FBtr0346454'] 2021-10-25 09:35:39.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038218: ['FBtr0082951'] 2021-10-25 09:35:39.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038218 has a single transcript. 2021-10-25 09:35:39.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20551722, 20551781), (20551825, 20551892)] 2021-10-25 09:35:39.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038219: ['FBtr0082920'] 2021-10-25 09:35:39.434 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038219 has a single transcript. 2021-10-25 09:35:39.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038221: ['FBtr0082924'] 2021-10-25 09:35:39.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038221 has a single transcript. 2021-10-25 09:35:39.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038223: ['FBtr0310000', 'FBtr0310001', 'FBtr0273391'] 2021-10-25 09:35:39.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263649: ['FBtr0310013'] 2021-10-25 09:35:39.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263649 has a single transcript. 2021-10-25 09:35:39.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263650: ['FBtr0310042'] 2021-10-25 09:35:39.463 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263650 has a single transcript. 2021-10-25 09:35:39.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263651: ['FBtr0310043'] 2021-10-25 09:35:39.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263651 has a single transcript. 2021-10-25 09:35:39.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051294: ['FBtr0083198'] 2021-10-25 09:35:39.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051294 has a single transcript. 2021-10-25 09:35:39.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030749: ['FBtr0074302', 'FBtr0074303', 'FBtr0334038', 'FBtr0334039', 'FBtr0334040', 'FBtr0334041', 'FBtr0334042'] 2021-10-25 09:35:39.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263652: ['FBtr0310085'] 2021-10-25 09:35:39.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263652 has a single transcript. 2021-10-25 09:35:39.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034519: ['FBtr0100677'] 2021-10-25 09:35:39.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034519 has a single transcript. 2021-10-25 09:35:39.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051296: ['FBtr0083155', 'FBtr0334558'] 2021-10-25 09:35:39.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263653: ['FBtr0310084'] 2021-10-25 09:35:39.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263653 has a single transcript. 2021-10-25 09:35:39.491 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8364125, 8364187), (8364315, 8364540)] 2021-10-25 09:35:39.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034520: ['FBtr0342701', 'FBtr0342702'] 2021-10-25 09:35:39.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263654: ['FBtr0445727'] 2021-10-25 09:35:39.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263654 has a single transcript. 2021-10-25 09:35:39.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263655: ['FBtr0310091'] 2021-10-25 09:35:39.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263655 has a single transcript. 2021-10-25 09:35:39.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263656: ['FBtr0310092'] 2021-10-25 09:35:39.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263656 has a single transcript. 2021-10-25 09:35:39.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263657: ['FBtr0343219'] 2021-10-25 09:35:39.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263657 has a single transcript. 2021-10-25 09:35:39.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14323287, 14324559), (14324698, 14324756), (14326078, 14326136)] 2021-10-25 09:35:39.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263658: ['FBtr0310101'] 2021-10-25 09:35:39.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263658 has a single transcript. 2021-10-25 09:35:39.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263659: ['FBtr0310102', 'FBtr0310103'] 2021-10-25 09:35:39.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15530832, 15530891), (15531292, 15531347)] 2021-10-25 09:35:39.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20557195, 20558086), (20558235, 20558391)] 2021-10-25 09:35:39.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:39.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051300: ['FBtr0084824'] 2021-10-25 09:35:39.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051300 has a single transcript. 2021-10-25 09:35:39.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034521: ['FBtr0086259'] 2021-10-25 09:35:39.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034521 has a single transcript. 2021-10-25 09:35:39.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010269: ['FBtr0071313', 'FBtr0340120'] 2021-10-25 09:35:39.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051301: ['FBtr0083087'] 2021-10-25 09:35:39.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051301 has a single transcript. 2021-10-25 09:35:39.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034523: ['FBtr0086257'] 2021-10-25 09:35:39.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034523 has a single transcript. 2021-10-25 09:35:39.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051313: ['FBtr0082982', 'FBtr0334960', 'FBtr0334961'] 2021-10-25 09:35:39.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034527: ['FBtr0086225', 'FBtr0086226'] 2021-10-25 09:35:39.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038224: ['FBtr0082931', 'FBtr0082932', 'FBtr0303795'] 2021-10-25 09:35:39.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16417895, 16417955), (16418024, 16418080), (16418290, 16418359), (16418589, 16418667), (16419049, 16419203), (16419049, 16422166), (16419049, 16420049), (16419770, 16420049), (16420118, 16422166), (16420118, 16421780), (16420118, 16422243), (16420118, 16420372)] 2021-10-25 09:35:39.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263660: ['FBtr0310104', 'FBtr0310105'] 2021-10-25 09:35:39.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9247908, 9248541), (9247908, 9248550), (9249181, 9249374), (9249701, 9249772)] 2021-10-25 09:35:39.665 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.665 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20618888, 20618955), (20619220, 20619280), (20619427, 20619479), (20620019, 20620079), (20620235, 20620437), (20620544, 20620607), (20620750, 20620816)] 2021-10-25 09:35:39.669 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20620607, 20621081, 'FBtr0086225_exon_7') contains intron (20620750, 20620816) 2021-10-25 09:35:39.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086225_exon_7'] 2021-10-25 09:35:39.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14567006, 14567164), (14567006, 14567153), (14567280, 14567338)] 2021-10-25 09:35:39.695 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.706 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:39.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.708 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14327127, 14327252), (14327183, 14327252)] 2021-10-25 09:35:39.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010278: ['FBtr0072242'] 2021-10-25 09:35:39.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.722 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010278 has a single transcript. 2021-10-25 09:35:39.722 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034528: ['FBtr0086254', 'FBtr0342722'] 2021-10-25 09:35:39.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010280: ['FBtr0075448', 'FBtr0075449', 'FBtr0075450', 'FBtr0075451', 'FBtr0114589', 'FBtr0301911', 'FBtr0333290', 'FBtr0333291', 'FBtr0345951'] 2021-10-25 09:35:39.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263661: ['FBtr0310106'] 2021-10-25 09:35:39.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263661 has a single transcript. 2021-10-25 09:35:39.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263662: ['FBtr0310107'] 2021-10-25 09:35:39.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263662 has a single transcript. 2021-10-25 09:35:39.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20621317, 20621459), (20623174, 20623230)] 2021-10-25 09:35:39.781 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20620913, 20623174, 'FBtr0086254_exon_2') contains intron (20621317, 20621459) 2021-10-25 09:35:39.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086254_exon_2'] 2021-10-25 09:35:39.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263663: ['FBtr0310108', 'FBtr0310109'] 2021-10-25 09:35:39.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051320: ['FBtr0082943'] 2021-10-25 09:35:39.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051320 has a single transcript. 2021-10-25 09:35:39.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051321: ['FBtr0082926'] 2021-10-25 09:35:39.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051321 has a single transcript. 2021-10-25 09:35:39.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051323: ['FBtr0084988', 'FBtr0307339'] 2021-10-25 09:35:39.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038225: ['FBtr0082940'] 2021-10-25 09:35:39.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038225 has a single transcript. 2021-10-25 09:35:39.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22780835, 22781289)] 2021-10-25 09:35:39.833 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.833 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034529: ['FBtr0086227'] 2021-10-25 09:35:39.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034529 has a single transcript. 2021-10-25 09:35:39.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038233: ['FBtr0082987', 'FBtr0330045'] 2021-10-25 09:35:39.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034530: ['FBtr0086253', 'FBtr0300698'] 2021-10-25 09:35:39.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26171038, 26183799), (26171455, 26183799), (26183964, 26184044), (26184221, 26184289), (26184404, 26184467)] 2021-10-25 09:35:39.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.887 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14510151, 14510235), (14510750, 14510818)] 2021-10-25 09:35:39.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20629932, 20630025), (20630265, 20630683), (20631114, 20633350), (20631114, 20632789)] 2021-10-25 09:35:39.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263664: ['FBtr0310111'] 2021-10-25 09:35:39.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263664 has a single transcript. 2021-10-25 09:35:39.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263665: ['FBtr0310112', 'FBtr0310113'] 2021-10-25 09:35:39.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030752: ['FBtr0074301', 'FBtr0343350'] 2021-10-25 09:35:39.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051324: ['FBtr0084985', 'FBtr0333925', 'FBtr0333926'] 2021-10-25 09:35:39.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16113365, 16113884), (16113365, 16114311), (16113365, 16113895), (16114141, 16114311), (16114720, 16115668), (16114843, 16115668), (16115830, 16116031), (16115830, 16117544), (16116241, 16117544), (16116619, 16117544), (16118108, 16118171), (16118399, 16118506), (16119400, 16119457), (16119631, 16119691), (16119817, 16119913)] 2021-10-25 09:35:39.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.930 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038234: ['FBtr0082953'] 2021-10-25 09:35:39.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038234 has a single transcript. 2021-10-25 09:35:39.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034532: ['FBtr0086229'] 2021-10-25 09:35:39.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034532 has a single transcript. 2021-10-25 09:35:39.952 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038235: ['FBtr0082986'] 2021-10-25 09:35:39.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038235 has a single transcript. 2021-10-25 09:35:39.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034534: ['FBtr0086230', 'FBtr0342716'] 2021-10-25 09:35:39.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22871144, 22871201), (22871277, 22871648), (22871933, 22872017)] 2021-10-25 09:35:39.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038236: ['FBtr0082954'] 2021-10-25 09:35:39.959 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038236 has a single transcript. 2021-10-25 09:35:39.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16439286, 16439423), (16439286, 16439596), (16439514, 16439596), (16439762, 16439826), (16440162, 16440216), (16440412, 16440656), (16440925, 16441141)] 2021-10-25 09:35:39.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:39.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038237: ['FBtr0300330', 'FBtr0330048', 'FBtr0345168'] 2021-10-25 09:35:39.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(26107342, 26124434), (26107342, 26107584), (26108877, 26117449), (26117643, 26124434), (26124657, 26129003), (26128872, 26129003)] 2021-10-25 09:35:39.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:39.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20641118, 20641180), (20641118, 20641165)] 2021-10-25 09:35:40.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263667: ['FBtr0072134', 'FBtr0343298'] 2021-10-25 09:35:40.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030753: ['FBtr0074278', 'FBtr0343349'] 2021-10-25 09:35:40.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14516252, 14516309), (14516469, 14516605), (14516759, 14517554), (14517878, 14517944), (14518036, 14518092), (14518336, 14518405), (14518693, 14518769), (14518850, 14523153), (14523419, 14523476), (14523722, 14525208), (14525473, 14529176), (14530230, 14554374), (14554410, 14557511), (14554410, 14555918)] 2021-10-25 09:35:40.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034535: ['FBtr0086231'] 2021-10-25 09:35:40.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034535 has a single transcript. 2021-10-25 09:35:40.079 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23899264, 23899323), (23899446, 23899510), (23899680, 23899743), (23899934, 23899991), (23901955, 23902019), (23901955, 23902031), (23902164, 23902231), (23902530, 23902591), (23902900, 23902958)] 2021-10-25 09:35:40.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034537: ['FBtr0086232'] 2021-10-25 09:35:40.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034537 has a single transcript. 2021-10-25 09:35:40.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16442020, 16443492), (16443976, 16444040), (16444326, 16444389)] 2021-10-25 09:35:40.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051326: ['FBtr0082901'] 2021-10-25 09:35:40.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051326 has a single transcript. 2021-10-25 09:35:40.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034538: ['FBtr0086249', 'FBtr0342721'] 2021-10-25 09:35:40.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051327: ['FBtr0082904'] 2021-10-25 09:35:40.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051327 has a single transcript. 2021-10-25 09:35:40.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051331: ['FBtr0082836'] 2021-10-25 09:35:40.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051331 has a single transcript. 2021-10-25 09:35:40.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051333: ['FBtr0083977'] 2021-10-25 09:35:40.113 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051333 has a single transcript. 2021-10-25 09:35:40.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051334: ['FBtr0083976'] 2021-10-25 09:35:40.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051334 has a single transcript. 2021-10-25 09:35:40.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051337: ['FBtr0082790'] 2021-10-25 09:35:40.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051337 has a single transcript. 2021-10-25 09:35:40.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051342: ['FBtr0113403', 'FBtr0113404'] 2021-10-25 09:35:40.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20653405, 20653539), (20653692, 20653744), (20653903, 20654969)] 2021-10-25 09:35:40.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263697: ['FBtr0087585'] 2021-10-25 09:35:40.148 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263697 has a single transcript. 2021-10-25 09:35:40.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038238: ['FBtr0113233'] 2021-10-25 09:35:40.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038238 has a single transcript. 2021-10-25 09:35:40.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030756: ['FBtr0074297'] 2021-10-25 09:35:40.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030756 has a single transcript. 2021-10-25 09:35:40.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263705: ['FBtr0310332', 'FBtr0310333', 'FBtr0310334', 'FBtr0346278'] 2021-10-25 09:35:40.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038239: ['FBtr0082955'] 2021-10-25 09:35:40.164 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038239 has a single transcript. 2021-10-25 09:35:40.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030757: ['FBtr0074296', 'FBtr0334035'] 2021-10-25 09:35:40.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038240: ['FBtr0082956'] 2021-10-25 09:35:40.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038240 has a single transcript. 2021-10-25 09:35:40.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038241: ['FBtr0082983'] 2021-10-25 09:35:40.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038241 has a single transcript. 2021-10-25 09:35:40.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12986430, 12986488), (12986709, 12986787), (12987356, 12987432), (12987484, 12988605), (12990024, 12990135), (12990277, 12990340), (12990499, 12990552)] 2021-10-25 09:35:40.182 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12988605, 12990277, 'FBtr0113404_exon_5') contains intron (12990024, 12990135) 2021-10-25 09:35:40.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113404_exon_5'] 2021-10-25 09:35:40.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038242: ['FBtr0082957'] 2021-10-25 09:35:40.186 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038242 has a single transcript. 2021-10-25 09:35:40.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038243: ['FBtr0082981', 'FBtr0334959'] 2021-10-25 09:35:40.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034539: ['FBtr0086248'] 2021-10-25 09:35:40.207 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034539 has a single transcript. 2021-10-25 09:35:40.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034540: ['FBtr0302284', 'FBtr0342717'] 2021-10-25 09:35:40.217 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16544923, 16545010), (16545824, 16545885), (16546479, 16546546), (16546797, 16546853), (16547280, 16547347)] 2021-10-25 09:35:40.218 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.219 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14568599, 14568663)] 2021-10-25 09:35:40.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051343: ['FBtr0084126'] 2021-10-25 09:35:40.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051343 has a single transcript. 2021-10-25 09:35:40.253 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10931371, 10938452), (10938761, 10941340), (10938761, 10941722), (10941613, 10941722), (10948637, 10960601), (10956672, 10960601), (10961182, 10961270), (10961502, 10962092), (10963235, 10963299)] 2021-10-25 09:35:40.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051344: ['FBtr0083136'] 2021-10-25 09:35:40.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051344 has a single transcript. 2021-10-25 09:35:40.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051345: ['FBtr0082689'] 2021-10-25 09:35:40.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051345 has a single transcript. 2021-10-25 09:35:40.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20647046, 20657229), (20657635, 20658315), (20659503, 20659568), (20659715, 20659780), (20659866, 20659924)] 2021-10-25 09:35:40.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051347: ['FBtr0082664'] 2021-10-25 09:35:40.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051347 has a single transcript. 2021-10-25 09:35:40.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030759: ['FBtr0074282'] 2021-10-25 09:35:40.278 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030759 has a single transcript. 2021-10-25 09:35:40.283 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0302284': ['FBtr0342717']} 2021-10-25 09:35:40.283 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0342717']] 2021-10-25 09:35:40.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030761: ['FBtr0074289', 'FBtr0330409', 'FBtr0310319'] 2021-10-25 09:35:40.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051352: ['FBtr0082092', 'FBtr0339597', 'FBtr0300564', 'FBtr0300565', 'FBtr0344275', 'FBtr0344276', 'FBtr0344277', 'FBtr0346714'] 2021-10-25 09:35:40.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034541: ['FBtr0086235'] 2021-10-25 09:35:40.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034541 has a single transcript. 2021-10-25 09:35:40.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034542: ['FBtr0086245', 'FBtr0086246'] 2021-10-25 09:35:40.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038244: ['FBtr0082978', 'FBtr0082979'] 2021-10-25 09:35:40.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010282: ['FBtr0081719'] 2021-10-25 09:35:40.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010282 has a single transcript. 2021-10-25 09:35:40.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010287: ['FBtr0079542'] 2021-10-25 09:35:40.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010287 has a single transcript. 2021-10-25 09:35:40.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010288: ['FBtr0077844', 'FBtr0303459', 'FBtr0330676'] 2021-10-25 09:35:40.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20663095, 20663159), (20663386, 20663452), (20663868, 20663934), (20664677, 20664785), (20665068, 20665363), (20665068, 20666918), (20665463, 20665544)] 2021-10-25 09:35:40.352 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16598429, 16599152)] 2021-10-25 09:35:40.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14572361, 14572422), (14573137, 14573209), (14573634, 14573725), (14574482, 14574547), (14574885, 14575770), (14575059, 14575770)] 2021-10-25 09:35:40.360 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.360 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038246: ['FBtr0082960', 'FBtr0082961', 'FBtr0334028'] 2021-10-25 09:35:40.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034543: ['FBtr0086236', 'FBtr0342718', 'FBtr0345353', 'FBtr0345354'] 2021-10-25 09:35:40.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263706: ['FBtr0310335', 'FBtr0310336', 'FBtr0310337', 'FBtr0310338', 'FBtr0310339', 'FBtr0342802', 'FBtr0342803', 'FBtr0330597'] 2021-10-25 09:35:40.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2213333, 2213414), (2213548, 2213615), (2213557, 2213615), (2213756, 2213895)] 2021-10-25 09:35:40.426 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030763: ['FBtr0074288'] 2021-10-25 09:35:40.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030763 has a single transcript. 2021-10-25 09:35:40.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030764: ['FBtr0074287'] 2021-10-25 09:35:40.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030764 has a single transcript. 2021-10-25 09:35:40.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030766: ['FBtr0074314', 'FBtr0340150'] 2021-10-25 09:35:40.473 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9695223, 9695281), (9695523, 9695586), (9695637, 9696599), (9695653, 9695821), (9695653, 9696421), (9695928, 9696599), (9696507, 9696599), (9696739, 9696965), (9697139, 9697207), (9697761, 9697907), (9697761, 9698317), (9697964, 9698317), (9698989, 9699050), (9699361, 9699510), (9699361, 9699525), (9699361, 9704944)] 2021-10-25 09:35:40.475 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9699050, 9699920, 'FBtr0344276_exon_1') contains intron (9699361, 9699510) 2021-10-25 09:35:40.475 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344276_exon_1'] 2021-10-25 09:35:40.475 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14609867, 14609967), (14610107, 14615728), (14614040, 14615728), (14615797, 14615856), (14616183, 14616951), (14617009, 14617174), (14617246, 14617303), (14617834, 14617893)] 2021-10-25 09:35:40.487 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14609641, 14610107, 'FBtr0082960_exon_1') contains intron (14609867, 14609967) 2021-10-25 09:35:40.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082960_exon_1'] 2021-10-25 09:35:40.488 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.507 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16643509, 16647768)] 2021-10-25 09:35:40.508 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.508 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010292: ['FBtr0071090'] 2021-10-25 09:35:40.520 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010292 has a single transcript. 2021-10-25 09:35:40.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20670938, 20670987), (20671678, 20671745), (20671858, 20672118), (20672269, 20672339)] 2021-10-25 09:35:40.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010294: ['FBtr0070540'] 2021-10-25 09:35:40.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010294 has a single transcript. 2021-10-25 09:35:40.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010295: ['FBtr0070539'] 2021-10-25 09:35:40.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010295 has a single transcript. 2021-10-25 09:35:40.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010296: ['FBtr0070538'] 2021-10-25 09:35:40.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010296 has a single transcript. 2021-10-25 09:35:40.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010300: ['FBtr0081158', 'FBtr0081159', 'FBtr0081160', 'FBtr0344846', 'FBtr0336627'] 2021-10-25 09:35:40.560 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030768: ['FBtr0074376'] 2021-10-25 09:35:40.561 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030768 has a single transcript. 2021-10-25 09:35:40.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030769: ['FBtr0290216', 'FBtr0335279', 'FBtr0335280', 'FBtr0335281'] 2021-10-25 09:35:40.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038247: ['FBtr0344279'] 2021-10-25 09:35:40.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038247 has a single transcript. 2021-10-25 09:35:40.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038248: ['FBtr0082976'] 2021-10-25 09:35:40.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038248 has a single transcript. 2021-10-25 09:35:40.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038250: ['FBtr0082966'] 2021-10-25 09:35:40.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038250 has a single transcript. 2021-10-25 09:35:40.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038251: ['FBtr0082968', 'FBtr0082967'] 2021-10-25 09:35:40.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17460443, 17460503), (17461198, 17461261), (17462123, 17463592), (17463820, 17463875), (17464948, 17506585), (17464948, 17532850), (17464948, 17488993), (17464948, 17531109), (17464948, 17488239), (17464948, 17474815), (17475354, 17475411), (17488479, 17506585), (17534023, 17534080), (17534656, 17553072), (17554083, 17560828)] 2021-10-25 09:35:40.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.699 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0310336': ['FBtr0330597'], 'FBtr0310337': ['FBtr0342802']} 2021-10-25 09:35:40.699 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330597'], ['FBtr0342802']] 2021-10-25 09:35:40.733 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14659582, 14659743), (14659615, 14659743), (14660310, 14660374)] 2021-10-25 09:35:40.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.734 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16669224, 16669312), (16669442, 16670056), (16670135, 16672912), (16670135, 16676135), (16670135, 16676170), (16670135, 16672919)] 2021-10-25 09:35:40.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.761 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19134276, 19145793), (19145844, 19166084), (19158689, 19166084), (19158755, 19166084), (19165988, 19166084), (19166358, 19168094), (19171251, 19177443)] 2021-10-25 09:35:40.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19168094, 19179758, 'FBtr0081160_exon_3') contains intron (19171251, 19177443) 2021-10-25 09:35:40.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081160_exon_3'] 2021-10-25 09:35:40.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034545: ['FBtr0086237'] 2021-10-25 09:35:40.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034545 has a single transcript. 2021-10-25 09:35:40.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034546: ['FBtr0086240'] 2021-10-25 09:35:40.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034546 has a single transcript. 2021-10-25 09:35:40.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038252: ['FBtr0082969'] 2021-10-25 09:35:40.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038252 has a single transcript. 2021-10-25 09:35:40.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034548: ['FBtr0086239'] 2021-10-25 09:35:40.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034548 has a single transcript. 2021-10-25 09:35:40.800 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034551: ['FBtr0342791'] 2021-10-25 09:35:40.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034551 has a single transcript. 2021-10-25 09:35:40.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038256: ['FBtr0083019', 'FBtr0083020', 'FBtr0083021', 'FBtr0333277'] 2021-10-25 09:35:40.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034552: ['FBtr0071561'] 2021-10-25 09:35:40.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034552 has a single transcript. 2021-10-25 09:35:40.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034553: ['FBtr0071560'] 2021-10-25 09:35:40.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034553 has a single transcript. 2021-10-25 09:35:40.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034554: ['FBtr0335284'] 2021-10-25 09:35:40.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034554 has a single transcript. 2021-10-25 09:35:40.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034558: ['FBtr0304717'] 2021-10-25 09:35:40.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034558 has a single transcript. 2021-10-25 09:35:40.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034560: ['FBtr0071517'] 2021-10-25 09:35:40.844 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034560 has a single transcript. 2021-10-25 09:35:40.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034563: ['FBtr0071555', 'FBtr0300563'] 2021-10-25 09:35:40.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030770: ['FBtr0074373'] 2021-10-25 09:35:40.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030770 has a single transcript. 2021-10-25 09:35:40.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051354: ['FBtr0082636'] 2021-10-25 09:35:40.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051354 has a single transcript. 2021-10-25 09:35:40.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030773: ['FBtr0074364'] 2021-10-25 09:35:40.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030773 has a single transcript. 2021-10-25 09:35:40.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20973394, 20973457), (20973634, 20973907)] 2021-10-25 09:35:40.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14725389, 14725456), (14725930, 14726039), (14726147, 14727189), (14727327, 14728781), (14727327, 14730510), (14730629, 14731404), (14730629, 14731039)] 2021-10-25 09:35:40.909 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14730510, 14731509, 'FBtr0083019_exon_1') contains intron (14730629, 14731404) 2021-10-25 09:35:40.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051356: ['FBtr0082558'] 2021-10-25 09:35:40.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051356 has a single transcript. 2021-10-25 09:35:40.911 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083019_exon_1'] 2021-10-25 09:35:40.911 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030774: ['FBtr0074363'] 2021-10-25 09:35:40.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030774 has a single transcript. 2021-10-25 09:35:40.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051357: ['FBtr0084735'] 2021-10-25 09:35:40.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051357 has a single transcript. 2021-10-25 09:35:40.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030775: ['FBtr0074362', 'FBtr0339830'] 2021-10-25 09:35:40.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051358: ['FBtr0082554', 'FBtr0339640'] 2021-10-25 09:35:40.963 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16703508, 16703629)] 2021-10-25 09:35:40.964 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.964 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263707: ['FBtr0310345'] 2021-10-25 09:35:40.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263707 has a single transcript. 2021-10-25 09:35:40.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034564: ['FBtr0071520'] 2021-10-25 09:35:40.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034564 has a single transcript. 2021-10-25 09:35:40.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12027914, 12029715), (12030724, 12030787), (12030953, 12031008), (12031368, 12031424), (12031569, 12031637)] 2021-10-25 09:35:40.973 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:40.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:40.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263708: ['FBtr0310349'] 2021-10-25 09:35:40.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263708 has a single transcript. 2021-10-25 09:35:40.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034565: ['FBtr0071554', 'FBtr0345667'] 2021-10-25 09:35:40.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263709: ['FBtr0310348'] 2021-10-25 09:35:40.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263709 has a single transcript. 2021-10-25 09:35:40.982 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010303: ['FBtr0073747', 'FBtr0073748', 'FBtr0340303', 'FBtr0330396', 'FBtr0330397'] 2021-10-25 09:35:40.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263738: ['FBtr0310380', 'FBtr0310381', 'FBtr0310382', 'FBtr0310383', 'FBtr0310384'] 2021-10-25 09:35:41.020 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20978126, 20978198)] 2021-10-25 09:35:41.021 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.021 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051360: ['FBtr0083480'] 2021-10-25 09:35:41.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051360 has a single transcript. 2021-10-25 09:35:41.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030776: ['FBtr0074321'] 2021-10-25 09:35:41.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030776 has a single transcript. 2021-10-25 09:35:41.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051361: ['FBtr0082542', 'FBtr0082543', 'FBtr0300126', 'FBtr0339641', 'FBtr0339642'] 2021-10-25 09:35:41.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030777: ['FBtr0074361'] 2021-10-25 09:35:41.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030777 has a single transcript. 2021-10-25 09:35:41.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030778: ['FBtr0339827', 'FBtr0339828', 'FBtr0339829', 'FBtr0300032', 'FBtr0300033', 'FBtr0300034', 'FBtr0300035', 'FBtr0308847'] 2021-10-25 09:35:41.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038257: ['FBtr0083016', 'FBtr0083017', 'FBtr0336877', 'FBtr0336878'] 2021-10-25 09:35:41.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034566: ['FBtr0071521', 'FBtr0345666', 'FBtr0342788'] 2021-10-25 09:35:41.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13080567, 13080637), (13081043, 13081512), (13081118, 13081512), (13082064, 13082127), (13082538, 13082607), (13083098, 13084244), (13083098, 13085595), (13083568, 13084244), (13084570, 13085595), (13085751, 13085824), (13086045, 13086411), (13086591, 13086652), (13087140, 13089358)] 2021-10-25 09:35:41.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18253212, 18253274), (18253455, 18253525), (18253792, 18253852), (18254316, 18254374), (18255191, 18255316), (18255236, 18255316)] 2021-10-25 09:35:41.105 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18253274, 18254316, 'FBtr0310380_exon_3') contains intron (18253455, 18253525) 2021-10-25 09:35:41.105 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18253274, 18254316, 'FBtr0310381_exon_3') contains intron (18253455, 18253525) 2021-10-25 09:35:41.106 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18253274, 18253792, 'FBtr0310382_exon_4') contains intron (18253455, 18253525) 2021-10-25 09:35:41.106 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18253274, 18253792, 'FBtr0310383_exon_4') contains intron (18253455, 18253525) 2021-10-25 09:35:41.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310380_exon_3', 'FBtr0310381_exon_3', 'FBtr0310382_exon_4', 'FBtr0310383_exon_4'] 2021-10-25 09:35:41.106 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.113 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0340303': ['FBtr0330396']} 2021-10-25 09:35:41.113 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330396']] 2021-10-25 09:35:41.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20979553, 20981307), (20979553, 20981310), (20981741, 20981800), (20982035, 20982096), (20982523, 20982585), (20982663, 20982728), (20983542, 20983612)] 2021-10-25 09:35:41.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.159 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12095300, 12096048), (12097016, 12107138), (12098656, 12107138), (12108082, 12109933), (12110171, 12110290), (12110505, 12110581), (12110687, 12110831), (12111033, 12111103), (12111033, 12111087)] 2021-10-25 09:35:41.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12110831, 12111420, 'FBtr0082542_exon_7') contains intron (12111033, 12111103) 2021-10-25 09:35:41.160 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12110831, 12111420, 'FBtr0339641_exon_6') contains intron (12111033, 12111103) 2021-10-25 09:35:41.160 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12110831, 12111420, 'FBtr0339642_exon_6') contains intron (12111033, 12111103) 2021-10-25 09:35:41.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082542_exon_7', 'FBtr0339641_exon_6', 'FBtr0339642_exon_6'] 2021-10-25 09:35:41.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14746348, 14746406), (14747125, 14751120), (14747125, 14747273), (14747125, 14748578)] 2021-10-25 09:35:41.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010309: ['FBtr0081194', 'FBtr0302561'] 2021-10-25 09:35:41.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16696217, 16696496), (16696257, 16696496), (16696624, 16708158), (16696624, 16707652), (16707934, 16708158), (16708491, 16708550), (16708738, 16709358), (16708738, 16709239), (16708738, 16709251), (16708738, 16709373), (16709281, 16709373), (16709669, 16709735), (16709912, 16709984), (16710077, 16710203), (16710077, 16710777), (16710313, 16710777)] 2021-10-25 09:35:41.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034567: ['FBtr0071553'] 2021-10-25 09:35:41.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034567 has a single transcript. 2021-10-25 09:35:41.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034568: ['FBtr0273396', 'FBtr0273397'] 2021-10-25 09:35:41.280 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19186192, 19186250), (19186655, 19186718), (19187020, 19187078), (19188242, 19188298), (19188531, 19188590), (19188805, 19188875), (19189100, 19189445), (19189100, 19189181), (19189328, 19189445)] 2021-10-25 09:35:41.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263740: ['FBtr0310386', 'FBtr0310387', 'FBtr0337054'] 2021-10-25 09:35:41.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20987667, 20987728), (20988053, 20988111), (20988755, 20988812), (20988755, 20989133), (20988891, 20988955), (20989071, 20989133), (20989689, 20989745), (20990022, 20990122), (20990200, 20990478), (20990644, 20990709), (20990821, 20990873)] 2021-10-25 09:35:41.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038258: ['FBtr0331700'] 2021-10-25 09:35:41.323 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038258 has a single transcript. 2021-10-25 09:35:41.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038260: ['FBtr0082991'] 2021-10-25 09:35:41.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038260 has a single transcript. 2021-10-25 09:35:41.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038261: ['FBtr0082992'] 2021-10-25 09:35:41.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010313: ['FBtr0078844', 'FBtr0345141', 'FBtr0308118', 'FBtr0308119', 'FBtr0308120'] 2021-10-25 09:35:41.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038261 has a single transcript. 2021-10-25 09:35:41.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038262: ['FBtr0082993'] 2021-10-25 09:35:41.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038262 has a single transcript. 2021-10-25 09:35:41.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038266: ['FBtr0082994'] 2021-10-25 09:35:41.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038266 has a single transcript. 2021-10-25 09:35:41.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038268: ['FBtr0082997', 'FBtr0114533', 'FBtr0344378'] 2021-10-25 09:35:41.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051363: ['FBtr0082452', 'FBtr0082453', 'FBtr0082454', 'FBtr0082455', 'FBtr0082456', 'FBtr0082457', 'FBtr0335232'] 2021-10-25 09:35:41.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15258442, 15258509), (15259383, 15259449), (15259686, 15262546), (15262721, 15262796), (15262721, 15263281)] 2021-10-25 09:35:41.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034569: ['FBtr0273414'] 2021-10-25 09:35:41.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034569 has a single transcript. 2021-10-25 09:35:41.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034570: ['FBtr0071524', 'FBtr0303195', 'FBtr0332593', 'FBtr0332594'] 2021-10-25 09:35:41.453 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14879760, 14879831), (14879765, 14879831), (14880043, 14880163), (14880794, 14880957), (14881535, 14881595), (14881796, 14881852)] 2021-10-25 09:35:41.453 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14879456, 14880043, 'FBtr0082997_exon_1') contains intron (14879760, 14879831) 2021-10-25 09:35:41.454 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082997_exon_1'] 2021-10-25 09:35:41.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.478 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:41.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263741: ['FBtr0310390'] 2021-10-25 09:35:41.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263741 has a single transcript. 2021-10-25 09:35:41.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263742: ['FBtr0310389'] 2021-10-25 09:35:41.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263742 has a single transcript. 2021-10-25 09:35:41.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263743: ['FBtr0310388'] 2021-10-25 09:35:41.529 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263743 has a single transcript. 2021-10-25 09:35:41.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20996928, 21001011), (21000830, 21001011), (21002426, 21002490), (21003325, 21003392), (21003525, 21003639), (21004094, 21004152), (21004261, 21004323), (21004261, 21004326)] 2021-10-25 09:35:41.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263744: ['FBtr0310393'] 2021-10-25 09:35:41.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263744 has a single transcript. 2021-10-25 09:35:41.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263745: ['FBtr0310392'] 2021-10-25 09:35:41.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263745 has a single transcript. 2021-10-25 09:35:41.552 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263746: ['FBtr0310391'] 2021-10-25 09:35:41.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263746 has a single transcript. 2021-10-25 09:35:41.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11591307, 11591500), (11591307, 11591994), (11591307, 11592366), (11591307, 11593632), (11591911, 11591994), (11592012, 11592366), (11592624, 11593321), (11592624, 11593632), (11593354, 11593632), (11593766, 11619703), (11593766, 11604141), (11604239, 11604585), (11604283, 11604585)] 2021-10-25 09:35:41.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263747: ['FBtr0310394'] 2021-10-25 09:35:41.562 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263747 has a single transcript. 2021-10-25 09:35:41.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263748: ['FBtr0310395'] 2021-10-25 09:35:41.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263748 has a single transcript. 2021-10-25 09:35:41.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038269: ['FBtr0113235', 'FBtr0346063'] 2021-10-25 09:35:41.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263750: ['FBtr0344371', 'FBtr0344372', 'FBtr0310402'] 2021-10-25 09:35:41.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030780: ['FBtr0074322'] 2021-10-25 09:35:41.623 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030780 has a single transcript. 2021-10-25 09:35:41.623 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14882804, 14882896), (14883823, 14884061), (14885466, 14885578), (14885760, 14885834)] 2021-10-25 09:35:41.624 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.624 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030786: ['FBtr0074330'] 2021-10-25 09:35:41.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030786 has a single transcript. 2021-10-25 09:35:41.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030787: ['FBtr0074356'] 2021-10-25 09:35:41.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030787 has a single transcript. 2021-10-25 09:35:41.642 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9355703, 9355972), (9356325, 9356423), (9357455, 9357983), (9358176, 9358255)] 2021-10-25 09:35:41.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030788: ['FBtr0074331', 'FBtr0344089'] 2021-10-25 09:35:41.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038271: ['FBtr0083000', 'FBtr0083001'] 2021-10-25 09:35:41.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034572: ['FBtr0071526'] 2021-10-25 09:35:41.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16787540, 16787684), (16788342, 16788566)] 2021-10-25 09:35:41.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034572 has a single transcript. 2021-10-25 09:35:41.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.690 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034573: ['FBtr0071547'] 2021-10-25 09:35:41.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034573 has a single transcript. 2021-10-25 09:35:41.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010314: ['FBtr0079799'] 2021-10-25 09:35:41.705 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010314 has a single transcript. 2021-10-25 09:35:41.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034576: ['FBtr0071530'] 2021-10-25 09:35:41.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034576 has a single transcript. 2021-10-25 09:35:41.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010315: ['FBtr0300391', 'FBtr0300392', 'FBtr0300393'] 2021-10-25 09:35:41.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034577: ['FBtr0071532'] 2021-10-25 09:35:41.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034577 has a single transcript. 2021-10-25 09:35:41.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034578: ['FBtr0071545'] 2021-10-25 09:35:41.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034578 has a single transcript. 2021-10-25 09:35:41.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034579: ['FBtr0071533'] 2021-10-25 09:35:41.734 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034579 has a single transcript. 2021-10-25 09:35:41.736 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14890261, 14890333), (14890426, 14890695), (14890902, 14890961), (14891290, 14891352), (14891723, 14891784), (14891876, 14891950)] 2021-10-25 09:35:41.737 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14890230, 14890426, 'FBtr0083000_exon_1') contains intron (14890261, 14890333) 2021-10-25 09:35:41.738 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083000_exon_1'] 2021-10-25 09:35:41.738 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034580: ['FBtr0071534'] 2021-10-25 09:35:41.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034580 has a single transcript. 2021-10-25 09:35:41.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263755: ['FBtr0310385'] 2021-10-25 09:35:41.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263755 has a single transcript. 2021-10-25 09:35:41.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034582: ['FBtr0071542'] 2021-10-25 09:35:41.748 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034582 has a single transcript. 2021-10-25 09:35:41.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030789: ['FBtr0074355', 'FBtr0344090'] 2021-10-25 09:35:41.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034583: ['FBtr0071541'] 2021-10-25 09:35:41.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034583 has a single transcript. 2021-10-25 09:35:41.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263757: ['FBtr0310379'] 2021-10-25 09:35:41.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263757 has a single transcript. 2021-10-25 09:35:41.762 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034585: ['FBtr0071640'] 2021-10-25 09:35:41.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034585 has a single transcript. 2021-10-25 09:35:41.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263760: ['FBtr0310452'] 2021-10-25 09:35:41.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263760 has a single transcript. 2021-10-25 09:35:41.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034588: ['FBtr0071567', 'FBtr0345356'] 2021-10-25 09:35:41.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263761: ['FBtr0310458'] 2021-10-25 09:35:41.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263761 has a single transcript. 2021-10-25 09:35:41.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263762: ['FBtr0310456', 'FBtr0310457'] 2021-10-25 09:35:41.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16789717, 16789772), (16790513, 16790673)] 2021-10-25 09:35:41.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15907591, 15907653), (15907799, 15907858), (15908033, 15908096), (15908318, 15908536), (15909222, 15909419), (15909222, 15909530)] 2021-10-25 09:35:41.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15908536, 15909676, 'FBtr0300393_exon_1') contains intron (15909222, 15909419) 2021-10-25 09:35:41.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300393_exon_1'] 2021-10-25 09:35:41.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038272: ['FBtr0083009'] 2021-10-25 09:35:41.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038272 has a single transcript. 2021-10-25 09:35:41.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038273: ['FBtr0289976'] 2021-10-25 09:35:41.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038273 has a single transcript. 2021-10-25 09:35:41.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038274: ['FBtr0083008'] 2021-10-25 09:35:41.815 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038274 has a single transcript. 2021-10-25 09:35:41.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038275: ['FBtr0083003'] 2021-10-25 09:35:41.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038275 has a single transcript. 2021-10-25 09:35:41.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:41.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038277: ['FBtr0083006', 'FBtr0308031'] 2021-10-25 09:35:41.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15051261, 15051315)] 2021-10-25 09:35:41.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14900694, 14900820), (14900694, 14900952), (14900897, 14900952)] 2021-10-25 09:35:41.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.870 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051365: ['FBtr0084406'] 2021-10-25 09:35:41.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051365 has a single transcript. 2021-10-25 09:35:41.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030790: ['FBtr0074332', 'FBtr0305899', 'FBtr0347029'] 2021-10-25 09:35:41.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051368: ['FBtr0301041', 'FBtr0301042'] 2021-10-25 09:35:41.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263763: ['FBtr0310455'] 2021-10-25 09:35:41.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263763 has a single transcript. 2021-10-25 09:35:41.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010316: ['FBtr0088469'] 2021-10-25 09:35:41.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010316 has a single transcript. 2021-10-25 09:35:41.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034590: ['FBtr0071636', 'FBtr0342873', 'FBtr0342874'] 2021-10-25 09:35:41.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263764: ['FBtr0344212', 'FBtr0344213'] 2021-10-25 09:35:41.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010317: ['FBtr0073128', 'FBtr0073127'] 2021-10-25 09:35:41.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11882987, 11883048), (11883529, 11883591), (11883935, 11888493), (11889528, 11889590), (11890045, 11890142), (11891358, 11891422), (11891791, 11891850), (11891791, 11891859)] 2021-10-25 09:35:41.922 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038279: ['FBtr0083004', 'FBtr0346103'] 2021-10-25 09:35:41.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16792734, 16794288), (16794378, 16794449), (16794636, 16794695), (16794923, 16795194)] 2021-10-25 09:35:41.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:41.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11390639, 11390861), (11391418, 11392234)] 2021-10-25 09:35:41.957 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11387869, 11391418, 'FBtr0344212_exon_2') contains intron (11390639, 11390861) 2021-10-25 09:35:41.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344212_exon_2'] 2021-10-25 09:35:41.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:41.970 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3466622, 3466685), (3466872, 3466949), (3467372, 3467432), (3467372, 3467425)] 2021-10-25 09:35:42.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21130308, 21130364), (21130590, 21130648), (21132662, 21132727), (21132914, 21138225), (21139232, 21139600), (21139232, 21141538)] 2021-10-25 09:35:42.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14919429, 14919507), (14920045, 14920103), (14920251, 14920312), (14920708, 14920771), (14920988, 14921040), (14921297, 14921367)] 2021-10-25 09:35:42.553 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.572 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051370: ['FBtr0290055'] 2021-10-25 09:35:42.572 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051370 has a single transcript. 2021-10-25 09:35:42.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051371: ['FBtr0302522', 'FBtr0307535'] 2021-10-25 09:35:42.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010323: ['FBtr0343220', 'FBtr0343221', 'FBtr0347398'] 2021-10-25 09:35:42.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263765: ['FBtr0310479'] 2021-10-25 09:35:42.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263765 has a single transcript. 2021-10-25 09:35:42.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263766: ['FBtr0310481'] 2021-10-25 09:35:42.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263766 has a single transcript. 2021-10-25 09:35:42.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038280: ['FBtr0083023'] 2021-10-25 09:35:42.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038280 has a single transcript. 2021-10-25 09:35:42.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263767: ['FBtr0310484'] 2021-10-25 09:35:42.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038281: ['FBtr0083024'] 2021-10-25 09:35:42.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263767 has a single transcript. 2021-10-25 09:35:42.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038281 has a single transcript. 2021-10-25 09:35:42.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038282: ['FBtr0089376', 'FBtr0346114'] 2021-10-25 09:35:42.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263768: ['FBtr0310485', 'FBtr0310486'] 2021-10-25 09:35:42.713 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30501243, 30501583), (30501243, 30501453), (30501500, 30501583), (30501758, 30501831), (30502260, 30502398), (30502553, 30502622), (30502813, 30502875)] 2021-10-25 09:35:42.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030791: ['FBtr0074353', 'FBtr0074354', 'FBtr0306801'] 2021-10-25 09:35:42.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034592: ['FBtr0071570'] 2021-10-25 09:35:42.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034592 has a single transcript. 2021-10-25 09:35:42.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7093046, 7093109), (7093479, 7093604), (7093479, 7093536)] 2021-10-25 09:35:42.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.821 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.822 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(584445, 592271), (584445, 587829), (592633, 593587)] 2021-10-25 09:35:42.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034595: ['FBtr0071635', 'FBtr0342872'] 2021-10-25 09:35:42.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.824 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15057593, 15061458), (15061645, 15062350), (15062478, 15063119), (15063342, 15066595), (15067083, 15071451), (15072259, 15076129), (15076286, 15077035)] 2021-10-25 09:35:42.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051373: ['FBtr0082318'] 2021-10-25 09:35:42.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051373 has a single transcript. 2021-10-25 09:35:42.830 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.842 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0343220': ['FBtr0343221']} 2021-10-25 09:35:42.842 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0343221']] 2021-10-25 09:35:42.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16798684, 16798749), (16798958, 16799181), (16799578, 16800525), (16799578, 16800064)] 2021-10-25 09:35:42.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051374: ['FBtr0082400', 'FBtr0082401', 'FBtr0082399', 'FBtr0300812', 'FBtr0308210', 'FBtr0306100', 'FBtr0306101', 'FBtr0339377'] 2021-10-25 09:35:42.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21147970, 21148029)] 2021-10-25 09:35:42.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:42.873 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:42.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263769: ['FBtr0310488'] 2021-10-25 09:35:42.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263769 has a single transcript. 2021-10-25 09:35:42.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263770: ['FBtr0310489'] 2021-10-25 09:35:42.901 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263770 has a single transcript. 2021-10-25 09:35:42.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010328: ['FBtr0085178', 'FBtr0112857', 'FBtr0308502', 'FBtr0334730', 'FBtr0334731'] 2021-10-25 09:35:42.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263771: ['FBtr0310490'] 2021-10-25 09:35:42.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263771 has a single transcript. 2021-10-25 09:35:42.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263772: ['FBtr0310491', 'FBtr0310492', 'FBtr0310493', 'FBtr0310494', 'FBtr0310495', 'FBtr0339681'] 2021-10-25 09:35:42.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038285: ['FBtr0083042'] 2021-10-25 09:35:42.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038285 has a single transcript. 2021-10-25 09:35:42.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038286: ['FBtr0113236', 'FBtr0344380'] 2021-10-25 09:35:43.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034598: ['FBtr0071629', 'FBtr0113100', 'FBtr0342871', 'FBtr0310422'] 2021-10-25 09:35:43.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030792: ['FBtr0074333'] 2021-10-25 09:35:43.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030792 has a single transcript. 2021-10-25 09:35:43.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030793: ['FBtr0074352'] 2021-10-25 09:35:43.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030793 has a single transcript. 2021-10-25 09:35:43.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030794: ['FBtr0074334'] 2021-10-25 09:35:43.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030794 has a single transcript. 2021-10-25 09:35:43.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15081383, 15081445), (15082232, 15082300), (15082901, 15083118), (15083479, 15094866)] 2021-10-25 09:35:43.158 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030795: ['FBtr0074335'] 2021-10-25 09:35:43.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030795 has a single transcript. 2021-10-25 09:35:43.175 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030796: ['FBtr0074336', 'FBtr0074337', 'FBtr0074338', 'FBtr0112994', 'FBtr0112995', 'FBtr0335278'] 2021-10-25 09:35:43.292 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27257480, 27257543), (27257643, 27257708), (27257838, 27257896), (27258018, 27258082), (27258208, 27258272), (27258658, 27258721), (27259797, 27259856), (27259797, 27260090), (27261940, 27262226), (27261940, 27262115), (27261943, 27262115), (27261943, 27262226), (27262160, 27262226), (27262487, 27262554), (27263451, 27263734), (27263451, 27263776)] 2021-10-25 09:35:43.295 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.295 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038290: ['FBtr0083038'] 2021-10-25 09:35:43.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038290 has a single transcript. 2021-10-25 09:35:43.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038291: ['FBtr0083025'] 2021-10-25 09:35:43.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038291 has a single transcript. 2021-10-25 09:35:43.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038292: ['FBtr0083026'] 2021-10-25 09:35:43.330 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038292 has a single transcript. 2021-10-25 09:35:43.338 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21163151, 21163365), (21163695, 21163753), (21164239, 21164299), (21165043, 21166729), (21165043, 21165558), (21165874, 21166729), (21166834, 21166889), (21166834, 21166898), (21167042, 21167595), (21167042, 21167171), (21167444, 21167595), (21168183, 21168431)] 2021-10-25 09:35:43.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038294: ['FBtr0083032', 'FBtr0083033', 'FBtr0083034', 'FBtr0083030', 'FBtr0083031', 'FBtr0302142', 'FBtr0302143', 'FBtr0302144', 'FBtr0302145', 'FBtr0302146', 'FBtr0306642', 'FBtr0306643', 'FBtr0306644', 'FBtr0334927', 'FBtr0334928', 'FBtr0345219', 'FBtr0345220'] 2021-10-25 09:35:43.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4076426, 4077874), (4078388, 4078478), (4079131, 4082430), (4079131, 4082793), (4079131, 4081353), (4081422, 4082430), (4082604, 4082793), (4084345, 4084438), (4084704, 4084790), (4085019, 4085617), (4085875, 4085939), (4086052, 4086169), (4086250, 4087053), (4086250, 4088013), (4087383, 4088013), (4088348, 4089829)] 2021-10-25 09:35:43.383 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4077874, 4079131, 'FBtr0310491_exon_2') contains intron (4078388, 4078478) 2021-10-25 09:35:43.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4077874, 4079131, 'FBtr0310492_exon_2') contains intron (4078388, 4078478) 2021-10-25 09:35:43.384 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4077874, 4079131, 'FBtr0310493_exon_2') contains intron (4078388, 4078478) 2021-10-25 09:35:43.385 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4077874, 4079131, 'FBtr0310494_exon_2') contains intron (4078388, 4078478) 2021-10-25 09:35:43.386 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4077874, 4079131, 'FBtr0310495_exon_2') contains intron (4078388, 4078478) 2021-10-25 09:35:43.387 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310491_exon_2', 'FBtr0310492_exon_2', 'FBtr0310493_exon_2', 'FBtr0310494_exon_2', 'FBtr0310495_exon_2'] 2021-10-25 09:35:43.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11438081, 11438142), (11438365, 11438423), (11438686, 11439884), (11438686, 11438779), (11438887, 11439884), (11440635, 11440895), (11440985, 11441122), (11441246, 11451631), (11441246, 11445856), (11441246, 11447118), (11448359, 11451066), (11448359, 11451088), (11448362, 11451066), (11448362, 11451088)] 2021-10-25 09:35:43.393 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.393 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16812061, 16822556), (16817004, 16822556), (16817134, 16822556), (16822772, 16823102), (16823206, 16823586), (16823206, 16823856), (16823206, 16823514), (16824118, 16824358), (16824772, 16824921), (16825563, 16825636)] 2021-10-25 09:35:43.533 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.533 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010329: ['FBtr0089999', 'FBtr0340409'] 2021-10-25 09:35:43.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034599: ['FBtr0071575'] 2021-10-25 09:35:43.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034599 has a single transcript. 2021-10-25 09:35:43.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034601: ['FBtr0071627'] 2021-10-25 09:35:43.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034601 has a single transcript. 2021-10-25 09:35:43.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034602: ['FBtr0071583'] 2021-10-25 09:35:43.669 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034602 has a single transcript. 2021-10-25 09:35:43.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034605: ['FBtr0071624', 'FBtr0110814'] 2021-10-25 09:35:43.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7995793, 7999270), (7999655, 8022404), (8022763, 8022821), (8022973, 8023036), (8023428, 8023675), (8024025, 8024120), (8024308, 8025545)] 2021-10-25 09:35:43.702 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.702 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.758 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21215908, 21215970), (21216449, 21216505), (21216967, 21217015), (21217174, 21217236), (21217434, 21217652), (21217434, 21217727)] 2021-10-25 09:35:43.760 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010333: ['FBtr0072730', 'FBtr0331868'] 2021-10-25 09:35:43.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034606: ['FBtr0071622', 'FBtr0071623', 'FBtr0330232'] 2021-10-25 09:35:43.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:43.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:43.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:43.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051380: ['FBtr0084918'] 2021-10-25 09:35:43.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030797: ['FBtr0074351', 'FBtr0304152', 'FBtr0112996', 'FBtr0308682'] 2021-10-25 09:35:43.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051380 has a single transcript. 2021-10-25 09:35:43.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051382: ['FBtr0084714'] 2021-10-25 09:35:43.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051382 has a single transcript. 2021-10-25 09:35:43.975 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051383: ['FBtr0085637'] 2021-10-25 09:35:43.975 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051383 has a single transcript. 2021-10-25 09:35:43.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051386: ['FBtr0308921'] 2021-10-25 09:35:43.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051386 has a single transcript. 2021-10-25 09:35:43.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051388: ['FBtr0082356', 'FBtr0304709'] 2021-10-25 09:35:44.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010339: ['FBtr0087976'] 2021-10-25 09:35:44.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010339 has a single transcript. 2021-10-25 09:35:44.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010340: ['FBtr0082909', 'FBtr0337095'] 2021-10-25 09:35:44.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263773: ['FBtr0310558', 'FBtr0310559', 'FBtr0310560', 'FBtr0310561'] 2021-10-25 09:35:44.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21218994, 21219098), (21219301, 21219374), (21219592, 21219672), (21221747, 21221819), (21222040, 21223016), (21223284, 21238840), (21223284, 21223606), (21238899, 21250537), (21238899, 21250542)] 2021-10-25 09:35:44.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.041 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11237985, 11238052), (11238609, 11238956), (11238609, 11238810), (11238900, 11238956), (11239041, 11239110), (11239433, 11239510), (11239627, 11239895)] 2021-10-25 09:35:44.042 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15171374, 15171935), (15171374, 15172599), (15171374, 15176183), (15172106, 15174136), (15172106, 15172599), (15172830, 15174136), (15172830, 15173980), (15173063, 15174136), (15174343, 15176183), (15175863, 15176183), (15176293, 15176363), (15176412, 15178279), (15176427, 15178279), (15176433, 15178279), (15176433, 15176538), (15178489, 15179038), (15179180, 15181446), (15179180, 15180207), (15179180, 15180292), (15179180, 15179321)] 2021-10-25 09:35:44.061 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15176363, 15178489, 'FBtr0345219_exon_3') contains intron (15176412, 15178279) 2021-10-25 09:35:44.062 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15175338, 15176293, 'FBtr0345220_exon_5') contains intron (15175863, 15176183) 2021-10-25 09:35:44.062 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345219_exon_3', 'FBtr0345220_exon_5'] 2021-10-25 09:35:44.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14124862, 14124924), (14125013, 14125074), (14125240, 14125303)] 2021-10-25 09:35:44.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16827605, 16827675), (16828075, 16834611), (16828075, 16829039), (16828116, 16828177), (16829126, 16834611)] 2021-10-25 09:35:44.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051390: ['FBtr0082311'] 2021-10-25 09:35:44.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051390 has a single transcript. 2021-10-25 09:35:44.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051391: ['FBtr0082321'] 2021-10-25 09:35:44.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051391 has a single transcript. 2021-10-25 09:35:44.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051404: ['FBtr0083774'] 2021-10-25 09:35:44.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051404 has a single transcript. 2021-10-25 09:35:44.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20079472, 20080005), (20079472, 20084577), (20083015, 20084577)] 2021-10-25 09:35:44.126 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.126 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051406: ['FBtr0082235', 'FBtr0082236'] 2021-10-25 09:35:44.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010341: ['FBtr0074751', 'FBtr0309214', 'FBtr0309215'] 2021-10-25 09:35:44.154 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034611: ['FBtr0071589', 'FBtr0071590', 'FBtr0071591', 'FBtr0342884'] 2021-10-25 09:35:44.174 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10349117, 10349179), (10349117, 10349544), (10349482, 10349544), (10349607, 10349667), (10349739, 10349795)] 2021-10-25 09:35:44.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.175 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.203 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19697152, 19697934), (19697225, 19697934), (19698245, 19698306)] 2021-10-25 09:35:44.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030798: ['FBtr0074349', 'FBtr0300431', 'FBtr0331739'] 2021-10-25 09:35:44.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051407: ['FBtr0082214', 'FBtr0344336'] 2021-10-25 09:35:44.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21282391, 21282986), (21282564, 21282986), (21282830, 21282986), (21283212, 21283330), (21283482, 21283542), (21284111, 21284381), (21284592, 21284649), (21284798, 21284854)] 2021-10-25 09:35:44.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10023486, 10025014)] 2021-10-25 09:35:44.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263774: ['FBtr0310562', 'FBtr0345942'] 2021-10-25 09:35:44.291 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16846626, 16846941), (16848958, 16849295), (16849941, 16853131), (16849941, 16857440), (16857859, 16864184), (16864218, 16876019), (16864218, 16874542)] 2021-10-25 09:35:44.292 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16846941, 16849941, 'FBtr0074349_exon_2') contains intron (16848958, 16849295) 2021-10-25 09:35:44.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074349_exon_2'] 2021-10-25 09:35:44.293 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010342: ['FBtr0088530'] 2021-10-25 09:35:44.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010342 has a single transcript. 2021-10-25 09:35:44.328 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13390449, 13390524)] 2021-10-25 09:35:44.329 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.329 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010348: ['FBtr0078571', 'FBtr0078573', 'FBtr0078574', 'FBtr0078575', 'FBtr0112858', 'FBtr0299906', 'FBtr0299907', 'FBtr0332054'] 2021-10-25 09:35:44.341 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051410: ['FBtr0273369'] 2021-10-25 09:35:44.342 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051410 has a single transcript. 2021-10-25 09:35:44.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051413: ['FBtr0084442'] 2021-10-25 09:35:44.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051413 has a single transcript. 2021-10-25 09:35:44.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051414: ['FBtr0113405', 'FBtr0334767'] 2021-10-25 09:35:44.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030799: ['FBtr0074339'] 2021-10-25 09:35:44.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030799 has a single transcript. 2021-10-25 09:35:44.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263776: ['FBtr0310563', 'FBtr0310564', 'FBtr0310565', 'FBtr0310566', 'FBtr0310567', 'FBtr0310568', 'FBtr0310569'] 2021-10-25 09:35:44.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23704897, 23704964), (23705107, 23705349), (23705509, 23705580), (23705728, 23705780), (23706101, 23706158), (23706288, 23706366), (23706480, 23706540), (23707064, 23707811)] 2021-10-25 09:35:44.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030800: ['FBtr0074348'] 2021-10-25 09:35:44.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030800 has a single transcript. 2021-10-25 09:35:44.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034612: ['FBtr0071619'] 2021-10-25 09:35:44.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034612 has a single transcript. 2021-10-25 09:35:44.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030801: ['FBtr0074341', 'FBtr0342976'] 2021-10-25 09:35:44.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034614: ['FBtr0071616'] 2021-10-25 09:35:44.420 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034614 has a single transcript. 2021-10-25 09:35:44.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034617: ['FBtr0071615'] 2021-10-25 09:35:44.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034617 has a single transcript. 2021-10-25 09:35:44.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034618: ['FBtr0071600', 'FBtr0071599', 'FBtr0071601', 'FBtr0300394', 'FBtr0300395', 'FBtr0310327'] 2021-10-25 09:35:44.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16884608, 16884685), (16884800, 16884863), (16885016, 16885075), (16885604, 16886299)] 2021-10-25 09:35:44.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051415: ['FBtr0082127'] 2021-10-25 09:35:44.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051415 has a single transcript. 2021-10-25 09:35:44.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051416: ['FBtr0084721'] 2021-10-25 09:35:44.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051416 has a single transcript. 2021-10-25 09:35:44.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051418: ['FBtr0083432'] 2021-10-25 09:35:44.476 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051418 has a single transcript. 2021-10-25 09:35:44.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051419: ['FBtr0309516'] 2021-10-25 09:35:44.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051419 has a single transcript. 2021-10-25 09:35:44.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051423: ['FBtr0336965'] 2021-10-25 09:35:44.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051423 has a single transcript. 2021-10-25 09:35:44.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051424: ['FBtr0336966'] 2021-10-25 09:35:44.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051424 has a single transcript. 2021-10-25 09:35:44.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051427: ['FBtr0445668'] 2021-10-25 09:35:44.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051427 has a single transcript. 2021-10-25 09:35:44.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051431: ['FBtr0084137', 'FBtr0308826', 'FBtr0308827'] 2021-10-25 09:35:44.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030802: ['FBtr0074347', 'FBtr0310520'] 2021-10-25 09:35:44.526 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22869246, 22869345), (22869471, 22869664), (22869774, 22869841), (22870065, 22871923), (22870065, 22871459), (22870150, 22872056), (22870150, 22870214), (22870150, 22871319), (22870150, 22871923), (22870150, 22870846), (22870150, 22871459), (22870294, 22871923)] 2021-10-25 09:35:44.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16885801, 16885966), (16886228, 16886317), (16886456, 16886528)] 2021-10-25 09:35:44.563 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16886317, 16886528, 'FBtr0074347_exon_1') contains intron (16886456, 16886528) 2021-10-25 09:35:44.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074347_exon_1'] 2021-10-25 09:35:44.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.570 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11037244, 11037395), (11037555, 11037621), (11038434, 11039617), (11039764, 11039997), (11040068, 11040421), (11040068, 11048861), (11040068, 11046177), (11040068, 11050291), (11040068, 11051261), (11040667, 11051261), (11046351, 11046493)] 2021-10-25 09:35:44.571 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11046177, 11046640, 'FBtr0310566_exon_1') contains intron (11046351, 11046493) 2021-10-25 09:35:44.572 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310566_exon_1'] 2021-10-25 09:35:44.572 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21312462, 21314423), (21312740, 21314423), (21312783, 21314423), (21313716, 21314423), (21313979, 21314423), (21314764, 21314827), (21315185, 21315235), (21316639, 21316696), (21317552, 21317608), (21317786, 21317846), (21318016, 21318080)] 2021-10-25 09:35:44.595 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21314423, 21315185, 'FBtr0300394_exon_2') contains intron (21314764, 21314827) 2021-10-25 09:35:44.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300394_exon_2'] 2021-10-25 09:35:44.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21871007, 21871981), (21871007, 21871971), (21872140, 21872409), (21872525, 21872587), (21872801, 21872871)] 2021-10-25 09:35:44.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030803: ['FBtr0074342', 'FBtr0310519'] 2021-10-25 09:35:44.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16887347, 16887622), (16887410, 16887622)] 2021-10-25 09:35:44.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.704 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051432: ['FBtr0082616'] 2021-10-25 09:35:44.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051432 has a single transcript. 2021-10-25 09:35:44.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051436: ['FBtr0084830'] 2021-10-25 09:35:44.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051436 has a single transcript. 2021-10-25 09:35:44.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051437: ['FBtr0084834'] 2021-10-25 09:35:44.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051437 has a single transcript. 2021-10-25 09:35:44.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051438: ['FBtr0084090'] 2021-10-25 09:35:44.754 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051438 has a single transcript. 2021-10-25 09:35:44.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051439: ['FBtr0084845'] 2021-10-25 09:35:44.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051439 has a single transcript. 2021-10-25 09:35:44.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030804: ['FBtr0074343'] 2021-10-25 09:35:44.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030804 has a single transcript. 2021-10-25 09:35:44.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051441: ['FBtr0082355', 'FBtr0339400'] 2021-10-25 09:35:44.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030805: ['FBtr0074418', 'FBtr0342974'] 2021-10-25 09:35:44.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11236488, 11236549), (11236492, 11236549), (11237340, 11237399)] 2021-10-25 09:35:44.811 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16939991, 16940503)] 2021-10-25 09:35:44.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034622: ['FBtr0300455'] 2021-10-25 09:35:44.853 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034622 has a single transcript. 2021-10-25 09:35:44.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038295: ['FBtr0110961', 'FBtr0306245', 'FBtr0334926'] 2021-10-25 09:35:44.865 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034623: ['FBtr0071612'] 2021-10-25 09:35:44.866 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034623 has a single transcript. 2021-10-25 09:35:44.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034624: ['FBtr0071611'] 2021-10-25 09:35:44.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034624 has a single transcript. 2021-10-25 09:35:44.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010350: ['FBtr0076688', 'FBtr0346546'] 2021-10-25 09:35:44.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034626: ['FBtr0071609'] 2021-10-25 09:35:44.881 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034626 has a single transcript. 2021-10-25 09:35:44.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030806: ['FBtr0074417'] 2021-10-25 09:35:44.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030806 has a single transcript. 2021-10-25 09:35:44.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051445: ['FBtr0085401', 'FBtr0332431'] 2021-10-25 09:35:44.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034627: ['FBtr0071608'] 2021-10-25 09:35:44.888 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034627 has a single transcript. 2021-10-25 09:35:44.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030807: ['FBtr0074416'] 2021-10-25 09:35:44.891 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030807 has a single transcript. 2021-10-25 09:35:44.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034628: ['FBtr0071606', 'FBtr0342891'] 2021-10-25 09:35:44.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030808: ['FBtr0110990', 'FBtr0290096'] 2021-10-25 09:35:44.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263777: ['FBtr0310577'] 2021-10-25 09:35:44.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263777 has a single transcript. 2021-10-25 09:35:44.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8127854, 8127928), (8128369, 8129083), (8129208, 8129451), (8129548, 8129613), (8129790, 8129851), (8130340, 8130424), (8130556, 8130620)] 2021-10-25 09:35:44.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.931 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29240999, 29241054), (29241575, 29241633), (29242183, 29242236), (29243094, 29243157), (29243313, 29243372), (29243850, 29244639), (29243850, 29244448)] 2021-10-25 09:35:44.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263778: ['FBtr0347241'] 2021-10-25 09:35:44.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263778 has a single transcript. 2021-10-25 09:35:44.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.938 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15150468, 15151864), (15152108, 15171633), (15171691, 15186021), (15186247, 15186312), (15186592, 15186646), (15186854, 15186918), (15187042, 15187097), (15187230, 15187357), (15187584, 15187646), (15187751, 15187821), (15187968, 15188025), (15188176, 15188230), (15189293, 15189344), (15189293, 15189365), (15189578, 15189639), (15189924, 15189997)] 2021-10-25 09:35:44.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263780: ['FBtr0300103', 'FBtr0334734'] 2021-10-25 09:35:44.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16943898, 16948853), (16949451, 16950984), (16949577, 16950984), (16953268, 16953327), (16953454, 16953513), (16954154, 16954385), (16954481, 16954535), (16954670, 16954746), (16955270, 16955328)] 2021-10-25 09:35:44.949 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21386823, 21386914), (21387077, 21387141), (21387434, 21387497), (21387903, 21387964), (21388577, 21388650), (21388806, 21388870)] 2021-10-25 09:35:44.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.950 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:44.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051446: ['FBtr0083163', 'FBtr0334026'] 2021-10-25 09:35:44.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1866303, 1866362), (1866562, 1866651), (1866809, 1866864), (1867050, 1926294), (1926681, 1926738), (1926863, 1995172), (1994898, 1995172), (1995361, 1995418), (1995551, 1995611), (1995906, 2053023), (2053291, 2053344), (2053618, 2118976), (2119244, 2261828), (2119244, 2245971), (2246006, 2261828)] 2021-10-25 09:35:44.996 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:44.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010352: ['FBtr0075268', 'FBtr0075269', 'FBtr0075263', 'FBtr0075264', 'FBtr0075266', 'FBtr0075267', 'FBtr0112860', 'FBtr0333214'] 2021-10-25 09:35:45.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15693270, 15693328), (15693783, 15693965), (15693783, 15693950)] 2021-10-25 09:35:45.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034629: ['FBtr0071607'] 2021-10-25 09:35:45.032 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034629 has a single transcript. 2021-10-25 09:35:45.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030809: ['FBtr0074415', 'FBtr0308839', 'FBtr0346190'] 2021-10-25 09:35:45.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034631: ['FBtr0071701'] 2021-10-25 09:35:45.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034631 has a single transcript. 2021-10-25 09:35:45.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034634: ['FBtr0071699', 'FBtr0071700'] 2021-10-25 09:35:45.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038296: ['FBtr0083029', 'FBtr0306246'] 2021-10-25 09:35:45.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263782: ['FBtr0084450'] 2021-10-25 09:35:45.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263782 has a single transcript. 2021-10-25 09:35:45.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263802: ['FBtr0309816'] 2021-10-25 09:35:45.091 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263802 has a single transcript. 2021-10-25 09:35:45.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051450: ['FBtr0081897'] 2021-10-25 09:35:45.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051450 has a single transcript. 2021-10-25 09:35:45.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263829: ['FBtr0112536'] 2021-10-25 09:35:45.099 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263829 has a single transcript. 2021-10-25 09:35:45.099 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21517921, 21517980), (21518397, 21518456), (21518870, 21518925), (21518870, 21518929)] 2021-10-25 09:35:45.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051451: ['FBtr0308922', 'FBtr0308923'] 2021-10-25 09:35:45.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263830: ['FBtr0111188', 'FBtr0343092'] 2021-10-25 09:35:45.117 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16958614, 16958676), (16960075, 16960143), (16960272, 16960339), (16960451, 16960511), (16961673, 16961740), (16962428, 16962492), (16962825, 16962931), (16963266, 16963702), (16963720, 16967494), (16967719, 16968509), (16967861, 16968509)] 2021-10-25 09:35:45.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.126 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15191625, 15191689), (15192296, 15192357), (15193008, 15193067), (15193181, 15193261), (15193671, 15193743), (15194059, 15194117), (15194400, 15194464), (15195205, 15195266), (15195412, 15195557), (15195804, 15195862)] 2021-10-25 09:35:45.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.127 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.147 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:45.148 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.154 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22959113, 22959389)] 2021-10-25 09:35:45.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034636: ['FBtr0071692', 'FBtr0308642'] 2021-10-25 09:35:45.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038299: ['FBtr0083140'] 2021-10-25 09:35:45.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038299 has a single transcript. 2021-10-25 09:35:45.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038300: ['FBtr0083048'] 2021-10-25 09:35:45.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038300 has a single transcript. 2021-10-25 09:35:45.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038301: ['FBtr0083139'] 2021-10-25 09:35:45.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038301 has a single transcript. 2021-10-25 09:35:45.219 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051453: ['FBtr0081898', 'FBtr0339330'] 2021-10-25 09:35:45.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038302: ['FBtr0083049'] 2021-10-25 09:35:45.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038302 has a single transcript. 2021-10-25 09:35:45.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038303: ['FBtr0083138'] 2021-10-25 09:35:45.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038303 has a single transcript. 2021-10-25 09:35:45.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038304: ['FBtr0083051'] 2021-10-25 09:35:45.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16955043, 16955327), (16955542, 16959098), (16955591, 16959098), (16955813, 16959098), (16957505, 16959098), (16957527, 16959098), (16959216, 16959284), (16959422, 16959704), (16959884, 16961499), (16959884, 16960537), (16960667, 16962334), (16961602, 16962334), (16962413, 16962475), (16962887, 16962942), (16963811, 16963869), (16964764, 16964823), (16964978, 16966067), (16964978, 16967381), (16966358, 16967381)] 2021-10-25 09:35:45.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038304 has a single transcript. 2021-10-25 09:35:45.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21561591, 21561793), (21562281, 21562543), (21562651, 21570761), (21570824, 21571416), (21570824, 21571109), (21571808, 21575981)] 2021-10-25 09:35:45.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.241 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038306: ['FBtr0083134', 'FBtr0083135'] 2021-10-25 09:35:45.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263831: ['FBtr0077176'] 2021-10-25 09:35:45.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263831 has a single transcript. 2021-10-25 09:35:45.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263832: ['FBtr0073202'] 2021-10-25 09:35:45.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263832 has a single transcript. 2021-10-25 09:35:45.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030812: ['FBtr0074412', 'FBtr0310524', 'FBtr0310525', 'FBtr0304839', 'FBtr0304840', 'FBtr0330596'] 2021-10-25 09:35:45.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263834: ['FBtr0321274'] 2021-10-25 09:35:45.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263834 has a single transcript. 2021-10-25 09:35:45.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263835: ['FBtr0321275'] 2021-10-25 09:35:45.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263835 has a single transcript. 2021-10-25 09:35:45.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8561129, 8561192), (8561556, 8561610)] 2021-10-25 09:35:45.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263838: ['FBtr0321273'] 2021-10-25 09:35:45.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263838 has a single transcript. 2021-10-25 09:35:45.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263839: ['FBtr0321280'] 2021-10-25 09:35:45.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263839 has a single transcript. 2021-10-25 09:35:45.301 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263841: ['FBtr0321302', 'FBtr0321303'] 2021-10-25 09:35:45.302 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15229179, 15229243)] 2021-10-25 09:35:45.303 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15227604, 15229408, 'FBtr0083135_exon_1') contains intron (15229179, 15229243) 2021-10-25 09:35:45.304 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083135_exon_1'] 2021-10-25 09:35:45.304 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034638: ['FBtr0071690', 'FBtr0071691', 'FBtr0344882'] 2021-10-25 09:35:45.352 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051454: ['FBtr0081870'] 2021-10-25 09:35:45.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051454 has a single transcript. 2021-10-25 09:35:45.353 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21298704, 21298788)] 2021-10-25 09:35:45.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.354 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051457: ['FBtr0084405'] 2021-10-25 09:35:45.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051457 has a single transcript. 2021-10-25 09:35:45.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051459: ['FBtr0083812'] 2021-10-25 09:35:45.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051459 has a single transcript. 2021-10-25 09:35:45.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038307: ['FBtr0083053', 'FBtr0083054'] 2021-10-25 09:35:45.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051460: ['FBtr0081873', 'FBtr0339327'] 2021-10-25 09:35:45.379 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21606193, 21606467), (21606360, 21606467), (21606617, 21606680), (21607342, 21607510)] 2021-10-25 09:35:45.381 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.381 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.410 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15229740, 15229800), (15230027, 15230096)] 2021-10-25 09:35:45.410 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15229701, 15230027, 'FBtr0083054_exon_1') contains intron (15229740, 15229800) 2021-10-25 09:35:45.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083054_exon_1'] 2021-10-25 09:35:45.411 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263842: ['FBtr0321298'] 2021-10-25 09:35:45.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263842 has a single transcript. 2021-10-25 09:35:45.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8562886, 8562942)] 2021-10-25 09:35:45.424 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263843: ['FBtr0321299'] 2021-10-25 09:35:45.425 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263843 has a single transcript. 2021-10-25 09:35:45.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.425 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17070431, 17070500), (17070622, 17070745), (17070628, 17070733), (17070628, 17070745), (17070915, 17070986), (17071447, 17071509), (17071748, 17071817), (17072233, 17072292), (17072388, 17072453), (17072539, 17072648), (17072724, 17072789), (17072864, 17072945), (17073197, 17073262), (17073611, 17074794), (17073611, 17075952), (17075989, 17076924), (17077440, 17077680), (17077467, 17077680)] 2021-10-25 09:35:45.427 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.427 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263844: ['FBtr0321301'] 2021-10-25 09:35:45.433 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263844 has a single transcript. 2021-10-25 09:35:45.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263845: ['FBtr0321300'] 2021-10-25 09:35:45.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263845 has a single transcript. 2021-10-25 09:35:45.449 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074412': ['FBtr0330596']} 2021-10-25 09:35:45.449 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330596']] 2021-10-25 09:35:45.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263846: ['FBtr0330223', 'FBtr0321304', 'FBtr0321305', 'FBtr0321306', 'FBtr0321307', 'FBtr0321308', 'FBtr0321309'] 2021-10-25 09:35:45.482 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038309: ['FBtr0113238'] 2021-10-25 09:35:45.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038309 has a single transcript. 2021-10-25 09:35:45.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051463: ['FBtr0081831'] 2021-10-25 09:35:45.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051463 has a single transcript. 2021-10-25 09:35:45.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038311: ['FBtr0083128', 'FBtr0110811'] 2021-10-25 09:35:45.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051464: ['FBtr0306804'] 2021-10-25 09:35:45.502 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051464 has a single transcript. 2021-10-25 09:35:45.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034639: ['FBtr0342900'] 2021-10-25 09:35:45.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034639 has a single transcript. 2021-10-25 09:35:45.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051465: ['FBtr0084147', 'FBtr0334876', 'FBtr0334877'] 2021-10-25 09:35:45.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034641: ['FBtr0071658', 'FBtr0304728'] 2021-10-25 09:35:45.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15268342, 15268470)] 2021-10-25 09:35:45.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.566 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21625605, 21625664), (21625815, 21625937), (21626756, 21626815), (21627088, 21627153), (21629277, 21629345), (21629466, 21629530), (21629628, 21629690), (21630053, 21630486), (21630547, 21630605), (21630815, 21630872)] 2021-10-25 09:35:45.568 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.568 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.577 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21882882, 21882944), (21882882, 21882940), (21883171, 21883228), (21883171, 21883215)] 2021-10-25 09:35:45.578 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010355: ['FBtr0081684', 'FBtr0081685', 'FBtr0081686', 'FBtr0301622', 'FBtr0304903', 'FBtr0345257'] 2021-10-25 09:35:45.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038312: ['FBtr0290018'] 2021-10-25 09:35:45.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038312 has a single transcript. 2021-10-25 09:35:45.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038313: ['FBtr0083066'] 2021-10-25 09:35:45.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038313 has a single transcript. 2021-10-25 09:35:45.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034642: ['FBtr0071659', 'FBtr0342954'] 2021-10-25 09:35:45.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030813: ['FBtr0074381', 'FBtr0343333'] 2021-10-25 09:35:45.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038315: ['FBtr0083081', 'FBtr0273405'] 2021-10-25 09:35:45.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3757955, 3758042), (3758089, 3758538), (3758676, 3758737), (3758919, 3758980), (3759154, 3760067), (3759806, 3760067), (3760148, 3760206), (3760517, 3760692), (3760553, 3760692), (3761014, 3761093), (3762564, 3762617), (3762856, 3763026), (3763151, 3763648), (3763205, 3763648), (3765054, 3765169), (3765359, 3766376), (3765359, 3765908), (3766043, 3766936), (3766043, 3766376), (3766460, 3766570), (3766696, 3766936), (3767349, 3767414), (3767620, 3767688), (3767852, 3767935), (3768077, 3768139)] 2021-10-25 09:35:45.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21632474, 21632964), (21633309, 21633366)] 2021-10-25 09:35:45.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15316821, 15316893), (15317438, 15317494)] 2021-10-25 09:35:45.717 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15316470, 15317438, 'FBtr0083081_exon_1') contains intron (15316821, 15316893) 2021-10-25 09:35:45.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083081_exon_1'] 2021-10-25 09:35:45.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17079008, 17079067)] 2021-10-25 09:35:45.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0051467: ['FBtr0082320'] 2021-10-25 09:35:45.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0051467 has a single transcript. 2021-10-25 09:35:45.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038316: ['FBtr0083123'] 2021-10-25 09:35:45.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038316 has a single transcript. 2021-10-25 09:35:45.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030814: ['FBtr0074382'] 2021-10-25 09:35:45.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030814 has a single transcript. 2021-10-25 09:35:45.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034643: ['FBtr0071660', 'FBtr0330228'] 2021-10-25 09:35:45.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038318: ['FBtr0083121', 'FBtr0083122'] 2021-10-25 09:35:45.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030815: ['FBtr0074411'] 2021-10-25 09:35:45.792 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030815 has a single transcript. 2021-10-25 09:35:45.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6647171, 6647293), (6647601, 6647793), (6647601, 6647664), (6647928, 6647982), (6648194, 6648259), (6648885, 6648944), (6649325, 6649380), (6650095, 6650152), (6650425, 6650498), (6650720, 6650790), (6652678, 6652749), (6652892, 6652959), (6653290, 6654469), (6653290, 6654022), (6654121, 6654469), (6654664, 6654988), (6654664, 6655208), (6654664, 6654985), (6655081, 6655208)] 2021-10-25 09:35:45.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030816: ['FBtr0074383'] 2021-10-25 09:35:45.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030816 has a single transcript. 2021-10-25 09:35:45.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030817: ['FBtr0074384', 'FBtr0074385', 'FBtr0340358', 'FBtr0334460', 'FBtr0334461'] 2021-10-25 09:35:45.828 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15325853, 15325930), (15326235, 15326291), (15326652, 15326709), (15327313, 15327375), (15327563, 15327629), (15327780, 15327926), (15328062, 15328154), (15328062, 15328127)] 2021-10-25 09:35:45.830 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.830 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21634981, 21635380)] 2021-10-25 09:35:45.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.838 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.845 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071660': ['FBtr0330228']} 2021-10-25 09:35:45.845 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330228']] 2021-10-25 09:35:45.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034644: ['FBtr0071661', 'FBtr0071662'] 2021-10-25 09:35:45.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21646491, 21650110), (21650792, 21652436), (21652563, 21654774), (21654063, 21654774), (21654907, 21654969), (21655046, 21655120), (21655502, 21655591), (21656307, 21656366)] 2021-10-25 09:35:45.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038319: ['FBtr0083084'] 2021-10-25 09:35:45.900 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038319 has a single transcript. 2021-10-25 09:35:45.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038320: ['FBtr0083085'] 2021-10-25 09:35:45.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038320 has a single transcript. 2021-10-25 09:35:45.916 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038321: ['FBtr0083119', 'FBtr0334590'] 2021-10-25 09:35:45.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17092131, 17102396), (17101385, 17102399), (17101385, 17102396), (17102321, 17102396), (17103400, 17103508), (17103684, 17103843)] 2021-10-25 09:35:45.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.948 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.961 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15339167, 15339359), (15339585, 15339678), (15339889, 15342288), (15342393, 15342967)] 2021-10-25 09:35:45.962 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:45.962 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:45.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034645: ['FBtr0071663', 'FBtr0113101', 'FBtr0113102', 'FBtr0300679', 'FBtr0300680'] 2021-10-25 09:35:46.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263847: ['FBtr0452214'] 2021-10-25 09:35:46.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263847 has a single transcript. 2021-10-25 09:35:46.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263848: ['FBtr0321317'] 2021-10-25 09:35:46.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263848 has a single transcript. 2021-10-25 09:35:46.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263849: ['FBtr0321316'] 2021-10-25 09:35:46.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263849 has a single transcript. 2021-10-25 09:35:46.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263850: ['FBtr0321315'] 2021-10-25 09:35:46.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263850 has a single transcript. 2021-10-25 09:35:46.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038324: ['FBtr0083089'] 2021-10-25 09:35:46.030 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038324 has a single transcript. 2021-10-25 09:35:46.037 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263851: ['FBtr0321323'] 2021-10-25 09:35:46.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263851 has a single transcript. 2021-10-25 09:35:46.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038325: ['FBtr0083115'] 2021-10-25 09:35:46.040 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038325 has a single transcript. 2021-10-25 09:35:46.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263852: ['FBtr0079719'] 2021-10-25 09:35:46.045 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263852 has a single transcript. 2021-10-25 09:35:46.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038326: ['FBtr0083090', 'FBtr0083091'] 2021-10-25 09:35:46.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263855: ['FBtr0086032'] 2021-10-25 09:35:46.054 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263855 has a single transcript. 2021-10-25 09:35:46.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263863: ['FBtr0084272'] 2021-10-25 09:35:46.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263863 has a single transcript. 2021-10-25 09:35:46.071 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263864: ['FBtr0086968', 'FBtr0086967'] 2021-10-25 09:35:46.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010356: ['FBtr0088240'] 2021-10-25 09:35:46.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010356 has a single transcript. 2021-10-25 09:35:46.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010357: ['FBtr0088122', 'FBtr0345928'] 2021-10-25 09:35:46.096 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15357320, 15357392), (15357320, 15357389), (15358274, 15358538)] 2021-10-25 09:35:46.097 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.097 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.124 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21658109, 21658345), (21658109, 21658350), (21658275, 21658345), (21658275, 21658350), (21658480, 21658539)] 2021-10-25 09:35:46.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17020241, 17021389), (17021790, 17021911), (17022549, 17022602), (17022726, 17022789), (17022980, 17023084), (17023329, 17023388), (17023578, 17023697), (17025291, 17025358), (17025478, 17025533), (17025680, 17025744)] 2021-10-25 09:35:46.127 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17023084, 17023578, 'FBtr0086967_exon_6') contains intron (17023329, 17023388) 2021-10-25 09:35:46.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086967_exon_6'] 2021-10-25 09:35:46.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:46.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038327: ['FBtr0083093', 'FBtr0347564'] 2021-10-25 09:35:46.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030823: ['FBtr0074403'] 2021-10-25 09:35:46.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030823 has a single transcript. 2021-10-25 09:35:46.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030824: ['FBtr0074389'] 2021-10-25 09:35:46.167 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030824 has a single transcript. 2021-10-25 09:35:46.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030826: ['FBtr0074402'] 2021-10-25 09:35:46.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030826 has a single transcript. 2021-10-25 09:35:46.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030828: ['FBtr0074393', 'FBtr0340616'] 2021-10-25 09:35:46.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263866: ['FBtr0329835'] 2021-10-25 09:35:46.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263866 has a single transcript. 2021-10-25 09:35:46.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15362537, 15362587)] 2021-10-25 09:35:46.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.205 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010358: ['FBtr0088124'] 2021-10-25 09:35:46.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010358 has a single transcript. 2021-10-25 09:35:46.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263867: ['FBtr0329836'] 2021-10-25 09:35:46.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263867 has a single transcript. 2021-10-25 09:35:46.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010359: ['FBtr0088159'] 2021-10-25 09:35:46.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010359 has a single transcript. 2021-10-25 09:35:46.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263868: ['FBtr0343259'] 2021-10-25 09:35:46.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263868 has a single transcript. 2021-10-25 09:35:46.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263869: ['FBtr0329834'] 2021-10-25 09:35:46.229 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263869 has a single transcript. 2021-10-25 09:35:46.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010379: ['FBtr0083226', 'FBtr0083227', 'FBtr0083228', 'FBtr0344470', 'FBtr0344717'] 2021-10-25 09:35:46.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263870: ['FBtr0329833'] 2021-10-25 09:35:46.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263870 has a single transcript. 2021-10-25 09:35:46.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17215570, 17215735), (17215995, 17216359)] 2021-10-25 09:35:46.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263871: ['FBtr0329831'] 2021-10-25 09:35:46.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263871 has a single transcript. 2021-10-25 09:35:46.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263872: ['FBtr0344144', 'FBtr0329830'] 2021-10-25 09:35:46.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038330: ['FBtr0083109'] 2021-10-25 09:35:46.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038330 has a single transcript. 2021-10-25 09:35:46.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038331: ['FBtr0083094'] 2021-10-25 09:35:46.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038331 has a single transcript. 2021-10-25 09:35:46.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038332: ['FBtr0303235', 'FBtr0303236', 'FBtr0332540'] 2021-10-25 09:35:46.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(308842, 308996)] 2021-10-25 09:35:46.298 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (308536, 309348, 'FBtr0344144_exon_1') contains intron (308842, 308996) 2021-10-25 09:35:46.299 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344144_exon_1'] 2021-10-25 09:35:46.299 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030829: ['FBtr0074394', 'FBtr0346183'] 2021-10-25 09:35:46.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034646: ['FBtr0071683'] 2021-10-25 09:35:46.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034646 has a single transcript. 2021-10-25 09:35:46.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034647: ['FBtr0071682', 'FBtr0345682'] 2021-10-25 09:35:46.352 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16099595, 16100899), (16099660, 16100899), (16100779, 16100899), (16101726, 16101794), (16101992, 16102057), (16102447, 16102510), (16102744, 16102812), (16102959, 16103030)] 2021-10-25 09:35:46.353 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.353 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:46.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.354 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.362 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15370263, 15370318), (15370566, 15370617)] 2021-10-25 09:35:46.363 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15370035, 15372212, 'FBtr0303236_exon_1') contains intron (15370263, 15370318) 2021-10-25 09:35:46.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303236_exon_1'] 2021-10-25 09:35:46.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21662504, 21662687)] 2021-10-25 09:35:46.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.370 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083226': ['FBtr0083228']} 2021-10-25 09:35:46.371 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0083228']] 2021-10-25 09:35:46.374 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263873: ['FBtr0344856', 'FBtr0329838', 'FBtr0329839', 'FBtr0329840', 'FBtr0329842', 'FBtr0329843', 'FBtr0329844', 'FBtr0329845', 'FBtr0329846', 'FBtr0332236', 'FBtr0332237', 'FBtr0336736'] 2021-10-25 09:35:46.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030830: ['FBtr0114539', 'FBtr0114540'] 2021-10-25 09:35:46.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034649: ['FBtr0071680', 'FBtr0071681'] 2021-10-25 09:35:46.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17221772, 17222125), (17222176, 17222502), (17222209, 17222278)] 2021-10-25 09:35:46.458 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.458 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038334: ['FBtr0083107'] 2021-10-25 09:35:46.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038334 has a single transcript. 2021-10-25 09:35:46.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038337: ['FBtr0083105', 'FBtr0083106', 'FBtr0346109'] 2021-10-25 09:35:46.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21669480, 21669536), (21669693, 21669754)] 2021-10-25 09:35:46.490 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21669536, 21669916, 'FBtr0071681_exon_1') contains intron (21669693, 21669754) 2021-10-25 09:35:46.491 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071681_exon_1'] 2021-10-25 09:35:46.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010380: ['FBtr0074789'] 2021-10-25 09:35:46.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010380 has a single transcript. 2021-10-25 09:35:46.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010382: ['FBtr0080775', 'FBtr0080774', 'FBtr0080773', 'FBtr0080776', 'FBtr0080777', 'FBtr0305561'] 2021-10-25 09:35:46.529 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030832: ['FBtr0273221'] 2021-10-25 09:35:46.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030832 has a single transcript. 2021-10-25 09:35:46.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030833: ['FBtr0074447', 'FBtr0339780'] 2021-10-25 09:35:46.562 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034650: ['FBtr0071666'] 2021-10-25 09:35:46.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034650 has a single transcript. 2021-10-25 09:35:46.567 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15403382, 15403438), (15403624, 15403685), (15403948, 15404019), (15404356, 15404641), (15405306, 15406900), (15405306, 15405379)] 2021-10-25 09:35:46.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.576 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034651: ['FBtr0071668', 'FBtr0342957'] 2021-10-25 09:35:46.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17243862, 17243923), (17244131, 17244233)] 2021-10-25 09:35:46.588 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.588 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:46.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030834: ['FBtr0074446'] 2021-10-25 09:35:46.648 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030834 has a single transcript. 2021-10-25 09:35:46.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030836: ['FBtr0074445', 'FBtr0339779'] 2021-10-25 09:35:46.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19796823, 19807344), (19807585, 19857669), (19828878, 19857669), (19828878, 19845376), (19845543, 19857669), (19850398, 19856063), (19856258, 19857669), (19857840, 19886943), (19866509, 19886943), (19887320, 19907761), (19896207, 19901965), (19896323, 19901965), (19902187, 19907761), (19907892, 19908758), (19908867, 19908938), (19910432, 19925382), (19918585, 19925382), (19925942, 19926006), (19926151, 19926209), (19926512, 19928622), (19926512, 19926620), (19926647, 19928622), (19928996, 19929202), (19929354, 19954552), (19935527, 19945168), (19935527, 19945269), (19946702, 19954552), (19956399, 19956470), (19956726, 19956791), (19957271, 19957332)] 2021-10-25 09:35:46.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15729156, 15729273), (15729499, 15729565), (15730836, 15731001), (15730836, 15737627), (15737964, 15746454), (15737964, 15740771), (15740899, 15745391), (15740899, 15747985), (15740899, 15746454), (15740899, 15747832), (15745643, 15746454)] 2021-10-25 09:35:46.666 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.666 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034654: ['FBtr0071670'] 2021-10-25 09:35:46.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034654 has a single transcript. 2021-10-25 09:35:46.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038339: ['FBtr0113239', 'FBtr0113240', 'FBtr0334631'] 2021-10-25 09:35:46.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034655: ['FBtr0071671', 'FBtr0345486'] 2021-10-25 09:35:46.713 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17282389, 17282627)] 2021-10-25 09:35:46.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.714 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21689222, 21689283), (21689868, 21689926)] 2021-10-25 09:35:46.747 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.747 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030837: ['FBtr0074444'] 2021-10-25 09:35:46.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030837 has a single transcript. 2021-10-25 09:35:46.773 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15423543, 15423672), (15423546, 15423672), (15423882, 15423960), (15425101, 15425160), (15425254, 15434117), (15425254, 15426740)] 2021-10-25 09:35:46.775 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.775 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030838: ['FBtr0074425', 'FBtr0074427', 'FBtr0074428', 'FBtr0339777', 'FBtr0339778'] 2021-10-25 09:35:46.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034657: ['FBtr0071711', 'FBtr0071712', 'FBtr0071713'] 2021-10-25 09:35:46.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17282844, 17282903), (17282975, 17302838), (17302507, 17302838), (17302583, 17302838), (17302786, 17302838), (17303390, 17304074), (17304370, 17304697)] 2021-10-25 09:35:46.897 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17302469, 17303390, 'FBtr0074428_exon_1') contains intron (17302507, 17302838) 2021-10-25 09:35:46.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074428_exon_1'] 2021-10-25 09:35:46.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038341: ['FBtr0083160', 'FBtr0339398', 'FBtr0334629'] 2021-10-25 09:35:46.913 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21720617, 21720947), (21720874, 21720947), (21721327, 21721857)] 2021-10-25 09:35:46.914 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21720733, 21721327, 'FBtr0071713_exon_1') contains intron (21720874, 21720947) 2021-10-25 09:35:46.914 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071713_exon_1'] 2021-10-25 09:35:46.914 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:46.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010383: ['FBtr0074609', 'FBtr0074610'] 2021-10-25 09:35:46.974 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15443337, 15443403), (15444123, 15444184), (15444553, 15444611), (15444785, 15444841), (15445006, 15445070), (15445272, 15445339), (15445620, 15445680), (15445904, 15446720), (15446858, 15446981), (15447152, 15447223), (15447804, 15447869), (15448028, 15448103), (15448253, 15448314), (15448835, 15448974), (15449276, 15449336), (15449745, 15463003), (15449745, 15474886), (15449745, 15460807)] 2021-10-25 09:35:46.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:46.977 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.004 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18689554, 18689990), (18690255, 18690358), (18690788, 18690865), (18690987, 18691827)] 2021-10-25 09:35:47.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034658: ['FBtr0071714'] 2021-10-25 09:35:47.027 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034658 has a single transcript. 2021-10-25 09:35:47.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034659: ['FBtr0071716'] 2021-10-25 09:35:47.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034659 has a single transcript. 2021-10-25 09:35:47.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034660: ['FBtr0071745'] 2021-10-25 09:35:47.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034660 has a single transcript. 2021-10-25 09:35:47.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034661: ['FBtr0071743'] 2021-10-25 09:35:47.055 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034661 has a single transcript. 2021-10-25 09:35:47.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034662: ['FBtr0302446'] 2021-10-25 09:35:47.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034662 has a single transcript. 2021-10-25 09:35:47.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010385: ['FBtr0088432'] 2021-10-25 09:35:47.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010385 has a single transcript. 2021-10-25 09:35:47.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034663: ['FBtr0071740'] 2021-10-25 09:35:47.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034663 has a single transcript. 2021-10-25 09:35:47.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010387: ['FBtr0076916', 'FBtr0076915'] 2021-10-25 09:35:47.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034664: ['FBtr0071739'] 2021-10-25 09:35:47.081 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034664 has a single transcript. 2021-10-25 09:35:47.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034665: ['FBtr0071738'] 2021-10-25 09:35:47.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034665 has a single transcript. 2021-10-25 09:35:47.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034666: ['FBtr0071720'] 2021-10-25 09:35:47.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034666 has a single transcript. 2021-10-25 09:35:47.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034667: ['FBtr0071735'] 2021-10-25 09:35:47.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034667 has a single transcript. 2021-10-25 09:35:47.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030839: ['FBtr0074431', 'FBtr0074432'] 2021-10-25 09:35:47.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038342: ['FBtr0083145'] 2021-10-25 09:35:47.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038342 has a single transcript. 2021-10-25 09:35:47.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038343: ['FBtr0300174'] 2021-10-25 09:35:47.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038343 has a single transcript. 2021-10-25 09:35:47.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034670: ['FBtr0071723', 'FBtr0342977', 'FBtr0308748'] 2021-10-25 09:35:47.122 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7131908, 7132648), (7132677, 7133118)] 2021-10-25 09:35:47.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038344: ['FBtr0083147'] 2021-10-25 09:35:47.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038344 has a single transcript. 2021-10-25 09:35:47.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038345: ['FBtr0083148'] 2021-10-25 09:35:47.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038345 has a single transcript. 2021-10-25 09:35:47.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038348: ['FBtr0345258'] 2021-10-25 09:35:47.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038348 has a single transcript. 2021-10-25 09:35:47.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038349: ['FBtr0083151', 'FBtr0433535'] 2021-10-25 09:35:47.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17423856, 17426095), (17426333, 17426599), (17426917, 17427419)] 2021-10-25 09:35:47.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010388: ['FBtr0087436', 'FBtr0309055'] 2021-10-25 09:35:47.191 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15543669, 15543728), (15544437, 15544496), (15545588, 15545643), (15545877, 15545934), (15546669, 15546728), (15546883, 15547354), (15547458, 15547524), (15547916, 15547969)] 2021-10-25 09:35:47.192 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.192 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21951662, 21951843), (21951770, 21951843)] 2021-10-25 09:35:47.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.227 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:47.228 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030840: ['FBtr0074437'] 2021-10-25 09:35:47.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030840 has a single transcript. 2021-10-25 09:35:47.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030841: ['FBtr0074436'] 2021-10-25 09:35:47.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030841 has a single transcript. 2021-10-25 09:35:47.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030844: ['FBtr0074491', 'FBtr0100574', 'FBtr0112998', 'FBtr0329827'] 2021-10-25 09:35:47.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038350: ['FBtr0083150'] 2021-10-25 09:35:47.268 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038350 has a single transcript. 2021-10-25 09:35:47.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038353: ['FBtr0083164', 'FBtr0334027'] 2021-10-25 09:35:47.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263874: ['FBtr0329848'] 2021-10-25 09:35:47.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263874 has a single transcript. 2021-10-25 09:35:47.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263911: ['FBtr0333464', 'FBtr0078382'] 2021-10-25 09:35:47.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034671: ['FBtr0071733'] 2021-10-25 09:35:47.308 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034671 has a single transcript. 2021-10-25 09:35:47.308 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010389: ['FBtr0083548', 'FBtr0083549', 'FBtr0083550'] 2021-10-25 09:35:47.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034674: ['FBtr0071726', 'FBtr0345537'] 2021-10-25 09:35:47.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15695465, 15695748), (15696185, 15696258)] 2021-10-25 09:35:47.324 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21539167, 21539243)] 2021-10-25 09:35:47.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21973870, 21974173), (21974750, 21974803), (21974874, 21974938), (21975228, 21975288)] 2021-10-25 09:35:47.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.372 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17566969, 17567037), (17567226, 17567286), (17567497, 17567566), (17567705, 17567780), (17568063, 17568177), (17568259, 17568327), (17568627, 17568758)] 2021-10-25 09:35:47.374 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17567566, 17568063, 'FBtr0100574_exon_4') contains intron (17567705, 17567780) 2021-10-25 09:35:47.375 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17567566, 17568063, 'FBtr0112998_exon_4') contains intron (17567705, 17567780) 2021-10-25 09:35:47.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100574_exon_4', 'FBtr0112998_exon_4'] 2021-10-25 09:35:47.376 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038354: ['FBtr0083165'] 2021-10-25 09:35:47.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038354 has a single transcript. 2021-10-25 09:35:47.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038355: ['FBtr0083167', 'FBtr0344379'] 2021-10-25 09:35:47.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18048570, 18049110), (18048570, 18049229), (18048570, 18052501)] 2021-10-25 09:35:47.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15745081, 15745171), (15745494, 15745551), (15745776, 15745828), (15746045, 15746105)] 2021-10-25 09:35:47.432 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.432 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.437 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034681: ['FBtr0071749'] 2021-10-25 09:35:47.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034681 has a single transcript. 2021-10-25 09:35:47.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263916: ['FBtr0343158', 'FBtr0079290'] 2021-10-25 09:35:47.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034683: ['FBtr0071805'] 2021-10-25 09:35:47.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034683 has a single transcript. 2021-10-25 09:35:47.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034684: ['FBtr0071804', 'FBtr0345871'] 2021-10-25 09:35:47.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038356: ['FBtr0083169'] 2021-10-25 09:35:47.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038356 has a single transcript. 2021-10-25 09:35:47.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038357: ['FBtr0083197'] 2021-10-25 09:35:47.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038357 has a single transcript. 2021-10-25 09:35:47.505 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22059859, 22059911), (22060061, 22060111), (22060194, 22060258), (22060505, 22060563), (22060648, 22061408)] 2021-10-25 09:35:47.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:47.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.506 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038358: ['FBtr0083170'] 2021-10-25 09:35:47.512 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038358 has a single transcript. 2021-10-25 09:35:47.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038359: ['FBtr0083171'] 2021-10-25 09:35:47.519 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038359 has a single transcript. 2021-10-25 09:35:47.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038360: ['FBtr0083172'] 2021-10-25 09:35:47.527 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038360 has a single transcript. 2021-10-25 09:35:47.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010391: ['FBtr0073480'] 2021-10-25 09:35:47.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010391 has a single transcript. 2021-10-25 09:35:47.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038361: ['FBtr0083173'] 2021-10-25 09:35:47.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038361 has a single transcript. 2021-10-25 09:35:47.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010395: ['FBtr0081461', 'FBtr0346711'] 2021-10-25 09:35:47.542 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038363: ['FBtr0083174', 'FBtr0334591'] 2021-10-25 09:35:47.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030846: ['FBtr0300778', 'FBtr0335252', 'FBtr0335253', 'FBtr0335254'] 2021-10-25 09:35:47.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034687: ['FBtr0071803'] 2021-10-25 09:35:47.581 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034687 has a single transcript. 2021-10-25 09:35:47.582 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21053221, 21053284), (21053361, 21053457), (21053644, 21054993), (21055744, 21055802), (21055998, 21056104)] 2021-10-25 09:35:47.583 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263929: ['FBtr0305694', 'FBtr0305689', 'FBtr0305692', 'FBtr0305690', 'FBtr0305695', 'FBtr0305693', 'FBtr0305691'] 2021-10-25 09:35:47.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034688: ['FBtr0071802', 'FBtr0303766'] 2021-10-25 09:35:47.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15792901, 15792956), (15792973, 15793041), (15793151, 15793209)] 2021-10-25 09:35:47.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010397: ['FBtr0087512', 'FBtr0333166'] 2021-10-25 09:35:47.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22071707, 22071765), (22072632, 22072797), (22072894, 22072961), (22073067, 22073211)] 2021-10-25 09:35:47.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038365: ['FBtr0307203'] 2021-10-25 09:35:47.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038365 has a single transcript. 2021-10-25 09:35:47.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17588930, 17588987), (17589095, 17589957), (17589095, 17590011), (17589095, 17590014), (17590468, 17590516), (17590468, 17590525)] 2021-10-25 09:35:47.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038366: ['FBtr0083180'] 2021-10-25 09:35:47.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038366 has a single transcript. 2021-10-25 09:35:47.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038369: ['FBtr0300570', 'FBtr0334594'] 2021-10-25 09:35:47.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14571311, 14571459), (14571311, 14571376), (14572182, 14572252), (14572847, 14575224)] 2021-10-25 09:35:47.701 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.701 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.730 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15834771, 15834912), (15835086, 15835196)] 2021-10-25 09:35:47.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.731 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034689: ['FBtr0071800'] 2021-10-25 09:35:47.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034689 has a single transcript. 2021-10-25 09:35:47.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034691: ['FBtr0071756', 'FBtr0071757', 'FBtr0308239'] 2021-10-25 09:35:47.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010398: ['FBtr0080092', 'FBtr0331671'] 2021-10-25 09:35:47.782 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14742591, 14788056), (14749616, 14750205), (14750273, 14788056), (14750273, 14784925), (14785442, 14788056), (14787999, 14788056), (14788619, 14788698), (14788619, 14788695), (14788966, 14789025), (14789495, 14789556), (14791252, 14793442), (14791252, 14794528), (14793888, 14794528)] 2021-10-25 09:35:47.783 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14789556, 14793735, 'FBtr0305694_exon_5') contains intron (14791252, 14793442) 2021-10-25 09:35:47.784 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14793442, 14795868, 'FBtr0305690_exon_6') contains intron (14793888, 14794528) 2021-10-25 09:35:47.786 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305694_exon_5', 'FBtr0305690_exon_6'] 2021-10-25 09:35:47.786 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038371: ['FBtr0083190'] 2021-10-25 09:35:47.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038371 has a single transcript. 2021-10-25 09:35:47.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10517998, 10518059)] 2021-10-25 09:35:47.811 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038373: ['FBtr0083184'] 2021-10-25 09:35:47.817 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038373 has a single transcript. 2021-10-25 09:35:47.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038376: ['FBtr0083188'] 2021-10-25 09:35:47.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038376 has a single transcript. 2021-10-25 09:35:47.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030847: ['FBtr0074448', 'FBtr0074449', 'FBtr0335248', 'FBtr0335249', 'FBtr0335250', 'FBtr0335251'] 2021-10-25 09:35:47.831 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22080205, 22081074), (22080538, 22081074), (22080763, 22081074), (22082637, 22082704), (22084924, 22084991)] 2021-10-25 09:35:47.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038377: ['FBtr0083185', 'FBtr0083186'] 2021-10-25 09:35:47.833 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15860607, 15860775)] 2021-10-25 09:35:47.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010399: ['FBtr0078763'] 2021-10-25 09:35:47.885 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15860195, 15861478, 'FBtr0083185_exon_1') contains intron (15860607, 15860775) 2021-10-25 09:35:47.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010399 has a single transcript. 2021-10-25 09:35:47.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083185_exon_1'] 2021-10-25 09:35:47.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010401: ['FBtr0300320', 'FBtr0300321', 'FBtr0331341'] 2021-10-25 09:35:47.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034692: ['FBtr0071799', 'FBtr0308241'] 2021-10-25 09:35:47.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038380: ['FBtr0083249'] 2021-10-25 09:35:47.966 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038380 has a single transcript. 2021-10-25 09:35:47.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038381: ['FBtr0083200'] 2021-10-25 09:35:47.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038381 has a single transcript. 2021-10-25 09:35:47.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7979064, 7979116), (7979294, 7979348), (7979294, 7979360)] 2021-10-25 09:35:47.978 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7979116, 7979614, 'FBtr0300320_exon_2') contains intron (7979294, 7979348) 2021-10-25 09:35:47.979 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300320_exon_2'] 2021-10-25 09:35:47.980 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:47.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038385: ['FBtr0083201'] 2021-10-25 09:35:47.984 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038385 has a single transcript. 2021-10-25 09:35:47.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038386: ['FBtr0083242'] 2021-10-25 09:35:47.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038386 has a single transcript. 2021-10-25 09:35:47.992 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17580097, 17588987), (17580097, 17596656), (17587077, 17588987), (17589095, 17596656), (17596751, 17596809), (17597320, 17597385), (17597320, 17597397), (17597926, 17598010), (17598184, 17598246), (17598184, 17598267), (17598190, 17598267)] 2021-10-25 09:35:47.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:47.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038387: ['FBtr0083203', 'FBtr0345214'] 2021-10-25 09:35:48.005 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22086566, 22086728), (22086566, 22088450)] 2021-10-25 09:35:48.006 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.050 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15933932, 15934002), (15933932, 15933999), (15934314, 15934374)] 2021-10-25 09:35:48.051 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034693: ['FBtr0071797', 'FBtr0336636', 'FBtr0300693', 'FBtr0336637', 'FBtr0336638'] 2021-10-25 09:35:48.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010403: ['FBtr0078655'] 2021-10-25 09:35:48.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010403 has a single transcript. 2021-10-25 09:35:48.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263930: ['FBtr0076583', 'FBtr0305901'] 2021-10-25 09:35:48.100 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010406: ['FBtr0076752'] 2021-10-25 09:35:48.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010406 has a single transcript. 2021-10-25 09:35:48.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010407: ['FBtr0079978'] 2021-10-25 09:35:48.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010407 has a single transcript. 2021-10-25 09:35:48.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038388: ['FBtr0083240', 'FBtr0301716'] 2021-10-25 09:35:48.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010408: ['FBtr0076423', 'FBtr0076424', 'FBtr0076425', 'FBtr0342577'] 2021-10-25 09:35:48.141 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8828503, 8877157), (8877301, 8886274), (8886398, 8886496), (8886970, 8887096), (8887286, 8887958), (8888134, 8888651), (8888859, 8888923), (8889062, 8889163)] 2021-10-25 09:35:48.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15963541, 15963598), (15963545, 15963598)] 2021-10-25 09:35:48.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.198 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22092059, 22092141), (22092062, 22092141), (22092273, 22094523), (22092717, 22094523), (22094043, 22098981), (22094043, 22094523), (22094787, 22098981)] 2021-10-25 09:35:48.199 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22092141, 22094787, 'FBtr0071797_exon_2') contains intron (22092273, 22094523) 2021-10-25 09:35:48.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071797_exon_2'] 2021-10-25 09:35:48.201 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038389: ['FBtr0083212', 'FBtr0302549'] 2021-10-25 09:35:48.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9510158, 9510464), (9510158, 9510281), (9510651, 9511055), (9511301, 9511499)] 2021-10-25 09:35:48.215 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.215 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263933: ['FBtr0078055'] 2021-10-25 09:35:48.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263933 has a single transcript. 2021-10-25 09:35:48.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263934: ['FBtr0329856', 'FBtr0329857', 'FBtr0329858', 'FBtr0329859'] 2021-10-25 09:35:48.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030850: ['FBtr0074487', 'FBtr0290036'] 2021-10-25 09:35:48.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15963897, 15963975), (15964097, 15964164)] 2021-10-25 09:35:48.254 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15963883, 15964097, 'FBtr0083212_exon_1') contains intron (15963897, 15963975) 2021-10-25 09:35:48.255 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083212_exon_1'] 2021-10-25 09:35:48.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.285 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17624205, 17625529), (17625658, 17626939), (17627240, 17627428)] 2021-10-25 09:35:48.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038390: ['FBtr0083213'] 2021-10-25 09:35:48.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038390 has a single transcript. 2021-10-25 09:35:48.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7087080, 7105547), (7099012, 7105547), (7105611, 7118416), (7107924, 7118416), (7118975, 7119805), (7119919, 7120523), (7120652, 7124987), (7125191, 7125411)] 2021-10-25 09:35:48.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038391: ['FBtr0083218', 'FBtr0303260', 'FBtr0303261'] 2021-10-25 09:35:48.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030851: ['FBtr0074486'] 2021-10-25 09:35:48.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030851 has a single transcript. 2021-10-25 09:35:48.349 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329857': ['FBtr0329859']} 2021-10-25 09:35:48.349 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329859']] 2021-10-25 09:35:48.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030853: ['FBtr0074452', 'FBtr0340622'] 2021-10-25 09:35:48.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010409: ['FBtr0086947'] 2021-10-25 09:35:48.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010409 has a single transcript. 2021-10-25 09:35:48.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010411: ['FBtr0086273', 'FBtr0086274'] 2021-10-25 09:35:48.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17632179, 17632253), (17632460, 17632589), (17633108, 17633262)] 2021-10-25 09:35:48.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034694: ['FBtr0071758'] 2021-10-25 09:35:48.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034694 has a single transcript. 2021-10-25 09:35:48.413 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16009407, 16016227), (16009511, 16016227), (16012783, 16016227), (16016565, 16016708), (16017642, 16017710), (16018206, 16018264), (16018595, 16018656)] 2021-10-25 09:35:48.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.414 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20264007, 20264075), (20264110, 20264246), (20264432, 20264492)] 2021-10-25 09:35:48.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034697: ['FBtr0071790'] 2021-10-25 09:35:48.422 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034697 has a single transcript. 2021-10-25 09:35:48.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034700: ['FBtr0071765'] 2021-10-25 09:35:48.429 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034700 has a single transcript. 2021-10-25 09:35:48.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034703: ['FBtr0071787'] 2021-10-25 09:35:48.437 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034703 has a single transcript. 2021-10-25 09:35:48.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034704: ['FBtr0071767'] 2021-10-25 09:35:48.444 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034704 has a single transcript. 2021-10-25 09:35:48.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034705: ['FBtr0071786', 'FBtr0342982', 'FBtr0342983'] 2021-10-25 09:35:48.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263967: ['FBtr0329875', 'FBtr0336917'] 2021-10-25 09:35:48.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030854: ['FBtr0074484', 'FBtr0340623'] 2021-10-25 09:35:48.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010412: ['FBtr0340149', 'FBtr0074312', 'FBtr0074313', 'FBtr0074311', 'FBtr0345129'] 2021-10-25 09:35:48.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7492792, 7493354)] 2021-10-25 09:35:48.498 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7492363, 7493497, 'FBtr0329875_exon_1') contains intron (7492792, 7493354) 2021-10-25 09:35:48.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0329875_exon_1'] 2021-10-25 09:35:48.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17634353, 17634573), (17634974, 17635341), (17634977, 17635341)] 2021-10-25 09:35:48.526 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038394: ['FBtr0083222'] 2021-10-25 09:35:48.534 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038394 has a single transcript. 2021-10-25 09:35:48.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22178496, 22182822), (22178496, 22182762), (22178496, 22178617)] 2021-10-25 09:35:48.537 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.537 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038395: ['FBtr0083237', 'FBtr0347558', 'FBtr0336487'] 2021-10-25 09:35:48.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263968: ['FBtr0070972', 'FBtr0343321'] 2021-10-25 09:35:48.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030855: ['FBtr0074453'] 2021-10-25 09:35:48.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030855 has a single transcript. 2021-10-25 09:35:48.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030858: ['FBtr0074480'] 2021-10-25 09:35:48.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030858 has a single transcript. 2021-10-25 09:35:48.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16045160, 16045220), (16045275, 16045354), (16045275, 16045342), (16045674, 16045806)] 2021-10-25 09:35:48.639 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.639 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030859: ['FBtr0074479'] 2021-10-25 09:35:48.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030859 has a single transcript. 2021-10-25 09:35:48.648 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16637927, 16638232), (16637949, 16638232), (16638303, 16638405)] 2021-10-25 09:35:48.649 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16637893, 16638303, 'FBtr0074313_exon_1') contains intron (16637927, 16638232) 2021-10-25 09:35:48.649 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074313_exon_1'] 2021-10-25 09:35:48.649 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030863: ['FBtr0074476', 'FBtr0100463', 'FBtr0340633', 'FBtr0346186'] 2021-10-25 09:35:48.663 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6824986, 6825055), (6825419, 6825489), (6827749, 6827817), (6831318, 6833864), (6834184, 6834249), (6835594, 6835644), (6836613, 6836680), (6837029, 6837100)] 2021-10-25 09:35:48.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034706: ['FBtr0071769'] 2021-10-25 09:35:48.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034706 has a single transcript. 2021-10-25 09:35:48.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034707: ['FBtr0071770'] 2021-10-25 09:35:48.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034707 has a single transcript. 2021-10-25 09:35:48.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034708: ['FBtr0071771', 'FBtr0071772'] 2021-10-25 09:35:48.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263970: ['FBtr0329886', 'FBtr0345479'] 2021-10-25 09:35:48.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17701165, 17701305), (17701776, 17702200)] 2021-10-25 09:35:48.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038396: ['FBtr0083223'] 2021-10-25 09:35:48.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038396 has a single transcript. 2021-10-25 09:35:48.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22186094, 22186516), (22186320, 22186516), (22186706, 22186767), (22187501, 22187559), (22187795, 22187851), (22188190, 22188244), (22188808, 22188867), (22189051, 22189113)] 2021-10-25 09:35:48.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038397: ['FBtr0083235'] 2021-10-25 09:35:48.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038397 has a single transcript. 2021-10-25 09:35:48.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038398: ['FBtr0083225', 'FBtr0345306'] 2021-10-25 09:35:48.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8029307, 8029361)] 2021-10-25 09:35:48.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16084046, 16084104), (16084181, 16085706), (16085808, 16085877), (16086121, 16086187)] 2021-10-25 09:35:48.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034709: ['FBtr0071784', 'FBtr0071785'] 2021-10-25 09:35:48.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263971: ['FBtr0329904'] 2021-10-25 09:35:48.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263971 has a single transcript. 2021-10-25 09:35:48.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263973: ['FBtr0307514', 'FBtr0307513', 'FBtr0307512'] 2021-10-25 09:35:48.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010414: ['FBtr0072362', 'FBtr0343316'] 2021-10-25 09:35:48.886 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22190503, 22190581), (22191567, 22191661), (22191855, 22193033), (22191855, 22202489)] 2021-10-25 09:35:48.887 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.887 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030864: ['FBtr0074475'] 2021-10-25 09:35:48.896 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030864 has a single transcript. 2021-10-25 09:35:48.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038400: ['FBtr0083281', 'FBtr0344013', 'FBtr0347199'] 2021-10-25 09:35:48.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030868: ['FBtr0074474'] 2021-10-25 09:35:48.903 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030868 has a single transcript. 2021-10-25 09:35:48.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030869: ['FBtr0074473', 'FBtr0310310'] 2021-10-25 09:35:48.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24405697, 24405756), (24405957, 24406524), (24406819, 24406932), (24407385, 24407441), (24407652, 24408962), (24409239, 24409386), (24409874, 24410377), (24409874, 24410395)] 2021-10-25 09:35:48.931 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.931 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6564371, 6564726), (6564973, 6565390), (6569000, 6570877), (6569000, 6570497), (6570557, 6570877), (6571193, 6571607), (6572122, 6584127), (6584318, 6589391), (6584318, 6587734), (6587968, 6589391)] 2021-10-25 09:35:48.947 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17822350, 17822426), (17822559, 17822624), (17822732, 17822797), (17822888, 17822958), (17823127, 17823190), (17823303, 17823377), (17823318, 17823377), (17825481, 17825546), (17825890, 17827322)] 2021-10-25 09:35:48.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:48.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034710: ['FBtr0071783'] 2021-10-25 09:35:48.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034710 has a single transcript. 2021-10-25 09:35:48.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034712: ['FBtr0071781', 'FBtr0345581'] 2021-10-25 09:35:48.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16146359, 16146422)] 2021-10-25 09:35:48.996 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:48.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.015 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010415: ['FBtr0071706', 'FBtr0071707', 'FBtr0273206', 'FBtr0305897', 'FBtr0342892', 'FBtr0342893', 'FBtr0342894', 'FBtr0342895'] 2021-10-25 09:35:49.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22209504, 22209562), (22210256, 22210318)] 2021-10-25 09:35:49.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030870: ['FBtr0074462', 'FBtr0342784'] 2021-10-25 09:35:49.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263974: ['FBtr0329922'] 2021-10-25 09:35:49.072 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263974 has a single transcript. 2021-10-25 09:35:49.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263975: ['FBtr0347098'] 2021-10-25 09:35:49.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263975 has a single transcript. 2021-10-25 09:35:49.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17831446, 17840159), (17840289, 17840354), (17840695, 17840761), (17840927, 17840989)] 2021-10-25 09:35:49.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263976: ['FBtr0329959'] 2021-10-25 09:35:49.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263976 has a single transcript. 2021-10-25 09:35:49.091 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034713: ['FBtr0071773'] 2021-10-25 09:35:49.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034713 has a single transcript. 2021-10-25 09:35:49.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263977: ['FBtr0113895', 'FBtr0345179'] 2021-10-25 09:35:49.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034715: ['FBtr0346956'] 2021-10-25 09:35:49.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034715 has a single transcript. 2021-10-25 09:35:49.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034716: ['FBtr0071777', 'FBtr0113105', 'FBtr0301476'] 2021-10-25 09:35:49.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038401: ['FBtr0083251', 'FBtr0344009'] 2021-10-25 09:35:49.144 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3735166, 3735268), (3735446, 3744835)] 2021-10-25 09:35:49.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030871: ['FBtr0074472'] 2021-10-25 09:35:49.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030871 has a single transcript. 2021-10-25 09:35:49.167 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030872: ['FBtr0074464', 'FBtr0303572', 'FBtr0339750'] 2021-10-25 09:35:49.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16147363, 16147446), (16147363, 16147443), (16147670, 16147742), (16148374, 16148434)] 2021-10-25 09:35:49.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22223977, 22224031), (22224483, 22224544), (22225407, 22225913), (22226246, 22226316), (22226546, 22226624), (22227381, 22228492), (22227381, 22228119)] 2021-10-25 09:35:49.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.207 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263979: ['FBtr0301845', 'FBtr0083052'] 2021-10-25 09:35:49.238 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21394735, 21394877), (21395045, 21398064), (21395045, 21399174), (21395045, 21398886), (21398580, 21398886), (21398580, 21399174), (21398583, 21398886), (21398583, 21399174), (21399313, 21412310), (21412418, 21480090), (21412418, 21416879), (21480356, 21481013), (21480378, 21481013)] 2021-10-25 09:35:49.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.243 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17845360, 17845489), (17845420, 17845489), (17845758, 17846930), (17845758, 17846682), (17846792, 17846930), (17847419, 17847481)] 2021-10-25 09:35:49.244 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.244 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.252 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038402: ['FBtr0344010', 'FBtr0344011', 'FBtr0344012', 'FBtr0301709'] 2021-10-25 09:35:49.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15225914, 15225965), (15225914, 15225968), (15226526, 15226636)] 2021-10-25 09:35:49.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.281 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034717: ['FBtr0071811', 'FBtr0071812', 'FBtr0308774'] 2021-10-25 09:35:49.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030873: ['FBtr0074468', 'FBtr0074469', 'FBtr0074470', 'FBtr0074471'] 2021-10-25 09:35:49.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263980: ['FBtr0330007', 'FBtr0330009', 'FBtr0330010', 'FBtr0330011', 'FBtr0330012', 'FBtr0330013', 'FBtr0330016', 'FBtr0344200', 'FBtr0344201', 'FBtr0344202', 'FBtr0344203', 'FBtr0344204', 'FBtr0344205', 'FBtr0344206', 'FBtr0344207', 'FBtr0344208'] 2021-10-25 09:35:49.361 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16149915, 16149973), (16149915, 16149970), (16150182, 16150306), (16150182, 16150279), (16150182, 16150291), (16150550, 16150613), (16150807, 16151173)] 2021-10-25 09:35:49.363 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.363 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.416 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22293436, 22293924), (22293751, 22293924), (22295194, 22295256), (22295473, 22295532), (22295795, 22295852)] 2021-10-25 09:35:49.416 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22293433, 22295194, 'FBtr0071812_exon_1') contains intron (22293436, 22293924) 2021-10-25 09:35:49.417 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071812_exon_1'] 2021-10-25 09:35:49.417 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.457 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17848761, 17848818), (17849054, 17849116), (17849345, 17849413), (17849710, 17849775), (17849810, 17849907), (17850068, 17850212), (17850068, 17850288)] 2021-10-25 09:35:49.459 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17849907, 17850342, 'FBtr0074469_exon_1') contains intron (17850068, 17850212) 2021-10-25 09:35:49.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074469_exon_1'] 2021-10-25 09:35:49.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038404: ['FBtr0083253', 'FBtr0113241'] 2021-10-25 09:35:49.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034718: ['FBtr0071850', 'FBtr0071851', 'FBtr0071852', 'FBtr0071849', 'FBtr0342984'] 2021-10-25 09:35:49.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16172519, 16177542), (16172519, 16174307), (16174499, 16177542), (16177942, 16178396), (16178664, 16179341), (16179892, 16179952), (16180098, 16180163)] 2021-10-25 09:35:49.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.626 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010416: ['FBtr0074305', 'FBtr0340315'] 2021-10-25 09:35:49.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038405: ['FBtr0100110', 'FBtr0344472'] 2021-10-25 09:35:49.639 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030874: ['FBtr0074465'] 2021-10-25 09:35:49.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030874 has a single transcript. 2021-10-25 09:35:49.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030876: ['FBtr0074492', 'FBtr0303767', 'FBtr0303768', 'FBtr0303769'] 2021-10-25 09:35:49.666 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22301009, 22301363), (22301009, 22308207), (22301009, 22311695), (22308256, 22309929), (22308256, 22311083), (22308256, 22311695)] 2021-10-25 09:35:49.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16389327, 16389395), (16389877, 16389945), (16390392, 16390462), (16391175, 16391291)] 2021-10-25 09:35:49.667 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.668 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.668 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.686 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16181195, 16184957), (16185826, 16185888)] 2021-10-25 09:35:49.687 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16184957, 16186235, 'FBtr0100110_exon_2') contains intron (16185826, 16185888) 2021-10-25 09:35:49.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100110_exon_2'] 2021-10-25 09:35:49.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010417: ['FBtr0074941', 'FBtr0333272'] 2021-10-25 09:35:49.759 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0038407: ['FBtr0083278'] 2021-10-25 09:35:49.759 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0038407 has a single transcript. 2021-10-25 09:35:49.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17857015, 17857163), (17857358, 17857502), (17857358, 17857472), (17857358, 17857491), (17857650, 17858051)] 2021-10-25 09:35:49.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17857111, 17857650, 'FBtr0303767_exon_1') contains intron (17857358, 17857502) 2021-10-25 09:35:49.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303767_exon_1'] 2021-10-25 09:35:49.764 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.779 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19600044, 19600106), (19600276, 19600333), (19600789, 19600909), (19600789, 19600912)] 2021-10-25 09:35:49.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15402383, 15409565), (15410542, 15415124), (15415229, 15419350), (15416838, 15419350), (15419551, 15420675), (15420784, 15420850), (15420956, 15421526), (15421643, 15421941), (15422187, 15422716), (15422896, 15422969), (15423095, 15424258), (15424405, 15452856), (15425666, 15452856), (15426627, 15452856), (15453008, 15456434), (15453008, 15453740), (15453797, 15456434), (15456559, 15456659), (15456815, 15460872), (15456815, 15458898), (15456815, 15463297), (15456815, 15457747), (15457924, 15458898), (15457924, 15463297), (15459267, 15464470), (15459267, 15465330), (15459267, 15460872), (15459267, 15463297), (15461226, 15465357), (15461226, 15463297), (15464686, 15465330), (15464686, 15465357), (15465491, 15465649), (15465506, 15465649), (15465745, 15466578), (15466773, 15466848)] 2021-10-25 09:35:49.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010421: ['FBtr0082310'] 2021-10-25 09:35:49.846 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010421 has a single transcript. 2021-10-25 09:35:49.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010422: ['FBtr0080722', 'FBtr0332475'] 2021-10-25 09:35:49.864 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330012': ['FBtr0330013']} 2021-10-25 09:35:49.864 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330013']] 2021-10-25 09:35:49.900 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15060366, 15060432)] 2021-10-25 09:35:49.901 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:49.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:49.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034720: ['FBtr0071846', 'FBtr0071847', 'FBtr0113106', 'FBtr0113107', 'FBtr0342990'] 2021-10-25 09:35:49.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030877: ['FBtr0074544'] 2021-10-25 09:35:49.952 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030877 has a single transcript. 2021-10-25 09:35:49.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030878: ['FBtr0074493', 'FBtr0334034'] 2021-10-25 09:35:49.970 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010423: ['FBtr0088184', 'FBtr0345540'] 2021-10-25 09:35:50.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17861679, 17861837), (17862200, 17862273)] 2021-10-25 09:35:50.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11274142, 11274579), (11274831, 11274889), (11275064, 11275220)] 2021-10-25 09:35:50.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22334880, 22334940), (22334964, 22335680), (22335792, 22338800), (22337912, 22338800), (22338945, 22339045), (22339207, 22339302), (22339797, 22339927), (22340127, 22340576), (22340637, 22340692), (22341595, 22342520), (22341595, 22344713), (22342730, 22344713), (22345293, 22360253), (22345293, 22346043), (22345293, 22346647), (22346359, 22346647), (22346709, 22354387), (22346709, 22360253), (22360288, 22372776)] 2021-10-25 09:35:50.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010424: ['FBtr0089585', 'FBtr0345120'] 2021-10-25 09:35:50.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030880: ['FBtr0074495'] 2021-10-25 09:35:50.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030880 has a single transcript. 2021-10-25 09:35:50.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030881: ['FBtr0074494'] 2021-10-25 09:35:50.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030881 has a single transcript. 2021-10-25 09:35:50.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030882: ['FBtr0340369', 'FBtr0300969', 'FBtr0300970', 'FBtr0300971', 'FBtr0300972', 'FBtr0300973', 'FBtr0300974'] 2021-10-25 09:35:50.156 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17046268, 17046340), (17046458, 17046522), (17046579, 17047349), (17047601, 17047964)] 2021-10-25 09:35:50.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.157 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010425: ['FBtr0088160'] 2021-10-25 09:35:50.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010425 has a single transcript. 2021-10-25 09:35:50.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010431: ['FBtr0076613'] 2021-10-25 09:35:50.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010431 has a single transcript. 2021-10-25 09:35:50.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010433: ['FBtr0081828'] 2021-10-25 09:35:50.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010433 has a single transcript. 2021-10-25 09:35:50.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010434: ['FBtr0086508', 'FBtr0086509', 'FBtr0086506', 'FBtr0301279', 'FBtr0340468', 'FBtr0340469'] 2021-10-25 09:35:50.304 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034721: ['FBtr0071819'] 2021-10-25 09:35:50.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034721 has a single transcript. 2021-10-25 09:35:50.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034722: ['FBtr0071820', 'FBtr0342988'] 2021-10-25 09:35:50.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17889795, 17889925), (17890149, 17890460), (17890673, 17896527), (17890673, 17892451), (17890673, 17897187), (17890673, 17891587), (17891934, 17892451), (17891934, 17897187), (17896661, 17897187), (17897230, 17897375), (17897614, 17897690), (17898075, 17898152)] 2021-10-25 09:35:50.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22375272, 22375383), (22376341, 22376407), (22377592, 22377649)] 2021-10-25 09:35:50.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034723: ['FBtr0071822', 'FBtr0342989'] 2021-10-25 09:35:50.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19229114, 19229423), (19229653, 19235120), (19235164, 19235470), (19235662, 19235762), (19236208, 19236266), (19236419, 19236484), (19236843, 19236941), (19237063, 19238151), (19237063, 19237327), (19237063, 19237339), (19237063, 19237741), (19237441, 19238151), (19237771, 19238151), (19238314, 19238381), (19238434, 19238788), (19238434, 19241215), (19238434, 19242173), (19241785, 19242173), (19241785, 19242703), (19242395, 19242703), (19242395, 19242483), (19242395, 19242489), (19242585, 19242703), (19242859, 19243068), (19243179, 19243254)] 2021-10-25 09:35:50.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.454 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22383194, 22386394), (22383194, 22386373), (22386528, 22390980), (22391208, 22391269), (22391592, 22391683), (22392241, 22392306), (22392511, 22392568)] 2021-10-25 09:35:50.498 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034724: ['FBtr0071845', 'FBtr0339539'] 2021-10-25 09:35:50.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263981: ['FBtr0343971'] 2021-10-25 09:35:50.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263981 has a single transcript. 2021-10-25 09:35:50.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263982: ['FBtr0330018'] 2021-10-25 09:35:50.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263982 has a single transcript. 2021-10-25 09:35:50.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263983: ['FBtr0346867', 'FBtr0330024'] 2021-10-25 09:35:50.651 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22394553, 22394611), (22394815, 22401638)] 2021-10-25 09:35:50.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18950603, 18958361), (18959924, 18969418), (18969596, 18969681), (18969708, 18969768), (18969977, 18970074), (18970288, 18970630), (18970848, 18971289), (18971416, 18971486), (18971588, 18971783), (18972212, 18972276), (18972680, 18972749), (18972919, 18972981), (18973159, 18974990), (18975170, 18975457)] 2021-10-25 09:35:50.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030883: ['FBtr0074540'] 2021-10-25 09:35:50.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030883 has a single transcript. 2021-10-25 09:35:50.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030884: ['FBtr0074505', 'FBtr0344233'] 2021-10-25 09:35:50.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034725: ['FBtr0071823', 'FBtr0339533'] 2021-10-25 09:35:50.762 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17911703, 17918327), (17911768, 17918327), (17918588, 17918757), (17918971, 17920579), (17921178, 17921237), (17921697, 17921763), (17922163, 17922222)] 2021-10-25 09:35:50.763 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.763 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263985: ['FBtr0330023'] 2021-10-25 09:35:50.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263985 has a single transcript. 2021-10-25 09:35:50.775 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263986: ['FBtr0084303'] 2021-10-25 09:35:50.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263986 has a single transcript. 2021-10-25 09:35:50.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010435: ['FBtr0072400', 'FBtr0072401', 'FBtr0072402', 'FBtr0343507', 'FBtr0343508'] 2021-10-25 09:35:50.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22404460, 22407043), (22407325, 22407454)] 2021-10-25 09:35:50.781 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263987: ['FBtr0070795', 'FBtr0308688', 'FBtr0308689', 'FBtr0070794'] 2021-10-25 09:35:50.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030886: ['FBtr0074539'] 2021-10-25 09:35:50.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030886 has a single transcript. 2021-10-25 09:35:50.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034726: ['FBtr0071827', 'FBtr0301243'] 2021-10-25 09:35:50.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030887: ['FBtr0089574'] 2021-10-25 09:35:50.849 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030887 has a single transcript. 2021-10-25 09:35:50.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030889: ['FBtr0074508', 'FBtr0112999'] 2021-10-25 09:35:50.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22412034, 22412088)] 2021-10-25 09:35:50.907 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5415041, 5415321), (5415455, 5415527), (5415918, 5416189), (5417374, 5418316), (5417374, 5420193), (5417374, 5418353), (5417374, 5420451)] 2021-10-25 09:35:50.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24977460, 24977518), (24977640, 24977698), (24978270, 24978330), (24978504, 24978565), (24978818, 24979532), (24978818, 24984649), (24979661, 24980999), (24979661, 24984380), (24979661, 24983026), (24979661, 24984649), (24984502, 24984558), (24984940, 24985644)] 2021-10-25 09:35:50.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18044165, 18044284), (18044723, 18044780), (18044938, 18045017), (18044938, 18045162), (18045104, 18045162), (18045362, 18045609), (18045969, 18046077), (18046234, 18046302), (18047144, 18047202), (18047536, 18047700), (18047819, 18047880), (18047956, 18048014)] 2021-10-25 09:35:50.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:50.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:50.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034727: ['FBtr0071842'] 2021-10-25 09:35:50.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034727 has a single transcript. 2021-10-25 09:35:50.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034728: ['FBtr0301668', 'FBtr0305323'] 2021-10-25 09:35:51.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030890: ['FBtr0074530', 'FBtr0074531', 'FBtr0343317', 'FBtr0343318'] 2021-10-25 09:35:51.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22421738, 22421793), (22422007, 22422063), (22423242, 22423298), (22423722, 22423784), (22423954, 22424010), (22424271, 22424331), (22424434, 22424491), (22424438, 22424495)] 2021-10-25 09:35:51.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263988: ['FBtr0072539', 'FBtr0072538'] 2021-10-25 09:35:51.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034729: ['FBtr0071840', 'FBtr0071841'] 2021-10-25 09:35:51.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18079930, 18079992), (18080126, 18080187), (18080357, 18080415), (18081391, 18081742), (18082141, 18082218), (18082379, 18088365), (18082379, 18085197), (18082379, 18085193), (18082379, 18084778)] 2021-10-25 09:35:51.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010438: ['FBtr0083277'] 2021-10-25 09:35:51.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010438 has a single transcript. 2021-10-25 09:35:51.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010441: ['FBtr0085179', 'FBtr0334732'] 2021-10-25 09:35:51.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(150018, 150083), (150296, 150348), (151790, 151847), (152069, 152122), (152272, 152340), (152298, 152340)] 2021-10-25 09:35:51.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22426254, 22426312), (22426626, 22426681)] 2021-10-25 09:35:51.170 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22425732, 22426626, 'FBtr0071841_exon_2') contains intron (22426254, 22426312) 2021-10-25 09:35:51.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071841_exon_2'] 2021-10-25 09:35:51.170 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.197 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27251850, 27251913), (27252579, 27252637)] 2021-10-25 09:35:51.198 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.198 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263992: ['FBtr0330250'] 2021-10-25 09:35:51.231 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263992 has a single transcript. 2021-10-25 09:35:51.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034730: ['FBtr0071830'] 2021-10-25 09:35:51.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034730 has a single transcript. 2021-10-25 09:35:51.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263993: ['FBtr0330261', 'FBtr0330262', 'FBtr0330263', 'FBtr0330264', 'FBtr0330265', 'FBtr0330266', 'FBtr0330267', 'FBtr0330268', 'FBtr0345896', 'FBtr0345897', 'FBtr0345898'] 2021-10-25 09:35:51.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034731: ['FBtr0342991', 'FBtr0342992'] 2021-10-25 09:35:51.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010452: ['FBtr0075890', 'FBtr0330075'] 2021-10-25 09:35:51.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030891: ['FBtr0074510', 'FBtr0339540'] 2021-10-25 09:35:51.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22455468, 22460067), (22460146, 22466477), (22466563, 22466683), (22466947, 22469585), (22470156, 22470630), (22470876, 22471027), (22471184, 22471277)] 2021-10-25 09:35:51.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13114746, 13115188)] 2021-10-25 09:35:51.305 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.305 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.313 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075890': ['FBtr0330075']} 2021-10-25 09:35:51.314 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330075']] 2021-10-25 09:35:51.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010453: ['FBtr0089291', 'FBtr0334799'] 2021-10-25 09:35:51.332 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:51.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.333 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.348 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074510': ['FBtr0339540']} 2021-10-25 09:35:51.349 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0339540']] 2021-10-25 09:35:51.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030892: ['FBtr0089576', 'FBtr0308352'] 2021-10-25 09:35:51.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034733: ['FBtr0071832'] 2021-10-25 09:35:51.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034733 has a single transcript. 2021-10-25 09:35:51.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034734: ['FBtr0071833'] 2021-10-25 09:35:51.375 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034734 has a single transcript. 2021-10-25 09:35:51.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7256246, 7256459), (7256687, 7256761), (7257260, 7275359)] 2021-10-25 09:35:51.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.378 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034735: ['FBtr0071834'] 2021-10-25 09:35:51.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034735 has a single transcript. 2021-10-25 09:35:51.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034736: ['FBtr0071835'] 2021-10-25 09:35:51.389 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034736 has a single transcript. 2021-10-25 09:35:51.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034737: ['FBtr0071836'] 2021-10-25 09:35:51.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034737 has a single transcript. 2021-10-25 09:35:51.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18089231, 18089294), (18089924, 18089982), (18090237, 18090316)] 2021-10-25 09:35:51.401 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18089294, 18090237, 'FBtr0308352_exon_2') contains intron (18089924, 18089982) 2021-10-25 09:35:51.401 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308352_exon_2'] 2021-10-25 09:35:51.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034739: ['FBtr0071853'] 2021-10-25 09:35:51.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034739 has a single transcript. 2021-10-25 09:35:51.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034740: ['FBtr0071861', 'FBtr0345496'] 2021-10-25 09:35:51.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010470: ['FBtr0071703', 'FBtr0300397', 'FBtr0342896', 'FBtr0342897', 'FBtr0306013'] 2021-10-25 09:35:51.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030893: ['FBtr0074513', 'FBtr0307200', 'FBtr0307201', 'FBtr0343309', 'FBtr0343310'] 2021-10-25 09:35:51.470 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22650811, 22650869), (22650991, 22651052), (22651417, 22651541), (22651631, 22651758), (22651847, 22651994)] 2021-10-25 09:35:51.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034741: ['FBtr0071854', 'FBtr0343000', 'FBtr0343001'] 2021-10-25 09:35:51.577 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6864116, 6869260), (6864299, 6869260), (6868780, 6869260), (6870991, 6872715), (6872921, 6874321), (6872921, 6875931), (6872921, 6876341), (6872921, 6877913), (6876363, 6876560), (6878483, 6878545)] 2021-10-25 09:35:51.579 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6875985, 6878483, 'FBtr0330263_exon_1') contains intron (6876363, 6876560) 2021-10-25 09:35:51.580 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6875985, 6878483, 'FBtr0330267_exon_1') contains intron (6876363, 6876560) 2021-10-25 09:35:51.581 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876341, 6878483, 'FBtr0330268_exon_4') contains intron (6876363, 6876560) 2021-10-25 09:35:51.582 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876341, 6878483, 'FBtr0345898_exon_4') contains intron (6876363, 6876560) 2021-10-25 09:35:51.582 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330263_exon_1', 'FBtr0330267_exon_1', 'FBtr0330268_exon_4', 'FBtr0345898_exon_4'] 2021-10-25 09:35:51.583 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21487845, 21488018), (21487845, 21488006), (21488206, 21488272), (21488361, 21495130), (21495326, 21496632), (21495326, 21497063), (21495326, 21497780)] 2021-10-25 09:35:51.597 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.598 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.621 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18093457, 18093510), (18093622, 18095084), (18094097, 18095084), (18094754, 18095084), (18094815, 18095084), (18096453, 18096515), (18096621, 18096690), (18096873, 18096980)] 2021-10-25 09:35:51.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18096690, 18097413, 'FBtr0074513_exon_5') contains intron (18096873, 18096980) 2021-10-25 09:35:51.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18096690, 18097413, 'FBtr0307200_exon_4') contains intron (18096873, 18096980) 2021-10-25 09:35:51.622 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18096690, 18097413, 'FBtr0307201_exon_4') contains intron (18096873, 18096980) 2021-10-25 09:35:51.623 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18096690, 18097413, 'FBtr0343310_exon_5') contains intron (18096873, 18096980) 2021-10-25 09:35:51.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074513_exon_5', 'FBtr0307200_exon_4', 'FBtr0307201_exon_4', 'FBtr0343310_exon_5'] 2021-10-25 09:35:51.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22598129, 22599910), (22599450, 22599910)] 2021-10-25 09:35:51.625 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.625 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034742: ['FBtr0300409', 'FBtr0308603'] 2021-10-25 09:35:51.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22601147, 22601212), (22601364, 22601529), (22601370, 22601529), (22601815, 22601947), (22602226, 22602288), (22602668, 22602725), (22605178, 22605262)] 2021-10-25 09:35:51.771 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034743: ['FBtr0071855', 'FBtr0343002'] 2021-10-25 09:35:51.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010473: ['FBtr0089271', 'FBtr0089268', 'FBtr0089269', 'FBtr0089270', 'FBtr0301863', 'FBtr0301864', 'FBtr0333484', 'FBtr0333485', 'FBtr0347158', 'FBtr0347159'] 2021-10-25 09:35:51.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030894: ['FBtr0074527', 'FBtr0074528', 'FBtr0310272'] 2021-10-25 09:35:51.887 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22605819, 22606020), (22606169, 22606246), (22606288, 22606508), (22606640, 22606933), (22607048, 22607754)] 2021-10-25 09:35:51.888 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.888 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:51.928 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18098511, 18098578), (18098800, 18098867), (18099222, 18099286), (18099442, 18099505), (18099722, 18100064), (18099722, 18101092)] 2021-10-25 09:35:51.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:51.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034744: ['FBtr0071856', 'FBtr0308602'] 2021-10-25 09:35:52.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22608393, 22608477), (22608618, 22608683), (22608793, 22608855)] 2021-10-25 09:35:52.159 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.159 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030895: ['FBtr0074515'] 2021-10-25 09:35:52.171 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030895 has a single transcript. 2021-10-25 09:35:52.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030897: ['FBtr0074545', 'FBtr0100239', 'FBtr0335119', 'FBtr0335120'] 2021-10-25 09:35:52.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034745: ['FBtr0071940'] 2021-10-25 09:35:52.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034745 has a single transcript. 2021-10-25 09:35:52.236 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4283252, 4284700), (4283252, 4284758), (4284302, 4284758), (4285074, 4295162), (4295621, 4299067), (4299189, 4303335), (4303618, 4304599), (4304841, 4307190), (4304841, 4305348), (4305423, 4307190), (4307461, 4307562), (4308426, 4308775), (4308859, 4312027), (4308859, 4314201), (4312111, 4314201), (4314615, 4318576), (4314615, 4318593), (4318708, 4318906), (4318708, 4319329), (4318977, 4319329)] 2021-10-25 09:35:52.241 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034748: ['FBtr0071938'] 2021-10-25 09:35:52.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034748 has a single transcript. 2021-10-25 09:35:52.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034750: ['FBtr0071936'] 2021-10-25 09:35:52.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034750 has a single transcript. 2021-10-25 09:35:52.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034753: ['FBtr0071933', 'FBtr0345504'] 2021-10-25 09:35:52.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263994: ['FBtr0330259', 'FBtr0330260'] 2021-10-25 09:35:52.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18155590, 18161012), (18155594, 18161012), (18155732, 18161012), (18155732, 18161058), (18161292, 18167631), (18167656, 18167784), (18167833, 18168402), (18168492, 18169488), (18169567, 18169695), (18169784, 18169988)] 2021-10-25 09:35:52.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22645534, 22645920), (22646045, 22646181)] 2021-10-25 09:35:52.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15175551, 15175810), (15175999, 15177692), (15181333, 15181410), (15181498, 15183998), (15184083, 15184805), (15184083, 15186285), (15185171, 15186285)] 2021-10-25 09:35:52.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034755: ['FBtr0071929', 'FBtr0345503'] 2021-10-25 09:35:52.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263995: ['FBtr0330269', 'FBtr0330270', 'FBtr0330271', 'FBtr0330272', 'FBtr0330273', 'FBtr0330274', 'FBtr0330275', 'FBtr0330276', 'FBtr0330277', 'FBtr0330278', 'FBtr0330279', 'FBtr0330280'] 2021-10-25 09:35:52.459 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22649343, 22649407)] 2021-10-25 09:35:52.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030898: ['FBtr0074591'] 2021-10-25 09:35:52.480 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030898 has a single transcript. 2021-10-25 09:35:52.490 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030899: ['FBtr0074590'] 2021-10-25 09:35:52.490 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030899 has a single transcript. 2021-10-25 09:35:52.497 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030900: ['FBtr0074549'] 2021-10-25 09:35:52.497 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030900 has a single transcript. 2021-10-25 09:35:52.504 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030904: ['FBtr0300182'] 2021-10-25 09:35:52.504 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030904 has a single transcript. 2021-10-25 09:35:52.511 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030905: ['FBtr0074584', 'FBtr0346294'] 2021-10-25 09:35:52.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034756: ['FBtr0071928'] 2021-10-25 09:35:52.537 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034756 has a single transcript. 2021-10-25 09:35:52.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034758: ['FBtr0071862', 'FBtr0309799', 'FBtr0345498'] 2021-10-25 09:35:52.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18259103, 18259166)] 2021-10-25 09:35:52.567 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030911: ['FBtr0346331'] 2021-10-25 09:35:52.640 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030911 has a single transcript. 2021-10-25 09:35:52.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22658275, 22658922), (22659977, 22660035), (22660861, 22661068)] 2021-10-25 09:35:52.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.643 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030912: ['FBtr0074579', 'FBtr0344255'] 2021-10-25 09:35:52.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18314936, 18315016), (18315336, 18319397), (18315336, 18315581), (18319442, 18320946)] 2021-10-25 09:35:52.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010482: ['FBtr0086136', 'FBtr0086137', 'FBtr0301420', 'FBtr0301421', 'FBtr0301423', 'FBtr0301424', 'FBtr0308840', 'FBtr0308841', 'FBtr0308842'] 2021-10-25 09:35:52.784 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030913: ['FBtr0074578', 'FBtr0307553'] 2021-10-25 09:35:52.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034759: ['FBtr0071863', 'FBtr0309800'] 2021-10-25 09:35:52.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17921469, 17937521), (17932164, 17937521), (17932452, 17937521), (17937580, 17966472), (17944213, 17947193), (17944286, 17947193), (17947598, 17966472), (17967828, 18006934), (18007012, 18007077), (18007131, 18007261), (18007324, 18008867), (18007324, 18008864), (18009009, 18009947), (18010150, 18010227), (18010574, 18011096), (18010574, 18012095), (18010574, 18010920), (18010574, 18013147), (18010958, 18011096), (18011255, 18012095), (18011713, 18013147), (18011713, 18012095), (18012150, 18013147), (18012150, 18013149)] 2021-10-25 09:35:52.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.807 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18326775, 18327194), (18328564, 18328949), (18329481, 18330396), (18330519, 18354872), (18354994, 18355920)] 2021-10-25 09:35:52.838 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.839 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22658275, 22658922), (22659977, 22660035), (22660861, 22661068)] 2021-10-25 09:35:52.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030914: ['FBtr0074553', 'FBtr0343296'] 2021-10-25 09:35:52.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034761: ['FBtr0071865', 'FBtr0309802'] 2021-10-25 09:35:52.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18359008, 18359064), (18359555, 18359930), (18360456, 18361226)] 2021-10-25 09:35:52.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.972 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:52.987 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22663874, 22663988), (22663913, 22663988), (22664121, 22664174)] 2021-10-25 09:35:52.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:52.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6721778, 6721844), (6722027, 6722087), (6722254, 6722307), (6722464, 6722527), (6722694, 6722751), (6722908, 6723655), (6722908, 6723294), (6723459, 6723655), (6723787, 6723839), (6724022, 6725254), (6724022, 6724567), (6724816, 6725254), (6725392, 6725450), (6725639, 6725703), (6726027, 6737960), (6726027, 6726256), (6726388, 6731550), (6728320, 6728590), (6728373, 6728590), (6729073, 6730072), (6729073, 6730300), (6729073, 6731439), (6730114, 6730300), (6730114, 6731439), (6731266, 6731439), (6731490, 6731550), (6731733, 6731796), (6731934, 6732001), (6732184, 6732237), (6732882, 6732942), (6733257, 6737960), (6733257, 6733627), (6733942, 6734013), (6734194, 6734258), (6734392, 6734454), (6734598, 6734728), (6734911, 6737960), (6734911, 6737493), (6737529, 6737960), (6738127, 6738198), (6738355, 6740038)] 2021-10-25 09:35:53.038 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030915: ['FBtr0074558'] 2021-10-25 09:35:53.049 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030915 has a single transcript. 2021-10-25 09:35:53.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034763: ['FBtr0071868', 'FBtr0345500'] 2021-10-25 09:35:53.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030918: ['FBtr0074560'] 2021-10-25 09:35:53.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030918 has a single transcript. 2021-10-25 09:35:53.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030921: ['FBtr0074563'] 2021-10-25 09:35:53.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030921 has a single transcript. 2021-10-25 09:35:53.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030925: ['FBtr0074630', 'FBtr0113000', 'FBtr0343048'] 2021-10-25 09:35:53.108 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22671245, 22671629)] 2021-10-25 09:35:53.110 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.165 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18480484, 18480541), (18480728, 18480793), (18481065, 18481160), (18481228, 18481356), (18481228, 18482308), (18482133, 18482308), (18482489, 18482554), (18482643, 18483440)] 2021-10-25 09:35:53.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034766: ['FBtr0071870'] 2021-10-25 09:35:53.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034766 has a single transcript. 2021-10-25 09:35:53.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034768: ['FBtr0071871'] 2021-10-25 09:35:53.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034768 has a single transcript. 2021-10-25 09:35:53.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034769: ['FBtr0071920'] 2021-10-25 09:35:53.197 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034769 has a single transcript. 2021-10-25 09:35:53.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034770: ['FBtr0071872'] 2021-10-25 09:35:53.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034770 has a single transcript. 2021-10-25 09:35:53.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034774: ['FBtr0071878'] 2021-10-25 09:35:53.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034774 has a single transcript. 2021-10-25 09:35:53.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034776: ['FBtr0339941', 'FBtr0071880'] 2021-10-25 09:35:53.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22764045, 22764106), (22764383, 22764456), (22764806, 22764870)] 2021-10-25 09:35:53.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.289 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030926: ['FBtr0074629'] 2021-10-25 09:35:53.310 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030926 has a single transcript. 2021-10-25 09:35:53.319 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030927: ['FBtr0074628'] 2021-10-25 09:35:53.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030927 has a single transcript. 2021-10-25 09:35:53.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030928: ['FBtr0074627'] 2021-10-25 09:35:53.326 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030928 has a single transcript. 2021-10-25 09:35:53.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030929: ['FBtr0074626', 'FBtr0343047'] 2021-10-25 09:35:53.409 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18493774, 18493847)] 2021-10-25 09:35:53.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034782: ['FBtr0302717'] 2021-10-25 09:35:53.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034782 has a single transcript. 2021-10-25 09:35:53.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034783: ['FBtr0071893'] 2021-10-25 09:35:53.427 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034783 has a single transcript. 2021-10-25 09:35:53.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034784: ['FBtr0071894', 'FBtr0343181'] 2021-10-25 09:35:53.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22840993, 22841055), (22842129, 22842210)] 2021-10-25 09:35:53.487 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263996: ['FBtr0330258'] 2021-10-25 09:35:53.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263996 has a single transcript. 2021-10-25 09:35:53.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030930: ['FBtr0074624', 'FBtr0074625', 'FBtr0346082'] 2021-10-25 09:35:53.509 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263997: ['FBtr0330322', 'FBtr0330323', 'FBtr0330324'] 2021-10-25 09:35:53.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034785: ['FBtr0303785'] 2021-10-25 09:35:53.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034785 has a single transcript. 2021-10-25 09:35:53.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034786: ['FBtr0071910', 'FBtr0343182'] 2021-10-25 09:35:53.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010488: ['FBtr0087787', 'FBtr0087786', 'FBtr0334772'] 2021-10-25 09:35:53.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10333751, 10335805), (10336451, 10343870), (10344028, 10346848), (10344056, 10346848)] 2021-10-25 09:35:53.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18497502, 18497944), (18498421, 18499231)] 2021-10-25 09:35:53.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.686 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330322': ['FBtr0330324']} 2021-10-25 09:35:53.687 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330324']] 2021-10-25 09:35:53.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22848138, 22848196), (22848358, 22848427), (22849485, 22849543), (22851016, 22851068), (22852541, 22852635)] 2021-10-25 09:35:53.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12916064, 12917994), (12917904, 12917994), (12920859, 12920984), (12922810, 12922878)] 2021-10-25 09:35:53.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263998: ['FBtr0330329', 'FBtr0330330', 'FBtr0330331', 'FBtr0330332'] 2021-10-25 09:35:53.772 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087786': ['FBtr0334772']} 2021-10-25 09:35:53.778 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0334772']] 2021-10-25 09:35:53.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030931: ['FBtr0074592'] 2021-10-25 09:35:53.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030931 has a single transcript. 2021-10-25 09:35:53.850 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034788: ['FBtr0071899'] 2021-10-25 09:35:53.850 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034788 has a single transcript. 2021-10-25 09:35:53.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030932: ['FBtr0074622', 'FBtr0340368'] 2021-10-25 09:35:53.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034789: ['FBtr0071900', 'FBtr0290095', 'FBtr0304921', 'FBtr0304923', 'FBtr0339762'] 2021-10-25 09:35:53.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010497: ['FBtr0080292'] 2021-10-25 09:35:53.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010497 has a single transcript. 2021-10-25 09:35:53.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010501: ['FBtr0072062'] 2021-10-25 09:35:53.887 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010501 has a single transcript. 2021-10-25 09:35:53.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010504: ['FBtr0088811', 'FBtr0088812', 'FBtr0088813', 'FBtr0088814', 'FBtr0339296'] 2021-10-25 09:35:53.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13143317, 13143374), (13144688, 13148670), (13144691, 13148670), (13148454, 13148670), (13148890, 13148952), (13149683, 13149749), (13150832, 13150888), (13151288, 13151366), (13151436, 13152618)] 2021-10-25 09:35:53.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:53.985 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18506353, 18506415), (18506656, 18507475), (18508681, 18512043)] 2021-10-25 09:35:53.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:53.987 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030933: ['FBtr0074621', 'FBtr0346083'] 2021-10-25 09:35:54.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8148395, 8148927), (8148395, 8149307), (8148395, 8156413), (8148395, 8156054)] 2021-10-25 09:35:54.129 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.129 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22875116, 22875428), (22875463, 22875566), (22875716, 22875894), (22876092, 22876144), (22876287, 22876349), (22876847, 22876901), (22876847, 22876913), (22877006, 22877074), (22877207, 22877258), (22877346, 22877741), (22877346, 22878155), (22877804, 22878155), (22878242, 22878339), (22878612, 22879561), (22879778, 22879869), (22880042, 22880132), (22880042, 22880477), (22880218, 22880477)] 2021-10-25 09:35:54.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18513829, 18514336)] 2021-10-25 09:35:54.168 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.168 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0263999: ['FBtr0334012'] 2021-10-25 09:35:54.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0263999 has a single transcript. 2021-10-25 09:35:54.192 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264000: ['FBtr0330340', 'FBtr0330341', 'FBtr0334765', 'FBtr0346866'] 2021-10-25 09:35:54.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030936: ['FBtr0074620'] 2021-10-25 09:35:54.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030936 has a single transcript. 2021-10-25 09:35:54.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030937: ['FBtr0074619'] 2021-10-25 09:35:54.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030937 has a single transcript. 2021-10-25 09:35:54.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030938: ['FBtr0074596'] 2021-10-25 09:35:54.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030938 has a single transcript. 2021-10-25 09:35:54.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030940: ['FBtr0074618'] 2021-10-25 09:35:54.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030940 has a single transcript. 2021-10-25 09:35:54.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030941: ['FBtr0074617', 'FBtr0342843'] 2021-10-25 09:35:54.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9252511, 9256146), (9256502, 9257403), (9257556, 9258097), (9258225, 9258824), (9258954, 9266314), (9266568, 9267002), (9267167, 9268889), (9269222, 9269433), (9269535, 9270191), (9270432, 9278386), (9278481, 9278581), (9278749, 9280918), (9281033, 9282668), (9283129, 9284007), (9284252, 9284580), (9285040, 9285276)] 2021-10-25 09:35:54.313 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.335 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330340': ['FBtr0330341', 'FBtr0346866']} 2021-10-25 09:35:54.335 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330341', 'FBtr0346866']] 2021-10-25 09:35:54.343 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18625064, 18625637), (18625817, 18628473), (18625817, 18625968), (18626147, 18628473), (18628708, 18628774), (18629251, 18634408)] 2021-10-25 09:35:54.344 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034791: ['FBtr0071907'] 2021-10-25 09:35:54.389 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034791 has a single transcript. 2021-10-25 09:35:54.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034792: ['FBtr0071906', 'FBtr0332910', 'FBtr0304924'] 2021-10-25 09:35:54.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264001: ['FBtr0330355', 'FBtr0330343', 'FBtr0330344', 'FBtr0330345', 'FBtr0330346', 'FBtr0330347', 'FBtr0330348', 'FBtr0330349', 'FBtr0330350', 'FBtr0330351', 'FBtr0330352', 'FBtr0330353', 'FBtr0330354', 'FBtr0330356', 'FBtr0330357'] 2021-10-25 09:35:54.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010516: ['FBtr0088082', 'FBtr0088083'] 2021-10-25 09:35:54.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030943: ['FBtr0074601'] 2021-10-25 09:35:54.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030943 has a single transcript. 2021-10-25 09:35:54.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030944: ['FBtr0074615'] 2021-10-25 09:35:54.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030944 has a single transcript. 2021-10-25 09:35:54.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030945: ['FBtr0074614'] 2021-10-25 09:35:54.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030945 has a single transcript. 2021-10-25 09:35:54.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030946: ['FBtr0074612', 'FBtr0074613'] 2021-10-25 09:35:54.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11689888, 11690445), (11690586, 11690677), (11690744, 11690812)] 2021-10-25 09:35:54.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.487 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22883825, 22883900), (22884291, 22884347), (22884661, 22884719), (22884664, 22884719), (22884793, 22884907), (22884802, 22884907), (22885000, 22885053), (22885243, 22885296), (22885356, 22885413), (22885811, 22885915)] 2021-10-25 09:35:54.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.489 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18654190, 18654295), (18654421, 18654546), (18654740, 18654806), (18656270, 18656323), (18656645, 18656713), (18656975, 18657097)] 2021-10-25 09:35:54.490 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18656713, 18657234, 'FBtr0074613_exon_1') contains intron (18656975, 18657097) 2021-10-25 09:35:54.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074613_exon_1'] 2021-10-25 09:35:54.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010520: ['FBtr0079874'] 2021-10-25 09:35:54.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010520 has a single transcript. 2021-10-25 09:35:54.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010531: ['FBtr0300944', 'FBtr0333068'] 2021-10-25 09:35:54.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030947: ['FBtr0074611'] 2021-10-25 09:35:54.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030947 has a single transcript. 2021-10-25 09:35:54.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030949: ['FBtr0074604'] 2021-10-25 09:35:54.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030949 has a single transcript. 2021-10-25 09:35:54.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030951: ['FBtr0074607'] 2021-10-25 09:35:54.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030951 has a single transcript. 2021-10-25 09:35:54.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10121753, 10121814), (10122440, 10122509), (10122458, 10122509)] 2021-10-25 09:35:54.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030952: ['FBtr0074605'] 2021-10-25 09:35:54.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030952 has a single transcript. 2021-10-25 09:35:54.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030954: ['FBtr0113003'] 2021-10-25 09:35:54.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030954 has a single transcript. 2021-10-25 09:35:54.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030955: ['FBtr0074631', 'FBtr0074632', 'FBtr0334453'] 2021-10-25 09:35:54.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034793: ['FBtr0071902', 'FBtr0332909'] 2021-10-25 09:35:54.662 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22886702, 22886758), (22887248, 22887309), (22887248, 22887306)] 2021-10-25 09:35:54.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010548: ['FBtr0088993', 'FBtr0088996', 'FBtr0300477', 'FBtr0300478', 'FBtr0300479', 'FBtr0300480', 'FBtr0300481', 'FBtr0310674', 'FBtr0310675', 'FBtr0310676', 'FBtr0308198', 'FBtr0336912'] 2021-10-25 09:35:54.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18775629, 18780680), (18776855, 18780680), (18779845, 18780680), (18781004, 18781077)] 2021-10-25 09:35:54.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034795: ['FBtr0071903'] 2021-10-25 09:35:54.733 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034795 has a single transcript. 2021-10-25 09:35:54.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034796: ['FBtr0071904'] 2021-10-25 09:35:54.744 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034796 has a single transcript. 2021-10-25 09:35:54.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034797: ['FBtr0071942', 'FBtr0071943', 'FBtr0304795'] 2021-10-25 09:35:54.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030956: ['FBtr0074661'] 2021-10-25 09:35:54.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030956 has a single transcript. 2021-10-25 09:35:54.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030958: ['FBtr0334467'] 2021-10-25 09:35:54.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030958 has a single transcript. 2021-10-25 09:35:54.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030959: ['FBtr0074660'] 2021-10-25 09:35:54.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030959 has a single transcript. 2021-10-25 09:35:54.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030960: ['FBtr0074635'] 2021-10-25 09:35:54.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030960 has a single transcript. 2021-10-25 09:35:54.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030961: ['FBtr0301153'] 2021-10-25 09:35:54.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030961 has a single transcript. 2021-10-25 09:35:54.837 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22896396, 22904071), (22896864, 22904071), (22904473, 22910512), (22910583, 22910821), (22910919, 22910975), (22912348, 22912416), (22912860, 22912989), (22913562, 22913616), (22913833, 22913895), (22914116, 22914178), (22914348, 22915444), (22914348, 22914519), (22914850, 22915444)] 2021-10-25 09:35:54.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030963: ['FBtr0074639'] 2021-10-25 09:35:54.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030963 has a single transcript. 2021-10-25 09:35:54.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13525210, 13532953), (13537996, 13538245), (13538871, 13538942), (13539101, 13541488), (13539119, 13541488), (13539119, 13540563), (13540641, 13541488), (13541587, 13541721), (13541608, 13541721), (13541998, 13542074), (13542022, 13542074), (13542218, 13584191), (13584271, 13602341), (13584271, 13608392), (13584271, 13638516), (13602476, 13638516), (13608846, 13638516), (13638547, 13664418), (13638565, 13777912), (13638565, 13651554), (13638565, 13664418), (13651596, 13664418), (13664874, 13666385), (13778311, 13783420), (13783530, 13786865), (13787056, 13798023), (13787056, 13803160)] 2021-10-25 09:35:54.847 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.849 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030964: ['FBtr0074640', 'FBtr0301667', 'FBtr0343604'] 2021-10-25 09:35:54.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18832946, 18837992), (18832946, 18838084), (18838342, 18840381), (18840460, 18840531), (18840558, 18840629), (18841120, 18842217), (18842007, 18842217)] 2021-10-25 09:35:54.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:54.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:54.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034800: ['FBtr0071995', 'FBtr0303465'] 2021-10-25 09:35:55.019 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22932306, 22932363), (22933047, 22933118), (22933318, 22933383), (22933508, 22933600)] 2021-10-25 09:35:55.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.044 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7467050, 7467482), (7467050, 7467220), (7467316, 7467473), (7467316, 7467482), (7467633, 7467690), (7467826, 7469109), (7467826, 7468421), (7468537, 7469359), (7469225, 7469359), (7469557, 7469614), (7469845, 7469908), (7470072, 7470393), (7470615, 7470701), (7470882, 7473287), (7473346, 7473721), (7473843, 7474625), (7473843, 7475341), (7473843, 7474004), (7473843, 7474571), (7473843, 7473915), (7475377, 7475439), (7475380, 7475439), (7475559, 7476463), (7475559, 7476246), (7475559, 7476888)] 2021-10-25 09:35:55.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0088993_exon_11') contains intron (7467050, 7467220) 2021-10-25 09:35:55.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7473721, 7474130, 'FBtr0088993_exon_1') contains intron (7473843, 7474004) 2021-10-25 09:35:55.047 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0300477_exon_12') contains intron (7467050, 7467220) 2021-10-25 09:35:55.048 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0300478_exon_12') contains intron (7467050, 7467220) 2021-10-25 09:35:55.049 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0300479_exon_12') contains intron (7467050, 7467220) 2021-10-25 09:35:55.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0300480_exon_14') contains intron (7467050, 7467220) 2021-10-25 09:35:55.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0300481_exon_14') contains intron (7467050, 7467220) 2021-10-25 09:35:55.053 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0310676_exon_12') contains intron (7467050, 7467220) 2021-10-25 09:35:55.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030966: ['FBtr0074655'] 2021-10-25 09:35:55.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030966 has a single transcript. 2021-10-25 09:35:55.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7466878, 7467316, 'FBtr0336912_exon_12') contains intron (7467050, 7467220) 2021-10-25 09:35:55.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088993_exon_11', 'FBtr0088993_exon_1', 'FBtr0300477_exon_12', 'FBtr0300478_exon_12', 'FBtr0300479_exon_12', 'FBtr0300480_exon_14', 'FBtr0300481_exon_14', 'FBtr0310676_exon_12', 'FBtr0336912_exon_12'] 2021-10-25 09:35:55.055 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030968: ['FBtr0074654', 'FBtr0310441', 'FBtr0346018'] 2021-10-25 09:35:55.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034802: ['FBtr0071994', 'FBtr0303464'] 2021-10-25 09:35:55.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18856433, 18857068)] 2021-10-25 09:35:55.143 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.143 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22934970, 22935058)] 2021-10-25 09:35:55.147 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22934568, 22937077, 'FBtr0071994_exon_1') contains intron (22934970, 22935058) 2021-10-25 09:35:55.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071994_exon_1'] 2021-10-25 09:35:55.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034803: ['FBtr0071951', 'FBtr0302895'] 2021-10-25 09:35:55.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030969: ['FBtr0074643'] 2021-10-25 09:35:55.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030969 has a single transcript. 2021-10-25 09:35:55.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22937304, 22937735), (22938159, 22938489)] 2021-10-25 09:35:55.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030970: ['FBtr0074653', 'FBtr0333159'] 2021-10-25 09:35:55.335 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:55.336 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.354 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034804: ['FBtr0071993', 'FBtr0310325'] 2021-10-25 09:35:55.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22940058, 22940371), (22940529, 22940614), (22940668, 22940961)] 2021-10-25 09:35:55.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.414 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030973: ['FBtr0074647', 'FBtr0342877'] 2021-10-25 09:35:55.466 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18885174, 18885828), (18885962, 18886019), (18886743, 18886835), (18886995, 18887052), (18887212, 18887299)] 2021-10-25 09:35:55.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034807: ['FBtr0071989', 'FBtr0343186'] 2021-10-25 09:35:55.539 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22985850, 22985905)] 2021-10-25 09:35:55.540 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22985419, 22986339, 'FBtr0343186_exon_1') contains intron (22985850, 22985905) 2021-10-25 09:35:55.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343186_exon_1'] 2021-10-25 09:35:55.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030974: ['FBtr0074652', 'FBtr0342879', 'FBtr0342880'] 2021-10-25 09:35:55.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264002: ['FBtr0330358', 'FBtr0330359', 'FBtr0330360'] 2021-10-25 09:35:55.614 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034808: ['FBtr0071988'] 2021-10-25 09:35:55.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034808 has a single transcript. 2021-10-25 09:35:55.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034814: ['FBtr0071984'] 2021-10-25 09:35:55.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034814 has a single transcript. 2021-10-25 09:35:55.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034816: ['FBtr0071963', 'FBtr0310344'] 2021-10-25 09:35:55.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18889873, 18890066), (18890448, 18890740), (18890481, 18890545), (18890481, 18890740), (18891860, 18892042), (18892685, 18892758)] 2021-10-25 09:35:55.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010549: ['FBtr0302504', 'FBtr0332999'] 2021-10-25 09:35:55.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23074907, 23075072), (23075466, 23075530), (23075962, 23076019)] 2021-10-25 09:35:55.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2283036, 2297474), (2283248, 2297474), (2297723, 2298152), (2299273, 2299762)] 2021-10-25 09:35:55.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9390409, 9390497), (9390704, 9390843), (9390904, 9390965), (9391051, 9391111), (9391420, 9391476), (9391685, 9391745), (9393283, 9393343), (9393804, 9393862), (9394128, 9394188), (9395118, 9395182)] 2021-10-25 09:35:55.722 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9390164, 9390704, 'FBtr0302504_exon_1') contains intron (9390409, 9390497) 2021-10-25 09:35:55.722 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302504_exon_1'] 2021-10-25 09:35:55.723 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.730 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330359': ['FBtr0330360']} 2021-10-25 09:35:55.730 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330360']] 2021-10-25 09:35:55.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034817: ['FBtr0114564'] 2021-10-25 09:35:55.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034817 has a single transcript. 2021-10-25 09:35:55.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030975: ['FBtr0074648', 'FBtr0344973'] 2021-10-25 09:35:55.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034819: ['FBtr0071980'] 2021-10-25 09:35:55.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034819 has a single transcript. 2021-10-25 09:35:55.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034820: ['FBtr0071966'] 2021-10-25 09:35:55.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264005: ['FBtr0330385', 'FBtr0330386', 'FBtr0346339'] 2021-10-25 09:35:55.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034820 has a single transcript. 2021-10-25 09:35:55.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034821: ['FBtr0071979'] 2021-10-25 09:35:55.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034821 has a single transcript. 2021-10-25 09:35:55.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034822: ['FBtr0071978'] 2021-10-25 09:35:55.800 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034822 has a single transcript. 2021-10-25 09:35:55.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010551: ['FBtr0086614', 'FBtr0086615', 'FBtr0086616', 'FBtr0112861', 'FBtr0112862', 'FBtr0112863'] 2021-10-25 09:35:55.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034824: ['FBtr0071975'] 2021-10-25 09:35:55.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034824 has a single transcript. 2021-10-25 09:35:55.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034825: ['FBtr0071974'] 2021-10-25 09:35:55.813 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034825 has a single transcript. 2021-10-25 09:35:55.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034826: ['FBtr0071973'] 2021-10-25 09:35:55.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034826 has a single transcript. 2021-10-25 09:35:55.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18894893, 18895024), (18895898, 18895954)] 2021-10-25 09:35:55.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034827: ['FBtr0071968'] 2021-10-25 09:35:55.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034827 has a single transcript. 2021-10-25 09:35:55.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034828: ['FBtr0306080'] 2021-10-25 09:35:55.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034828 has a single transcript. 2021-10-25 09:35:55.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034829: ['FBtr0071969'] 2021-10-25 09:35:55.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034829 has a single transcript. 2021-10-25 09:35:55.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034833: ['FBtr0071998', 'FBtr0343195'] 2021-10-25 09:35:55.868 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17560193, 17565453), (17565563, 17567087)] 2021-10-25 09:35:55.869 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.869 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.886 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330385': ['FBtr0330386']} 2021-10-25 09:35:55.886 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330386']] 2021-10-25 09:35:55.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23184198, 23184411)] 2021-10-25 09:35:55.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030976: ['FBtr0074649', 'FBtr0113004', 'FBtr0342848'] 2021-10-25 09:35:55.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264006: ['FBtr0330414', 'FBtr0330416', 'FBtr0330417', 'FBtr0330418', 'FBtr0330419', 'FBtr0330420', 'FBtr0333021'] 2021-10-25 09:35:55.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034834: ['FBtr0072052'] 2021-10-25 09:35:55.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034834 has a single transcript. 2021-10-25 09:35:55.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18819501, 18819620), (18819524, 18819620), (18819765, 18820195), (18820542, 18820604), (18820838, 18821040), (18821118, 18821183), (18821283, 18821975), (18821283, 18821489), (18821637, 18821697)] 2021-10-25 09:35:55.984 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821183, 18821839, 'FBtr0086614_exon_6') contains intron (18821283, 18821489) 2021-10-25 09:35:55.985 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821183, 18821839, 'FBtr0086615_exon_6') contains intron (18821283, 18821489) 2021-10-25 09:35:55.985 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18819466, 18819765, 'FBtr0086616_exon_1') contains intron (18819501, 18819620) 2021-10-25 09:35:55.986 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821183, 18821637, 'FBtr0086616_exon_5') contains intron (18821283, 18821489) 2021-10-25 09:35:55.986 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821489, 18821839, 'FBtr0112861_exon_7') contains intron (18821637, 18821697) 2021-10-25 09:35:55.987 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18819466, 18819765, 'FBtr0112863_exon_1') contains intron (18819501, 18819620) 2021-10-25 09:35:55.987 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18821183, 18821839, 'FBtr0112863_exon_5') contains intron (18821283, 18821489) 2021-10-25 09:35:55.988 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086614_exon_6', 'FBtr0086615_exon_6', 'FBtr0086616_exon_1', 'FBtr0086616_exon_5', 'FBtr0112861_exon_7', 'FBtr0112863_exon_1', 'FBtr0112863_exon_5'] 2021-10-25 09:35:55.988 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18900567, 18900730), (18900960, 18906074), (18900960, 18907498), (18906134, 18907498), (18907668, 18907730), (18907859, 18908276), (18907859, 18908249), (18908374, 18908883)] 2021-10-25 09:35:55.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:55.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:55.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034835: ['FBtr0071999'] 2021-10-25 09:35:55.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034835 has a single transcript. 2021-10-25 09:35:55.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034837: ['FBtr0072049'] 2021-10-25 09:35:55.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034837 has a single transcript. 2021-10-25 09:35:56.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034838: ['FBtr0072048'] 2021-10-25 09:35:56.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034838 has a single transcript. 2021-10-25 09:35:56.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034839: ['FBtr0343196'] 2021-10-25 09:35:56.011 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034839 has a single transcript. 2021-10-25 09:35:56.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034840: ['FBtr0072046', 'FBtr0343198'] 2021-10-25 09:35:56.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23282959, 23283017), (23283076, 23283152), (23283103, 23283152), (23283853, 23283911)] 2021-10-25 09:35:56.072 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030979: ['FBtr0074663'] 2021-10-25 09:35:56.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030979 has a single transcript. 2021-10-25 09:35:56.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030980: ['FBtr0074664'] 2021-10-25 09:35:56.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030980 has a single transcript. 2021-10-25 09:35:56.140 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030981: ['FBtr0074665'] 2021-10-25 09:35:56.140 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030981 has a single transcript. 2021-10-25 09:35:56.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030982: ['FBtr0074704'] 2021-10-25 09:35:56.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030982 has a single transcript. 2021-10-25 09:35:56.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034841: ['FBtr0072001', 'FBtr0343197'] 2021-10-25 09:35:56.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030983: ['FBtr0074703'] 2021-10-25 09:35:56.154 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030983 has a single transcript. 2021-10-25 09:35:56.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030984: ['FBtr0290275', 'FBtr0344323'] 2021-10-25 09:35:56.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13872857, 13872921), (13873014, 13873071), (13873266, 13873921), (13873266, 13876377), (13874008, 13876377), (13874008, 13877623), (13876458, 13883263), (13877629, 13883263), (13883335, 13884035), (13883335, 13886079), (13884312, 13884704), (13884799, 13886079), (13886109, 13886170), (13886281, 13886362), (13886534, 13886600), (13886921, 13887169), (13887453, 13889548), (13887465, 13889548), (13889679, 13890814), (13890953, 13891248), (13892080, 13901684)] 2021-10-25 09:35:56.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23284844, 23284911), (23284848, 23284911)] 2021-10-25 09:35:56.207 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.208 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330414': ['FBtr0330418']} 2021-10-25 09:35:56.208 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330418']] 2021-10-25 09:35:56.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19125644, 19126005), (19126287, 19126354), (19126463, 19126759)] 2021-10-25 09:35:56.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.275 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010583: ['FBtr0078013', 'FBtr0078014', 'FBtr0078015', 'FBtr0332973'] 2021-10-25 09:35:56.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030985: ['FBtr0074701'] 2021-10-25 09:35:56.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030985 has a single transcript. 2021-10-25 09:35:56.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034842: ['FBtr0072045'] 2021-10-25 09:35:56.282 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034842 has a single transcript. 2021-10-25 09:35:56.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030989: ['FBtr0074698'] 2021-10-25 09:35:56.288 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030989 has a single transcript. 2021-10-25 09:35:56.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034844: ['FBtr0072002'] 2021-10-25 09:35:56.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034844 has a single transcript. 2021-10-25 09:35:56.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030990: ['FBtr0074697', 'FBtr0343313'] 2021-10-25 09:35:56.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034846: ['FBtr0290285'] 2021-10-25 09:35:56.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034846 has a single transcript. 2021-10-25 09:35:56.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034849: ['FBtr0072038', 'FBtr0329860'] 2021-10-25 09:35:56.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19177962, 19178039), (19178247, 19178999)] 2021-10-25 09:35:56.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.346 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23356670, 23356855), (23357157, 23357218)] 2021-10-25 09:35:56.359 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.384 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(826507, 829421), (826507, 829456), (826507, 829304), (829971, 830144), (830349, 830737), (831083, 831176), (831626, 831713)] 2021-10-25 09:35:56.386 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030991: ['FBtr0074666'] 2021-10-25 09:35:56.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030991 has a single transcript. 2021-10-25 09:35:56.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030992: ['FBtr0074668', 'FBtr0342978', 'FBtr0331155'] 2021-10-25 09:35:56.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034850: ['FBtr0072006', 'FBtr0301853'] 2021-10-25 09:35:56.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264075: ['FBtr0082005', 'FBtr0336755'] 2021-10-25 09:35:56.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23357834, 23357892), (23358178, 23358239)] 2021-10-25 09:35:56.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.493 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19183725, 19185689), (19185447, 19185689), (19186206, 19186277), (19186443, 19186533)] 2021-10-25 09:35:56.518 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.518 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.534 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0074668': ['FBtr0331155']} 2021-10-25 09:35:56.535 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331155']] 2021-10-25 09:35:56.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9019734, 9019876)] 2021-10-25 09:35:56.551 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.552 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010590: ['FBtr0087262'] 2021-10-25 09:35:56.553 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010590 has a single transcript. 2021-10-25 09:35:56.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034853: ['FBtr0072010'] 2021-10-25 09:35:56.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034853 has a single transcript. 2021-10-25 09:35:56.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010591: ['FBtr0087008', 'FBtr0087007'] 2021-10-25 09:35:56.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034854: ['FBtr0072036'] 2021-10-25 09:35:56.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034854 has a single transcript. 2021-10-25 09:35:56.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034856: ['FBtr0072012'] 2021-10-25 09:35:56.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034856 has a single transcript. 2021-10-25 09:35:56.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030993: ['FBtr0074669'] 2021-10-25 09:35:56.582 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030993 has a single transcript. 2021-10-25 09:35:56.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034858: ['FBtr0072013', 'FBtr0072014', 'FBtr0072015', 'FBtr0302315'] 2021-10-25 09:35:56.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030994: ['FBtr0074670'] 2021-10-25 09:35:56.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030994 has a single transcript. 2021-10-25 09:35:56.596 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030995: ['FBtr0074696'] 2021-10-25 09:35:56.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030995 has a single transcript. 2021-10-25 09:35:56.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030996: ['FBtr0074671', 'FBtr0336701'] 2021-10-25 09:35:56.619 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17088945, 17089004), (17089151, 17089209), (17089658, 17089713), (17090375, 17091358), (17091523, 17091809)] 2021-10-25 09:35:56.620 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.620 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264077: ['FBtr0074299'] 2021-10-25 09:35:56.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264077 has a single transcript. 2021-10-25 09:35:56.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264078: ['FBtr0330214', 'FBtr0330215', 'FBtr0073951', 'FBtr0330217', 'FBtr0330216', 'FBtr0073954', 'FBtr0073952', 'FBtr0073950', 'FBtr0300434', 'FBtr0300435', 'FBtr0073949', 'FBtr0347266'] 2021-10-25 09:35:56.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19193869, 19193947), (19194018, 19194423), (19194018, 19194495), (19194998, 19195058)] 2021-10-25 09:35:56.662 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010602: ['FBtr0078081', 'FBtr0078082', 'FBtr0310028', 'FBtr0310029'] 2021-10-25 09:35:56.715 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23386622, 23386789), (23386622, 23387006), (23386622, 23386941), (23386827, 23387006), (23387612, 23387671), (23388232, 23388288)] 2021-10-25 09:35:56.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030997: ['FBtr0074695', 'FBtr0345116', 'FBtr0308082'] 2021-10-25 09:35:56.808 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(541168, 541708), (542346, 542429), (542350, 542429), (542379, 542429)] 2021-10-25 09:35:56.810 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.810 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19198143, 19198230), (19198449, 19198516), (19198781, 19199272), (19199464, 19201463), (19199464, 19199826), (19199885, 19201463)] 2021-10-25 09:35:56.821 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:56.821 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:56.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034859: ['FBtr0072027'] 2021-10-25 09:35:56.895 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034859 has a single transcript. 2021-10-25 09:35:56.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034860: ['FBtr0072025', 'FBtr0343207', 'FBtr0306150'] 2021-10-25 09:35:57.032 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030998: ['FBtr0074692', 'FBtr0343593'] 2021-10-25 09:35:57.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23412794, 23413013), (23413133, 23413532), (23413133, 23414496), (23413793, 23414496), (23414765, 23414831), (23415000, 23419226), (23419295, 23419473)] 2021-10-25 09:35:57.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.080 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010607: ['FBtr0079051', 'FBtr0079050', 'FBtr0331229'] 2021-10-25 09:35:57.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19209128, 19209197), (19209546, 19209618), (19210340, 19210838), (19211148, 19211202)] 2021-10-25 09:35:57.089 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.111 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14839423, 14840872), (14839535, 14840872), (14840356, 14840872), (14841019, 14924225), (14924413, 14926765), (14924413, 14926735), (14924413, 14925645), (14925684, 14926765), (14925684, 14926735), (14926874, 14930746), (14930174, 14930436), (14930174, 14930746), (14930456, 14930746), (14931314, 14931801), (14931985, 14932047)] 2021-10-25 09:35:57.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.152 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330217': ['FBtr0073950']} 2021-10-25 09:35:57.152 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0073950']] 2021-10-25 09:35:57.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0030999: ['FBtr0074672'] 2021-10-25 09:35:57.162 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0030999 has a single transcript. 2021-10-25 09:35:57.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4970784, 4971053), (4970784, 4971086), (4971322, 4973718)] 2021-10-25 09:35:57.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.171 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031000: ['FBtr0074673', 'FBtr0346019'] 2021-10-25 09:35:57.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034861: ['FBtr0072024', 'FBtr0113111', 'FBtr0343263', 'FBtr0343264'] 2021-10-25 09:35:57.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:57.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010611: ['FBtr0087145', 'FBtr0087146', 'FBtr0087147', 'FBtr0087148', 'FBtr0087149', 'FBtr0340059'] 2021-10-25 09:35:57.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031001: ['FBtr0074674', 'FBtr0332392'] 2021-10-25 09:35:57.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23421894, 23421947), (23422271, 23422434), (23422566, 23431762), (23422566, 23433256), (23422566, 23425840), (23422566, 23422635)] 2021-10-25 09:35:57.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.357 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19221068, 19232268), (19234870, 19235002), (19234870, 19234999), (19235133, 19235313)] 2021-10-25 09:35:57.358 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19234999, 19235910, 'FBtr0074674_exon_3') contains intron (19235133, 19235313) 2021-10-25 09:35:57.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074674_exon_3'] 2021-10-25 09:35:57.359 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031002: ['FBtr0074691'] 2021-10-25 09:35:57.432 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031002 has a single transcript. 2021-10-25 09:35:57.440 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031003: ['FBtr0074675'] 2021-10-25 09:35:57.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031003 has a single transcript. 2021-10-25 09:35:57.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031004: ['FBtr0074690'] 2021-10-25 09:35:57.525 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031004 has a single transcript. 2021-10-25 09:35:57.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031005: ['FBtr0074676', 'FBtr0332533'] 2021-10-25 09:35:57.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16336863, 16339446), (16338421, 16339446), (16338436, 16339446), (16339197, 16339446)] 2021-10-25 09:35:57.547 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.547 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.601 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19249323, 19249738), (19250202, 19250753), (19251274, 19251450)] 2021-10-25 09:35:57.602 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19250753, 19252045, 'FBtr0074676_exon_3') contains intron (19251274, 19251450) 2021-10-25 09:35:57.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074676_exon_3'] 2021-10-25 09:35:57.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034863: ['FBtr0072022'] 2021-10-25 09:35:57.613 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034863 has a single transcript. 2021-10-25 09:35:57.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034865: ['FBtr0072021'] 2021-10-25 09:35:57.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034865 has a single transcript. 2021-10-25 09:35:57.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034866: ['FBtr0072020'] 2021-10-25 09:35:57.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034866 has a single transcript. 2021-10-25 09:35:57.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034867: ['FBtr0072019'] 2021-10-25 09:35:57.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034867 has a single transcript. 2021-10-25 09:35:57.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034869: ['FBtr0072056'] 2021-10-25 09:35:57.642 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034869 has a single transcript. 2021-10-25 09:35:57.649 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034870: ['FBtr0072057'] 2021-10-25 09:35:57.649 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034870 has a single transcript. 2021-10-25 09:35:57.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034871: ['FBtr0072121'] 2021-10-25 09:35:57.656 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034871 has a single transcript. 2021-10-25 09:35:57.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034876: ['FBtr0072114', 'FBtr0113112'] 2021-10-25 09:35:57.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031006: ['FBtr0074689', 'FBtr0343634', 'FBtr0343635'] 2021-10-25 09:35:57.719 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23545263, 23545325), (23545991, 23547489), (23547875, 23547983)] 2021-10-25 09:35:57.720 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23547489, 23547988, 'FBtr0072114_exon_1') contains intron (23547875, 23547983) 2021-10-25 09:35:57.721 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072114_exon_1'] 2021-10-25 09:35:57.721 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264081: ['FBtr0330686', 'FBtr0335464'] 2021-10-25 09:35:57.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19253744, 19253801), (19254531, 19254602), (19255521, 19255590), (19255715, 19255817), (19256606, 19256774), (19256983, 19257046), (19257223, 19257290), (19257358, 19257418), (19258154, 19258212), (19258366, 19258826), (19259372, 19259435), (19259646, 19260986), (19259646, 19259716)] 2021-10-25 09:35:57.772 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19257290, 19258154, 'FBtr0074689_exon_5') contains intron (19257358, 19257418) 2021-10-25 09:35:57.773 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19257290, 19258154, 'FBtr0343635_exon_5') contains intron (19257358, 19257418) 2021-10-25 09:35:57.773 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074689_exon_5', 'FBtr0343635_exon_5'] 2021-10-25 09:35:57.774 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:57.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.796 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034877: ['FBtr0072061', 'FBtr0343265'] 2021-10-25 09:35:57.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010612: ['FBtr0080167', 'FBtr0110872', 'FBtr0305994'] 2021-10-25 09:35:57.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23548386, 23548537)] 2021-10-25 09:35:57.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264083: ['FBtr0330691'] 2021-10-25 09:35:57.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264083 has a single transcript. 2021-10-25 09:35:57.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264084: ['FBtr0330688', 'FBtr0330689', 'FBtr0330690'] 2021-10-25 09:35:57.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034878: ['FBtr0072112', 'FBtr0072113'] 2021-10-25 09:35:57.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031008: ['FBtr0074688'] 2021-10-25 09:35:57.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031008 has a single transcript. 2021-10-25 09:35:57.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031010: ['FBtr0332393', 'FBtr0332394'] 2021-10-25 09:35:57.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10976161, 10976250), (10976305, 10976361)] 2021-10-25 09:35:57.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2272500, 2279629), (2276391, 2279629), (2279251, 2279629)] 2021-10-25 09:35:57.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10976250, 10976363, 'FBtr0080167_exon_1') contains intron (10976305, 10976361) 2021-10-25 09:35:57.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080167_exon_1'] 2021-10-25 09:35:57.978 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:57.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:57.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.013 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23549891, 23549947), (23551036, 23554254)] 2021-10-25 09:35:58.015 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.015 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.023 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19277564, 19277643), (19277764, 19277832), (19277977, 19278973), (19279987, 19280172)] 2021-10-25 09:35:58.024 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19278973, 19280349, 'FBtr0332394_exon_1') contains intron (19279987, 19280172) 2021-10-25 09:35:58.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332394_exon_1'] 2021-10-25 09:35:58.025 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034879: ['FBtr0072111', 'FBtr0343267'] 2021-10-25 09:35:58.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031011: ['FBtr0074684', 'FBtr0301226'] 2021-10-25 09:35:58.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010620: ['FBtr0086909'] 2021-10-25 09:35:58.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010620 has a single transcript. 2021-10-25 09:35:58.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264085: ['FBtr0335161', 'FBtr0330687'] 2021-10-25 09:35:58.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010621: ['FBtr0087987', 'FBtr0087988'] 2021-10-25 09:35:58.143 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23555628, 23555691)] 2021-10-25 09:35:58.145 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.145 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.145 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19282935, 19283001), (19283193, 19283356), (19284818, 19297115)] 2021-10-25 09:35:58.147 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.147 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2284325, 2284494), (2284325, 2284766)] 2021-10-25 09:35:58.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.169 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12175028, 12175736), (12175128, 12175736), (12176718, 12176777)] 2021-10-25 09:35:58.170 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.171 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034880: ['FBtr0072063'] 2021-10-25 09:35:58.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034880 has a single transcript. 2021-10-25 09:35:58.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031012: ['FBtr0074683', 'FBtr0343320'] 2021-10-25 09:35:58.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034882: ['FBtr0072071'] 2021-10-25 09:35:58.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034882 has a single transcript. 2021-10-25 09:35:58.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034883: ['FBtr0072107', 'FBtr0336928'] 2021-10-25 09:35:58.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010622: ['FBtr0071985', 'FBtr0336732'] 2021-10-25 09:35:58.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264086: ['FBtr0330695', 'FBtr0330696'] 2021-10-25 09:35:58.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19301723, 19301799), (19303092, 19303412), (19303539, 19303636), (19304094, 19305293), (19304094, 19307638)] 2021-10-25 09:35:58.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23061594, 23061682)] 2021-10-25 09:35:58.282 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23061419, 23062593, 'FBtr0071985_exon_1') contains intron (23061594, 23061682) 2021-10-25 09:35:58.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071985_exon_1'] 2021-10-25 09:35:58.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(326061, 328592)] 2021-10-25 09:35:58.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23604056, 23604392), (23604951, 23605077), (23604951, 23616510)] 2021-10-25 09:35:58.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.287 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031016: ['FBtr0074707', 'FBtr0074708', 'FBtr0309223', 'FBtr0309224'] 2021-10-25 09:35:58.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034884: ['FBtr0306160'] 2021-10-25 09:35:58.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034884 has a single transcript. 2021-10-25 09:35:58.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010638: ['FBtr0087498'] 2021-10-25 09:35:58.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010638 has a single transcript. 2021-10-25 09:35:58.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264087: ['FBtr0330697', 'FBtr0330698', 'FBtr0330699', 'FBtr0330700', 'FBtr0330701', 'FBtr0330702', 'FBtr0330703', 'FBtr0330704', 'FBtr0330705', 'FBtr0330706', 'FBtr0335491'] 2021-10-25 09:35:58.368 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034885: ['FBtr0072102', 'FBtr0072103', 'FBtr0072104', 'FBtr0072105', 'FBtr0306384', 'FBtr0336929'] 2021-10-25 09:35:58.369 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010651: ['FBtr0086634', 'FBtr0086635', 'FBtr0345426'] 2021-10-25 09:35:58.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18797655, 18797715), (18798792, 18799072), (18799263, 18802017), (18803283, 18803654)] 2021-10-25 09:35:58.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19353583, 19362966), (19353653, 19362966), (19363021, 19433153), (19363021, 19379212), (19379280, 19398502), (19398534, 19433153), (19433272, 19446272), (19433272, 19464192), (19446305, 19464192), (19466221, 19468306)] 2021-10-25 09:35:58.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.451 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23608051, 23608131), (23608681, 23614592), (23608681, 23614672), (23608681, 23609413), (23608681, 23614466), (23608681, 23608930)] 2021-10-25 09:35:58.544 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23608131, 23608942, 'FBtr0336929_exon_1') contains intron (23608681, 23608930) 2021-10-25 09:35:58.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336929_exon_1'] 2021-10-25 09:35:58.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.583 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010660: ['FBtr0071996'] 2021-10-25 09:35:58.583 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010660 has a single transcript. 2021-10-25 09:35:58.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010741: ['FBtr0076238', 'FBtr0332708'] 2021-10-25 09:35:58.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031018: ['FBtr0074710'] 2021-10-25 09:35:58.632 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031018 has a single transcript. 2021-10-25 09:35:58.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031020: ['FBtr0074711', 'FBtr0346014'] 2021-10-25 09:35:58.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11074011, 11074115)] 2021-10-25 09:35:58.646 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.647 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.694 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19480678, 19481017), (19481506, 19481597), (19482385, 19482451), (19482879, 19482951), (19483604, 19483683)] 2021-10-25 09:35:58.696 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.696 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.700 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7644774, 7644923), (7644786, 7644923), (7646010, 7648746), (7646010, 7646942), (7647266, 7648746), (7648889, 7648957), (7649083, 7649188), (7649083, 7649303), (7649200, 7649303), (7649514, 7650970), (7651152, 7651237), (7651474, 7651535), (7651743, 7655053), (7651743, 7655544), (7651743, 7661697), (7655221, 7655544), (7655664, 7655999), (7656463, 7661697), (7656463, 7656678), (7656463, 7657184), (7656463, 7659191), (7656742, 7659191), (7657235, 7659191), (7661774, 7662788), (7662874, 7674438), (7674856, 7675011)] 2021-10-25 09:35:58.702 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7674438, 7675078, 'FBtr0330698_exon_1') contains intron (7674856, 7675011) 2021-10-25 09:35:58.705 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7674438, 7675078, 'FBtr0330706_exon_1') contains intron (7674856, 7675011) 2021-10-25 09:35:58.706 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7674438, 7675078, 'FBtr0335491_exon_1') contains intron (7674856, 7675011) 2021-10-25 09:35:58.706 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0330698_exon_1', 'FBtr0330706_exon_1', 'FBtr0335491_exon_1'] 2021-10-25 09:35:58.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010747: ['FBtr0077169'] 2021-10-25 09:35:58.718 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010747 has a single transcript. 2021-10-25 09:35:58.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010750: ['FBtr0078868', 'FBtr0334899'] 2021-10-25 09:35:58.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031021: ['FBtr0074712'] 2021-10-25 09:35:58.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031021 has a single transcript. 2021-10-25 09:35:58.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4750054, 4750793), (4750886, 4750948), (4751076, 4775574), (4775779, 4775837), (4776804, 4776863)] 2021-10-25 09:35:58.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031022: ['FBtr0074783'] 2021-10-25 09:35:58.785 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031022 has a single transcript. 2021-10-25 09:35:58.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:58.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031023: ['FBtr0074721', 'FBtr0307195', 'FBtr0307196'] 2021-10-25 09:35:58.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034887: ['FBtr0114541'] 2021-10-25 09:35:58.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034887 has a single transcript. 2021-10-25 09:35:58.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034893: ['FBtr0072084'] 2021-10-25 09:35:58.848 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034893 has a single transcript. 2021-10-25 09:35:58.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010762: ['FBtr0076262', 'FBtr0076263', 'FBtr0076264', 'FBtr0331573', 'FBtr0331574'] 2021-10-25 09:35:58.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034894: ['FBtr0072096', 'FBtr0072097', 'FBtr0072098'] 2021-10-25 09:35:58.871 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19496183, 19509817), (19510130, 19510201), (19510278, 19511112), (19511345, 19511396), (19511345, 19511399), (19515644, 19515912)] 2021-10-25 09:35:58.872 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19511112, 19515644, 'FBtr0074721_exon_4') contains intron (19511345, 19511396) 2021-10-25 09:35:58.873 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074721_exon_4'] 2021-10-25 09:35:58.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.934 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23700240, 23700297), (23700590, 23700800), (23700590, 23702110), (23700869, 23702110)] 2021-10-25 09:35:58.935 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23700297, 23700862, 'FBtr0072098_exon_1') contains intron (23700590, 23700800) 2021-10-25 09:35:58.935 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072098_exon_1'] 2021-10-25 09:35:58.936 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:58.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10664808, 10665049), (10665370, 10685009), (10685894, 10685963), (10686261, 10687075), (10686261, 10687051), (10687162, 10687237), (10687339, 10687404), (10687603, 10687664), (10688597, 10688690), (10688597, 10688678), (10688780, 10688925), (10688843, 10688925)] 2021-10-25 09:35:58.996 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10664738, 10665370, 'FBtr0076263_exon_1') contains intron (10664808, 10665049) 2021-10-25 09:35:58.996 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10664738, 10665370, 'FBtr0076264_exon_1') contains intron (10664808, 10665049) 2021-10-25 09:35:58.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10664738, 10665370, 'FBtr0331573_exon_1') contains intron (10664808, 10665049) 2021-10-25 09:35:58.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10664738, 10665370, 'FBtr0331574_exon_1') contains intron (10664808, 10665049) 2021-10-25 09:35:58.998 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076263_exon_1', 'FBtr0076264_exon_1', 'FBtr0331573_exon_1', 'FBtr0331574_exon_1'] 2021-10-25 09:35:58.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031026: ['FBtr0074779'] 2021-10-25 09:35:59.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031026 has a single transcript. 2021-10-25 09:35:59.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031030: ['FBtr0074771', 'FBtr0074772', 'FBtr0074773', 'FBtr0074774', 'FBtr0309237', 'FBtr0303999', 'FBtr0304000', 'FBtr0336691', 'FBtr0336692'] 2021-10-25 09:35:59.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034897: ['FBtr0072087', 'FBtr0113113', 'FBtr0113114', 'FBtr0343268'] 2021-10-25 09:35:59.193 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23714074, 23714665), (23714118, 23714665), (23714118, 23714680), (23714899, 23729048), (23714899, 23722209), (23722875, 23729048), (23729234, 23730908), (23731091, 23731156), (23731529, 23731652), (23731971, 23732036), (23732220, 23732392), (23732503, 23732561)] 2021-10-25 09:35:59.196 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.196 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010768: ['FBtr0083733'] 2021-10-25 09:35:59.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010768 has a single transcript. 2021-10-25 09:35:59.242 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010770: ['FBtr0084012'] 2021-10-25 09:35:59.243 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010770 has a single transcript. 2021-10-25 09:35:59.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010772: ['FBtr0078728', 'FBtr0334951', 'FBtr0334952'] 2021-10-25 09:35:59.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264089: ['FBtr0330729', 'FBtr0330730', 'FBtr0330731', 'FBtr0330732', 'FBtr0330733', 'FBtr0330734'] 2021-10-25 09:35:59.296 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19571704, 19571774), (19571893, 19571965), (19572187, 19572251), (19572425, 19572496), (19572613, 19572677), (19572800, 19572865), (19573228, 19573290), (19573464, 19575357), (19573464, 19573603), (19574974, 19575357), (19575969, 19576038), (19576392, 19576694), (19576395, 19576694), (19577199, 19577264), (19577594, 19579397), (19577594, 19579747), (19577594, 19577901)] 2021-10-25 09:35:59.298 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19573290, 19573874, 'FBtr0074773_exon_1') contains intron (19573464, 19573603) 2021-10-25 09:35:59.298 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19574784, 19575969, 'FBtr0309237_exon_5') contains intron (19574974, 19575357) 2021-10-25 09:35:59.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074773_exon_1', 'FBtr0309237_exon_5'] 2021-10-25 09:35:59.300 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.334 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5665975, 5666067), (5666127, 5666197), (5666145, 5666197), (5666257, 5666329), (5666961, 5667097), (5667305, 5667692), (5667388, 5667692), (5667950, 5668009), (5668470, 5668626)] 2021-10-25 09:35:59.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034898: ['FBtr0072094'] 2021-10-25 09:35:59.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034898 has a single transcript. 2021-10-25 09:35:59.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034899: ['FBtr0072088', 'FBtr0345534'] 2021-10-25 09:35:59.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:35:59.439 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15873465, 15873534), (15873677, 15874289), (15873677, 15874322), (15874449, 15874511), (15876036, 15876100), (15876244, 15877030), (15877102, 15877171), (15877540, 15879060), (15879132, 15879395), (15879614, 15879698), (15879852, 15879921), (15880079, 15881366), (15881582, 15882568), (15882712, 15882793), (15882935, 15884334), (15884570, 15885344), (15885488, 15886098), (15885488, 15885584), (15885656, 15886098), (15886170, 15886243), (15886315, 15890289), (15891280, 15907171), (15891280, 15921638), (15907233, 15921638)] 2021-10-25 09:35:59.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010774: ['FBtr0081642'] 2021-10-25 09:35:59.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010774 has a single transcript. 2021-10-25 09:35:59.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010786: ['FBtr0072679'] 2021-10-25 09:35:59.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010786 has a single transcript. 2021-10-25 09:35:59.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010803: ['FBtr0081981'] 2021-10-25 09:35:59.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010803 has a single transcript. 2021-10-25 09:35:59.483 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330731': ['FBtr0330734']} 2021-10-25 09:35:59.484 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330734']] 2021-10-25 09:35:59.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010808: ['FBtr0085745'] 2021-10-25 09:35:59.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010808 has a single transcript. 2021-10-25 09:35:59.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010812: ['FBtr0081788', 'FBtr0347497'] 2021-10-25 09:35:59.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034900: ['FBtr0072089'] 2021-10-25 09:35:59.522 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034900 has a single transcript. 2021-10-25 09:35:59.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034901: ['FBtr0072090'] 2021-10-25 09:35:59.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034901 has a single transcript. 2021-10-25 09:35:59.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034902: ['FBtr0072091', 'FBtr0345535'] 2021-10-25 09:35:59.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8033530, 8033587), (8034880, 8034939)] 2021-10-25 09:35:59.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23752905, 23752964)] 2021-10-25 09:35:59.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.593 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010825: ['FBtr0076616', 'FBtr0076618', 'FBtr0076619', 'FBtr0305696', 'FBtr0305697', 'FBtr0305698', 'FBtr0305699', 'FBtr0333048', 'FBtr0333049'] 2021-10-25 09:35:59.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034903: ['FBtr0100329', 'FBtr0290120', 'FBtr0310328', 'FBtr0310329', 'FBtr0310330'] 2021-10-25 09:35:59.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264090: ['FBtr0331156', 'FBtr0331157', 'FBtr0343982', 'FBtr0332994'] 2021-10-25 09:35:59.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031031: ['FBtr0308568', 'FBtr0308569'] 2021-10-25 09:35:59.784 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19580934, 19580995), (19580934, 19581012)] 2021-10-25 09:35:59.785 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.785 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18931000, 18987175), (18931000, 18936606), (18936769, 18987175), (18987257, 19004586), (19004642, 19010973), (19011684, 19011752), (19013399, 19025614)] 2021-10-25 09:35:59.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23754337, 23755494), (23754337, 23756363), (23754337, 23757414), (23756551, 23757414), (23757166, 23757414), (23757494, 23757694), (23757926, 23757986), (23758151, 23758475), (23758602, 23759725), (23758602, 23760621), (23759781, 23760852), (23760674, 23760852), (23760995, 23767334), (23767439, 23768144), (23768407, 23768946), (23769076, 23779015), (23779111, 23785911), (23786355, 23791995), (23792119, 23797396)] 2021-10-25 09:35:59.827 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.836 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331156': ['FBtr0331157']} 2021-10-25 09:35:59.837 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331157']] 2021-10-25 09:35:59.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031032: ['FBtr0074729', 'FBtr0336898'] 2021-10-25 09:35:59.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8450457, 8461971), (8450457, 8451774), (8450687, 8451774), (8452128, 8461971), (8462088, 8463003), (8462103, 8463003), (8463237, 8463300), (8468074, 8468134), (8468258, 8468338), (8468483, 8468546), (8468483, 8468543), (8468704, 8469409), (8468704, 8468866), (8468923, 8469409), (8469493, 8469564), (8469682, 8470087), (8469682, 8470153), (8469691, 8470087), (8469691, 8470153), (8470187, 8470284), (8470379, 8470439), (8470379, 8470430), (8470483, 8471151), (8470483, 8470754), (8471039, 8471151)] 2021-10-25 09:35:59.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.906 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19583939, 19583998), (19584371, 19584429), (19584503, 19584576), (19584892, 19584956), (19585173, 19585464), (19585646, 19585704), (19586176, 19586246)] 2021-10-25 09:35:59.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:35:59.914 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:35:59.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264253: ['FBtr0080642'] 2021-10-25 09:35:59.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264253 has a single transcript. 2021-10-25 09:35:59.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264260: ['FBtr0331279'] 2021-10-25 09:35:59.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264260 has a single transcript. 2021-10-25 09:35:59.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264261: ['FBtr0331272', 'FBtr0331273'] 2021-10-25 09:35:59.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031033: ['FBtr0074769'] 2021-10-25 09:35:59.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031033 has a single transcript. 2021-10-25 09:36:00.003 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031034: ['FBtr0074730'] 2021-10-25 09:36:00.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031034 has a single transcript. 2021-10-25 09:36:00.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031036: ['FBtr0074768', 'FBtr0307162'] 2021-10-25 09:36:00.017 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15522851, 15522925), (15523203, 15523260), (15523373, 15523430)] 2021-10-25 09:36:00.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15522925, 15523373, 'FBtr0331272_exon_2') contains intron (15523203, 15523260) 2021-10-25 09:36:00.019 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15523260, 15523993, 'FBtr0331273_exon_3') contains intron (15523373, 15523430) 2021-10-25 09:36:00.020 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331272_exon_2', 'FBtr0331273_exon_3'] 2021-10-25 09:36:00.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.061 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19600561, 19600635), (19601344, 19601403), (19601512, 19601611)] 2021-10-25 09:36:00.063 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.063 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034904: ['FBtr0072245'] 2021-10-25 09:36:00.069 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034904 has a single transcript. 2021-10-25 09:36:00.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034906: ['FBtr0343271'] 2021-10-25 09:36:00.078 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034906 has a single transcript. 2021-10-25 09:36:00.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034907: ['FBtr0072123', 'FBtr0343269'] 2021-10-25 09:36:00.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264262: ['FBtr0331274'] 2021-10-25 09:36:00.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264262 has a single transcript. 2021-10-25 09:36:00.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264263: ['FBtr0331275'] 2021-10-25 09:36:00.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264263 has a single transcript. 2021-10-25 09:36:00.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264264: ['FBtr0332375'] 2021-10-25 09:36:00.118 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264264 has a single transcript. 2021-10-25 09:36:00.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264265: ['FBtr0331296'] 2021-10-25 09:36:00.125 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264265 has a single transcript. 2021-10-25 09:36:00.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264266: ['FBtr0331283'] 2021-10-25 09:36:00.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264266 has a single transcript. 2021-10-25 09:36:00.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264267: ['FBtr0331290'] 2021-10-25 09:36:00.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264267 has a single transcript. 2021-10-25 09:36:00.139 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:00.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031037: ['FBtr0074733', 'FBtr0074734', 'FBtr0307161', 'FBtr0345918'] 2021-10-25 09:36:00.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264268: ['FBtr0331291'] 2021-10-25 09:36:00.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264268 has a single transcript. 2021-10-25 09:36:00.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264269: ['FBtr0331293'] 2021-10-25 09:36:00.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264269 has a single transcript. 2021-10-25 09:36:00.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264270: ['FBtr0331247', 'FBtr0331249', 'FBtr0331250', 'FBtr0331251', 'FBtr0331253', 'FBtr0331254', 'FBtr0331255', 'FBtr0331256', 'FBtr0331257', 'FBtr0331258', 'FBtr0331259', 'FBtr0331260', 'FBtr0331261', 'FBtr0331262', 'FBtr0331263', 'FBtr0331264', 'FBtr0331265', 'FBtr0331266', 'FBtr0331268', 'FBtr0331270', 'FBtr0331271', 'FBtr0336727', 'FBtr0336728', 'FBtr0336729', 'FBtr0346796'] 2021-10-25 09:36:00.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034908: ['FBtr0072124'] 2021-10-25 09:36:00.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034908 has a single transcript. 2021-10-25 09:36:00.224 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034909: ['FBtr0072239'] 2021-10-25 09:36:00.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034909 has a single transcript. 2021-10-25 09:36:00.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034910: ['FBtr0072238'] 2021-10-25 09:36:00.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034910 has a single transcript. 2021-10-25 09:36:00.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034911: ['FBtr0301162'] 2021-10-25 09:36:00.240 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034911 has a single transcript. 2021-10-25 09:36:00.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034913: ['FBtr0072236'] 2021-10-25 09:36:00.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034913 has a single transcript. 2021-10-25 09:36:00.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19605682, 19610380), (19605682, 19609462), (19609489, 19610380), (19610254, 19610380), (19610462, 19610527), (19610623, 19610695)] 2021-10-25 09:36:00.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.253 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034914: ['FBtr0072126', 'FBtr0343273'] 2021-10-25 09:36:00.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23845331, 23845534), (23845696, 23845765), (23845940, 23846127), (23845940, 23846106)] 2021-10-25 09:36:00.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.338 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010830: ['FBtr0078535'] 2021-10-25 09:36:00.339 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010830 has a single transcript. 2021-10-25 09:36:00.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010877: ['FBtr0083595', 'FBtr0083596', 'FBtr0334313', 'FBtr0334314'] 2021-10-25 09:36:00.391 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034915: ['FBtr0072235'] 2021-10-25 09:36:00.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034915 has a single transcript. 2021-10-25 09:36:00.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034918: ['FBtr0072233'] 2021-10-25 09:36:00.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034918 has a single transcript. 2021-10-25 09:36:00.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034919: ['FBtr0072128'] 2021-10-25 09:36:00.410 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034919 has a single transcript. 2021-10-25 09:36:00.409 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031038: ['FBtr0074736', 'FBtr0346616', 'FBtr0346617'] 2021-10-25 09:36:00.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034920: ['FBtr0072131'] 2021-10-25 09:36:00.416 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034920 has a single transcript. 2021-10-25 09:36:00.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034921: ['FBtr0072223', 'FBtr0301648'] 2021-10-25 09:36:00.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18289707, 18289765), (18290020, 18290079), (18291503, 18298123), (18291503, 18291654), (18291503, 18294667), (18291503, 18292554)] 2021-10-25 09:36:00.456 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.456 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:00.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.477 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19611943, 19612011), (19612199, 19612287), (19612875, 19612964), (19612885, 19612964), (19613307, 19613631), (19613307, 19613912), (19614143, 19614212), (19614382, 19614441), (19614951, 19615023), (19615105, 19615183)] 2021-10-25 09:36:00.496 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19612287, 19613307, 'FBtr0346617_exon_3') contains intron (19612875, 19612964) 2021-10-25 09:36:00.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346617_exon_3'] 2021-10-25 09:36:00.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034923: ['FBtr0072221', 'FBtr0343302'] 2021-10-25 09:36:00.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23893418, 23893474), (23894617, 23894674)] 2021-10-25 09:36:00.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031039: ['FBtr0074737', 'FBtr0074738', 'FBtr0074739', 'FBtr0344069'] 2021-10-25 09:36:00.632 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010894: ['FBtr0077136'] 2021-10-25 09:36:00.633 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0010894 has a single transcript. 2021-10-25 09:36:00.657 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010905: ['FBtr0304613', 'FBtr0304614', 'FBtr0304615', 'FBtr0304616', 'FBtr0304617', 'FBtr0304618', 'FBtr0304619', 'FBtr0304620', 'FBtr0304621', 'FBtr0345046', 'FBtr0345047'] 2021-10-25 09:36:00.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034924: ['FBtr0072133'] 2021-10-25 09:36:00.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034924 has a single transcript. 2021-10-25 09:36:00.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034925: ['FBtr0072220'] 2021-10-25 09:36:00.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034925 has a single transcript. 2021-10-25 09:36:00.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034928: ['FBtr0072135', 'FBtr0305988'] 2021-10-25 09:36:00.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23903970, 23904034), (23904241, 23904304), (23904377, 23904429), (23904605, 23904662)] 2021-10-25 09:36:00.766 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23903749, 23904241, 'FBtr0072135_exon_1') contains intron (23903970, 23904034) 2021-10-25 09:36:00.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19611943, 19612011), (19612199, 19612287), (19612875, 19612964), (19612885, 19612964), (19613307, 19613631), (19613307, 19613912), (19614143, 19614212), (19614382, 19614441), (19614951, 19615023), (19615105, 19615183)] 2021-10-25 09:36:00.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072135_exon_1'] 2021-10-25 09:36:00.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19612287, 19613307, 'FBtr0074738_exon_3') contains intron (19612875, 19612964) 2021-10-25 09:36:00.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074738_exon_3'] 2021-10-25 09:36:00.768 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034931: ['FBtr0072140'] 2021-10-25 09:36:00.843 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034931 has a single transcript. 2021-10-25 09:36:00.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034933: ['FBtr0072210', 'FBtr0343280'] 2021-10-25 09:36:00.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23938603, 23938658), (23939363, 23939420)] 2021-10-25 09:36:00.903 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.903 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7079367, 7084598), (7079367, 7080988), (7081054, 7084598), (7084819, 7085157), (7085339, 7085409), (7085517, 7085618), (7085954, 7087613), (7085978, 7087613), (7087659, 7092696), (7087659, 7090133), (7087659, 7088577), (7087659, 7091673), (7087683, 7090133), (7088749, 7096814), (7088749, 7091673), (7088767, 7096902), (7088767, 7091673), (7090504, 7098000), (7092122, 7097944), (7092122, 7096997), (7092122, 7098000), (7092170, 7097944), (7092170, 7096997), (7092170, 7098000), (7096935, 7096997), (7097059, 7097623), (7097059, 7098000)] 2021-10-25 09:36:00.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031040: ['FBtr0074740', 'FBtr0344070'] 2021-10-25 09:36:00.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:00.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034935: ['FBtr0072209', 'FBtr0331981', 'FBtr0345932'] 2021-10-25 09:36:00.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2508573, 2508638), (2508865, 2511162), (2508865, 2509363), (2508907, 2511162), (2508907, 2509363), (2509500, 2511162), (2509500, 2509761), (2510557, 2511162), (2510575, 2511162), (2511763, 2511877), (2511763, 2512148), (2511763, 2512294), (2511931, 2512294), (2512157, 2512294), (2512472, 2512531), (2512481, 2512531), (2512731, 2512792), (2513145, 2513208), (2513638, 2513695), (2514197, 2524598), (2514197, 2514309), (2514330, 2524598), (2525718, 2534710), (2536218, 2536515), (2536218, 2540976), (2541403, 2554057)] 2021-10-25 09:36:00.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:00.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19616406, 19616469)] 2021-10-25 09:36:01.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.022 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331251': ['FBtr0331270'], 'FBtr0331264': ['FBtr0331271']} 2021-10-25 09:36:01.023 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331270'], ['FBtr0331271']] 2021-10-25 09:36:01.071 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23947340, 23947615), (23947652, 23948351), (23948195, 23948351), (23948397, 23948488)] 2021-10-25 09:36:01.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031041: ['FBtr0100291', 'FBtr0332487', 'FBtr0344071'] 2021-10-25 09:36:01.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19618187, 19618249), (19618295, 19618404), (19618345, 19618404)] 2021-10-25 09:36:01.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034936: ['FBtr0072145', 'FBtr0331980'] 2021-10-25 09:36:01.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23949476, 23949541), (23949643, 23949714), (23949922, 23949982), (23950182, 23950244), (23950389, 23950453), (23950569, 23952152)] 2021-10-25 09:36:01.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.261 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031042: ['FBtr0290086', 'FBtr0332485'] 2021-10-25 09:36:01.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034937: ['FBtr0072146'] 2021-10-25 09:36:01.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034937 has a single transcript. 2021-10-25 09:36:01.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034938: ['FBtr0072208'] 2021-10-25 09:36:01.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034938 has a single transcript. 2021-10-25 09:36:01.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034939: ['FBtr0072147'] 2021-10-25 09:36:01.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034939 has a single transcript. 2021-10-25 09:36:01.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19619123, 19619183), (19619391, 19619474), (19619925, 19619993), (19620633, 19620711), (19620783, 19620853), (19620957, 19621027)] 2021-10-25 09:36:01.352 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19620853, 19621118, 'FBtr0290086_exon_1') contains intron (19620957, 19621027) 2021-10-25 09:36:01.353 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290086_exon_1'] 2021-10-25 09:36:01.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034940: ['FBtr0072207'] 2021-10-25 09:36:01.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034940 has a single transcript. 2021-10-25 09:36:01.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034942: ['FBtr0306797'] 2021-10-25 09:36:01.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034942 has a single transcript. 2021-10-25 09:36:01.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034943: ['FBtr0072150'] 2021-10-25 09:36:01.370 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034943 has a single transcript. 2021-10-25 09:36:01.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034945: ['FBtr0072205', 'FBtr0343289'] 2021-10-25 09:36:01.426 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23969532, 23969595)] 2021-10-25 09:36:01.427 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.428 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031043: ['FBtr0074763', 'FBtr0332482', 'FBtr0332483', 'FBtr0332484'] 2021-10-25 09:36:01.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034946: ['FBtr0072153', 'FBtr0072154', 'FBtr0072155'] 2021-10-25 09:36:01.558 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19621650, 19622202), (19621650, 19621767), (19621650, 19621776), (19621664, 19621776), (19622264, 19622334), (19622471, 19622536), (19622666, 19622728), (19622844, 19622912)] 2021-10-25 09:36:01.560 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.560 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010909: ['FBtr0072956', 'FBtr0072957', 'FBtr0072958', 'FBtr0072959', 'FBtr0333362', 'FBtr0333363', 'FBtr0333364', 'FBtr0333365'] 2021-10-25 09:36:01.591 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23970593, 23970652), (23970685, 23970755)] 2021-10-25 09:36:01.592 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23970304, 23970685, 'FBtr0072153_exon_1') contains intron (23970593, 23970652) 2021-10-25 09:36:01.592 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23970652, 23972020, 'FBtr0072154_exon_2') contains intron (23970685, 23970755) 2021-10-25 09:36:01.593 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23970304, 23972233, 'FBtr0072155_exon_1') contains intron (23970593, 23970652) 2021-10-25 09:36:01.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072153_exon_1', 'FBtr0072154_exon_2', 'FBtr0072155_exon_1'] 2021-10-25 09:36:01.593 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034948: ['FBtr0072204'] 2021-10-25 09:36:01.707 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034948 has a single transcript. 2021-10-25 09:36:01.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034950: ['FBtr0072160'] 2021-10-25 09:36:01.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034950 has a single transcript. 2021-10-25 09:36:01.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034951: ['FBtr0072201', 'FBtr0343288'] 2021-10-25 09:36:01.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031044: ['FBtr0074741', 'FBtr0332481'] 2021-10-25 09:36:01.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23992574, 23992634), (23992858, 23992927), (23993053, 23993108), (23993053, 23993114), (23993316, 23993380), (23993578, 23993638), (23993897, 23994249), (23994470, 23994532), (23994744, 23994827)] 2021-10-25 09:36:01.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19623354, 19623416), (19623548, 19623614), (19623714, 19623779), (19624462, 19624527)] 2021-10-25 09:36:01.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.794 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2556729, 2556791), (2556866, 2556941), (2557070, 2557135), (2557076, 2557135), (2557285, 2557340), (2557508, 2557571), (2557727, 2557792), (2558032, 2560115), (2558035, 2560115), (2558389, 2560115), (2560295, 2563817), (2560295, 2561931), (2562843, 2563817), (2563959, 2564396), (2564695, 2565600), (2564755, 2566201), (2564755, 2565600), (2565621, 2566201), (2566375, 2566433), (2566933, 2567045), (2567288, 2567369), (2567814, 2579454), (2579520, 2585604), (2585732, 2586402), (2585732, 2586413), (2585738, 2586265), (2585738, 2586036), (2585738, 2586402)] 2021-10-25 09:36:01.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.858 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034956: ['FBtr0072197', 'FBtr0343347'] 2021-10-25 09:36:01.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031045: ['FBtr0074742'] 2021-10-25 09:36:01.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031045 has a single transcript. 2021-10-25 09:36:01.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031047: ['FBtr0074743', 'FBtr0074744', 'FBtr0334277'] 2021-10-25 09:36:01.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24015258, 24015320), (24015715, 24015767), (24015839, 24015901), (24016027, 24016085), (24016149, 24016209), (24016334, 24016389), (24016646, 24016703), (24016822, 24016959), (24016831, 24016959)] 2021-10-25 09:36:01.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:01.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.962 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19639076, 19639144), (19639393, 19639454), (19639393, 19639445), (19639820, 19639895), (19640090, 19640147), (19640239, 19640301)] 2021-10-25 09:36:01.964 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19638888, 19639393, 'FBtr0074744_exon_1') contains intron (19639076, 19639144) 2021-10-25 09:36:01.964 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19638766, 19639393, 'FBtr0334277_exon_1') contains intron (19639076, 19639144) 2021-10-25 09:36:01.965 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074744_exon_1', 'FBtr0334277_exon_1'] 2021-10-25 09:36:01.965 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:01.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034957: ['FBtr0072161'] 2021-10-25 09:36:01.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034957 has a single transcript. 2021-10-25 09:36:01.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034958: ['FBtr0072195', 'FBtr0072196'] 2021-10-25 09:36:02.055 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24020321, 24020383), (24020509, 24020565), (24020697, 24020754), (24020940, 24021002), (24021319, 24021375), (24021541, 24021789), (24022111, 24022232)] 2021-10-25 09:36:02.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.057 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031048: ['FBtr0074761'] 2021-10-25 09:36:02.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031048 has a single transcript. 2021-10-25 09:36:02.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031049: ['FBtr0074745', 'FBtr0340610', 'FBtr0344986'] 2021-10-25 09:36:02.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264271: ['FBtr0331391'] 2021-10-25 09:36:02.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264271 has a single transcript. 2021-10-25 09:36:02.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264272: ['FBtr0331392', 'FBtr0331393', 'FBtr0336737'] 2021-10-25 09:36:02.129 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034959: ['FBtr0072162'] 2021-10-25 09:36:02.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034959 has a single transcript. 2021-10-25 09:36:02.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034961: ['FBtr0072165'] 2021-10-25 09:36:02.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034961 has a single transcript. 2021-10-25 09:36:02.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034962: ['FBtr0072166', 'FBtr0072167', 'FBtr0345949'] 2021-10-25 09:36:02.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19643464, 19643864)] 2021-10-25 09:36:02.182 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1201315, 1206027), (1206432, 1206527), (1206432, 1206530), (1206785, 1229529), (1209100, 1229529), (1229791, 1229859), (1230035, 1230092), (1230206, 1230259), (1230448, 1230508), (1230841, 1230901)] 2021-10-25 09:36:02.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.239 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24034420, 24034687), (24034432, 24034687)] 2021-10-25 09:36:02.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0010926: ['FBtr0083504', 'FBtr0347218'] 2021-10-25 09:36:02.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17537294, 17537355), (17539306, 17539361)] 2021-10-25 09:36:02.314 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.315 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031050: ['FBtr0074760', 'FBtr0345991'] 2021-10-25 09:36:02.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264273: ['FBtr0290009', 'FBtr0329992', 'FBtr0329991', 'FBtr0100001'] 2021-10-25 09:36:02.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19645582, 19645632), (19645785, 19645845)] 2021-10-25 09:36:02.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034963: ['FBtr0072189', 'FBtr0072190', 'FBtr0343345'] 2021-10-25 09:36:02.390 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011016: ['FBtr0075453'] 2021-10-25 09:36:02.391 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011016 has a single transcript. 2021-10-25 09:36:02.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011020: ['FBtr0081569'] 2021-10-25 09:36:02.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011020 has a single transcript. 2021-10-25 09:36:02.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011202: ['FBtr0081410', 'FBtr0081411', 'FBtr0305960', 'FBtr0305961', 'FBtr0335145'] 2021-10-25 09:36:02.446 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031051: ['FBtr0074759', 'FBtr0340614'] 2021-10-25 09:36:02.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24036914, 24036974), (24037140, 24037200), (24037340, 24037394)] 2021-10-25 09:36:02.464 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24036719, 24037140, 'FBtr0072190_exon_3') contains intron (24036914, 24036974) 2021-10-25 09:36:02.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072190_exon_3'] 2021-10-25 09:36:02.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16386750, 16398828), (16399421, 16420280), (16420368, 16421680), (16421732, 16422679), (16422748, 16423013), (16422748, 16423016), (16423124, 16423450), (16423588, 16424037), (16424170, 16424294), (16424651, 16425740), (16425969, 16426494), (16426998, 16427757), (16427910, 16428423), (16428532, 16428728), (16428822, 16429578), (16428822, 16429330), (16429462, 16429578)] 2021-10-25 09:36:02.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.472 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.495 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0290009': ['FBtr0329992']} 2021-10-25 09:36:02.495 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329992']] 2021-10-25 09:36:02.502 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19651317, 19651402)] 2021-10-25 09:36:02.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.504 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.564 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20758385, 20760524), (20758663, 20760524), (20760457, 20760524), (20760841, 20763496), (20765452, 20765509), (20766040, 20766117)] 2021-10-25 09:36:02.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031052: ['FBtr0074746', 'FBtr0345016'] 2021-10-25 09:36:02.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034964: ['FBtr0072168'] 2021-10-25 09:36:02.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034964 has a single transcript. 2021-10-25 09:36:02.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264291: ['FBtr0083408'] 2021-10-25 09:36:02.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264291 has a single transcript. 2021-10-25 09:36:02.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034965: ['FBtr0289967', 'FBtr0289968', 'FBtr0289969', 'FBtr0289970', 'FBtr0343344'] 2021-10-25 09:36:02.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264294: ['FBtr0088905', 'FBtr0088906'] 2021-10-25 09:36:02.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19652558, 19652626), (19653262, 19653321), (19653638, 19653692), (19654056, 19654125), (19654316, 19654451), (19655228, 19655297)] 2021-10-25 09:36:02.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.667 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7533730, 7535331), (7535095, 7535331)] 2021-10-25 09:36:02.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.718 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031053: ['FBtr0074758', 'FBtr0332890', 'FBtr0332891'] 2021-10-25 09:36:02.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264295: ['FBtr0331498'] 2021-10-25 09:36:02.743 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264295 has a single transcript. 2021-10-25 09:36:02.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264296: ['FBtr0331499'] 2021-10-25 09:36:02.753 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264296 has a single transcript. 2021-10-25 09:36:02.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264297: ['FBtr0331500'] 2021-10-25 09:36:02.762 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264297 has a single transcript. 2021-10-25 09:36:02.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24053135, 24053197), (24053319, 24053378), (24053319, 24053373), (24053461, 24053526), (24053574, 24053635), (24053718, 24053789), (24053977, 24054046), (24054143, 24054198), (24054335, 24054406), (24054752, 24054811), (24054971, 24055133), (24055284, 24057081), (24055284, 24057067)] 2021-10-25 09:36:02.767 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24053526, 24053718, 'FBtr0289968_exon_8') contains intron (24053574, 24053635) 2021-10-25 09:36:02.768 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24053526, 24053718, 'FBtr0289969_exon_8') contains intron (24053574, 24053635) 2021-10-25 09:36:02.769 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0289968_exon_8', 'FBtr0289969_exon_8'] 2021-10-25 09:36:02.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264298: ['FBtr0343439', 'FBtr0331501'] 2021-10-25 09:36:02.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19660598, 19660663), (19661608, 19662003), (19661608, 19663618), (19661608, 19662668)] 2021-10-25 09:36:02.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.803 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011204: ['FBtr0072706'] 2021-10-25 09:36:02.807 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011204 has a single transcript. 2021-10-25 09:36:02.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011205: ['FBtr0078190', 'FBtr0078186', 'FBtr0078188', 'FBtr0078189', 'FBtr0078187', 'FBtr0307392', 'FBtr0307393'] 2021-10-25 09:36:02.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24123311, 24123364), (24123524, 24123583), (24123682, 24123736), (24124434, 24124489), (24124649, 24124707), (24124812, 24124870), (24125570, 24125627), (24125787, 24125841), (24125946, 24126003)] 2021-10-25 09:36:02.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:02.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264299: ['FBtr0343440', 'FBtr0343441', 'FBtr0331502'] 2021-10-25 09:36:02.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031054: ['FBtr0074747', 'FBtr0332889', 'FBtr0344152'] 2021-10-25 09:36:02.979 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24123311, 24123364), (24123524, 24123583), (24123682, 24123736), (24124434, 24124489), (24124649, 24124707), (24124812, 24124870), (24125570, 24125627), (24125787, 24125841), (24125946, 24126003)] 2021-10-25 09:36:02.981 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:02.981 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034966: ['FBtr0113117'] 2021-10-25 09:36:03.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034966 has a single transcript. 2021-10-25 09:36:03.015 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19664869, 19664934), (19664872, 19664934), (19665193, 19665251)] 2021-10-25 09:36:03.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20384858, 20388668), (20386854, 20388668), (20388001, 20388668), (20388028, 20388668), (20388567, 20388668), (20388847, 20389915), (20389232, 20389915), (20390208, 20390267), (20390393, 20390457), (20390634, 20390689), (20390825, 20390885)] 2021-10-25 09:36:03.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034968: ['FBtr0072175', 'FBtr0072176', 'FBtr0072174'] 2021-10-25 09:36:03.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264301: ['FBtr0331506'] 2021-10-25 09:36:03.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264301 has a single transcript. 2021-10-25 09:36:03.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24060444, 24060512), (24060574, 24060675), (24060749, 24060812), (24060993, 24061149)] 2021-10-25 09:36:03.108 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.108 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264302: ['FBtr0331507', 'FBtr0331508'] 2021-10-25 09:36:03.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031055: ['FBtr0308570', 'FBtr0308571'] 2021-10-25 09:36:03.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7334454, 7334541), (7334469, 7334541), (7334898, 7335079)] 2021-10-25 09:36:03.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19673470, 19674504), (19673470, 19674510), (19675668, 19675803), (19675668, 19675846)] 2021-10-25 09:36:03.206 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.206 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264303: ['FBtr0331509', 'FBtr0331510'] 2021-10-25 09:36:03.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034970: ['FBtr0309372', 'FBtr0290256', 'FBtr0290258', 'FBtr0452181'] 2021-10-25 09:36:03.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031057: ['FBtr0074750', 'FBtr0340612'] 2021-10-25 09:36:03.301 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7334454, 7334541), (7334469, 7334541), (7334898, 7335079)] 2021-10-25 09:36:03.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.330 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19684096, 19684439), (19685910, 19685989)] 2021-10-25 09:36:03.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011206: ['FBtr0076538', 'FBtr0076539', 'FBtr0076540', 'FBtr0076541', 'FBtr0300462', 'FBtr0344979', 'FBtr0331858'] 2021-10-25 09:36:03.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24066177, 24066260), (24066313, 24067162), (24066313, 24066560), (24066716, 24067162), (24067254, 24067464), (24068359, 24068424)] 2021-10-25 09:36:03.368 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24067464, 24068485, 'FBtr0290256_exon_1') contains intron (24068359, 24068424) 2021-10-25 09:36:03.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24067464, 24068485, 'FBtr0290258_exon_1') contains intron (24068359, 24068424) 2021-10-25 09:36:03.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24067464, 24068485, 'FBtr0452181_exon_1') contains intron (24068359, 24068424) 2021-10-25 09:36:03.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0290256_exon_1', 'FBtr0290258_exon_1', 'FBtr0452181_exon_1'] 2021-10-25 09:36:03.370 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.383 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264305: ['FBtr0331516', 'FBtr0331517', 'FBtr0331518', 'FBtr0331519', 'FBtr0331520'] 2021-10-25 09:36:03.390 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0290258': ['FBtr0452181']} 2021-10-25 09:36:03.391 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0452181']] 2021-10-25 09:36:03.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031058: ['FBtr0300350'] 2021-10-25 09:36:03.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031058 has a single transcript. 2021-10-25 09:36:03.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031059: ['FBtr0074753', 'FBtr0344968', 'FBtr0335023'] 2021-10-25 09:36:03.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034971: ['FBtr0072179', 'FBtr0343336', 'FBtr0343337', 'FBtr0302165'] 2021-10-25 09:36:03.498 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19694864, 19694928)] 2021-10-25 09:36:03.500 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.500 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8933489, 8933565), (8934140, 8934230), (8934140, 8934404), (8934308, 8934404), (8934311, 8934404), (8934596, 8934665), (8934938, 8934995), (8935203, 8935264), (8936770, 8947827), (8947889, 8948882), (8949280, 8949656), (8949759, 8953932), (8949759, 8952818)] 2021-10-25 09:36:03.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.535 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.562 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9102807, 9107341), (9107155, 9107341), (9107375, 9107618), (9107695, 9107955), (9107710, 9107955), (9108073, 9108131), (9108191, 9112633), (9108191, 9112161), (9112368, 9112633), (9112787, 9113045), (9113487, 9129896), (9113487, 9123615), (9123776, 9125166), (9130608, 9134316)] 2021-10-25 09:36:03.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.566 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.605 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24069334, 24069738), (24069942, 24069999), (24070242, 24072704), (24070242, 24071990), (24070242, 24070767), (24071004, 24072704), (24071004, 24071990), (24072224, 24072704), (24072961, 24073027)] 2021-10-25 09:36:03.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031060: ['FBtr0074814', 'FBtr0309217'] 2021-10-25 09:36:03.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19701488, 19701543)] 2021-10-25 09:36:03.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031061: ['FBtr0074813', 'FBtr0309218'] 2021-10-25 09:36:03.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264307: ['FBtr0331514', 'FBtr0331513', 'FBtr0331511', 'FBtr0331515', 'FBtr0331512'] 2021-10-25 09:36:03.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034972: ['FBtr0072288'] 2021-10-25 09:36:03.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034972 has a single transcript. 2021-10-25 09:36:03.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034973: ['FBtr0072246'] 2021-10-25 09:36:03.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034973 has a single transcript. 2021-10-25 09:36:03.820 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034974: ['FBtr0072248', 'FBtr0072247', 'FBtr0345620'] 2021-10-25 09:36:03.821 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19702673, 19702732), (19703197, 19703402), (19703830, 19703888), (19704062, 19704138)] 2021-10-25 09:36:03.822 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19703888, 19704153, 'FBtr0074813_exon_1') contains intron (19704062, 19704138) 2021-10-25 09:36:03.823 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074813_exon_1'] 2021-10-25 09:36:03.823 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031062: ['FBtr0074787'] 2021-10-25 09:36:03.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031062 has a single transcript. 2021-10-25 09:36:03.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031064: ['FBtr0074788', 'FBtr0335043'] 2021-10-25 09:36:03.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011207: ['FBtr0079847'] 2021-10-25 09:36:03.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011207 has a single transcript. 2021-10-25 09:36:03.932 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24082038, 24082980), (24083069, 24083470), (24083584, 24083651), (24084285, 24084338), (24084819, 24084931)] 2021-10-25 09:36:03.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011211: ['FBtr0071883'] 2021-10-25 09:36:03.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011211 has a single transcript. 2021-10-25 09:36:03.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011217: ['FBtr0083018', 'FBtr0310554', 'FBtr0336876'] 2021-10-25 09:36:03.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8944520, 8947827), (8944520, 8944817), (8947889, 8948882), (8949280, 8949656), (8949759, 8953932), (8949759, 8952818), (8954252, 8954377)] 2021-10-25 09:36:03.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:03.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19719770, 19722711), (19722837, 19722902), (19723056, 19723282), (19723414, 19723483), (19723582, 19723655), (19723864, 19723967), (19724139, 19724417), (19724601, 19724672), (19725265, 19725469), (19725635, 19725713), (19725924, 19726003), (19726100, 19726429), (19726100, 19726426)] 2021-10-25 09:36:03.967 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:03.967 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14733634, 14733699), (14733883, 14734386), (14734418, 14737419), (14737483, 14740379), (14740940, 14741006)] 2021-10-25 09:36:04.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031065: ['FBtr0074790'] 2021-10-25 09:36:04.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031065 has a single transcript. 2021-10-25 09:36:04.034 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031066: ['FBtr0074815', 'FBtr0074816', 'FBtr0074817', 'FBtr0308683'] 2021-10-25 09:36:04.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034975: ['FBtr0072250', 'FBtr0343339'] 2021-10-25 09:36:04.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24099371, 24099874), (24099640, 24099874), (24100743, 24100802), (24100886, 24100946), (24105690, 24105754)] 2021-10-25 09:36:04.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19741165, 19743999), (19741165, 19744261), (19741168, 19744261), (19741202, 19744261)] 2021-10-25 09:36:04.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.151 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.190 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034976: ['FBtr0072285'] 2021-10-25 09:36:04.190 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034976 has a single transcript. 2021-10-25 09:36:04.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264308: ['FBtr0331505', 'FBtr0331504', 'FBtr0331503'] 2021-10-25 09:36:04.200 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034978: ['FBtr0072252'] 2021-10-25 09:36:04.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034978 has a single transcript. 2021-10-25 09:36:04.202 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011224: ['FBtr0085887', 'FBtr0085888', 'FBtr0085879', 'FBtr0085880', 'FBtr0085881', 'FBtr0085882', 'FBtr0085883', 'FBtr0085884', 'FBtr0085885', 'FBtr0085886', 'FBtr0085878', 'FBtr0112864', 'FBtr0112865', 'FBtr0112866', 'FBtr0300263', 'FBtr0300264', 'FBtr0300265', 'FBtr0300266', 'FBtr0300267', 'FBtr0300268', 'FBtr0300269', 'FBtr0300270', 'FBtr0306692', 'FBtr0306693', 'FBtr0346192'] 2021-10-25 09:36:04.207 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034982: ['FBtr0072280', 'FBtr0100398'] 2021-10-25 09:36:04.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24135367, 24135429), (24136467, 24136525), (24136707, 24136767), (24137335, 24137398), (24137768, 24137860), (24137771, 24137860)] 2021-10-25 09:36:04.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.263 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.275 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13305591, 13305656), (13305837, 13307934), (13308298, 13308409), (13309571, 13309639), (13310264, 13330798)] 2021-10-25 09:36:04.277 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.277 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.296 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0331505': ['FBtr0331503']} 2021-10-25 09:36:04.296 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331503']] 2021-10-25 09:36:04.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031068: ['FBtr0074794', 'FBtr0331763'] 2021-10-25 09:36:04.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034985: ['FBtr0072257', 'FBtr0343434', 'FBtr0343435'] 2021-10-25 09:36:04.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264309: ['FBtr0346026'] 2021-10-25 09:36:04.362 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264309 has a single transcript. 2021-10-25 09:36:04.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264310: ['FBtr0331772', 'FBtr0331773'] 2021-10-25 09:36:04.376 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19748549, 19748903), (19749308, 19749387), (19749629, 19749688)] 2021-10-25 09:36:04.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(737350, 737429)] 2021-10-25 09:36:04.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (737051, 737479, 'FBtr0331773_exon_1') contains intron (737350, 737429) 2021-10-25 09:36:04.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331773_exon_1'] 2021-10-25 09:36:04.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.429 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24162701, 24166412), (24162719, 24166412), (24166498, 24168457), (24167796, 24168457), (24169880, 24170126), (24170766, 24170827), (24171096, 24171169), (24172271, 24172326), (24172838, 24173035), (24173255, 24173315)] 2021-10-25 09:36:04.430 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.431 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.449 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031069: ['FBtr0074795', 'FBtr0335155', 'FBtr0335156', 'FBtr0335157'] 2021-10-25 09:36:04.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264324: ['FBtr0330303', 'FBtr0330304', 'FBtr0330305', 'FBtr0336765', 'FBtr0336766'] 2021-10-25 09:36:04.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034986: ['FBtr0072277'] 2021-10-25 09:36:04.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034986 has a single transcript. 2021-10-25 09:36:04.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19750890, 19751347), (19751137, 19751347), (19751546, 19756429), (19755344, 19756429), (19756542, 19756611), (19756802, 19756870), (19756968, 19757033), (19757497, 19757567), (19757997, 19758101), (19758276, 19758343)] 2021-10-25 09:36:04.562 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19750769, 19751546, 'FBtr0335157_exon_1') contains intron (19750890, 19751347) 2021-10-25 09:36:04.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335157_exon_1'] 2021-10-25 09:36:04.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034988: ['FBtr0072261'] 2021-10-25 09:36:04.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034988 has a single transcript. 2021-10-25 09:36:04.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034989: ['FBtr0072262'] 2021-10-25 09:36:04.574 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034989 has a single transcript. 2021-10-25 09:36:04.582 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034990: ['FBtr0072276', 'FBtr0100169', 'FBtr0300874', 'FBtr0343437'] 2021-10-25 09:36:04.665 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28845409, 28845948), (28846000, 28852878), (28853120, 28853181), (28853330, 28862777), (28862898, 28862960), (28863198, 28863254), (28864988, 28865046), (28865867, 28865928), (28866038, 28866152), (28866038, 28866316), (28866170, 28866316), (28866523, 28866584), (28866759, 28866818), (28867040, 28867107)] 2021-10-25 09:36:04.668 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28845299, 28846000, 'FBtr0336765_exon_1') contains intron (28845409, 28845948) 2021-10-25 09:36:04.669 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (28845299, 28846000, 'FBtr0336766_exon_1') contains intron (28845409, 28845948) 2021-10-25 09:36:04.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336765_exon_1', 'FBtr0336766_exon_1'] 2021-10-25 09:36:04.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24202574, 24202734), (24202646, 24202734), (24202819, 24205810), (24205969, 24206229), (24206802, 24208143)] 2021-10-25 09:36:04.709 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24202734, 24205969, 'FBtr0300874_exon_2') contains intron (24202819, 24205810) 2021-10-25 09:36:04.709 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24202734, 24205969, 'FBtr0343437_exon_2') contains intron (24202819, 24205810) 2021-10-25 09:36:04.710 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300874_exon_2', 'FBtr0343437_exon_2'] 2021-10-25 09:36:04.710 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.753 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031070: ['FBtr0074809', 'FBtr0346378', 'FBtr0335137'] 2021-10-25 09:36:04.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19759664, 19759731), (19759966, 19760034), (19760429, 19760487), (19761198, 19761255), (19762719, 19764710), (19762719, 19762784)] 2021-10-25 09:36:04.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034994: ['FBtr0072274'] 2021-10-25 09:36:04.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034994 has a single transcript. 2021-10-25 09:36:04.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034996: ['FBtr0072264'] 2021-10-25 09:36:04.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0034996 has a single transcript. 2021-10-25 09:36:04.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264325: ['FBtr0084590'] 2021-10-25 09:36:04.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264325 has a single transcript. 2021-10-25 09:36:04.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034997: ['FBtr0072266', 'FBtr0072265', 'FBtr0343442', 'FBtr0308245'] 2021-10-25 09:36:04.921 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31851987, 31852097), (31852175, 31852591), (31852808, 31857878), (31857971, 31864596), (31864630, 31865131), (31865325, 31865750), (31865325, 31865762), (31866036, 31866118), (31866436, 31873833), (31874099, 31881747), (31874099, 31933453), (31881871, 31945621), (31881871, 31921632), (31881871, 31933453), (31881871, 31932071), (31881871, 31959034), (31921674, 31932071), (31921674, 31959034), (31921674, 31931774), (31932614, 31959034), (31933799, 31935665), (31933799, 31935115), (31933887, 31936689), (31935775, 31937269), (31935775, 31936689), (31945658, 31959034), (31959127, 31972501), (31959127, 31969755), (31959127, 31975447), (31959127, 31979522), (31969785, 31979522), (31969785, 31972501), (31969785, 31975447), (31972553, 31979522), (31975565, 31985711), (31975602, 31985510), (31975965, 31979522), (31979619, 31981866), (31979619, 31981020), (31979619, 31985233), (31979619, 31981584), (31979619, 31985492), (31979619, 32014359), (31979619, 31984125), (31979619, 31985510), (31979619, 31993207), (31979619, 31980454), (31979619, 31981302), (31981926, 31985711), (31984185, 31985711)] 2021-10-25 09:36:04.926 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264326: ['FBtr0084408'] 2021-10-25 09:36:04.926 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264326 has a single transcript. 2021-10-25 09:36:04.933 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264327: ['FBtr0331959'] 2021-10-25 09:36:04.933 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264327 has a single transcript. 2021-10-25 09:36:04.934 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:04.935 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:04.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264328: ['FBtr0331957'] 2021-10-25 09:36:04.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264328 has a single transcript. 2021-10-25 09:36:04.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264329: ['FBtr0331961'] 2021-10-25 09:36:04.949 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264329 has a single transcript. 2021-10-25 09:36:04.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264330: ['FBtr0331962'] 2021-10-25 09:36:04.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264330 has a single transcript. 2021-10-25 09:36:04.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031074: ['FBtr0074806'] 2021-10-25 09:36:04.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031074 has a single transcript. 2021-10-25 09:36:04.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264336: ['FBtr0331986'] 2021-10-25 09:36:04.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264336 has a single transcript. 2021-10-25 09:36:04.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031077: ['FBtr0308650', 'FBtr0289978'] 2021-10-25 09:36:04.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264337: ['FBtr0331988'] 2021-10-25 09:36:04.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264337 has a single transcript. 2021-10-25 09:36:04.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264338: ['FBtr0331987'] 2021-10-25 09:36:04.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264338 has a single transcript. 2021-10-25 09:36:04.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264339: ['FBtr0331989'] 2021-10-25 09:36:04.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264339 has a single transcript. 2021-10-25 09:36:04.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264340: ['FBtr0332009'] 2021-10-25 09:36:04.997 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264340 has a single transcript. 2021-10-25 09:36:05.005 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264341: ['FBtr0332007'] 2021-10-25 09:36:05.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264341 has a single transcript. 2021-10-25 09:36:05.013 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264342: ['FBtr0332006'] 2021-10-25 09:36:05.013 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264342 has a single transcript. 2021-10-25 09:36:05.020 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264343: ['FBtr0332003'] 2021-10-25 09:36:05.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264343 has a single transcript. 2021-10-25 09:36:05.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19861209, 19861271), (19861436, 19861506), (19863758, 19863825), (19864658, 19864727), (19864662, 19864727), (19865009, 19865079), (19865009, 19865084), (19865262, 19865349)] 2021-10-25 09:36:05.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264344: ['FBtr0332004', 'FBtr0332005'] 2021-10-25 09:36:05.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24258475, 24261925), (24261849, 24261925), (24262108, 24262163), (24263481, 24263535), (24263744, 24263802), (24264097, 24264159), (24264345, 24264781), (24264345, 24264585)] 2021-10-25 09:36:05.033 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24264159, 24265213, 'FBtr0072265_exon_6') contains intron (24264345, 24264781) 2021-10-25 09:36:05.034 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072265_exon_6'] 2021-10-25 09:36:05.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.076 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7232645, 7232704), (7232645, 7232760)] 2021-10-25 09:36:05.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031078: ['FBtr0074799', 'FBtr0074798'] 2021-10-25 09:36:05.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264345: ['FBtr0332010'] 2021-10-25 09:36:05.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264345 has a single transcript. 2021-10-25 09:36:05.155 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19852354, 19852423), (19852569, 19852648), (19852972, 19853059), (19853161, 19853251), (19853814, 19853878), (19854379, 19854435), (19855987, 19856087), (19857472, 19857535), (19858588, 19858662), (19858820, 19858903)] 2021-10-25 09:36:05.157 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19852213, 19852569, 'FBtr0074798_exon_1') contains intron (19852354, 19852423) 2021-10-25 09:36:05.157 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074798_exon_1'] 2021-10-25 09:36:05.158 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264346: ['FBtr0332012', 'FBtr0332013'] 2021-10-25 09:36:05.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034998: ['FBtr0343444', 'FBtr0300366'] 2021-10-25 09:36:05.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17042937, 17043043)] 2021-10-25 09:36:05.233 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17042480, 17043165, 'FBtr0332013_exon_1') contains intron (17042937, 17043043) 2021-10-25 09:36:05.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332013_exon_1'] 2021-10-25 09:36:05.233 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031080: ['FBtr0070036'] 2021-10-25 09:36:05.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031080 has a single transcript. 2021-10-25 09:36:05.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031081: ['FBtr0070000', 'FBtr0307554', 'FBtr0307555'] 2021-10-25 09:36:05.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24269030, 24269089)] 2021-10-25 09:36:05.278 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264347: ['FBtr0332014'] 2021-10-25 09:36:05.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264347 has a single transcript. 2021-10-25 09:36:05.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264348: ['FBtr0332018'] 2021-10-25 09:36:05.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264348 has a single transcript. 2021-10-25 09:36:05.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264349: ['FBtr0343683', 'FBtr0332019'] 2021-10-25 09:36:05.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19961600, 19963954), (19961845, 19963954), (19963341, 19963954), (19964071, 19964781), (19964944, 19965005), (19965126, 19965196), (19965511, 19965576), (19966071, 19966182), (19967012, 19967080), (19967223, 19967283)] 2021-10-25 09:36:05.333 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.333 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0034999: ['FBtr0072268', 'FBtr0072269'] 2021-10-25 09:36:05.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14841729, 14841798)] 2021-10-25 09:36:05.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24294221, 24295572), (24295849, 24295907), (24297384, 24297682)] 2021-10-25 09:36:05.981 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:05.981 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:05.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264350: ['FBtr0346760', 'FBtr0332026'] 2021-10-25 09:36:06.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16179085, 16179142)] 2021-10-25 09:36:06.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031082: ['FBtr0070035'] 2021-10-25 09:36:06.047 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031082 has a single transcript. 2021-10-25 09:36:06.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035000: ['FBtr0072289'] 2021-10-25 09:36:06.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035000 has a single transcript. 2021-10-25 09:36:06.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031085: ['FBtr0070002'] 2021-10-25 09:36:06.057 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031085 has a single transcript. 2021-10-25 09:36:06.064 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031086: ['FBtr0070032'] 2021-10-25 09:36:06.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031086 has a single transcript. 2021-10-25 09:36:06.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035001: ['FBtr0072363', 'FBtr0072366', 'FBtr0072364', 'FBtr0100470', 'FBtr0290019', 'FBtr0332925'] 2021-10-25 09:36:06.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031088: ['FBtr0301569', 'FBtr0343166'] 2021-10-25 09:36:06.170 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20134013, 20135013), (20135233, 20135846), (20136004, 20136108), (20137021, 20137464)] 2021-10-25 09:36:06.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.172 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.180 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264351: ['FBtr0332028'] 2021-10-25 09:36:06.181 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264351 has a single transcript. 2021-10-25 09:36:06.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264352: ['FBtr0332031', 'FBtr0332032'] 2021-10-25 09:36:06.269 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5905899, 5906035), (5905899, 5906010)] 2021-10-25 09:36:06.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.282 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031089: ['FBtr0070006', 'FBtr0343173', 'FBtr0303256'] 2021-10-25 09:36:06.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24393203, 24393487), (24393203, 24396042), (24393203, 24393412), (24393514, 24396042), (24393514, 24394294), (24395275, 24396042), (24396175, 24396232), (24396339, 24396402), (24398634, 24398690), (24399046, 24399107), (24399183, 24399849), (24399183, 24400199), (24399891, 24400199), (24400340, 24400407), (24400718, 24400781), (24400980, 24401045), (24401444, 24401662), (24401485, 24401662), (24401771, 24401834), (24401808, 24402560)] 2021-10-25 09:36:06.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264353: ['FBtr0332035'] 2021-10-25 09:36:06.442 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264353 has a single transcript. 2021-10-25 09:36:06.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20148261, 20150061), (20148261, 20150064), (20150125, 20150597), (20150236, 20150597), (20150836, 20150944), (20151026, 20154197), (20154814, 20155098)] 2021-10-25 09:36:06.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.470 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264357: ['FBtr0301585', 'FBtr0110939', 'FBtr0301586', 'FBtr0301587', 'FBtr0084019', 'FBtr0110938', 'FBtr0110937', 'FBtr0301588', 'FBtr0084018', 'FBtr0112916', 'FBtr0112915', 'FBtr0301589', 'FBtr0084020', 'FBtr0084024', 'FBtr0084021', 'FBtr0084022'] 2021-10-25 09:36:06.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031090: ['FBtr0070028', 'FBtr0333548', 'FBtr0333549', 'FBtr0303258'] 2021-10-25 09:36:06.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20157836, 20157969), (20158269, 20158895), (20158269, 20158338), (20158528, 20158895)] 2021-10-25 09:36:06.814 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:06.815 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:06.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035003: ['FBtr0072357'] 2021-10-25 09:36:06.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035003 has a single transcript. 2021-10-25 09:36:06.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035004: ['FBtr0072356'] 2021-10-25 09:36:06.860 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035004 has a single transcript. 2021-10-25 09:36:06.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035005: ['FBtr0072293'] 2021-10-25 09:36:06.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035005 has a single transcript. 2021-10-25 09:36:06.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035006: ['FBtr0072355'] 2021-10-25 09:36:06.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035006 has a single transcript. 2021-10-25 09:36:06.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035007: ['FBtr0072294'] 2021-10-25 09:36:06.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035007 has a single transcript. 2021-10-25 09:36:06.886 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035008: ['FBtr0072295', 'FBtr0072296'] 2021-10-25 09:36:07.035 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24474395, 24474446)] 2021-10-25 09:36:07.036 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24474357, 24475261, 'FBtr0072296_exon_1') contains intron (24474395, 24474446) 2021-10-25 09:36:07.037 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072296_exon_1'] 2021-10-25 09:36:07.037 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035009: ['FBtr0072297'] 2021-10-25 09:36:07.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035009 has a single transcript. 2021-10-25 09:36:07.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035010: ['FBtr0072298', 'FBtr0330230'] 2021-10-25 09:36:07.231 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031091: ['FBtr0070027', 'FBtr0333546', 'FBtr0333547'] 2021-10-25 09:36:07.242 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24455847, 24483039), (24483268, 24483324), (24483450, 24484277), (24484394, 24486540), (24486613, 24486683), (24487135, 24487693), (24487825, 24487957), (24488083, 24488742)] 2021-10-25 09:36:07.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.258 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072298': ['FBtr0330230']} 2021-10-25 09:36:07.258 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330230']] 2021-10-25 09:36:07.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035011: ['FBtr0072354'] 2021-10-25 09:36:07.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035011 has a single transcript. 2021-10-25 09:36:07.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035012: ['FBtr0072353'] 2021-10-25 09:36:07.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035012 has a single transcript. 2021-10-25 09:36:07.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21141311, 21154889), (21153697, 21154889), (21155071, 21155232), (21155387, 21178277), (21156411, 21157614), (21156411, 21157437), (21156411, 21157496), (21157657, 21173838), (21175633, 21178277), (21178399, 21178579), (21179204, 21179267), (21179390, 21185547), (21180854, 21185012), (21180928, 21185012), (21181181, 21185012), (21185308, 21185547), (21185584, 21202451), (21188965, 21200759), (21188970, 21200759), (21199331, 21200759), (21199396, 21200759), (21199763, 21200759), (21200450, 21200759), (21201408, 21201684), (21202330, 21202451), (21202585, 21207618), (21206050, 21207618), (21207667, 21210788), (21208633, 21210366), (21210705, 21210788), (21211079, 21211140), (21211319, 21211386), (21211590, 21211747)] 2021-10-25 09:36:07.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035014: ['FBtr0072300'] 2021-10-25 09:36:07.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035014 has a single transcript. 2021-10-25 09:36:07.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.288 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035016: ['FBtr0072346', 'FBtr0306137'] 2021-10-25 09:36:07.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20161875, 20161939), (20162442, 20162534), (20162836, 20165656), (20162841, 20165656)] 2021-10-25 09:36:07.464 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24524542, 24524773), (24525651, 24525714)] 2021-10-25 09:36:07.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.465 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011225: ['FBtr0084636', 'FBtr0301367', 'FBtr0301368', 'FBtr0301369', 'FBtr0301370', 'FBtr0301371', 'FBtr0334871', 'FBtr0334872', 'FBtr0345266'] 2021-10-25 09:36:07.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035019: ['FBtr0336954'] 2021-10-25 09:36:07.626 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035019 has a single transcript. 2021-10-25 09:36:07.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035020: ['FBtr0072303', 'FBtr0072304', 'FBtr0300488', 'FBtr0300489'] 2021-10-25 09:36:07.702 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031092: ['FBtr0070007'] 2021-10-25 09:36:07.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031092 has a single transcript. 2021-10-25 09:36:07.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031093: ['FBtr0070026'] 2021-10-25 09:36:07.712 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031093 has a single transcript. 2021-10-25 09:36:07.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031094: ['FBtr0070008'] 2021-10-25 09:36:07.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031094 has a single transcript. 2021-10-25 09:36:07.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031097: ['FBtr0077334', 'FBtr0306737'] 2021-10-25 09:36:07.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20240026, 20241061), (20241265, 20241610), (20241814, 20241884)] 2021-10-25 09:36:07.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24531636, 24532439), (24531734, 24532439), (24532378, 24532439), (24532541, 24532597), (24532643, 24532896)] 2021-10-25 09:36:07.839 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.840 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24253598, 24253662), (24253764, 24253827), (24253945, 24254003), (24254124, 24254403), (24254124, 24254633), (24254124, 24254993), (24254448, 24254633), (24254678, 24254993), (24255224, 24255284), (24255505, 24255561), (24255803, 24255868), (24256301, 24256359), (24257104, 24257176), (24257583, 24257647), (24257910, 24257970), (24258132, 24258195), (24258325, 24258384), (24258458, 24259054), (24259249, 24259395), (24259249, 24263040), (24259249, 24270898)] 2021-10-25 09:36:07.908 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031098: ['FBtr0077341'] 2021-10-25 09:36:07.909 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:07.909 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031098 has a single transcript. 2021-10-25 09:36:07.909 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:07.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031099: ['FBtr0077340', 'FBtr0301568', 'FBtr0345924'] 2021-10-25 09:36:08.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20255081, 20255131), (20255672, 20255763), (20255714, 20255763), (20256032, 20256775)] 2021-10-25 09:36:08.026 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035021: ['FBtr0072344', 'FBtr0300490'] 2021-10-25 09:36:08.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24534187, 24534243), (24534363, 24534414), (24535086, 24535141), (24535326, 24536024), (24536637, 24555942)] 2021-10-25 09:36:08.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.107 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031100: ['FBtr0306678', 'FBtr0335040', 'FBtr0335041', 'FBtr0335042'] 2021-10-25 09:36:08.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035022: ['FBtr0072305'] 2021-10-25 09:36:08.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035022 has a single transcript. 2021-10-25 09:36:08.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035023: ['FBtr0300186', 'FBtr0300187', 'FBtr0290218', 'FBtr0290219', 'FBtr0343483'] 2021-10-25 09:36:08.272 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20304188, 20310277), (20311463, 20315309), (20315949, 20330117), (20315949, 20329162), (20329275, 20330117), (20329542, 20330117)] 2021-10-25 09:36:08.274 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.274 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24537522, 24555353), (24541020, 24555353), (24544090, 24545426), (24545690, 24555353), (24555571, 24558029), (24555571, 24556004), (24555571, 24556283), (24557699, 24558029)] 2021-10-25 09:36:08.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.338 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011227: ['FBtr0087861'] 2021-10-25 09:36:08.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011227 has a single transcript. 2021-10-25 09:36:08.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011230: ['FBtr0079545', 'FBtr0333088'] 2021-10-25 09:36:08.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031101: ['FBtr0077297'] 2021-10-25 09:36:08.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031101 has a single transcript. 2021-10-25 09:36:08.448 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8054593, 8054656), (8056253, 8056308), (8058244, 8058301), (8058784, 8058840), (8060504, 8060565), (8061258, 8061307), (8061512, 8061569), (8067555, 8067624), (8068152, 8068213), (8070380, 8070635), (8071048, 8071171), (8071266, 8071447)] 2021-10-25 09:36:08.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264358: ['FBtr0332253'] 2021-10-25 09:36:08.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264358 has a single transcript. 2021-10-25 09:36:08.450 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.450 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031103: ['FBtr0077332'] 2021-10-25 09:36:08.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264359: ['FBtr0332254'] 2021-10-25 09:36:08.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264359 has a single transcript. 2021-10-25 09:36:08.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031103 has a single transcript. 2021-10-25 09:36:08.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264360: ['FBtr0332257'] 2021-10-25 09:36:08.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264360 has a single transcript. 2021-10-25 09:36:08.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031104: ['FBtr0302241'] 2021-10-25 09:36:08.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031104 has a single transcript. 2021-10-25 09:36:08.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264361: ['FBtr0332235'] 2021-10-25 09:36:08.471 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264361 has a single transcript. 2021-10-25 09:36:08.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031106: ['FBtr0077330'] 2021-10-25 09:36:08.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031106 has a single transcript. 2021-10-25 09:36:08.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264362: ['FBtr0332209'] 2021-10-25 09:36:08.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264362 has a single transcript. 2021-10-25 09:36:08.478 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031107: ['FBtr0301344'] 2021-10-25 09:36:08.478 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031107 has a single transcript. 2021-10-25 09:36:08.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264363: ['FBtr0332222'] 2021-10-25 09:36:08.484 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264363 has a single transcript. 2021-10-25 09:36:08.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031108: ['FBtr0077329'] 2021-10-25 09:36:08.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031108 has a single transcript. 2021-10-25 09:36:08.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031109: ['FBtr0307166'] 2021-10-25 09:36:08.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031109 has a single transcript. 2021-10-25 09:36:08.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264364: ['FBtr0332229', 'FBtr0332230'] 2021-10-25 09:36:08.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031110: ['FBtr0077302'] 2021-10-25 09:36:08.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031110 has a single transcript. 2021-10-25 09:36:08.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031111: ['FBtr0077326', 'FBtr0340362'] 2021-10-25 09:36:08.535 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011232: ['FBtr0079809'] 2021-10-25 09:36:08.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011232 has a single transcript. 2021-10-25 09:36:08.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16005015, 16005087)] 2021-10-25 09:36:08.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011236: ['FBtr0072129'] 2021-10-25 09:36:08.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011236 has a single transcript. 2021-10-25 09:36:08.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011239: ['FBtr0080731', 'FBtr0332374'] 2021-10-25 09:36:08.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20418384, 20418450)] 2021-10-25 09:36:08.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035024: ['FBtr0072307'] 2021-10-25 09:36:08.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035024 has a single transcript. 2021-10-25 09:36:08.589 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035025: ['FBtr0072308'] 2021-10-25 09:36:08.589 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035025 has a single transcript. 2021-10-25 09:36:08.597 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035026: ['FBtr0072342', 'FBtr0343489'] 2021-10-25 09:36:08.610 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15292678, 15292735), (15292946, 15293008), (15293147, 15293208)] 2021-10-25 09:36:08.612 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.612 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031114: ['FBtr0340400'] 2021-10-25 09:36:08.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264365: ['FBtr0332208'] 2021-10-25 09:36:08.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031114 has a single transcript. 2021-10-25 09:36:08.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264365 has a single transcript. 2021-10-25 09:36:08.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264366: ['FBtr0332211'] 2021-10-25 09:36:08.639 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264366 has a single transcript. 2021-10-25 09:36:08.641 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031115: ['FBtr0089642', 'FBtr0089643', 'FBtr0339682'] 2021-10-25 09:36:08.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264367: ['FBtr0346430', 'FBtr0332224'] 2021-10-25 09:36:08.648 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24568602, 24568659), (24568869, 24568939), (24570109, 24570171), (24570353, 24570434), (24570871, 24570933), (24571027, 24571117)] 2021-10-25 09:36:08.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011244: ['FBtr0078000'] 2021-10-25 09:36:08.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011244 has a single transcript. 2021-10-25 09:36:08.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17085812, 17085863)] 2021-10-25 09:36:08.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.708 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011259: ['FBtr0079691', 'FBtr0329930', 'FBtr0329931', 'FBtr0329932', 'FBtr0303877', 'FBtr0303878', 'FBtr0303879'] 2021-10-25 09:36:08.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20427739, 20427799), (20427994, 20428050), (20427994, 20428063), (20428172, 20428232), (20428699, 20428818), (20429437, 20429502)] 2021-10-25 09:36:08.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035027: ['FBtr0072309', 'FBtr0343484'] 2021-10-25 09:36:08.724 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.724 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264368: ['FBtr0332216'] 2021-10-25 09:36:08.768 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264368 has a single transcript. 2021-10-25 09:36:08.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264369: ['FBtr0332217'] 2021-10-25 09:36:08.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264369 has a single transcript. 2021-10-25 09:36:08.778 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24571707, 24571771), (24572074, 24572124), (24572328, 24572385), (24572569, 24572623), (24572856, 24572914), (24573128, 24573181), (24573484, 24573551), (24573670, 24573815), (24573936, 24573995), (24574215, 24574283)] 2021-10-25 09:36:08.780 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.780 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264370: ['FBtr0332221'] 2021-10-25 09:36:08.792 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264370 has a single transcript. 2021-10-25 09:36:08.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264371: ['FBtr0332223'] 2021-10-25 09:36:08.799 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264371 has a single transcript. 2021-10-25 09:36:08.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264372: ['FBtr0332226'] 2021-10-25 09:36:08.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264372 has a single transcript. 2021-10-25 09:36:08.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264373: ['FBtr0332227'] 2021-10-25 09:36:08.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264373 has a single transcript. 2021-10-25 09:36:08.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264374: ['FBtr0343694', 'FBtr0332231'] 2021-10-25 09:36:08.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031116: ['FBtr0332936'] 2021-10-25 09:36:08.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031116 has a single transcript. 2021-10-25 09:36:08.861 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16004196, 16004272)] 2021-10-25 09:36:08.862 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16003755, 16004292, 'FBtr0343694_exon_1') contains intron (16004196, 16004272) 2021-10-25 09:36:08.862 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343694_exon_1'] 2021-10-25 09:36:08.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031117: ['FBtr0077310', 'FBtr0340044', 'FBtr0300210'] 2021-10-25 09:36:08.866 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035028: ['FBtr0089867', 'FBtr0089868', 'FBtr0305054', 'FBtr0343485'] 2021-10-25 09:36:08.898 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8542212, 8543212), (8542212, 8544543), (8543418, 8544543), (8543674, 8544543), (8543715, 8544543), (8545233, 8563738), (8564296, 8631026), (8631123, 8640586), (8640695, 8645026), (8645222, 8654104), (8654209, 8654906), (8654995, 8655230), (8655372, 8655702), (8655824, 8655900), (8655981, 8656360), (8656506, 8660281), (8660364, 8660430), (8660574, 8660647), (8660759, 8661145), (8661288, 8661358), (8661487, 8662438), (8661487, 8662456), (8662646, 8662864), (8663135, 8663197), (8663251, 8665445), (8663251, 8664157), (8663251, 8666035), (8664220, 8665445), (8664220, 8666035), (8665518, 8666035)] 2021-10-25 09:36:08.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264375: ['FBtr0332239', 'FBtr0332240', 'FBtr0332241'] 2021-10-25 09:36:08.955 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20467770, 20468206), (20467770, 20468546), (20468412, 20468546), (20468693, 20469035), (20469458, 20469519)] 2021-10-25 09:36:08.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.957 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24574733, 24574958), (24574900, 24574958), (24575089, 24575150), (24575299, 24575361), (24575520, 24575575), (24575629, 24575690), (24575823, 24575876), (24576010, 24576193), (24576137, 24576193), (24576346, 24576400), (24576505, 24576565), (24577107, 24577175), (24577107, 24577152), (24577299, 24577365)] 2021-10-25 09:36:08.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:08.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19923089, 19923285), (19923217, 19923285), (19923217, 19923282)] 2021-10-25 09:36:08.998 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:08.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031118: ['FBtr0077320', 'FBtr0301537', 'FBtr0340405', 'FBtr0345015', 'FBtr0304906'] 2021-10-25 09:36:09.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264376: ['FBtr0332238'] 2021-10-25 09:36:09.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264376 has a single transcript. 2021-10-25 09:36:09.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264377: ['FBtr0332268'] 2021-10-25 09:36:09.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264377 has a single transcript. 2021-10-25 09:36:09.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264378: ['FBtr0339988', 'FBtr0332258'] 2021-10-25 09:36:09.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035031: ['FBtr0072314'] 2021-10-25 09:36:09.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035031 has a single transcript. 2021-10-25 09:36:09.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035032: ['FBtr0072339', 'FBtr0072340'] 2021-10-25 09:36:09.200 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14994690, 14994787), (14994690, 14994804)] 2021-10-25 09:36:09.201 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.202 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24599497, 24599616), (24599699, 24599766)] 2021-10-25 09:36:09.220 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24599616, 24599797, 'FBtr0072340_exon_1') contains intron (24599699, 24599766) 2021-10-25 09:36:09.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072340_exon_1'] 2021-10-25 09:36:09.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20473502, 20473566), (20474008, 20474221), (20474482, 20474552), (20475518, 20475580), (20475931, 20476001), (20476100, 20476164), (20476264, 20476327), (20476808, 20477265), (20476811, 20477112), (20476811, 20477265), (20477187, 20477265), (20477567, 20477638), (20478340, 20487007), (20487522, 20488329), (20488647, 20490546), (20491394, 20509365), (20509467, 20510518)] 2021-10-25 09:36:09.247 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20473566, 20474482, 'FBtr0077320_exon_13') contains intron (20474008, 20474221) 2021-10-25 09:36:09.248 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20473566, 20474482, 'FBtr0340405_exon_14') contains intron (20474008, 20474221) 2021-10-25 09:36:09.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077320_exon_13', 'FBtr0340405_exon_14'] 2021-10-25 09:36:09.250 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011260: ['FBtr0087088', 'FBtr0087089', 'FBtr0087090', 'FBtr0345339'] 2021-10-25 09:36:09.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264379: ['FBtr0332269'] 2021-10-25 09:36:09.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264379 has a single transcript. 2021-10-25 09:36:09.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264380: ['FBtr0332275'] 2021-10-25 09:36:09.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264380 has a single transcript. 2021-10-25 09:36:09.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035033: ['FBtr0072315'] 2021-10-25 09:36:09.294 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035033 has a single transcript. 2021-10-25 09:36:09.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264381: ['FBtr0332276'] 2021-10-25 09:36:09.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264381 has a single transcript. 2021-10-25 09:36:09.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035034: ['FBtr0072316'] 2021-10-25 09:36:09.303 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035034 has a single transcript. 2021-10-25 09:36:09.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264382: ['FBtr0332277'] 2021-10-25 09:36:09.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264382 has a single transcript. 2021-10-25 09:36:09.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035035: ['FBtr0072317'] 2021-10-25 09:36:09.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035035 has a single transcript. 2021-10-25 09:36:09.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264383: ['FBtr0332278'] 2021-10-25 09:36:09.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264383 has a single transcript. 2021-10-25 09:36:09.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035036: ['FBtr0072338'] 2021-10-25 09:36:09.318 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035036 has a single transcript. 2021-10-25 09:36:09.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264384: ['FBtr0332279', 'FBtr0332280', 'FBtr0332281'] 2021-10-25 09:36:09.324 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035039: ['FBtr0072320', 'FBtr0343487'] 2021-10-25 09:36:09.397 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16500529, 16503504), (16503632, 16525373), (16516270, 16516919), (16516270, 16517018), (16516533, 16517018), (16517341, 16525373), (16525461, 16525712), (16525764, 16527613), (16527682, 16528541), (16528649, 16528898), (16529036, 16529107), (16529240, 16529358), (16529715, 16530249), (16530478, 16530728), (16531065, 16531231), (16531395, 16531458), (16531611, 16531793), (16531902, 16532328)] 2021-10-25 09:36:09.400 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.401 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.434 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24611822, 24612166), (24613287, 24613350), (24613446, 24613507)] 2021-10-25 09:36:09.435 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.436 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.462 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8973380, 8979453), (8973380, 9048413), (8977456, 8977533), (8977656, 8979453), (8979831, 9048413), (9048729, 9048789)] 2021-10-25 09:36:09.463 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.464 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035040: ['FBtr0072337', 'FBtr0343488', 'FBtr0304961'] 2021-10-25 09:36:09.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031119: ['FBtr0077312'] 2021-10-25 09:36:09.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031119 has a single transcript. 2021-10-25 09:36:09.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031126: ['FBtr0077276', 'FBtr0344467', 'FBtr0345967'] 2021-10-25 09:36:09.587 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24611282, 24614728), (24611282, 24613913), (24611282, 24611406), (24613971, 24614032), (24614786, 24614844)] 2021-10-25 09:36:09.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.589 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.590 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011270: ['FBtr0082620'] 2021-10-25 09:36:09.591 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011270 has a single transcript. 2021-10-25 09:36:09.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264385: ['FBtr0332282', 'FBtr0332283'] 2021-10-25 09:36:09.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011272: ['FBtr0079888', 'FBtr0100164', 'FBtr0310482'] 2021-10-25 09:36:09.630 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20657302, 20657528), (20658880, 20659824), (20660643, 20660977)] 2021-10-25 09:36:09.631 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20657121, 20658880, 'FBtr0077276_exon_1') contains intron (20657302, 20657528) 2021-10-25 09:36:09.631 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077276_exon_1'] 2021-10-25 09:36:09.632 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.639 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6996399, 6996481), (6996421, 6996481)] 2021-10-25 09:36:09.640 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.640 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.684 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9967358, 9967616), (9967877, 9967938), (9968247, 9968316)] 2021-10-25 09:36:09.685 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9967329, 9967877, 'FBtr0310482_exon_1') contains intron (9967358, 9967616) 2021-10-25 09:36:09.686 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310482_exon_1'] 2021-10-25 09:36:09.686 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264386: ['FBtr0112953', 'FBtr0304610', 'FBtr0304609', 'FBtr0089393', 'FBtr0334984'] 2021-10-25 09:36:09.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035041: ['FBtr0072336', 'FBtr0343492'] 2021-10-25 09:36:09.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031127: ['FBtr0077277', 'FBtr0345921'] 2021-10-25 09:36:09.789 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24616199, 24620701), (24621067, 24621347), (24621651, 24623672), (24624358, 24624459), (24624542, 24624998), (24625319, 24637282), (24637478, 24638425), (24637478, 24638466)] 2021-10-25 09:36:09.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.791 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011273: ['FBtr0084904', 'FBtr0301963'] 2021-10-25 09:36:09.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20661988, 20669106), (20668491, 20669106), (20669430, 20669494)] 2021-10-25 09:36:09.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.854 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:09.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6107961, 6108029), (6109946, 6111673), (6111823, 6111927), (6112120, 6112420), (6113784, 6113871), (6114033, 6114108), (6114399, 6114601), (6114784, 6115416), (6115572, 6118117), (6115572, 6120234), (6118283, 6123388), (6120349, 6123388), (6123598, 6123693), (6124601, 6124756), (6125095, 6125951), (6125095, 6126244), (6125975, 6126244), (6126857, 6128377), (6126857, 6128392), (6128619, 6130563), (6130656, 6131803), (6131958, 6132191), (6132313, 6137786), (6132313, 6135701), (6135740, 6137786), (6137961, 6138023), (6138255, 6139605), (6139717, 6145264), (6146219, 6164473), (6164503, 6191348), (6191528, 6192346)] 2021-10-25 09:36:09.866 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:09.866 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:09.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035042: ['FBtr0072322'] 2021-10-25 09:36:09.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035042 has a single transcript. 2021-10-25 09:36:09.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035043: ['FBtr0072335'] 2021-10-25 09:36:09.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035043 has a single transcript. 2021-10-25 09:36:09.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035044: ['FBtr0072323'] 2021-10-25 09:36:09.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035044 has a single transcript. 2021-10-25 09:36:09.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035046: ['FBtr0072324', 'FBtr0072325', 'FBtr0072326', 'FBtr0301036'] 2021-10-25 09:36:09.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031128: ['FBtr0077294', 'FBtr0077295', 'FBtr0343572', 'FBtr0304574', 'FBtr0304575', 'FBtr0304576', 'FBtr0304577', 'FBtr0304578'] 2021-10-25 09:36:09.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011274: ['FBtr0081008', 'FBtr0081009', 'FBtr0301577', 'FBtr0301578'] 2021-10-25 09:36:10.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24664446, 24664515), (24664446, 24664507), (24664456, 24664507), (24664456, 24664515), (24664679, 24664853), (24665029, 24665092), (24665183, 24665236)] 2021-10-25 09:36:10.002 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.043 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17414332, 17415280), (17415388, 17417570), (17417646, 17417991), (17418374, 17418487), (17419078, 17420065), (17420113, 17428007), (17420113, 17432857), (17420113, 17427655)] 2021-10-25 09:36:10.044 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17414906, 17417646, 'FBtr0301577_exon_5') contains intron (17415388, 17417570) 2021-10-25 09:36:10.045 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301577_exon_5'] 2021-10-25 09:36:10.045 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264389: ['FBtr0340429', 'FBtr0073968'] 2021-10-25 09:36:10.135 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20671548, 20671668), (20672046, 20672119), (20672376, 20675661), (20672376, 20675134), (20672376, 20676239), (20672376, 20672883), (20672376, 20676817), (20672376, 20673937), (20672376, 20673410), (20672376, 20674730)] 2021-10-25 09:36:10.137 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.137 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.166 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15066299, 15066363)] 2021-10-25 09:36:10.167 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.167 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035047: ['FBtr0072327', 'FBtr0072328', 'FBtr0306655'] 2021-10-25 09:36:10.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011276: ['FBtr0070506'] 2021-10-25 09:36:10.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011276 has a single transcript. 2021-10-25 09:36:10.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011277: ['FBtr0070691', 'FBtr0331163'] 2021-10-25 09:36:10.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264390: ['FBtr0332284'] 2021-10-25 09:36:10.241 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264390 has a single transcript. 2021-10-25 09:36:10.251 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264391: ['FBtr0332319'] 2021-10-25 09:36:10.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264391 has a single transcript. 2021-10-25 09:36:10.257 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24669474, 24669527), (24669474, 24669523), (24669847, 24669901), (24670786, 24670847), (24671039, 24671097)] 2021-10-25 09:36:10.258 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24669396, 24669847, 'FBtr0072328_exon_1') contains intron (24669474, 24669527) 2021-10-25 09:36:10.259 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072328_exon_1'] 2021-10-25 09:36:10.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264392: ['FBtr0332359'] 2021-10-25 09:36:10.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264392 has a single transcript. 2021-10-25 09:36:10.259 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264393: ['FBtr0332397'] 2021-10-25 09:36:10.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264393 has a single transcript. 2021-10-25 09:36:10.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264394: ['FBtr0332402'] 2021-10-25 09:36:10.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264394 has a single transcript. 2021-10-25 09:36:10.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264395: ['FBtr0332419'] 2021-10-25 09:36:10.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264395 has a single transcript. 2021-10-25 09:36:10.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4646442, 4647306)] 2021-10-25 09:36:10.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.283 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264426: ['FBtr0347288', 'FBtr0347289', 'FBtr0347290'] 2021-10-25 09:36:10.295 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0070691': ['FBtr0331163']} 2021-10-25 09:36:10.296 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331163']] 2021-10-25 09:36:10.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011278: ['FBtr0084091'] 2021-10-25 09:36:10.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011278 has a single transcript. 2021-10-25 09:36:10.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011279: ['FBtr0075955'] 2021-10-25 09:36:10.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011279 has a single transcript. 2021-10-25 09:36:10.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011280: ['FBtr0077303', 'FBtr0077304'] 2021-10-25 09:36:10.369 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21889603, 21889664), (21889615, 21889670)] 2021-10-25 09:36:10.371 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21889538, 21890171, 'FBtr0347290_exon_1') contains intron (21889603, 21889664) 2021-10-25 09:36:10.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347290_exon_1'] 2021-10-25 09:36:10.372 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20420285, 20420415), (20420504, 20420576), (20420713, 20420777)] 2021-10-25 09:36:10.382 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.383 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035049: ['FBtr0273263', 'FBtr0273264', 'FBtr0304005', 'FBtr0304006', 'FBtr0304007', 'FBtr0304008', 'FBtr0304009', 'FBtr0304010', 'FBtr0304011', 'FBtr0306656'] 2021-10-25 09:36:10.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011281: ['FBtr0078656', 'FBtr0345250', 'FBtr0345251'] 2021-10-25 09:36:10.545 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264427: ['FBtr0452092', 'FBtr0452093'] 2021-10-25 09:36:10.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031129: ['FBtr0077293', 'FBtr0346615'] 2021-10-25 09:36:10.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5972315, 5972369), (5972626, 5973053), (5973129, 5973208), (5973452, 5975144), (5973452, 5974951)] 2021-10-25 09:36:10.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5522711, 5522763)] 2021-10-25 09:36:10.595 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5522298, 5523120, 'FBtr0452092_exon_1') contains intron (5522711, 5522763) 2021-10-25 09:36:10.595 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20735730, 20735793)] 2021-10-25 09:36:10.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0452092_exon_1'] 2021-10-25 09:36:10.596 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264428: ['FBtr0332548'] 2021-10-25 09:36:10.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264428 has a single transcript. 2021-10-25 09:36:10.669 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031130: ['FBtr0077292'] 2021-10-25 09:36:10.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031130 has a single transcript. 2021-10-25 09:36:10.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264429: ['FBtr0332549'] 2021-10-25 09:36:10.677 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264429 has a single transcript. 2021-10-25 09:36:10.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031132: ['FBtr0077280'] 2021-10-25 09:36:10.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031132 has a single transcript. 2021-10-25 09:36:10.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011282: ['FBtr0081597', 'FBtr0300016'] 2021-10-25 09:36:10.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264430: ['FBtr0332550'] 2021-10-25 09:36:10.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264430 has a single transcript. 2021-10-25 09:36:10.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031134: ['FBtr0077286'] 2021-10-25 09:36:10.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031134 has a single transcript. 2021-10-25 09:36:10.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264431: ['FBtr0332551'] 2021-10-25 09:36:10.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264431 has a single transcript. 2021-10-25 09:36:10.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031135: ['FBtr0303307'] 2021-10-25 09:36:10.693 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031135 has a single transcript. 2021-10-25 09:36:10.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264432: ['FBtr0346422', 'FBtr0332510'] 2021-10-25 09:36:10.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031139: ['FBtr0077273', 'FBtr0077274', 'FBtr0077275'] 2021-10-25 09:36:10.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24672306, 24674972), (24672306, 24675062), (24672306, 24672550), (24672851, 24675062), (24673316, 24675062), (24673316, 24674972), (24675141, 24675209), (24676125, 24676195), (24676599, 24682213), (24682441, 24687895), (24682441, 24684706), (24682441, 24687002)] 2021-10-25 09:36:10.714 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.715 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7250935, 7250995), (7251122, 7251175), (7251240, 7251295), (7251520, 7251803)] 2021-10-25 09:36:10.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.741 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13415776, 13420131), (13419564, 13420131)] 2021-10-25 09:36:10.743 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.743 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.786 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20932774, 20932856), (20933263, 20933353), (20933263, 20933320)] 2021-10-25 09:36:10.787 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20930971, 20933263, 'FBtr0077273_exon_2') contains intron (20932774, 20932856) 2021-10-25 09:36:10.787 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20930971, 20933263, 'FBtr0077274_exon_2') contains intron (20932774, 20932856) 2021-10-25 09:36:10.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077273_exon_2', 'FBtr0077274_exon_2'] 2021-10-25 09:36:10.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011283: ['FBtr0079455'] 2021-10-25 09:36:10.806 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011283 has a single transcript. 2021-10-25 09:36:10.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264433: ['FBtr0332512'] 2021-10-25 09:36:10.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264433 has a single transcript. 2021-10-25 09:36:10.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011284: ['FBtr0075884', 'FBtr0075885', 'FBtr0346390'] 2021-10-25 09:36:10.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264434: ['FBtr0332511'] 2021-10-25 09:36:10.823 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264434 has a single transcript. 2021-10-25 09:36:10.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264435: ['FBtr0332515'] 2021-10-25 09:36:10.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264435 has a single transcript. 2021-10-25 09:36:10.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264436: ['FBtr0332516'] 2021-10-25 09:36:10.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264436 has a single transcript. 2021-10-25 09:36:10.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264437: ['FBtr0332517', 'FBtr0332518'] 2021-10-25 09:36:10.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13041837, 13041981), (13042014, 13042109), (13042368, 13042441), (13042539, 13043165), (13043337, 13043573)] 2021-10-25 09:36:10.895 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8590599, 8594087), (8590599, 8590769)] 2021-10-25 09:36:10.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.896 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13041800, 13042014, 'FBtr0075885_exon_1') contains intron (13041837, 13041981) 2021-10-25 09:36:10.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0075885_exon_1'] 2021-10-25 09:36:10.897 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:10.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031141: ['FBtr0077271'] 2021-10-25 09:36:10.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031141 has a single transcript. 2021-10-25 09:36:10.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031142: ['FBtr0077269'] 2021-10-25 09:36:10.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031142 has a single transcript. 2021-10-25 09:36:10.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031143: ['FBtr0077268', 'FBtr0339633'] 2021-10-25 09:36:10.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264438: ['FBtr0332519'] 2021-10-25 09:36:10.977 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264438 has a single transcript. 2021-10-25 09:36:10.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264439: ['FBtr0332524', 'FBtr0332525'] 2021-10-25 09:36:10.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21027021, 21027737), (21027844, 21027902), (21027952, 21028179)] 2021-10-25 09:36:10.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:10.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7423991, 7425171), (7424363, 7425171)] 2021-10-25 09:36:11.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.041 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011286: ['FBtr0088638', 'FBtr0088639', 'FBtr0088640', 'FBtr0088637', 'FBtr0308083', 'FBtr0304568', 'FBtr0304569', 'FBtr0304570', 'FBtr0304571', 'FBtr0304572'] 2021-10-25 09:36:11.055 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031144: ['FBtr0077267', 'FBtr0340440', 'FBtr0340441'] 2021-10-25 09:36:11.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264440: ['FBtr0332532'] 2021-10-25 09:36:11.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264440 has a single transcript. 2021-10-25 09:36:11.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264441: ['FBtr0332563'] 2021-10-25 09:36:11.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21031522, 21031586), (21031533, 21031586)] 2021-10-25 09:36:11.130 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264441 has a single transcript. 2021-10-25 09:36:11.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264442: ['FBtr0332557', 'FBtr0332558', 'FBtr0332560', 'FBtr0332561', 'FBtr0332562'] 2021-10-25 09:36:11.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035050: ['FBtr0072441', 'FBtr0072442'] 2021-10-25 09:36:11.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031145: ['FBtr0077241', 'FBtr0113007', 'FBtr0333760', 'FBtr0333762'] 2021-10-25 09:36:11.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11210725, 11211767), (11210747, 11211767), (11210773, 11211767), (11211963, 11225693), (11225884, 11235274), (11234935, 11235274), (11236066, 11236203), (11236798, 11236929), (11236828, 11236929), (11237220, 11237355), (11237554, 11258214), (11237554, 11255462), (11258916, 11258982)] 2021-10-25 09:36:11.289 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24691712, 24691775), (24691873, 24691980), (24692260, 24692322), (24692420, 24692674), (24693217, 24693286), (24693469, 24694270), (24693656, 24693906)] 2021-10-25 09:36:11.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.290 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24692674, 24693656, 'FBtr0072441_exon_2') contains intron (24693217, 24693286) 2021-10-25 09:36:11.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072441_exon_2'] 2021-10-25 09:36:11.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.336 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8860430, 8862842), (8860651, 8862842), (8863010, 8865855), (8866059, 8866345), (8866059, 8867003), (8866357, 8867003), (8867081, 8867144), (8867533, 8867597), (8868122, 8868181), (8868306, 8868365), (8869788, 8869843), (8870447, 8870582), (8870447, 8870923), (8870682, 8872219), (8871023, 8872219), (8872424, 8872478), (8873235, 8873294), (8874454, 8874667), (8874454, 8874691), (8874454, 8874709), (8874862, 8874934), (8875050, 8875356), (8877629, 8878137), (8878617, 8879217), (8879355, 8879508), (8879355, 8879520), (8879795, 8879856), (8881954, 8882728), (8881954, 8882303), (8882416, 8883053), (8882838, 8883053), (8883399, 8883621), (8883399, 8883471), (8883492, 8883621), (8883922, 8884214), (8883922, 8884190), (8884325, 8884382), (8884802, 8884870), (8885072, 8885135)] 2021-10-25 09:36:11.347 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035056: ['FBtr0072370'] 2021-10-25 09:36:11.368 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035056 has a single transcript. 2021-10-25 09:36:11.371 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21035721, 21035830), (21035721, 21036398), (21036090, 21036398), (21036470, 21036538), (21036637, 21037609), (21036637, 21038745), (21037994, 21038745), (21039946, 21040014)] 2021-10-25 09:36:11.373 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.374 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.377 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035057: ['FBtr0072371'] 2021-10-25 09:36:11.377 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035057 has a single transcript. 2021-10-25 09:36:11.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035059: ['FBtr0300130'] 2021-10-25 09:36:11.384 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035059 has a single transcript. 2021-10-25 09:36:11.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035060: ['FBtr0072433', 'FBtr0072434', 'FBtr0072435', 'FBtr0308684'] 2021-10-25 09:36:11.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24769360, 24769418), (24769683, 24771724), (24770061, 24771724), (24771324, 24771724), (24771790, 24771848), (24772037, 24772097), (24772541, 24772597), (24772795, 24773211), (24772795, 24772940), (24773003, 24773211), (24773301, 24773361), (24773683, 24773741), (24774505, 24774576), (24774813, 24774907)] 2021-10-25 09:36:11.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264443: ['FBtr0332564', 'FBtr0332565', 'FBtr0332566', 'FBtr0345432'] 2021-10-25 09:36:11.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031146: ['FBtr0077266'] 2021-10-25 09:36:11.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031146 has a single transcript. 2021-10-25 09:36:11.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031148: ['FBtr0077244', 'FBtr0077245', 'FBtr0340437'] 2021-10-25 09:36:11.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21045349, 21047187), (21046854, 21047187), (21047412, 21047556), (21048598, 21048664)] 2021-10-25 09:36:11.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19970240, 19970519), (19970461, 19970519), (19971317, 19971405), (19971990, 19982566), (19982612, 19999336), (19999373, 20016819)] 2021-10-25 09:36:11.637 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.659 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0332564': ['FBtr0332566']} 2021-10-25 09:36:11.659 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0332566']] 2021-10-25 09:36:11.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035063: ['FBtr0072374'] 2021-10-25 09:36:11.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035063 has a single transcript. 2021-10-25 09:36:11.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035064: ['FBtr0072429'] 2021-10-25 09:36:11.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035064 has a single transcript. 2021-10-25 09:36:11.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035065: ['FBtr0072375'] 2021-10-25 09:36:11.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035065 has a single transcript. 2021-10-25 09:36:11.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035068: ['FBtr0072376'] 2021-10-25 09:36:11.710 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035068 has a single transcript. 2021-10-25 09:36:11.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035069: ['FBtr0072377', 'FBtr0345679', 'FBtr0339275'] 2021-10-25 09:36:11.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031149: ['FBtr0077264', 'FBtr0345923'] 2021-10-25 09:36:11.767 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264444: ['FBtr0332567'] 2021-10-25 09:36:11.767 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264444 has a single transcript. 2021-10-25 09:36:11.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264445: ['FBtr0332568'] 2021-10-25 09:36:11.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264445 has a single transcript. 2021-10-25 09:36:11.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264446: ['FBtr0332584', 'FBtr0344829'] 2021-10-25 09:36:11.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24799005, 24799065)] 2021-10-25 09:36:11.795 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24798797, 24799562, 'FBtr0072377_exon_1') contains intron (24799005, 24799065) 2021-10-25 09:36:11.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072377_exon_1'] 2021-10-25 09:36:11.796 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21050825, 21051125), (21051605, 21051915), (21052203, 21052409), (21052799, 21052897), (21053226, 21053610)] 2021-10-25 09:36:11.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.844 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1902491, 1902552), (1902491, 1902538)] 2021-10-25 09:36:11.846 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.846 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011288: ['FBtr0111143', 'FBtr0304625'] 2021-10-25 09:36:11.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031150: ['FBtr0077246', 'FBtr0077247', 'FBtr0332845', 'FBtr0332846'] 2021-10-25 09:36:11.912 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24074310, 24079464), (24079558, 24131195), (24131237, 24167762), (24131237, 24161130), (24161179, 24210020), (24167811, 24210020), (24210138, 24253792), (24253921, 24258491), (24258636, 24297680)] 2021-10-25 09:36:11.913 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:11.914 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:11.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035070: ['FBtr0072380'] 2021-10-25 09:36:11.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035070 has a single transcript. 2021-10-25 09:36:11.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264447: ['FBtr0332596'] 2021-10-25 09:36:11.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264447 has a single transcript. 2021-10-25 09:36:11.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264448: ['FBtr0332601'] 2021-10-25 09:36:11.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035073: ['FBtr0072423'] 2021-10-25 09:36:11.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264448 has a single transcript. 2021-10-25 09:36:11.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035073 has a single transcript. 2021-10-25 09:36:11.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035076: ['FBtr0072420'] 2021-10-25 09:36:11.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035076 has a single transcript. 2021-10-25 09:36:11.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035077: ['FBtr0114563'] 2021-10-25 09:36:11.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035077 has a single transcript. 2021-10-25 09:36:11.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264449: ['FBtr0332604', 'FBtr0332605', 'FBtr0332606', 'FBtr0332609', 'FBtr0332610', 'FBtr0332611', 'FBtr0332612', 'FBtr0343358', 'FBtr0343359', 'FBtr0343360'] 2021-10-25 09:36:11.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035078: ['FBtr0304800'] 2021-10-25 09:36:11.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035078 has a single transcript. 2021-10-25 09:36:11.959 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035082: ['FBtr0072412', 'FBtr0309243', 'FBtr0345515'] 2021-10-25 09:36:11.997 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011289: ['FBtr0085154', 'FBtr0085155', 'FBtr0085156'] 2021-10-25 09:36:11.998 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21054322, 21060491), (21054742, 21060491), (21061557, 21075364), (21075522, 21075591), (21075694, 21075772), (21075922, 21076040), (21076182, 21080046), (21076182, 21080779), (21076182, 21076964), (21080079, 21080779)] 2021-10-25 09:36:12.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.000 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24939854, 24939905), (24940013, 24940071)] 2021-10-25 09:36:12.046 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24939705, 24940013, 'FBtr0072412_exon_2') contains intron (24939854, 24939905) 2021-10-25 09:36:12.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072412_exon_2'] 2021-10-25 09:36:12.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.084 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27251161, 27254527), (27253625, 27254527), (27254728, 27255015), (27254728, 27255089), (27255024, 27255089), (27255395, 27255455), (27255663, 27255725), (27255970, 27256033)] 2021-10-25 09:36:12.086 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035083: ['FBtr0072411', 'FBtr0100389'] 2021-10-25 09:36:12.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031155: ['FBtr0300353', 'FBtr0344534', 'FBtr0305148'] 2021-10-25 09:36:12.214 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011290: ['FBtr0082440', 'FBtr0082442', 'FBtr0290205', 'FBtr0335213'] 2021-10-25 09:36:12.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24941054, 24941121), (24941441, 24942249)] 2021-10-25 09:36:12.227 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.228 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(810957, 811026), (811368, 818405), (811368, 818435), (811368, 811593), (811689, 818405), (811689, 818435), (818615, 818679), (818792, 818850), (819133, 819210), (819633, 819692), (819826, 820504), (820078, 820504), (821969, 839865), (821969, 843111), (821969, 836025), (843174, 880918), (843174, 893221), (881788, 884321), (881788, 884394), (893314, 893467), (894305, 908749), (894305, 927856), (894305, 899183)] 2021-10-25 09:36:12.246 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21095900, 21101069), (21099612, 21101069), (21101928, 21102022), (21102051, 21102130)] 2021-10-25 09:36:12.280 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21102022, 21102206, 'FBtr0300353_exon_1') contains intron (21102051, 21102130) 2021-10-25 09:36:12.281 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21102022, 21102206, 'FBtr0344534_exon_1') contains intron (21102051, 21102130) 2021-10-25 09:36:12.281 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300353_exon_1', 'FBtr0344534_exon_1'] 2021-10-25 09:36:12.282 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035084: ['FBtr0072410', 'FBtr0343512'] 2021-10-25 09:36:12.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11678872, 11678943), (11679184, 11679566), (11679184, 11679353), (11679398, 11679566)] 2021-10-25 09:36:12.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11678943, 11679398, 'FBtr0082440_exon_2') contains intron (11679184, 11679353) 2021-10-25 09:36:12.344 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11678943, 11679690, 'FBtr0082442_exon_1') contains intron (11679184, 11679566) 2021-10-25 09:36:12.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082440_exon_2', 'FBtr0082442_exon_1'] 2021-10-25 09:36:12.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24943765, 24943822), (24943933, 24944018), (24944854, 24944959)] 2021-10-25 09:36:12.374 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.410 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031157: ['FBtr0077260', 'FBtr0344414'] 2021-10-25 09:36:12.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035085: ['FBtr0072393', 'FBtr0343502'] 2021-10-25 09:36:12.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21105349, 21105619)] 2021-10-25 09:36:12.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.501 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24946163, 24946218), (24946332, 24946382)] 2021-10-25 09:36:12.502 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.502 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011291: ['FBtr0079924'] 2021-10-25 09:36:12.513 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011291 has a single transcript. 2021-10-25 09:36:12.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011293: ['FBtr0075290'] 2021-10-25 09:36:12.524 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011293 has a single transcript. 2021-10-25 09:36:12.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011294: ['FBtr0077922'] 2021-10-25 09:36:12.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011294 has a single transcript. 2021-10-25 09:36:12.539 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011296: ['FBtr0072100', 'FBtr0336685'] 2021-10-25 09:36:12.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031159: ['FBtr0100609'] 2021-10-25 09:36:12.545 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031159 has a single transcript. 2021-10-25 09:36:12.557 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031161: ['FBtr0077250', 'FBtr0310641', 'FBtr0310642', 'FBtr0310643', 'FBtr0310644'] 2021-10-25 09:36:12.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035086: ['FBtr0300763', 'FBtr0343503', 'FBtr0345514'] 2021-10-25 09:36:12.590 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23684932, 23684994), (23685382, 23685475), (23685385, 23685475)] 2021-10-25 09:36:12.591 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011297: ['FBtr0072095'] 2021-10-25 09:36:12.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011297 has a single transcript. 2021-10-25 09:36:12.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011300: ['FBtr0088658', 'FBtr0088659', 'FBtr0300599'] 2021-10-25 09:36:12.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24949402, 24949590), (24949866, 24949923), (24950851, 24950954), (24951510, 24951580), (24951510, 24951583), (24952003, 24952059), (24952254, 24952311), (24953000, 24953052)] 2021-10-25 09:36:12.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.704 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21117404, 21117458), (21117404, 21117462), (21117411, 21117462), (21117411, 21117458), (21117615, 21118315), (21118771, 21118861), (21119662, 21119778)] 2021-10-25 09:36:12.705 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21117158, 21117615, 'FBtr0077250_exon_1') contains intron (21117404, 21117458) 2021-10-25 09:36:12.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077250_exon_1'] 2021-10-25 09:36:12.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264460: ['FBtr0332780', 'FBtr0332781'] 2021-10-25 09:36:12.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8953029, 8953102), (8953417, 8954733), (8954851, 8957028), (8954851, 8955712), (8954851, 8954958), (8955167, 8959106), (8955858, 8959106), (8957156, 8959106), (8959334, 8959399), (8959633, 8959689), (8960213, 8960276)] 2021-10-25 09:36:12.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12498642, 12500018), (12498642, 12499601), (12499769, 12500018), (12500133, 12500200)] 2021-10-25 09:36:12.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:12.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035087: ['FBtr0113118', 'FBtr0113119', 'FBtr0308686', 'FBtr0308687'] 2021-10-25 09:36:12.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264462: ['FBtr0332783'] 2021-10-25 09:36:12.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264462 has a single transcript. 2021-10-25 09:36:12.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264464: ['FBtr0332774'] 2021-10-25 09:36:12.877 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264464 has a single transcript. 2021-10-25 09:36:12.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264466: ['FBtr0332784'] 2021-10-25 09:36:12.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264466 has a single transcript. 2021-10-25 09:36:12.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264467: ['FBtr0332776'] 2021-10-25 09:36:12.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264467 has a single transcript. 2021-10-25 09:36:12.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264468: ['FBtr0344956', 'FBtr0332778', 'FBtr0332779'] 2021-10-25 09:36:12.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24961503, 24961605), (24961747, 24964571), (24961747, 24962981), (24961747, 24962342)] 2021-10-25 09:36:12.932 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24961605, 24962590, 'FBtr0308686_exon_1') contains intron (24961747, 24962342) 2021-10-25 09:36:12.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308686_exon_1'] 2021-10-25 09:36:12.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:12.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031163: ['FBtr0077256'] 2021-10-25 09:36:12.942 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031163 has a single transcript. 2021-10-25 09:36:12.949 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031164: ['FBtr0077257'] 2021-10-25 09:36:12.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031164 has a single transcript. 2021-10-25 09:36:12.956 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031168: ['FBtr0077237'] 2021-10-25 09:36:12.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031168 has a single transcript. 2021-10-25 09:36:12.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031169: ['FBtr0332306', 'FBtr0332307'] 2021-10-25 09:36:12.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20265688, 20265745), (20265806, 20265865), (20266010, 20266076)] 2021-10-25 09:36:12.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20265745, 20266010, 'FBtr0344956_exon_2') contains intron (20265806, 20265865) 2021-10-25 09:36:12.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20265745, 20266200, 'FBtr0332779_exon_1') contains intron (20265806, 20265865) 2021-10-25 09:36:12.998 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344956_exon_2', 'FBtr0332779_exon_1'] 2021-10-25 09:36:12.998 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.024 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21286229, 21286294), (21286438, 21286760), (21288053, 21288120), (21288500, 21288722), (21289175, 21289402), (21289743, 21289895), (21290219, 21290284), (21290633, 21291131), (21291881, 21291952)] 2021-10-25 09:36:13.025 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.026 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011305: ['FBtr0080079', 'FBtr0333411'] 2021-10-25 09:36:13.080 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:13.082 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.082 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031170: ['FBtr0306679', 'FBtr0332488', 'FBtr0332489'] 2021-10-25 09:36:13.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035088: ['FBtr0072395', 'FBtr0343504', 'FBtr0343505'] 2021-10-25 09:36:13.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264469: ['FBtr0332793'] 2021-10-25 09:36:13.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264469 has a single transcript. 2021-10-25 09:36:13.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264470: ['FBtr0332737'] 2021-10-25 09:36:13.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264470 has a single transcript. 2021-10-25 09:36:13.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264471: ['FBtr0332739'] 2021-10-25 09:36:13.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264471 has a single transcript. 2021-10-25 09:36:13.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264472: ['FBtr0332786'] 2021-10-25 09:36:13.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264472 has a single transcript. 2021-10-25 09:36:13.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264473: ['FBtr0332740', 'FBtr0332741'] 2021-10-25 09:36:13.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011327: ['FBtr0076472', 'FBtr0333867'] 2021-10-25 09:36:13.191 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21292930, 21293341), (21292930, 21293155), (21293530, 21293592), (21294366, 21294510), (21294687, 21294744), (21294895, 21295099), (21295952, 21296016), (21296384, 21296449), (21296786, 21296849), (21298274, 21298345), (21298934, 21299543), (21298934, 21300150), (21299609, 21300150), (21300435, 21305529), (21300435, 21302626), (21305743, 21306094), (21305743, 21306334)] 2021-10-25 09:36:13.192 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21292307, 21293530, 'FBtr0306679_exon_13') contains intron (21292930, 21293341) 2021-10-25 09:36:13.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306679_exon_13'] 2021-10-25 09:36:13.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24969746, 24969812), (24970200, 24970252), (24970417, 24970659), (24970548, 24970604)] 2021-10-25 09:36:13.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.208 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9476692, 9476771)] 2021-10-25 09:36:13.213 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.214 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4755701, 4755820)] 2021-10-25 09:36:13.216 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4755604, 4756142, 'FBtr0332741_exon_1') contains intron (4755701, 4755820) 2021-10-25 09:36:13.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332741_exon_1'] 2021-10-25 09:36:13.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.285 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011335: ['FBtr0075991'] 2021-10-25 09:36:13.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011335 has a single transcript. 2021-10-25 09:36:13.287 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264474: ['FBtr0332743'] 2021-10-25 09:36:13.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264474 has a single transcript. 2021-10-25 09:36:13.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264475: ['FBtr0332751'] 2021-10-25 09:36:13.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264475 has a single transcript. 2021-10-25 09:36:13.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011336: ['FBtr0084786'] 2021-10-25 09:36:13.298 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011336 has a single transcript. 2021-10-25 09:36:13.306 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264476: ['FBtr0332753'] 2021-10-25 09:36:13.306 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264476 has a single transcript. 2021-10-25 09:36:13.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011361: ['FBtr0072676', 'FBtr0072677', 'FBtr0331864'] 2021-10-25 09:36:13.312 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031171: ['FBtr0300938'] 2021-10-25 09:36:13.312 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031171 has a single transcript. 2021-10-25 09:36:13.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264477: ['FBtr0332757'] 2021-10-25 09:36:13.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264477 has a single transcript. 2021-10-25 09:36:13.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264478: ['FBtr0332759'] 2021-10-25 09:36:13.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264478 has a single transcript. 2021-10-25 09:36:13.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031174: ['FBtr0077190', 'FBtr0077191'] 2021-10-25 09:36:13.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264479: ['FBtr0332763'] 2021-10-25 09:36:13.328 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264479 has a single transcript. 2021-10-25 09:36:13.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035089: ['FBtr0072404', 'FBtr0343509', 'FBtr0343510'] 2021-10-25 09:36:13.340 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264480: ['FBtr0332767'] 2021-10-25 09:36:13.340 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264480 has a single transcript. 2021-10-25 09:36:13.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264481: ['FBtr0332770'] 2021-10-25 09:36:13.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264481 has a single transcript. 2021-10-25 09:36:13.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264482: ['FBtr0344582'] 2021-10-25 09:36:13.357 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264482 has a single transcript. 2021-10-25 09:36:13.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264483: ['FBtr0344761'] 2021-10-25 09:36:13.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264483 has a single transcript. 2021-10-25 09:36:13.375 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264484: ['FBtr0332795', 'FBtr0332796'] 2021-10-25 09:36:13.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21324147, 21324234), (21324571, 21324709), (21325822, 21325888), (21326170, 21326227), (21326743, 21326802), (21326996, 21327060)] 2021-10-25 09:36:13.376 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21324066, 21324571, 'FBtr0077191_exon_1') contains intron (21324147, 21324234) 2021-10-25 09:36:13.377 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077191_exon_1'] 2021-10-25 09:36:13.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1330047, 1330130), (1330290, 1330862), (1330290, 1331041), (1330949, 1331041), (1330964, 1331279), (1331170, 1331279)] 2021-10-25 09:36:13.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.426 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24971317, 24971774), (24971317, 24973047)] 2021-10-25 09:36:13.428 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.428 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.428 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19240032, 19240085), (19240032, 19240089)] 2021-10-25 09:36:13.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031176: ['FBtr0077219', 'FBtr0346383'] 2021-10-25 09:36:13.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:13.495 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.495 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264485: ['FBtr0332794'] 2021-10-25 09:36:13.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264485 has a single transcript. 2021-10-25 09:36:13.512 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264486: ['FBtr0332802', 'FBtr0332803', 'FBtr0332804', 'FBtr0332805'] 2021-10-25 09:36:13.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011455: ['FBtr0076023', 'FBtr0334094'] 2021-10-25 09:36:13.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035090: ['FBtr0072403'] 2021-10-25 09:36:13.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035090 has a single transcript. 2021-10-25 09:36:13.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031178: ['FBtr0077218'] 2021-10-25 09:36:13.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031178 has a single transcript. 2021-10-25 09:36:13.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035091: ['FBtr0072396', 'FBtr0343506'] 2021-10-25 09:36:13.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031181: ['FBtr0077213'] 2021-10-25 09:36:13.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031181 has a single transcript. 2021-10-25 09:36:13.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031182: ['FBtr0077212'] 2021-10-25 09:36:13.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031182 has a single transcript. 2021-10-25 09:36:13.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12137778, 12137837), (12137944, 12138015), (12138245, 12138316)] 2021-10-25 09:36:13.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.580 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031183: ['FBtr0077344', 'FBtr0342876', 'FBtr0339557', 'FBtr0339558'] 2021-10-25 09:36:13.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.608 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24987187, 24988187), (24987826, 24988187), (24988470, 24988530), (24988622, 24988679), (24988907, 24988961), (24989234, 24989291), (24989883, 24989942)] 2021-10-25 09:36:13.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.631 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12890284, 12890342), (12890471, 12891653), (12890471, 12890539), (12890471, 12891141)] 2021-10-25 09:36:13.633 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.633 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.656 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011474: ['FBtr0082929', 'FBtr0082930', 'FBtr0309996'] 2021-10-25 09:36:13.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035092: ['FBtr0072443', 'FBtr0110861', 'FBtr0290092'] 2021-10-25 09:36:13.695 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22444756, 22444817), (22445042, 22445127), (22445308, 22445774), (22445983, 22446048), (22446174, 22446530)] 2021-10-25 09:36:13.696 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22444748, 22445308, 'FBtr0077344_exon_1') contains intron (22444756, 22444817) 2021-10-25 09:36:13.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22444226, 22445308, 'FBtr0342876_exon_1') contains intron (22444756, 22444817) 2021-10-25 09:36:13.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22444817, 22445308, 'FBtr0339557_exon_2') contains intron (22445042, 22445127) 2021-10-25 09:36:13.698 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22444748, 22445042, 'FBtr0339558_exon_1') contains intron (22444756, 22444817) 2021-10-25 09:36:13.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077344_exon_1', 'FBtr0342876_exon_1', 'FBtr0339557_exon_2', 'FBtr0339558_exon_1'] 2021-10-25 09:36:13.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.739 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14316203, 14316310), (14316203, 14316476), (14316371, 14316476), (14316380, 14316476), (14316867, 14316938)] 2021-10-25 09:36:13.740 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25032679, 25036592), (25036712, 25036848), (25037530, 25037701), (25037530, 25039050), (25037964, 25039050), (25037970, 25039050)] 2021-10-25 09:36:13.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264487: ['FBtr0332814'] 2021-10-25 09:36:13.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264487 has a single transcript. 2021-10-25 09:36:13.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264488: ['FBtr0332816', 'FBtr0332817', 'FBtr0345688'] 2021-10-25 09:36:13.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031184: ['FBtr0077369', 'FBtr0339499'] 2021-10-25 09:36:13.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011476: ['FBtr0301089', 'FBtr0334696'] 2021-10-25 09:36:13.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22448136, 22448531)] 2021-10-25 09:36:13.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035094: ['FBtr0333172', 'FBtr0333173', 'FBtr0333170', 'FBtr0333171'] 2021-10-25 09:36:13.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15278441, 15278502)] 2021-10-25 09:36:13.905 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11976170, 11976229), (11976495, 11976573), (11978400, 11978502), (11978667, 11978734), (11978914, 11978984), (11979152, 11979203), (11979392, 11979459), (11979642, 11979699), (11979891, 11979949), (11980699, 11981127)] 2021-10-25 09:36:13.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:13.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:13.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011481: ['FBtr0083611', 'FBtr0083612', 'FBtr0083613', 'FBtr0330051'] 2021-10-25 09:36:13.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031187: ['FBtr0077346', 'FBtr0077347', 'FBtr0077348', 'FBtr0077349', 'FBtr0309238', 'FBtr0309239', 'FBtr0392899', 'FBtr0339506', 'FBtr0339507'] 2021-10-25 09:36:14.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25184250, 25184305), (25184653, 25184703), (25184846, 25184908), (25185032, 25186825), (25185762, 25185819), (25185876, 25185931), (25186276, 25186327), (25186470, 25186542), (25186675, 25186825), (25188223, 25207728), (25188223, 25188776), (25188223, 25189848), (25207849, 25243428), (25243834, 25255008)] 2021-10-25 09:36:14.017 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.061 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264489: ['FBtr0332819', 'FBtr0332820', 'FBtr0332821', 'FBtr0332822', 'FBtr0332823', 'FBtr0332824', 'FBtr0332825', 'FBtr0332826', 'FBtr0332827', 'FBtr0332828', 'FBtr0332829', 'FBtr0332830', 'FBtr0332831', 'FBtr0332832', 'FBtr0332833', 'FBtr0332834', 'FBtr0332835'] 2021-10-25 09:36:14.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18197108, 18198701), (18197120, 18199206), (18197120, 18198701)] 2021-10-25 09:36:14.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035097: ['FBtr0072541', 'FBtr0305595'] 2021-10-25 09:36:14.235 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22455863, 22457426), (22456559, 22457426), (22457191, 22457426), (22457551, 22457613), (22458260, 22466164), (22458260, 22462399), (22458260, 22462713), (22458260, 22463538), (22463272, 22463691), (22463272, 22463538), (22463272, 22466164), (22465522, 22466164), (22465558, 22466164), (22466375, 22466811), (22466744, 22466811), (22466958, 22467018), (22467232, 22467295), (22467618, 22467715), (22467865, 22467921), (22468000, 22468111)] 2021-10-25 09:36:14.239 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.245 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(74391, 74453)] 2021-10-25 09:36:14.246 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.246 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.272 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011509: ['FBtr0076598', 'FBtr0333891'] 2021-10-25 09:36:14.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8719588, 8719645), (8719952, 8720037)] 2021-10-25 09:36:14.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035099: ['FBtr0273351', 'FBtr0273352', 'FBtr0273353'] 2021-10-25 09:36:14.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(146706, 146771), (147082, 147137), (147082, 148461), (147398, 147452), (147666, 147729), (147883, 147935), (148413, 148461), (148645, 148703), (148841, 148894)] 2021-10-25 09:36:14.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (146771, 147398, 'FBtr0273353_exon_2') contains intron (147082, 147137) 2021-10-25 09:36:14.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (147452, 147883, 'FBtr0273353_exon_3') contains intron (147666, 147729) 2021-10-25 09:36:14.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0273353_exon_2', 'FBtr0273353_exon_3'] 2021-10-25 09:36:14.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011554: ['FBtr0088163'] 2021-10-25 09:36:14.404 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011554 has a single transcript. 2021-10-25 09:36:14.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011555: ['FBtr0088162'] 2021-10-25 09:36:14.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011555 has a single transcript. 2021-10-25 09:36:14.423 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011556: ['FBtr0088164'] 2021-10-25 09:36:14.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011556 has a single transcript. 2021-10-25 09:36:14.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011559: ['FBtr0081054', 'FBtr0340581'] 2021-10-25 09:36:14.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18358753, 18358812)] 2021-10-25 09:36:14.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.491 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035101: ['FBtr0072475', 'FBtr0301889', 'FBtr0299864', 'FBtr0299865', 'FBtr0299866'] 2021-10-25 09:36:14.570 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9813922, 9820279), (9813922, 9820073), (9813927, 9820279), (9813961, 9820279), (9816357, 9820073), (9819253, 9820073), (9820559, 9824545), (9821908, 9824545), (9824640, 9830633), (9824640, 9824802), (9824640, 9824820), (9827895, 9830633), (9830069, 9830633), (9830785, 9832477), (9830785, 9832198), (9830785, 9832195), (9830785, 9832201), (9830785, 9830999), (9830785, 9831920), (9831440, 9832195), (9831440, 9832198), (9831440, 9832201), (9831440, 9831920), (9832679, 9832738), (9832866, 9832927)] 2021-10-25 09:36:14.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011566: ['FBtr0070447'] 2021-10-25 09:36:14.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011566 has a single transcript. 2021-10-25 09:36:14.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011569: ['FBtr0076299'] 2021-10-25 09:36:14.586 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011569 has a single transcript. 2021-10-25 09:36:14.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011570: ['FBtr0077881', 'FBtr0331630'] 2021-10-25 09:36:14.650 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1705114, 1705399), (1705280, 1705399)] 2021-10-25 09:36:14.651 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(153304, 167475), (161371, 167475), (167619, 168580), (168850, 172060), (171868, 171935), (171868, 172060), (171979, 172060)] 2021-10-25 09:36:14.680 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (171740, 171979, 'FBtr0072475_exon_1') contains intron (171868, 171935) 2021-10-25 09:36:14.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072475_exon_1'] 2021-10-25 09:36:14.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031188: ['FBtr0077367', 'FBtr0335047'] 2021-10-25 09:36:14.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011573: ['FBtr0072777'] 2021-10-25 09:36:14.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011573 has a single transcript. 2021-10-25 09:36:14.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011576: ['FBtr0070387', 'FBtr0345609'] 2021-10-25 09:36:14.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22470451, 22470513), (22470978, 22471141), (22471287, 22471348)] 2021-10-25 09:36:14.754 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22470258, 22470978, 'FBtr0077367_exon_3') contains intron (22470451, 22470513) 2021-10-25 09:36:14.755 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077367_exon_3'] 2021-10-25 09:36:14.755 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.788 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2177063, 2177150), (2177537, 2177593), (2177663, 2177720), (2178280, 2178336)] 2021-10-25 09:36:14.790 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.790 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031189: ['FBtr0077351'] 2021-10-25 09:36:14.832 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031189 has a single transcript. 2021-10-25 09:36:14.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031190: ['FBtr0077365', 'FBtr0077366', 'FBtr0346429', 'FBtr0335046'] 2021-10-25 09:36:14.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011581: ['FBtr0084607', 'FBtr0346341', 'FBtr0334600'] 2021-10-25 09:36:14.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035102: ['FBtr0072537'] 2021-10-25 09:36:14.932 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035102 has a single transcript. 2021-10-25 09:36:14.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24341680, 24342827), (24342630, 24342827), (24343039, 24343102)] 2021-10-25 09:36:14.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:14.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035103: ['FBtr0072534', 'FBtr0072535', 'FBtr0072536', 'FBtr0301890', 'FBtr0334069'] 2021-10-25 09:36:14.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22476452, 22477178), (22477483, 22480511), (22480895, 22481914), (22480898, 22482104), (22480898, 22481914)] 2021-10-25 09:36:14.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:14.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(177079, 177145), (177328, 177381), (177873, 178021), (177873, 178496), (177873, 178235), (177873, 178832), (178305, 178496)] 2021-10-25 09:36:15.066 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (177381, 178305, 'FBtr0301890_exon_2') contains intron (177873, 178021) 2021-10-25 09:36:15.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301890_exon_2'] 2021-10-25 09:36:15.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011582: ['FBtr0290283', 'FBtr0301351', 'FBtr0308191', 'FBtr0330711', 'FBtr0346763'] 2021-10-25 09:36:15.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031191: ['FBtr0077353', 'FBtr0077352', 'FBtr0100650', 'FBtr0100651', 'FBtr0100652', 'FBtr0310475', 'FBtr0339500', 'FBtr0339501'] 2021-10-25 09:36:15.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14178460, 14180206), (14180452, 14191738), (14191868, 14204250), (14204430, 14204706), (14204430, 14204751), (14204812, 14213989)] 2021-10-25 09:36:15.204 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.228 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0290283': ['FBtr0330711', 'FBtr0346763']} 2021-10-25 09:36:15.228 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330711', 'FBtr0346763']] 2021-10-25 09:36:15.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035104: ['FBtr0072476', 'FBtr0334068'] 2021-10-25 09:36:15.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011584: ['FBtr0079931', 'FBtr0079932', 'FBtr0343741', 'FBtr0305986'] 2021-10-25 09:36:15.352 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(179991, 180739), (180649, 180739), (181088, 181147), (181431, 181489), (181680, 181742)] 2021-10-25 09:36:15.354 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.354 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22482396, 22482475), (22482396, 22482449), (22482487, 22482556), (22482540, 22482664), (22482750, 22482838), (22482750, 22482841), (22483022, 22483086), (22484526, 22485401), (22484526, 22485236), (22485635, 22485956), (22485635, 22485942), (22485635, 22487057), (22486084, 22487057)] 2021-10-25 09:36:15.366 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482394, 22482750, 'FBtr0077353_exon_1') contains intron (22482396, 22482475) 2021-10-25 09:36:15.367 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482394, 22482540, 'FBtr0077352_exon_1') contains intron (22482396, 22482475) 2021-10-25 09:36:15.368 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482394, 22482750, 'FBtr0100650_exon_1') contains intron (22482396, 22482475) 2021-10-25 09:36:15.368 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482449, 22482750, 'FBtr0100651_exon_2') contains intron (22482487, 22482556) 2021-10-25 09:36:15.369 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482394, 22482750, 'FBtr0100652_exon_1') contains intron (22482396, 22482475) 2021-10-25 09:36:15.370 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22482394, 22482487, 'FBtr0339501_exon_1') contains intron (22482396, 22482475) 2021-10-25 09:36:15.370 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077353_exon_1', 'FBtr0077352_exon_1', 'FBtr0100650_exon_1', 'FBtr0100651_exon_2', 'FBtr0100652_exon_1', 'FBtr0339501_exon_1'] 2021-10-25 09:36:15.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035106: ['FBtr0072532', 'FBtr0305548', 'FBtr0305549'] 2021-10-25 09:36:15.447 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10009536, 10010736), (10010557, 10010736), (10011552, 10011606), (10011908, 10012399)] 2021-10-25 09:36:15.449 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.449 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264490: ['FBtr0084169', 'FBtr0330384', 'FBtr0112874'] 2021-10-25 09:36:15.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(196603, 196672), (197289, 197347), (197537, 197589), (197806, 197879), (198074, 198135), (198689, 198761), (199087, 199678), (199087, 199626), (199087, 199462)] 2021-10-25 09:36:15.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21949402, 21949639), (21949872, 21960763), (21960907, 21995519), (21972461, 21975625), (21976054, 21995519), (21995771, 21995837), (21996055, 21996329), (21996787, 22003959)] 2021-10-25 09:36:15.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.570 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084169': ['FBtr0330384']} 2021-10-25 09:36:15.571 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330384']] 2021-10-25 09:36:15.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035107: ['FBtr0072480', 'FBtr0072481', 'FBtr0346614'] 2021-10-25 09:36:15.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264491: ['FBtr0301402', 'FBtr0084177', 'FBtr0301401', 'FBtr0100514', 'FBtr0084178', 'FBtr0335195'] 2021-10-25 09:36:15.640 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011586: ['FBtr0071266', 'FBtr0071267', 'FBtr0310067', 'FBtr0333604', 'FBtr0333605'] 2021-10-25 09:36:15.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(200297, 200389), (201060, 201173), (201060, 201170), (201368, 201440), (201758, 201816)] 2021-10-25 09:36:15.704 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (200173, 201060, 'FBtr0072481_exon_1') contains intron (200297, 200389) 2021-10-25 09:36:15.704 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (200173, 201060, 'FBtr0346614_exon_1') contains intron (200297, 200389) 2021-10-25 09:36:15.704 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072481_exon_1', 'FBtr0346614_exon_1'] 2021-10-25 09:36:15.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031194: ['FBtr0077364', 'FBtr0333716'] 2021-10-25 09:36:15.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8905384, 8905504), (8905384, 8906108), (8905588, 8905768), (8905588, 8905909), (8905588, 8906108), (8905588, 8905901)] 2021-10-25 09:36:15.783 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.784 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22042355, 22042906), (22043379, 22062724), (22062858, 22069110), (22069227, 22070806), (22070947, 22071332), (22071429, 22071738), (22071429, 22071696), (22072041, 22072931), (22072041, 22074448), (22072041, 22074451), (22074944, 22077283), (22074944, 22077363)] 2021-10-25 09:36:15.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22536994, 22537255), (22538721, 22539741)] 2021-10-25 09:36:15.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035109: ['FBtr0072484'] 2021-10-25 09:36:15.829 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035109 has a single transcript. 2021-10-25 09:36:15.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035110: ['FBtr0072526', 'FBtr0072527'] 2021-10-25 09:36:15.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031195: ['FBtr0077358', 'FBtr0077359', 'FBtr0333713', 'FBtr0333714'] 2021-10-25 09:36:15.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(212379, 212444), (212556, 212617), (212559, 212617)] 2021-10-25 09:36:15.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:15.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:15.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035111: ['FBtr0072486', 'FBtr0072487'] 2021-10-25 09:36:15.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011589: ['FBtr0086802', 'FBtr0340287'] 2021-10-25 09:36:16.006 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(212784, 212843), (213976, 214031), (215451, 215504), (215624, 215682)] 2021-10-25 09:36:16.007 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (212708, 213976, 'FBtr0072487_exon_1') contains intron (212784, 212843) 2021-10-25 09:36:16.007 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072487_exon_1'] 2021-10-25 09:36:16.007 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22515288, 22515369), (22515593, 22528028), (22528581, 22528741), (22529212, 22529269), (22529391, 22540759), (22540488, 22540759), (22540584, 22540759), (22540877, 22540939), (22540886, 22540939), (22541068, 22541344)] 2021-10-25 09:36:16.012 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22515196, 22515593, 'FBtr0077358_exon_1') contains intron (22515288, 22515369) 2021-10-25 09:36:16.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077358_exon_1'] 2021-10-25 09:36:16.014 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17873979, 17874933), (17875048, 17898250), (17898379, 17901707), (17901818, 17901959), (17902079, 17903541), (17903679, 17907661), (17903679, 17907646), (17907906, 17908365), (17908594, 17909079), (17909243, 17912677), (17912879, 17914088), (17912879, 17914100), (17914280, 17914786), (17914905, 17915413), (17915494, 17918747), (17918843, 17921141), (17921295, 17921898), (17922023, 17923620)] 2021-10-25 09:36:16.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.075 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035112: ['FBtr0300710', 'FBtr0304058'] 2021-10-25 09:36:16.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264492: ['FBtr0345138', 'FBtr0345139', 'FBtr0344974', 'FBtr0111141', 'FBtr0070043', 'FBtr0070044', 'FBtr0070042'] 2021-10-25 09:36:16.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011591: ['FBtr0078267'] 2021-10-25 09:36:16.122 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011591 has a single transcript. 2021-10-25 09:36:16.127 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(218195, 218279), (218195, 218282)] 2021-10-25 09:36:16.128 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.128 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011592: ['FBtr0087821', 'FBtr0087822', 'FBtr0339649'] 2021-10-25 09:36:16.174 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031196: ['FBtr0077363'] 2021-10-25 09:36:16.175 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031196 has a single transcript. 2021-10-25 09:36:16.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031197: ['FBtr0077361'] 2021-10-25 09:36:16.184 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031197 has a single transcript. 2021-10-25 09:36:16.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031201: ['FBtr0077343'] 2021-10-25 09:36:16.192 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031201 has a single transcript. 2021-10-25 09:36:16.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031208: ['FBtr0300689', 'FBtr0300690', 'FBtr0330654'] 2021-10-25 09:36:16.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035113: ['FBtr0072524', 'FBtr0072525'] 2021-10-25 09:36:16.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12529826, 12556572), (12557775, 12558444), (12557775, 12558417), (12557775, 12558870), (12559078, 12559543), (12559826, 12559891), (12560101, 12560158), (12561489, 12561547), (12561795, 12561855), (12562036, 12562683), (12562817, 12562889)] 2021-10-25 09:36:16.221 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.221 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.260 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(218160, 218260), (219645, 219712), (220444, 220506), (220582, 221255), (220582, 220641), (221524, 221588), (221878, 221960), (222216, 222269), (222513, 222584)] 2021-10-25 09:36:16.261 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.262 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.287 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8116, 8228), (8116, 8192), (8589, 8667)] 2021-10-25 09:36:16.289 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8192, 9484, 'FBtr0300689_exon_2') contains intron (8589, 8667) 2021-10-25 09:36:16.289 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8228, 9484, 'FBtr0330654_exon_2') contains intron (8589, 8667) 2021-10-25 09:36:16.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300689_exon_2', 'FBtr0330654_exon_2'] 2021-10-25 09:36:16.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23097474, 23097559), (23097757, 23100244), (23099723, 23100219), (23099723, 23102121), (23099723, 23100244), (23100357, 23102121), (23101095, 23102121)] 2021-10-25 09:36:16.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035120: ['FBtr0289972', 'FBtr0300711', 'FBtr0332106'] 2021-10-25 09:36:16.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011596: ['FBtr0084399'] 2021-10-25 09:36:16.355 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011596 has a single transcript. 2021-10-25 09:36:16.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011603: ['FBtr0077448', 'FBtr0077446', 'FBtr0077447', 'FBtr0301407', 'FBtr0301408'] 2021-10-25 09:36:16.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031209: ['FBtr0113008'] 2021-10-25 09:36:16.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031209 has a single transcript. 2021-10-25 09:36:16.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031213: ['FBtr0078101', 'FBtr0301733', 'FBtr0302164', 'FBtr0306540', 'FBtr0331680'] 2021-10-25 09:36:16.427 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(258395, 258450), (258763, 258822)] 2021-10-25 09:36:16.429 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.429 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4468361, 4468424), (4468601, 4468666), (4469618, 4469674), (4469767, 4469835), (4469965, 4470993), (4471128, 4471979), (4472158, 4472948), (4472158, 4473684), (4473976, 4474331), (4475296, 4476841), (4475318, 4476841), (4475318, 4476665), (4475375, 4476934)] 2021-10-25 09:36:16.516 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(71804, 71949), (72081, 74902), (72977, 74902), (73692, 73819), (73692, 74902), (73897, 74902), (74572, 74902), (75018, 75077)] 2021-10-25 09:36:16.553 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035121: ['FBtr0072519', 'FBtr0332107'] 2021-10-25 09:36:16.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(259913, 260310), (261746, 261977), (262818, 264117)] 2021-10-25 09:36:16.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264493: ['FBtr0301634', 'FBtr0301632', 'FBtr0301633', 'FBtr0100361', 'FBtr0334298'] 2021-10-25 09:36:16.693 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035122: ['FBtr0072503', 'FBtr0310415'] 2021-10-25 09:36:16.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011604: ['FBtr0087841', 'FBtr0087842', 'FBtr0087843'] 2021-10-25 09:36:16.756 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(265049, 265111)] 2021-10-25 09:36:16.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.758 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031214: ['FBtr0306541'] 2021-10-25 09:36:16.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031214 has a single transcript. 2021-10-25 09:36:16.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031216: ['FBtr0078103'] 2021-10-25 09:36:16.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031216 has a single transcript. 2021-10-25 09:36:16.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031217: ['FBtr0078104', 'FBtr0330636'] 2021-10-25 09:36:16.813 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13969330, 13969396), (13969539, 13969607), (13969786, 13969908), (13970204, 13970277), (13970439, 13970507), (13970629, 13970951), (13971102, 14023645), (13971102, 13981633), (13971102, 13971267), (13971102, 14026877), (14023894, 14025838), (14026944, 14031572)] 2021-10-25 09:36:16.815 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.823 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12636737, 12636843), (12636781, 12636843), (12636990, 12637053), (12637271, 12637338), (12637593, 12637654), (12639770, 12639829), (12639990, 12640051)] 2021-10-25 09:36:16.824 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12636670, 12636990, 'FBtr0087841_exon_1') contains intron (12636737, 12636843) 2021-10-25 09:36:16.825 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087841_exon_1'] 2021-10-25 09:36:16.825 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035124: ['FBtr0072507'] 2021-10-25 09:36:16.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035124 has a single transcript. 2021-10-25 09:36:16.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035131: ['FBtr0072574'] 2021-10-25 09:36:16.851 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035131 has a single transcript. 2021-10-25 09:36:16.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(102906, 103005), (103434, 103877), (103434, 103515)] 2021-10-25 09:36:16.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:16.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035132: ['FBtr0072572', 'FBtr0072573', 'FBtr0306564', 'FBtr0306565', 'FBtr0306566', 'FBtr0333903', 'FBtr0333904'] 2021-10-25 09:36:16.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031219: ['FBtr0078160', 'FBtr0336838'] 2021-10-25 09:36:16.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011606: ['FBtr0070448', 'FBtr0340093'] 2021-10-25 09:36:16.985 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:16.986 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:16.986 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.010 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2599718, 2599778), (2600275, 2600358), (2602622, 2602693), (2602845, 2602918), (2603598, 2603679)] 2021-10-25 09:36:17.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.012 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264494: ['FBtr0077885', 'FBtr0077886'] 2021-10-25 09:36:17.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031220: ['FBtr0078156', 'FBtr0078157', 'FBtr0078158', 'FBtr0078159', 'FBtr0100307', 'FBtr0100308', 'FBtr0100309', 'FBtr0100310', 'FBtr0330646'] 2021-10-25 09:36:17.077 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(333640, 333941), (333640, 334974), (334119, 334974), (334394, 334974), (334829, 334974), (335169, 335244), (335199, 335244), (335857, 335928), (336692, 340780), (336692, 338486), (336692, 342815), (338626, 338846)] 2021-10-25 09:36:17.078 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (338486, 339016, 'FBtr0072573_exon_1') contains intron (338626, 338846) 2021-10-25 09:36:17.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011638: ['FBtr0081374'] 2021-10-25 09:36:17.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011638 has a single transcript. 2021-10-25 09:36:17.080 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (338486, 339016, 'FBtr0333903_exon_1') contains intron (338626, 338846) 2021-10-25 09:36:17.080 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072573_exon_1', 'FBtr0333903_exon_1'] 2021-10-25 09:36:17.081 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011640: ['FBtr0076842', 'FBtr0076841', 'FBtr0076843', 'FBtr0076845', 'FBtr0076844'] 2021-10-25 09:36:17.116 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1732654, 1741659), (1738019, 1741659), (1742076, 1742142), (1742260, 1743344), (1743540, 1743633), (1743779, 1744922), (1745161, 1745220), (1745361, 1745718), (1746029, 1747691), (1747860, 1748773), (1748874, 1749517), (1749676, 1749741)] 2021-10-25 09:36:17.118 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.118 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264495: ['FBtr0303789', 'FBtr0303790', 'FBtr0303787', 'FBtr0303788', 'FBtr0334322'] 2021-10-25 09:36:17.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7339319, 7339412), (7339617, 7339961), (7339617, 7340051), (7339617, 7339867), (7339908, 7339961), (7340770, 7340875), (7341114, 7341352)] 2021-10-25 09:36:17.241 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7339867, 7340770, 'FBtr0076841_exon_2') contains intron (7339908, 7339961) 2021-10-25 09:36:17.242 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7339463, 7340770, 'FBtr0076845_exon_1') contains intron (7339617, 7339961) 2021-10-25 09:36:17.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076841_exon_2', 'FBtr0076845_exon_1'] 2021-10-25 09:36:17.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(117759, 117819), (118076, 118135), (118304, 118360), (118874, 118930), (119076, 119133), (119235, 119287), (119235, 119430), (119375, 119430), (119554, 119827), (120080, 120167), (120080, 120420), (120080, 121632), (120265, 120510), (120364, 120420)] 2021-10-25 09:36:17.334 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (119827, 121754, 'FBtr0078159_exon_1') contains intron (120080, 120167) 2021-10-25 09:36:17.334 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (119827, 120265, 'FBtr0100307_exon_2') contains intron (120080, 120167) 2021-10-25 09:36:17.335 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (119827, 120631, 'FBtr0100308_exon_1') contains intron (120080, 120167) 2021-10-25 09:36:17.336 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (119133, 119375, 'FBtr0100309_exon_4') contains intron (119235, 119287) 2021-10-25 09:36:17.336 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (119287, 119554, 'FBtr0100310_exon_3') contains intron (119375, 119430) 2021-10-25 09:36:17.337 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078159_exon_1', 'FBtr0100307_exon_2', 'FBtr0100308_exon_1', 'FBtr0100309_exon_4', 'FBtr0100310_exon_3'] 2021-10-25 09:36:17.337 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6407091, 6407477), (6407774, 6436724), (6437934, 6438179), (6438763, 6438831), (6439007, 6439586), (6443225, 6443438), (6443651, 6443821), (6444310, 6446459), (6444310, 6445534), (6446072, 6446459)] 2021-10-25 09:36:17.373 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6406856, 6407774, 'FBtr0303788_exon_1') contains intron (6407091, 6407477) 2021-10-25 09:36:17.374 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6406854, 6407774, 'FBtr0334322_exon_1') contains intron (6407091, 6407477) 2021-10-25 09:36:17.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0303788_exon_1', 'FBtr0334322_exon_1'] 2021-10-25 09:36:17.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035134: ['FBtr0072546'] 2021-10-25 09:36:17.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035134 has a single transcript. 2021-10-25 09:36:17.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035137: ['FBtr0072548', 'FBtr0072549'] 2021-10-25 09:36:17.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011642: ['FBtr0089210', 'FBtr0089211', 'FBtr0089214', 'FBtr0309882', 'FBtr0345298'] 2021-10-25 09:36:17.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(361699, 361752), (362341, 362426), (364903, 364964)] 2021-10-25 09:36:17.526 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (361471, 362341, 'FBtr0072549_exon_1') contains intron (361699, 361752) 2021-10-25 09:36:17.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072549_exon_1'] 2021-10-25 09:36:17.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035138: ['FBtr0072568'] 2021-10-25 09:36:17.605 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035138 has a single transcript. 2021-10-25 09:36:17.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035139: ['FBtr0072566'] 2021-10-25 09:36:17.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035139 has a single transcript. 2021-10-25 09:36:17.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264496: ['FBtr0332854'] 2021-10-25 09:36:17.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264496 has a single transcript. 2021-10-25 09:36:17.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035140: ['FBtr0072550', 'FBtr0331785'] 2021-10-25 09:36:17.630 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264500: ['FBtr0332903'] 2021-10-25 09:36:17.630 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264500 has a single transcript. 2021-10-25 09:36:17.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264501: ['FBtr0332931'] 2021-10-25 09:36:17.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264501 has a single transcript. 2021-10-25 09:36:17.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264502: ['FBtr0344828', 'FBtr0332932', 'FBtr0332933'] 2021-10-25 09:36:17.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1057572, 1057632), (1057753, 1057806), (1058155, 1058209), (1058504, 1059100), (1059288, 1059418), (1059351, 1059418), (1059836, 1064244), (1059836, 1060412), (1059836, 1060772), (1060634, 1064244), (1060634, 1060740), (1060653, 1060740), (1064381, 1064822)] 2021-10-25 09:36:17.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(540940, 541001), (541428, 541484), (541959, 542016)] 2021-10-25 09:36:17.682 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (540937, 541428, 'FBtr0331785_exon_1') contains intron (540940, 541001) 2021-10-25 09:36:17.682 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331785_exon_1'] 2021-10-25 09:36:17.682 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.721 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10909122, 10912505), (10912935, 10914719), (10914896, 10915598), (10914896, 10915793), (10916143, 10916209), (10916143, 10916212), (10916616, 10916676), (10917046, 10917101), (10918517, 10919834)] 2021-10-25 09:36:17.723 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.723 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0035141: ['FBtr0072564'] 2021-10-25 09:36:17.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0035141 has a single transcript. 2021-10-25 09:36:17.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031224: ['FBtr0078116'] 2021-10-25 09:36:17.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031224 has a single transcript. 2021-10-25 09:36:17.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031227: ['FBtr0078147'] 2021-10-25 09:36:17.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031227 has a single transcript. 2021-10-25 09:36:17.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031228: ['FBtr0078117', 'FBtr0078118', 'FBtr0301886', 'FBtr0301887', 'FBtr0306542', 'FBtr0330638', 'FBtr0330639', 'FBtr0330640', 'FBtr0330641', 'FBtr0330642'] 2021-10-25 09:36:17.825 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264503: ['FBtr0332934'] 2021-10-25 09:36:17.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264503 has a single transcript. 2021-10-25 09:36:17.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264504: ['FBtr0332937'] 2021-10-25 09:36:17.833 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264504 has a single transcript. 2021-10-25 09:36:17.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264505: ['FBtr0344875'] 2021-10-25 09:36:17.841 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264505 has a single transcript. 2021-10-25 09:36:17.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264506: ['FBtr0332951'] 2021-10-25 09:36:17.848 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264506 has a single transcript. 2021-10-25 09:36:17.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264507: ['FBtr0332991'] 2021-10-25 09:36:17.855 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264507 has a single transcript. 2021-10-25 09:36:17.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264508: ['FBtr0333069'] 2021-10-25 09:36:17.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264508 has a single transcript. 2021-10-25 09:36:17.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264509: ['FBtr0333014'] 2021-10-25 09:36:17.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264509 has a single transcript. 2021-10-25 09:36:17.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264510: ['FBtr0333104'] 2021-10-25 09:36:17.876 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264510 has a single transcript. 2021-10-25 09:36:17.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264511: ['FBtr0333110'] 2021-10-25 09:36:17.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264511 has a single transcript. 2021-10-25 09:36:17.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264512: ['FBtr0333128'] 2021-10-25 09:36:17.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264512 has a single transcript. 2021-10-25 09:36:17.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264513: ['FBtr0346597', 'FBtr0347495', 'FBtr0333130'] 2021-10-25 09:36:17.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011648: ['FBtr0077616', 'FBtr0332372'] 2021-10-25 09:36:17.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3147825, 3148046), (3148737, 3148803), (3149279, 3152428), (3149279, 3159493)] 2021-10-25 09:36:17.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:17.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13291586, 13291641)] 2021-10-25 09:36:17.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:17.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.035 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011653: ['FBtr0073260', 'FBtr0332659'] 2021-10-25 09:36:18.090 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4162317, 4162376), (4162654, 4162712), (4163613, 4163669), (4164584, 4164643), (4164796, 4164884), (4164799, 4164884), (4165181, 4165242), (4165392, 4165464), (4165637, 4167329)] 2021-10-25 09:36:18.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.095 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(114991, 155637), (114991, 155566), (114991, 155545), (155178, 155249), (155410, 155465), (155429, 155545), (155429, 155637), (155429, 155566), (155784, 155857)] 2021-10-25 09:36:18.097 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (155334, 155784, 'FBtr0078118_exon_1') contains intron (155410, 155465) 2021-10-25 09:36:18.098 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (155088, 155784, 'FBtr0330641_exon_1') contains intron (155178, 155249) 2021-10-25 09:36:18.099 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (155249, 155784, 'FBtr0330642_exon_2') contains intron (155410, 155465) 2021-10-25 09:36:18.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078118_exon_1', 'FBtr0330641_exon_1', 'FBtr0330642_exon_2'] 2021-10-25 09:36:18.099 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264514: ['FBtr0333131', 'FBtr0333132'] 2021-10-25 09:36:18.168 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13283962, 13284048), (13283962, 13284295)] 2021-10-25 09:36:18.169 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.169 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011655: ['FBtr0085816', 'FBtr0085815', 'FBtr0337030'] 2021-10-25 09:36:18.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264515: ['FBtr0344583'] 2021-10-25 09:36:18.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264515 has a single transcript. 2021-10-25 09:36:18.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264516: ['FBtr0333135'] 2021-10-25 09:36:18.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264516 has a single transcript. 2021-10-25 09:36:18.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31611744, 31611978), (31612247, 31612333), (31612688, 31612886), (31612688, 31613259), (31613108, 31613259), (31613874, 31613934), (31614217, 31614278), (31614447, 31614503), (31614630, 31614689)] 2021-10-25 09:36:18.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264517: ['FBtr0333133'] 2021-10-25 09:36:18.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264517 has a single transcript. 2021-10-25 09:36:18.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264518: ['FBtr0333143'] 2021-10-25 09:36:18.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264518 has a single transcript. 2021-10-25 09:36:18.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264539: ['FBtr0333150'] 2021-10-25 09:36:18.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264539 has a single transcript. 2021-10-25 09:36:18.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264540: ['FBtr0333167'] 2021-10-25 09:36:18.274 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264540 has a single transcript. 2021-10-25 09:36:18.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264541: ['FBtr0344699', 'FBtr0344700'] 2021-10-25 09:36:18.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:18.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.396 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011656: ['FBtr0088446', 'FBtr0088447', 'FBtr0088443', 'FBtr0088444', 'FBtr0088445', 'FBtr0330707', 'FBtr0330708'] 2021-10-25 09:36:18.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264542: ['FBtr0333154', 'FBtr0333155', 'FBtr0333156', 'FBtr0346131'] 2021-10-25 09:36:18.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12519165, 12519227), (12519347, 12519402), (12519586, 12519655), (12521822, 12521908), (12522726, 12523517), (12524226, 12529487), (12529622, 12546661), (12529622, 12531020), (12529622, 12563081), (12563241, 12564301), (12564691, 12565014), (12566836, 12568288)] 2021-10-25 09:36:18.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031229: ['FBtr0078119', 'FBtr0340650'] 2021-10-25 09:36:18.601 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9916891, 9917456), (9916891, 9917937), (9916912, 9917456), (9916912, 9917937), (9917531, 9917937), (9918353, 9918468), (9918632, 9918711), (9918641, 9918711), (9918848, 9918963), (9918848, 9919428), (9918848, 9919446), (9919062, 9919428), (9919062, 9919446), (9919747, 9920518), (9920722, 9921609), (9922003, 9940744), (9922003, 9934318), (9922003, 9926486), (9922003, 9928899), (9926869, 9928899), (9934377, 9958123), (9934377, 9940744), (9940953, 9942912), (9940953, 9958123)] 2021-10-25 09:36:18.604 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.605 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.625 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(156348, 156422), (156552, 156735)] 2021-10-25 09:36:18.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031231: ['FBtr0078124'] 2021-10-25 09:36:18.701 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031231 has a single transcript. 2021-10-25 09:36:18.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031232: ['FBtr0078146', 'FBtr0308246'] 2021-10-25 09:36:18.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264543: ['FBtr0333243'] 2021-10-25 09:36:18.716 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264543 has a single transcript. 2021-10-25 09:36:18.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264544: ['FBtr0333240'] 2021-10-25 09:36:18.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264544 has a single transcript. 2021-10-25 09:36:18.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264545: ['FBtr0333239'] 2021-10-25 09:36:18.732 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264545 has a single transcript. 2021-10-25 09:36:18.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264546: ['FBtr0333234'] 2021-10-25 09:36:18.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264546 has a single transcript. 2021-10-25 09:36:18.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264547: ['FBtr0333246'] 2021-10-25 09:36:18.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264547 has a single transcript. 2021-10-25 09:36:18.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264548: ['FBtr0344027', 'FBtr0333244'] 2021-10-25 09:36:18.770 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(205212, 205271), (205943, 206000), (206050, 206699), (206050, 207230)] 2021-10-25 09:36:18.772 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.772 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22751519, 22751679)] 2021-10-25 09:36:18.808 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22751303, 22751795, 'FBtr0344027_exon_1') contains intron (22751519, 22751679) 2021-10-25 09:36:18.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344027_exon_1'] 2021-10-25 09:36:18.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031233: ['FBtr0078125', 'FBtr0332338', 'FBtr0332339'] 2021-10-25 09:36:18.874 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264549: ['FBtr0345782', 'FBtr0333249'] 2021-10-25 09:36:18.918 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011659: ['FBtr0088790', 'FBtr0331379'] 2021-10-25 09:36:18.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3477011, 3477076)] 2021-10-25 09:36:18.929 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(207631, 207710), (208608, 208728)] 2021-10-25 09:36:18.931 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.932 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:18.971 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8171109, 8171166), (8171113, 8171173)] 2021-10-25 09:36:18.972 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:18.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.004 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264550: ['FBtr0333281'] 2021-10-25 09:36:19.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264550 has a single transcript. 2021-10-25 09:36:19.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264551: ['FBtr0333282'] 2021-10-25 09:36:19.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264551 has a single transcript. 2021-10-25 09:36:19.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264552: ['FBtr0333280'] 2021-10-25 09:36:19.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264552 has a single transcript. 2021-10-25 09:36:19.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264553: ['FBtr0333283'] 2021-10-25 09:36:19.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264553 has a single transcript. 2021-10-25 09:36:19.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264554: ['FBtr0344642', 'FBtr0344984'] 2021-10-25 09:36:19.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031235: ['FBtr0078126'] 2021-10-25 09:36:19.043 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031235 has a single transcript. 2021-10-25 09:36:19.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011660: ['FBtr0087388'] 2021-10-25 09:36:19.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011660 has a single transcript. 2021-10-25 09:36:19.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031238: ['FBtr0078140', 'FBtr0078141', 'FBtr0336989'] 2021-10-25 09:36:19.069 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011661: ['FBtr0071271', 'FBtr0071272', 'FBtr0071273', 'FBtr0071274', 'FBtr0071275', 'FBtr0071276', 'FBtr0071277', 'FBtr0071278', 'FBtr0071269', 'FBtr0071270', 'FBtr0331601', 'FBtr0308193', 'FBtr0308194'] 2021-10-25 09:36:19.091 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21497021, 21498230), (21497594, 21498230)] 2021-10-25 09:36:19.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(253145, 253219), (253385, 253445), (253890, 253955), (254397, 254561), (254397, 271628), (254424, 271628)] 2021-10-25 09:36:19.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264556: ['FBtr0081510', 'FBtr0081511', 'FBtr0081509', 'FBtr0081508'] 2021-10-25 09:36:19.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031239: ['FBtr0078142', 'FBtr0308252'] 2021-10-25 09:36:19.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21291612, 21297284), (21292879, 21297284), (21295458, 21297284), (21297189, 21297284), (21297347, 21297455), (21297545, 21297599)] 2021-10-25 09:36:19.291 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.291 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.317 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:19.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031240: ['FBtr0078127'] 2021-10-25 09:36:19.396 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031240 has a single transcript. 2021-10-25 09:36:19.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031244: ['FBtr0078137', 'FBtr0343779', 'FBtr0343780'] 2021-10-25 09:36:19.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8874111, 8874188), (8874401, 8874502), (8874401, 8874511), (8874899, 8875093), (8875860, 8876032), (8875860, 8876572), (8876059, 8876305), (8876059, 8876572), (8876437, 8876572), (8876752, 8878468), (8876752, 8880291), (8876752, 8877013), (8880400, 8897910), (8880400, 8891561), (8880400, 8898183), (8880400, 8894058), (8880400, 8897838), (8880400, 8881259), (8891623, 8898183), (8891623, 8891733)] 2021-10-25 09:36:19.442 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8891561, 8891807, 'FBtr0071278_exon_1') contains intron (8891623, 8891733) 2021-10-25 09:36:19.442 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8891561, 8891807, 'FBtr0071269_exon_1') contains intron (8891623, 8891733) 2021-10-25 09:36:19.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071278_exon_1', 'FBtr0071269_exon_1'] 2021-10-25 09:36:19.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.477 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264560: ['FBtr0087898', 'FBtr0305075', 'FBtr0087897'] 2021-10-25 09:36:19.496 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(282505, 282653)] 2021-10-25 09:36:19.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.497 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.563 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12326775, 12326838), (12327037, 12327092), (12328078, 12328139), (12329120, 12329190), (12329399, 12329463), (12329690, 12329749), (12330980, 12331037), (12332098, 12332472), (12332098, 12332146), (12332098, 12332149), (12332726, 12332794)] 2021-10-25 09:36:19.565 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.565 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031245: ['FBtr0078135', 'FBtr0078136', 'FBtr0113009', 'FBtr0343778'] 2021-10-25 09:36:19.685 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264561: ['FBtr0332717', 'FBtr0078388'] 2021-10-25 09:36:19.737 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21498492, 21500557), (21500927, 21503990), (21504359, 21504541), (21504359, 21504553), (21504939, 21505015), (21506225, 21506427)] 2021-10-25 09:36:19.738 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(284210, 284747), (284968, 285432), (284968, 286306), (284968, 290812), (291031, 291606), (291031, 291660)] 2021-10-25 09:36:19.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.739 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.739 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:19.740 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:19.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264562: ['FBtr0333337', 'FBtr0333338', 'FBtr0333339', 'FBtr0333340', 'FBtr0333341', 'FBtr0333342', 'FBtr0333343', 'FBtr0333344', 'FBtr0333345'] 2021-10-25 09:36:19.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031247: ['FBtr0078130'] 2021-10-25 09:36:19.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031247 has a single transcript. 2021-10-25 09:36:19.930 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031248: ['FBtr0078099'] 2021-10-25 09:36:19.930 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031248 has a single transcript. 2021-10-25 09:36:19.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031249: ['FBtr0078098'] 2021-10-25 09:36:19.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031249 has a single transcript. 2021-10-25 09:36:19.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031250: ['FBtr0078094', 'FBtr0078095', 'FBtr0330651'] 2021-10-25 09:36:20.021 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(356312, 356366), (356837, 356890), (357191, 357422), (357748, 357815), (357766, 357815)] 2021-10-25 09:36:20.022 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (357422, 357874, 'FBtr0078094_exon_1') contains intron (357748, 357815) 2021-10-25 09:36:20.023 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078094_exon_1'] 2021-10-25 09:36:20.024 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.083 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1942004, 1942426), (1942893, 1953280), (1953466, 1967895), (1967989, 1976571), (1976620, 1986397), (1986455, 1993014), (1986455, 1992538), (1986455, 1997581), (1986455, 1993209), (1986455, 1989757), (1989947, 1997581), (1992735, 1994401), (1994189, 1997581), (1994898, 1997581), (2000405, 2000553), (2000702, 2000770), (2002159, 2002234), (2002159, 2002231), (2002353, 2002459), (2003552, 2003620)] 2021-10-25 09:36:20.085 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333337_exon_12') contains intron (2003552, 2003620) 2021-10-25 09:36:20.085 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333338_exon_7') contains intron (2003552, 2003620) 2021-10-25 09:36:20.086 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333339_exon_6') contains intron (2003552, 2003620) 2021-10-25 09:36:20.086 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333340_exon_12') contains intron (2003552, 2003620) 2021-10-25 09:36:20.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333341_exon_11') contains intron (2003552, 2003620) 2021-10-25 09:36:20.088 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333342_exon_11') contains intron (2003552, 2003620) 2021-10-25 09:36:20.089 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1941939, 1942893, 'FBtr0333344_exon_1') contains intron (1942004, 1942426) 2021-10-25 09:36:20.089 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2005462, 'FBtr0333344_exon_11') contains intron (2003552, 2003620) 2021-10-25 09:36:20.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2002459, 2007956, 'FBtr0333345_exon_12') contains intron (2003552, 2003620) 2021-10-25 09:36:20.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333337_exon_12', 'FBtr0333338_exon_7', 'FBtr0333339_exon_6', 'FBtr0333340_exon_12', 'FBtr0333341_exon_11', 'FBtr0333342_exon_11', 'FBtr0333344_exon_1', 'FBtr0333344_exon_11', 'FBtr0333345_exon_12'] 2021-10-25 09:36:20.090 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011666: ['FBtr0084881', 'FBtr0084882', 'FBtr0305218', 'FBtr0305219', 'FBtr0333663', 'FBtr0333664', 'FBtr0333665'] 2021-10-25 09:36:20.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031251: ['FBtr0078093', 'FBtr0331204'] 2021-10-25 09:36:20.209 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(398866, 399847), (400456, 400522), (400667, 400724), (400942, 401006)] 2021-10-25 09:36:20.211 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:20.211 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031252: ['FBtr0078090'] 2021-10-25 09:36:20.285 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031252 has a single transcript. 2021-10-25 09:36:20.295 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031253: ['FBtr0078089'] 2021-10-25 09:36:20.295 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031253 has a single transcript. 2021-10-25 09:36:20.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031254: ['FBtr0078057'] 2021-10-25 09:36:20.302 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031254 has a single transcript. 2021-10-25 09:36:20.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25516349, 25519260), (25518472, 25519260), (25519729, 25574883), (25519729, 25564079), (25519729, 25595073), (25564127, 25574883), (25574922, 25595073), (25576297, 25584218), (25584774, 25595073), (25595602, 25599506), (25600210, 25600269)] 2021-10-25 09:36:20.308 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:20.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031255: ['FBtr0078058'] 2021-10-25 09:36:20.309 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031255 has a single transcript. 2021-10-25 09:36:20.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031256: ['FBtr0078060'] 2021-10-25 09:36:20.315 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031256 has a single transcript. 2021-10-25 09:36:20.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031257: ['FBtr0078061', 'FBtr0331230', 'FBtr0331231'] 2021-10-25 09:36:20.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(455827, 456085), (456223, 456288), (456468, 456538), (456729, 456796), (456897, 456972), (457338, 457399), (457562, 457627), (457562, 457614)] 2021-10-25 09:36:20.404 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (456796, 457338, 'FBtr0078061_exon_5') contains intron (456897, 456972) 2021-10-25 09:36:20.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (456796, 457338, 'FBtr0331231_exon_5') contains intron (456897, 456972) 2021-10-25 09:36:20.405 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078061_exon_5', 'FBtr0331231_exon_5'] 2021-10-25 09:36:20.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031258: ['FBtr0310034', 'FBtr0310035'] 2021-10-25 09:36:20.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264563: ['FBtr0333426'] 2021-10-25 09:36:20.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264563 has a single transcript. 2021-10-25 09:36:20.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264564: ['FBtr0344128', 'FBtr0344129'] 2021-10-25 09:36:20.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(464941, 471397)] 2021-10-25 09:36:20.594 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:20.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11840839, 11840893)] 2021-10-25 09:36:20.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:20.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011668: ['FBtr0084914'] 2021-10-25 09:36:20.664 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011668 has a single transcript. 2021-10-25 09:36:20.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031260: ['FBtr0078080'] 2021-10-25 09:36:20.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031260 has a single transcript. 2021-10-25 09:36:20.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011669: ['FBtr0084915'] 2021-10-25 09:36:20.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011669 has a single transcript. 2021-10-25 09:36:20.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264565: ['FBtr0333424'] 2021-10-25 09:36:20.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264565 has a single transcript. 2021-10-25 09:36:20.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011670: ['FBtr0339163'] 2021-10-25 09:36:20.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011670 has a single transcript. 2021-10-25 09:36:20.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031261: ['FBtr0078064'] 2021-10-25 09:36:20.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031261 has a single transcript. 2021-10-25 09:36:20.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264566: ['FBtr0333448'] 2021-10-25 09:36:20.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264566 has a single transcript. 2021-10-25 09:36:20.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031263: ['FBtr0078066'] 2021-10-25 09:36:20.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031263 has a single transcript. 2021-10-25 09:36:20.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264567: ['FBtr0333457'] 2021-10-25 09:36:20.695 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264567 has a single transcript. 2021-10-25 09:36:20.695 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011672: ['FBtr0089521', 'FBtr0301477', 'FBtr0301478', 'FBtr0330046', 'FBtr0306350', 'FBtr0306351'] 2021-10-25 09:36:20.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031264: ['FBtr0078076', 'FBtr0332341', 'FBtr0332342', 'FBtr0345577'] 2021-10-25 09:36:20.701 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264568: ['FBtr0333469'] 2021-10-25 09:36:20.702 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264568 has a single transcript. 2021-10-25 09:36:20.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264569: ['FBtr0333471'] 2021-10-25 09:36:20.709 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264569 has a single transcript. 2021-10-25 09:36:20.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264570: ['FBtr0333470'] 2021-10-25 09:36:20.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264570 has a single transcript. 2021-10-25 09:36:20.722 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264571: ['FBtr0333480'] 2021-10-25 09:36:20.722 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264571 has a single transcript. 2021-10-25 09:36:20.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264572: ['FBtr0333481'] 2021-10-25 09:36:20.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264572 has a single transcript. 2021-10-25 09:36:20.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264573: ['FBtr0333483'] 2021-10-25 09:36:20.736 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264573 has a single transcript. 2021-10-25 09:36:20.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264574: ['FBtr0347552', 'FBtr0333493', 'FBtr0333494', 'FBtr0333495', 'FBtr0333496', 'FBtr0333497', 'FBtr0333498', 'FBtr0333499', 'FBtr0333500', 'FBtr0333501', 'FBtr0333502', 'FBtr0333503', 'FBtr0333504', 'FBtr0333505', 'FBtr0333506', 'FBtr0333507', 'FBtr0333508', 'FBtr0333509', 'FBtr0345689', 'FBtr0345690'] 2021-10-25 09:36:20.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(563189, 563276), (563189, 563253), (563189, 563258)] 2021-10-25 09:36:20.801 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (560567, 563347, 'FBtr0332342_exon_1') contains intron (563189, 563276) 2021-10-25 09:36:20.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332342_exon_1'] 2021-10-25 09:36:20.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.851 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21052242, 21055344), (21053618, 21055344), (21055041, 21055344), (21055415, 21055631), (21055723, 21055786), (21055902, 21055963), (21056409, 21056467), (21056626, 21056694), (21056850, 21057575), (21057714, 21057786), (21057951, 21058015), (21058200, 21058260), (21058468, 21060584), (21058468, 21060744), (21058468, 21060281)] 2021-10-25 09:36:20.852 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21058260, 21060653, 'FBtr0301477_exon_1') contains intron (21058468, 21060584) 2021-10-25 09:36:20.854 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301477_exon_1'] 2021-10-25 09:36:20.854 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:20.882 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0089521': ['FBtr0330046']} 2021-10-25 09:36:20.882 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330046']] 2021-10-25 09:36:20.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031265: ['FBtr0078067'] 2021-10-25 09:36:20.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031265 has a single transcript. 2021-10-25 09:36:20.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031266: ['FBtr0078068', 'FBtr0332340'] 2021-10-25 09:36:21.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(568433, 568598), (569290, 569347)] 2021-10-25 09:36:21.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.047 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011674: ['FBtr0071562'] 2021-10-25 09:36:21.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011674 has a single transcript. 2021-10-25 09:36:21.119 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031267: ['FBtr0078074'] 2021-10-25 09:36:21.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031267 has a single transcript. 2021-10-25 09:36:21.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031268: ['FBtr0078069', 'FBtr0310022'] 2021-10-25 09:36:21.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011676: ['FBtr0100489', 'FBtr0080188', 'FBtr0343888'] 2021-10-25 09:36:21.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(574355, 574633), (574698, 574779), (575090, 575143)] 2021-10-25 09:36:21.186 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.186 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.220 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10804626, 10804829), (10804896, 10805618), (10805743, 10805984), (10807127, 10807290), (10807624, 10812286), (10812354, 10812463), (10812568, 10813300), (10813445, 10816023), (10816233, 10816962), (10817144, 10818391), (10818566, 10822106), (10822246, 10822967), (10823109, 10823760), (10823852, 10825673), (10825836, 10825948), (10826085, 10826539), (10826085, 10830599), (10830714, 10831328), (10832096, 10837279)] 2021-10-25 09:36:21.221 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10812286, 10812568, 'FBtr0100489_exon_13') contains intron (10812354, 10812463) 2021-10-25 09:36:21.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100489_exon_13'] 2021-10-25 09:36:21.223 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031270: ['FBtr0078071', 'FBtr0310023'] 2021-10-25 09:36:21.318 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(602949, 603073), (603006, 603073)] 2021-10-25 09:36:21.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.438 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011692: ['FBtr0073227'] 2021-10-25 09:36:21.438 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011692 has a single transcript. 2021-10-25 09:36:21.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011693: ['FBtr0075426', 'FBtr0075427', 'FBtr0114536', 'FBtr0114537'] 2021-10-25 09:36:21.449 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(914218, 950946), (914218, 915638), (914609, 915638), (915809, 950946), (951133, 967247), (959842, 967247), (959970, 967247), (967537, 972243), (967537, 980950), (967537, 980053), (967537, 979771), (972402, 973822), (973942, 974137), (974300, 979771), (974300, 974719), (975062, 979771), (979937, 980053), (980191, 980276), (980191, 980950), (980221, 980950), (980429, 980950), (981207, 981295), (981420, 981486), (981765, 981825), (982103, 982174), (982297, 983833), (982297, 983854), (984058, 984136), (984276, 985361), (984276, 985940), (984276, 985725), (986044, 987172), (986044, 988595), (987434, 987745), (987439, 991092), (987825, 988595)] 2021-10-25 09:36:21.453 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031273: ['FBtr0077999'] 2021-10-25 09:36:21.453 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031273 has a single transcript. 2021-10-25 09:36:21.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.460 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031275: ['FBtr0078001', 'FBtr0301439', 'FBtr0346526', 'FBtr0308257', 'FBtr0343785', 'FBtr0343786', 'FBtr0343787'] 2021-10-25 09:36:21.517 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0333495': ['FBtr0333502']} 2021-10-25 09:36:21.517 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0333502']] 2021-10-25 09:36:21.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16353615, 16353679), (16354078, 16354137), (16354081, 16354137)] 2021-10-25 09:36:21.559 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(750400, 752730), (750803, 752730), (753730, 754486), (754630, 755020), (755296, 755828), (755296, 755661), (756080, 756333), (756080, 756667), (757030, 757127), (757429, 757799), (757938, 758846), (759122, 759230), (759549, 759678)] 2021-10-25 09:36:21.671 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.671 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011694: ['FBtr0072455', 'FBtr0345580'] 2021-10-25 09:36:21.785 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25174112, 25174167)] 2021-10-25 09:36:21.787 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.787 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:21.869 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011695: ['FBtr0072164', 'FBtr0343340', 'FBtr0343341'] 2021-10-25 09:36:21.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24026301, 24026375), (24026498, 24027003), (24026616, 24027003)] 2021-10-25 09:36:21.943 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:21.944 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031276: ['FBtr0078003'] 2021-10-25 09:36:22.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031276 has a single transcript. 2021-10-25 09:36:22.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031277: ['FBtr0078005'] 2021-10-25 09:36:22.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031277 has a single transcript. 2021-10-25 09:36:22.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031279: ['FBtr0078007', 'FBtr0331652'] 2021-10-25 09:36:22.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011701: ['FBtr0083564'] 2021-10-25 09:36:22.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011701 has a single transcript. 2021-10-25 09:36:22.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(786427, 786509)] 2021-10-25 09:36:22.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011703: ['FBtr0080059'] 2021-10-25 09:36:22.077 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011703 has a single transcript. 2021-10-25 09:36:22.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011704: ['FBtr0088046'] 2021-10-25 09:36:22.085 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011704 has a single transcript. 2021-10-25 09:36:22.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011705: ['FBtr0079782', 'FBtr0331453', 'FBtr0331454'] 2021-10-25 09:36:22.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031281: ['FBtr0078041', 'FBtr0332974'] 2021-10-25 09:36:22.174 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8986530, 8986599), (8986783, 8986935), (8987287, 8988935), (8989229, 8989351)] 2021-10-25 09:36:22.175 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.176 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(813893, 813950), (814184, 814242), (815221, 815274), (815412, 815474), (815421, 815474)] 2021-10-25 09:36:22.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031282: ['FBtr0078010', 'FBtr0332972'] 2021-10-25 09:36:22.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011706: ['FBtr0075120'] 2021-10-25 09:36:22.304 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011706 has a single transcript. 2021-10-25 09:36:22.315 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011708: ['FBtr0080831', 'FBtr0080832'] 2021-10-25 09:36:22.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:22.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.322 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.366 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16307389, 16307482), (16308329, 16308397)] 2021-10-25 09:36:22.367 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16307345, 16308329, 'FBtr0080832_exon_1') contains intron (16307389, 16307482) 2021-10-25 09:36:22.368 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080832_exon_1'] 2021-10-25 09:36:22.368 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031283: ['FBtr0078040'] 2021-10-25 09:36:22.390 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031283 has a single transcript. 2021-10-25 09:36:22.399 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031284: ['FBtr0078039'] 2021-10-25 09:36:22.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031284 has a single transcript. 2021-10-25 09:36:22.407 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031285: ['FBtr0078012', 'FBtr0100469', 'FBtr0301908', 'FBtr0305507'] 2021-10-25 09:36:22.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011710: ['FBtr0077198'] 2021-10-25 09:36:22.442 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011710 has a single transcript. 2021-10-25 09:36:22.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011715: ['FBtr0078682'] 2021-10-25 09:36:22.452 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011715 has a single transcript. 2021-10-25 09:36:22.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011722: ['FBtr0079275', 'FBtr0343152'] 2021-10-25 09:36:22.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264598: ['FBtr0333526', 'FBtr0333527', 'FBtr0333528', 'FBtr0333529', 'FBtr0333530', 'FBtr0333531', 'FBtr0333532', 'FBtr0333533'] 2021-10-25 09:36:22.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6415498, 6415556), (6417584, 6417657), (6418617, 6418685), (6421951, 6422259), (6422520, 6423127)] 2021-10-25 09:36:22.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(821659, 822857), (823569, 823636), (824137, 824218), (824137, 824190)] 2021-10-25 09:36:22.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.513 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (823636, 824337, 'FBtr0078012_exon_3') contains intron (824137, 824218) 2021-10-25 09:36:22.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (821421, 823569, 'FBtr0100469_exon_1') contains intron (821659, 822857) 2021-10-25 09:36:22.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (823636, 824337, 'FBtr0100469_exon_2') contains intron (824137, 824218) 2021-10-25 09:36:22.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078012_exon_3', 'FBtr0100469_exon_1', 'FBtr0100469_exon_2'] 2021-10-25 09:36:22.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011723: ['FBtr0332070', 'FBtr0332071'] 2021-10-25 09:36:22.644 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11928023, 11932000), (11932346, 11933273), (11933394, 11933527), (11933671, 11933739), (11934538, 11934964), (11935349, 11935427), (11935349, 11935395)] 2021-10-25 09:36:22.645 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.645 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031286: ['FBtr0078038'] 2021-10-25 09:36:22.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031286 has a single transcript. 2021-10-25 09:36:22.707 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2368644, 2368703), (2368905, 2368968), (2369676, 2369743), (2370228, 2370335), (2370998, 2372590), (2370998, 2371814), (2371281, 2371814), (2371896, 2372590), (2371896, 2372323), (2372332, 2372590), (2372706, 2372766), (2374106, 2374704), (2374524, 2374704), (2375250, 2379041), (2379216, 2379277), (2379455, 2379513), (2380393, 2380758), (2381944, 2383495), (2381944, 2384238), (2383603, 2384238), (2384515, 2384852), (2385733, 2387412)] 2021-10-25 09:36:22.711 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2371996, 2372706, 'FBtr0333533_exon_10') contains intron (2372332, 2372590) 2021-10-25 09:36:22.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333533_exon_10'] 2021-10-25 09:36:22.712 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.714 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031287: ['FBtr0078034', 'FBtr0334797'] 2021-10-25 09:36:22.724 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011725: ['FBtr0084566', 'FBtr0084567', 'FBtr0084568', 'FBtr0084569', 'FBtr0084570', 'FBtr0084571'] 2021-10-25 09:36:22.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(851659, 851717), (852442, 852498), (852571, 852627)] 2021-10-25 09:36:22.781 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.781 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031288: ['FBtr0078017', 'FBtr0334795', 'FBtr0334796'] 2021-10-25 09:36:22.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24199213, 24199274), (24199587, 24199882), (24199951, 24219599), (24199951, 24200541), (24219775, 24219964), (24220151, 24220214), (24220343, 24220531), (24220343, 24221114), (24220563, 24220827), (24220563, 24221804), (24220563, 24221114), (24220563, 24221792)] 2021-10-25 09:36:22.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.881 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:22.948 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(855623, 855686), (855810, 855867)] 2021-10-25 09:36:22.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:22.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031289: ['FBtr0078018', 'FBtr0445832'] 2021-10-25 09:36:23.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264599: ['FBtr0333552'] 2021-10-25 09:36:23.107 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264599 has a single transcript. 2021-10-25 09:36:23.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264600: ['FBtr0344584'] 2021-10-25 09:36:23.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264600 has a single transcript. 2021-10-25 09:36:23.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264601: ['FBtr0344585'] 2021-10-25 09:36:23.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264601 has a single transcript. 2021-10-25 09:36:23.130 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264602: ['FBtr0333615'] 2021-10-25 09:36:23.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264602 has a single transcript. 2021-10-25 09:36:23.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(860409, 860763), (861357, 861428)] 2021-10-25 09:36:23.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.137 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264603: ['FBtr0344586'] 2021-10-25 09:36:23.137 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264603 has a single transcript. 2021-10-25 09:36:23.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264604: ['FBtr0333623'] 2021-10-25 09:36:23.144 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264604 has a single transcript. 2021-10-25 09:36:23.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264605: ['FBtr0333628'] 2021-10-25 09:36:23.151 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264605 has a single transcript. 2021-10-25 09:36:23.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011726: ['FBtr0072188'] 2021-10-25 09:36:23.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011726 has a single transcript. 2021-10-25 09:36:23.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011737: ['FBtr0079371', 'FBtr0332329'] 2021-10-25 09:36:23.162 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264606: ['FBtr0333629', 'FBtr0333630', 'FBtr0333631', 'FBtr0333632'] 2021-10-25 09:36:23.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6911852, 6911948), (6912082, 6912183), (6912888, 6912944), (6913281, 6913425)] 2021-10-25 09:36:23.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031292: ['FBtr0332181', 'FBtr0345634'] 2021-10-25 09:36:23.273 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2657672, 2658213), (2658375, 2658476), (2659222, 2665910), (2659222, 2664917), (2665381, 2665910), (2666647, 2666876), (2667058, 2672828), (2672893, 2673064), (2673284, 2673585), (2673710, 2678537), (2678779, 2678897), (2679152, 2679212), (2679469, 2679618), (2679867, 2682220), (2682561, 2684552), (2684688, 2689488), (2689932, 2697695), (2689938, 2697695), (2697926, 2711351)] 2021-10-25 09:36:23.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.276 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(878334, 878391), (878773, 878837), (879799, 879864), (880914, 880973), (881585, 881647), (881947, 882047), (882604, 882659), (883039, 883095), (883297, 883364), (883991, 884051), (884185, 884255), (884388, 884441), (884652, 884721), (884846, 884907)] 2021-10-25 09:36:23.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.296 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011739: ['FBtr0085720'] 2021-10-25 09:36:23.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011739 has a single transcript. 2021-10-25 09:36:23.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011740: ['FBtr0082031', 'FBtr0334302'] 2021-10-25 09:36:23.353 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031294: ['FBtr0332270', 'FBtr0301416', 'FBtr0301417'] 2021-10-25 09:36:23.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9412807, 9412860), (9412807, 9412863), (9413390, 9413722), (9415195, 9415429), (9416492, 9416588)] 2021-10-25 09:36:23.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.436 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1014484, 1014549), (1014716, 1014776), (1014974, 1015034), (1015256, 1015314), (1015927, 1015992), (1016076, 1016138), (1017641, 1017710), (1017768, 1019267), (1019321, 1033686), (1034190, 1034401), (1034190, 1042963), (1034190, 1046809), (1047022, 1047955)] 2021-10-25 09:36:23.438 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.438 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011741: ['FBtr0074203'] 2021-10-25 09:36:23.445 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011741 has a single transcript. 2021-10-25 09:36:23.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011742: ['FBtr0074295', 'FBtr0112868', 'FBtr0310673'] 2021-10-25 09:36:23.485 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264607: ['FBtr0100146', 'FBtr0100147', 'FBtr0100148', 'FBtr0089218', 'FBtr0089217', 'FBtr0300379', 'FBtr0300378', 'FBtr0089219', 'FBtr0300377', 'FBtr0333673', 'FBtr0333674', 'FBtr0333675'] 2021-10-25 09:36:23.551 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16549412, 16549477), (16549906, 16549976), (16550186, 16550249), (16550465, 16552339), (16550465, 16551474), (16551489, 16552339), (16552450, 16553343), (16553558, 16553780)] 2021-10-25 09:36:23.553 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16553343, 16553968, 'FBtr0074295_exon_1') contains intron (16553558, 16553780) 2021-10-25 09:36:23.555 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16553343, 16553951, 'FBtr0310673_exon_1') contains intron (16553558, 16553780) 2021-10-25 09:36:23.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074295_exon_1', 'FBtr0310673_exon_1'] 2021-10-25 09:36:23.555 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031295: ['FBtr0077997'] 2021-10-25 09:36:23.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031295 has a single transcript. 2021-10-25 09:36:23.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031296: ['FBtr0077951', 'FBtr0301087'] 2021-10-25 09:36:23.626 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1038506, 1038578)] 2021-10-25 09:36:23.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.628 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011743: ['FBtr0340069'] 2021-10-25 09:36:23.687 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011743 has a single transcript. 2021-10-25 09:36:23.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011745: ['FBtr0082652'] 2021-10-25 09:36:23.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011745 has a single transcript. 2021-10-25 09:36:23.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011746: ['FBtr0088559', 'FBtr0300501', 'FBtr0339284'] 2021-10-25 09:36:23.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031298: ['FBtr0077953', 'FBtr0332569'] 2021-10-25 09:36:23.763 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1081427, 1081577), (1081920, 1081976), (1082056, 1082119), (1082665, 1082788), (1082665, 1082791)] 2021-10-25 09:36:23.765 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.766 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.792 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9062479, 9074070), (9069626, 9074070), (9074450, 9074839), (9074459, 9074839), (9075088, 9075872), (9075945, 9076369)] 2021-10-25 09:36:23.794 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031299: ['FBtr0332570', 'FBtr0332571'] 2021-10-25 09:36:23.839 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1037422, 1037475), (1037569, 1037645), (1037590, 1037645), (1037740, 1038358), (1038434, 1045155), (1038434, 1040012), (1038437, 1040012), (1038437, 1045155), (1038437, 1043467), (1038458, 1043467), (1040078, 1045155), (1040078, 1043467), (1043521, 1045155), (1043524, 1045155), (1045248, 1047263), (1047390, 1047452), (1047575, 1047634), (1047729, 1047822), (1048148, 1048503), (1048558, 1049186), (1049246, 1050297), (1050392, 1050454), (1050609, 1053497), (1050609, 1050693), (1050609, 1051342), (1050609, 1051258), (1050759, 1051342)] 2021-10-25 09:36:23.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1050693, 1051378, 'FBtr0300377_exon_1') contains intron (1050759, 1051342) 2021-10-25 09:36:23.849 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300377_exon_1'] 2021-10-25 09:36:23.849 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.893 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1084836, 1084893), (1085136, 1085200), (1085309, 1085523), (1085680, 1085743), (1085861, 1085926), (1086026, 1087694), (1088106, 1102322), (1088106, 1101920), (1101968, 1102322)] 2021-10-25 09:36:23.895 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:23.895 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:23.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011747: ['FBtr0089173', 'FBtr0089171', 'FBtr0089172', 'FBtr0300497'] 2021-10-25 09:36:23.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031301: ['FBtr0077954'] 2021-10-25 09:36:23.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031301 has a single transcript. 2021-10-25 09:36:23.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031302: ['FBtr0077955'] 2021-10-25 09:36:23.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031302 has a single transcript. 2021-10-25 09:36:23.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031304: ['FBtr0077956'] 2021-10-25 09:36:23.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031304 has a single transcript. 2021-10-25 09:36:24.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031305: ['FBtr0077986'] 2021-10-25 09:36:24.001 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031305 has a single transcript. 2021-10-25 09:36:24.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031306: ['FBtr0077957', 'FBtr0332271'] 2021-10-25 09:36:24.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(115202, 115257), (116004, 116685), (116630, 116685), (118501, 118554), (118779, 118837), (118931, 119887), (120212, 120857), (121799, 121852), (121956, 122308), (123422, 123784), (123892, 129321), (129442, 129797), (129442, 129554), (129442, 129669)] 2021-10-25 09:36:24.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.063 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1135081, 1138620), (1139067, 1139123), (1139385, 1139482), (1139763, 1139828), (1139763, 1139831)] 2021-10-25 09:36:24.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031307: ['FBtr0077958'] 2021-10-25 09:36:24.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031307 has a single transcript. 2021-10-25 09:36:24.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031309: ['FBtr0077985'] 2021-10-25 09:36:24.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031309 has a single transcript. 2021-10-25 09:36:24.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031310: ['FBtr0077960'] 2021-10-25 09:36:24.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031310 has a single transcript. 2021-10-25 09:36:24.168 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031312: ['FBtr0077961', 'FBtr0331287'] 2021-10-25 09:36:24.220 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1158782, 1158856), (1159467, 1159755)] 2021-10-25 09:36:24.221 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1158660, 1159467, 'FBtr0077961_exon_1') contains intron (1158782, 1158856) 2021-10-25 09:36:24.221 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077961_exon_1'] 2021-10-25 09:36:24.222 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011754: ['FBtr0090002', 'FBtr0301500', 'FBtr0301501', 'FBtr0343587', 'FBtr0343648'] 2021-10-25 09:36:24.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031313: ['FBtr0077981', 'FBtr0077982', 'FBtr0331289'] 2021-10-25 09:36:24.381 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11695263, 11695823), (11695279, 11695823), (11695384, 11695823), (11695939, 11696402), (11696145, 11696402), (11696311, 11696402), (11696540, 11697065), (11697244, 11697310), (11697595, 11697660), (11697751, 11698298), (11698435, 11698499), (11698597, 11703289), (11698597, 11699322), (11698597, 11700620), (11699406, 11703289), (11701127, 11703289), (11703448, 11703508)] 2021-10-25 09:36:24.385 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.385 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1161219, 1161289), (1161869, 1161926), (1162146, 1162999), (1163149, 1163416), (1163149, 1163759)] 2021-10-25 09:36:24.389 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1162999, 1163886, 'FBtr0077982_exon_1') contains intron (1163149, 1163416) 2021-10-25 09:36:24.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077982_exon_1'] 2021-10-25 09:36:24.391 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264616: ['FBtr0333703'] 2021-10-25 09:36:24.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264616 has a single transcript. 2021-10-25 09:36:24.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264617: ['FBtr0333704', 'FBtr0333705'] 2021-10-25 09:36:24.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031314: ['FBtr0077962'] 2021-10-25 09:36:24.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031314 has a single transcript. 2021-10-25 09:36:24.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(56549, 57239), (57411, 59975), (60415, 60569), (60415, 62972)] 2021-10-25 09:36:24.529 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.529 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031315: ['FBtr0077964'] 2021-10-25 09:36:24.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031315 has a single transcript. 2021-10-25 09:36:24.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031317: ['FBtr0077979'] 2021-10-25 09:36:24.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031317 has a single transcript. 2021-10-25 09:36:24.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031318: ['FBtr0077966', 'FBtr0331288'] 2021-10-25 09:36:24.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1173319, 1173379), (1173829, 1173883), (1174130, 1174196), (1174266, 1174496), (1174570, 1174909), (1174987, 1175046), (1175173, 1175286), (1175523, 1175578), (1176043, 1176100), (1176881, 1176941), (1177191, 1177255)] 2021-10-25 09:36:24.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264618: ['FBtr0333707'] 2021-10-25 09:36:24.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264618 has a single transcript. 2021-10-25 09:36:24.621 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264672: ['FBtr0330685', 'FBtr0077767'] 2021-10-25 09:36:24.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011758: ['FBtr0074430', 'FBtr0334459'] 2021-10-25 09:36:24.688 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2381125, 2381188), (2382296, 2382348), (2382560, 2382616)] 2021-10-25 09:36:24.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031319: ['FBtr0077968', 'FBtr0344790', 'FBtr0308698', 'FBtr0335394', 'FBtr0335395'] 2021-10-25 09:36:24.690 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2381096, 2382296, 'FBtr0077767_exon_1') contains intron (2381125, 2381188) 2021-10-25 09:36:24.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077767_exon_1'] 2021-10-25 09:36:24.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.714 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17398516, 17401464), (17398521, 17401464), (17401693, 17401827)] 2021-10-25 09:36:24.716 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.717 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.770 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264674: ['FBtr0333763'] 2021-10-25 09:36:24.770 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264674 has a single transcript. 2021-10-25 09:36:24.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264675: ['FBtr0333769', 'FBtr0333770'] 2021-10-25 09:36:24.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011760: ['FBtr0070704', 'FBtr0070706', 'FBtr0070707', 'FBtr0307065'] 2021-10-25 09:36:24.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12044349, 12077154), (12044349, 12065730), (12065920, 12077154), (12077241, 12115375)] 2021-10-25 09:36:24.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1177861, 1177947), (1177868, 1177947), (1178044, 1178107), (1178467, 1178840), (1178467, 1178846), (1179069, 1179126), (1179196, 1179451), (1179196, 1179859), (1179525, 1179859), (1179937, 1179996), (1180123, 1180212), (1180449, 1180512), (1180926, 1180994), (1181793, 1181854), (1182104, 1182169)] 2021-10-25 09:36:24.846 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1179126, 1179937, 'FBtr0308698_exon_5') contains intron (1179196, 1179451) 2021-10-25 09:36:24.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1177689, 1178044, 'FBtr0335395_exon_1') contains intron (1177861, 1177947) 2021-10-25 09:36:24.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1179126, 1179937, 'FBtr0335395_exon_4') contains intron (1179196, 1179451) 2021-10-25 09:36:24.848 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1179996, 1180449, 'FBtr0335395_exon_5') contains intron (1180123, 1180212) 2021-10-25 09:36:24.848 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308698_exon_5', 'FBtr0335395_exon_1', 'FBtr0335395_exon_4', 'FBtr0335395_exon_5'] 2021-10-25 09:36:24.848 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264676: ['FBtr0344562'] 2021-10-25 09:36:24.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264676 has a single transcript. 2021-10-25 09:36:24.927 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4688028, 4691636), (4688317, 4691636), (4688672, 4691636), (4691844, 4698296)] 2021-10-25 09:36:24.928 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.929 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:24.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264677: ['FBtr0333773', 'FBtr0345927'] 2021-10-25 09:36:24.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22514681, 22514811)] 2021-10-25 09:36:24.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:24.990 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264678: ['FBtr0333774', 'FBtr0333775'] 2021-10-25 09:36:25.092 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031320: ['FBtr0077978'] 2021-10-25 09:36:25.092 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031320 has a single transcript. 2021-10-25 09:36:25.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031321: ['FBtr0077971'] 2021-10-25 09:36:25.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031321 has a single transcript. 2021-10-25 09:36:25.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031322: ['FBtr0307056', 'FBtr0307057', 'FBtr0077972', 'FBtr0335379'] 2021-10-25 09:36:25.112 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011761: ['FBtr0070749', 'FBtr0345745'] 2021-10-25 09:36:25.125 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12718051, 12718352), (12718051, 12730933)] 2021-10-25 09:36:25.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.127 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.164 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:25.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264679: ['FBtr0333776'] 2021-10-25 09:36:25.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264679 has a single transcript. 2021-10-25 09:36:25.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264691: ['FBtr0071368'] 2021-10-25 09:36:25.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264691 has a single transcript. 2021-10-25 09:36:25.228 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1186015, 1191402), (1186452, 1191402), (1191534, 1191598), (1191538, 1191598), (1191909, 1191969), (1192198, 1192255), (1192198, 1192267), (1192625, 1196215)] 2021-10-25 09:36:25.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011762: ['FBtr0076603'] 2021-10-25 09:36:25.238 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011762 has a single transcript. 2021-10-25 09:36:25.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264693: ['FBtr0073265', 'FBtr0310635', 'FBtr0310637', 'FBtr0073266', 'FBtr0310633', 'FBtr0073269', 'FBtr0113135', 'FBtr0073267', 'FBtr0310636', 'FBtr0073268', 'FBtr0310634', 'FBtr0345589'] 2021-10-25 09:36:25.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011763: ['FBtr0087740', 'FBtr0087741', 'FBtr0333149'] 2021-10-25 09:36:25.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13223112, 13225466), (13223660, 13225466), (13225624, 13225690), (13225751, 13225808), (13225751, 13225811), (13225938, 13226001), (13226335, 13226403), (13226639, 13226699), (13226782, 13226845), (13226929, 13226985)] 2021-10-25 09:36:25.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031323: ['FBtr0077977'] 2021-10-25 09:36:25.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031323 has a single transcript. 2021-10-25 09:36:25.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031324: ['FBtr0114498'] 2021-10-25 09:36:25.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031324 has a single transcript. 2021-10-25 09:36:25.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031327: ['FBtr0077920', 'FBtr0335383'] 2021-10-25 09:36:25.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011766: ['FBtr0084117', 'FBtr0084118', 'FBtr0084119', 'FBtr0334678', 'FBtr0345217', 'FBtr0346157'] 2021-10-25 09:36:25.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1240970, 1241050)] 2021-10-25 09:36:25.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.483 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031331: ['FBtr0305552', 'FBtr0343837'] 2021-10-25 09:36:25.616 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1334759, 1334818)] 2021-10-25 09:36:25.617 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.617 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4124852, 4124918), (4125079, 4125135), (4125500, 4125577), (4125808, 4125880), (4126702, 4126761), (4126931, 4126988), (4127162, 4131120), (4127162, 4128307), (4127162, 4128613), (4127162, 4129650), (4127162, 4130388), (4128973, 4129650), (4128973, 4131120), (4129791, 4130388), (4129791, 4131120), (4130643, 4131120), (4131236, 4131749), (4131889, 4131955), (4132203, 4133768), (4132212, 4134453), (4132212, 4133768), (4132212, 4133548), (4133656, 4133768), (4133822, 4134453)] 2021-10-25 09:36:25.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21621696, 21622811), (21623651, 21623838), (21624085, 21624244), (21624085, 21625164), (21624292, 21625164), (21625893, 21626023), (21626624, 21626691), (21626850, 21645515), (21626850, 21637752), (21626850, 21632132), (21626850, 21632923), (21645543, 21660215)] 2021-10-25 09:36:25.647 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21626023, 21626850, 'FBtr0084118_exon_2') contains intron (21626624, 21626691) 2021-10-25 09:36:25.648 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21626023, 21626850, 'FBtr0084119_exon_2') contains intron (21626624, 21626691) 2021-10-25 09:36:25.649 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21626023, 21626850, 'FBtr0334678_exon_2') contains intron (21626624, 21626691) 2021-10-25 09:36:25.649 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21626023, 21626850, 'FBtr0345217_exon_2') contains intron (21626624, 21626691) 2021-10-25 09:36:25.650 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084118_exon_2', 'FBtr0084119_exon_2', 'FBtr0334678_exon_2', 'FBtr0345217_exon_2'] 2021-10-25 09:36:25.650 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031332: ['FBtr0077948', 'FBtr0343845'] 2021-10-25 09:36:25.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1352641, 1352697)] 2021-10-25 09:36:25.753 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:25.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031333: ['FBtr0077947'] 2021-10-25 09:36:25.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031333 has a single transcript. 2021-10-25 09:36:25.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031335: ['FBtr0077944'] 2021-10-25 09:36:25.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031335 has a single transcript. 2021-10-25 09:36:25.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031337: ['FBtr0077926', 'FBtr0343838', 'FBtr0343839'] 2021-10-25 09:36:25.910 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1368109, 1368214), (1368313, 1368365), (1368479, 1368529)] 2021-10-25 09:36:25.911 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1368088, 1368313, 'FBtr0077926_exon_1') contains intron (1368109, 1368214) 2021-10-25 09:36:25.912 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1367995, 1368313, 'FBtr0343838_exon_1') contains intron (1368109, 1368214) 2021-10-25 09:36:25.912 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077926_exon_1', 'FBtr0343838_exon_1'] 2021-10-25 09:36:25.913 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:25.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011768: ['FBtr0082290'] 2021-10-25 09:36:25.937 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011768 has a single transcript. 2021-10-25 09:36:25.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011769: ['FBtr0076498', 'FBtr0303475'] 2021-10-25 09:36:26.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9370702, 9370764), (9370816, 9370903), (9371040, 9371212)] 2021-10-25 09:36:26.001 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.002 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031343: ['FBtr0077936', 'FBtr0077937', 'FBtr0077938', 'FBtr0077939', 'FBtr0334821', 'FBtr0334822'] 2021-10-25 09:36:26.084 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011770: ['FBtr0071472'] 2021-10-25 09:36:26.084 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011770 has a single transcript. 2021-10-25 09:36:26.095 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011771: ['FBtr0078510'] 2021-10-25 09:36:26.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011771 has a single transcript. 2021-10-25 09:36:26.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011774: ['FBtr0082385', 'FBtr0334308'] 2021-10-25 09:36:26.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11410810, 11411055), (11411118, 11411219)] 2021-10-25 09:36:26.162 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11411055, 11412440, 'FBtr0082385_exon_2') contains intron (11411118, 11411219) 2021-10-25 09:36:26.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082385_exon_2'] 2021-10-25 09:36:26.163 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1499421, 1499674), (1499421, 1499557), (1500045, 1500113), (1500199, 1500408), (1500202, 1500408)] 2021-10-25 09:36:26.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264694: ['FBtr0082406'] 2021-10-25 09:36:26.215 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264694 has a single transcript. 2021-10-25 09:36:26.238 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011785: ['FBtr0084604'] 2021-10-25 09:36:26.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011785 has a single transcript. 2021-10-25 09:36:26.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011787: ['FBtr0076511'] 2021-10-25 09:36:26.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011787 has a single transcript. 2021-10-25 09:36:26.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011802: ['FBtr0076292', 'FBtr0334100'] 2021-10-25 09:36:26.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264695: ['FBtr0307493', 'FBtr0080898', 'FBtr0080900', 'FBtr0080906', 'FBtr0301829', 'FBtr0080907', 'FBtr0080896', 'FBtr0301827', 'FBtr0080895', 'FBtr0080905', 'FBtr0080903', 'FBtr0080897', 'FBtr0307492', 'FBtr0080901', 'FBtr0307496', 'FBtr0301828', 'FBtr0307495', 'FBtr0080902', 'FBtr0307494', 'FBtr0080899', 'FBtr0346712'] 2021-10-25 09:36:26.311 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10462778, 10462836)] 2021-10-25 09:36:26.312 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.313 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011812: ['FBtr0088762'] 2021-10-25 09:36:26.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011812 has a single transcript. 2021-10-25 09:36:26.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011817: ['FBtr0076754', 'FBtr0076755', 'FBtr0076756', 'FBtr0076757', 'FBtr0076758', 'FBtr0076759', 'FBtr0333223'] 2021-10-25 09:36:26.501 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031344: ['FBtr0077933', 'FBtr0334820'] 2021-10-25 09:36:26.552 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1501036, 1501096), (1501036, 1501098), (1501872, 1501932), (1502184, 1502610)] 2021-10-25 09:36:26.554 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.554 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.598 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7979173, 7979509), (7979173, 7980399), (7979680, 7980399), (7980982, 8039874), (8040004, 8045890), (8045946, 8046569), (8047161, 8047245), (8047447, 8047506), (8047600, 8048069), (8047600, 8049868), (8048443, 8049868)] 2021-10-25 09:36:26.600 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7979045, 7979680, 'FBtr0076755_exon_1') contains intron (7979173, 7979509) 2021-10-25 09:36:26.601 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7979045, 7979680, 'FBtr0076758_exon_1') contains intron (7979173, 7979509) 2021-10-25 09:36:26.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076755_exon_1', 'FBtr0076758_exon_1'] 2021-10-25 09:36:26.602 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031345: ['FBtr0077919'] 2021-10-25 09:36:26.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031345 has a single transcript. 2021-10-25 09:36:26.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031347: ['FBtr0077917'] 2021-10-25 09:36:26.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031347 has a single transcript. 2021-10-25 09:36:26.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031351: ['FBtr0077876'] 2021-10-25 09:36:26.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031351 has a single transcript. 2021-10-25 09:36:26.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031356: ['FBtr0077912'] 2021-10-25 09:36:26.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031356 has a single transcript. 2021-10-25 09:36:26.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031357: ['FBtr0077882', 'FBtr0333542'] 2021-10-25 09:36:26.711 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1710537, 1710598), (1710697, 1710850)] 2021-10-25 09:36:26.712 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.713 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.791 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031359: ['FBtr0077910', 'FBtr0305618', 'FBtr0306167'] 2021-10-25 09:36:26.878 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1717229, 1717597), (1717815, 1717877), (1718151, 1718226), (1718358, 1718420), (1718491, 1718674), (1718491, 1718695), (1718491, 1718739), (1718903, 1723881)] 2021-10-25 09:36:26.880 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.880 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.901 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16766756, 16768583), (16767110, 16768583), (16767941, 16768583), (16767954, 16768583), (16767959, 16768583), (16768884, 16769458), (16768884, 16769146), (16769290, 16770456), (16769602, 16770456), (16770837, 16770910), (16770974, 16771042), (16771141, 16771941), (16771141, 16771342), (16771141, 16773276), (16771141, 16772436), (16771446, 16774449), (16772045, 16774449), (16772540, 16774449), (16773380, 16774449), (16774857, 16775210), (16774857, 16776262), (16774857, 16775682), (16775381, 16776849), (16775853, 16776849), (16776433, 16776849), (16777439, 16778004), (16777439, 16779727), (16777439, 16779092), (16777439, 16777630), (16777439, 16778389), (16777748, 16780549), (16778122, 16780549), (16778507, 16780549), (16779210, 16780549), (16779845, 16780549), (16780813, 16782343), (16782553, 16782774), (16783661, 16783832), (16783661, 16784250), (16783911, 16784665), (16784329, 16784665), (16785841, 16785908), (16786814, 16787078), (16786814, 16788020), (16786814, 16787516), (16787580, 16788020)] 2021-10-25 09:36:26.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:26.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:26.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011818: ['FBtr0077777', 'FBtr0077778', 'FBtr0077779', 'FBtr0077780'] 2021-10-25 09:36:26.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031360: ['FBtr0077884'] 2021-10-25 09:36:26.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031360 has a single transcript. 2021-10-25 09:36:27.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031361: ['FBtr0077904', 'FBtr0333543'] 2021-10-25 09:36:27.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2493296, 2495373), (2495487, 2495569), (2495888, 2496398)] 2021-10-25 09:36:27.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.034 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.054 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077777': ['FBtr0077780']} 2021-10-25 09:36:27.055 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0077780']] 2021-10-25 09:36:27.059 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1731816, 1731879), (1732080, 1732143)] 2021-10-25 09:36:27.061 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.061 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031364: ['FBtr0077887'] 2021-10-25 09:36:27.135 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031364 has a single transcript. 2021-10-25 09:36:27.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031365: ['FBtr0077901'] 2021-10-25 09:36:27.147 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031365 has a single transcript. 2021-10-25 09:36:27.153 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031367: ['FBtr0077894'] 2021-10-25 09:36:27.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031367 has a single transcript. 2021-10-25 09:36:27.158 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011822: ['FBtr0070100'] 2021-10-25 09:36:27.159 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011822 has a single transcript. 2021-10-25 09:36:27.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031372: ['FBtr0077891', 'FBtr0334824'] 2021-10-25 09:36:27.169 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011824: ['FBtr0071639'] 2021-10-25 09:36:27.169 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011824 has a single transcript. 2021-10-25 09:36:27.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011826: ['FBtr0074294', 'FBtr0309793', 'FBtr0305593'] 2021-10-25 09:36:27.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:27.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.254 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:27.255 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031373: ['FBtr0347155', 'FBtr0347156'] 2021-10-25 09:36:27.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:27.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.338 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.370 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011828: ['FBtr0072951', 'FBtr0072952', 'FBtr0072953', 'FBtr0072954', 'FBtr0072950'] 2021-10-25 09:36:27.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031374: ['FBtr0077811', 'FBtr0110882', 'FBtr0110883', 'FBtr0113011', 'FBtr0113012', 'FBtr0309828', 'FBtr0333006', 'FBtr0333007'] 2021-10-25 09:36:27.506 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2604279, 2607692), (2607874, 2608140), (2608319, 2608437), (2608644, 2610493), (2611159, 2611315), (2611557, 2611638), (2611710, 2611787), (2612003, 2629140), (2629526, 2629913), (2629584, 2629913), (2629596, 2629913)] 2021-10-25 09:36:27.509 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.509 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.638 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1885318, 1909668), (1909992, 1910066), (1910149, 1932055), (1911869, 1913208), (1912234, 1913208), (1913663, 1932055), (1928575, 1932055), (1932147, 1933805), (1934049, 1934118), (1934328, 1934478), (1934898, 1934960), (1935683, 1935738), (1936991, 1937053), (1937373, 1937440), (1937583, 1937865), (1937583, 1938507), (1937910, 1938507), (1938619, 1941581), (1938619, 1941754), (1938619, 1938864), (1941393, 1941581), (1941677, 1941754), (1941903, 1941970), (1942046, 1942107), (1942182, 1942250), (1942451, 1942509), (1942663, 1942784)] 2021-10-25 09:36:27.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011829: ['FBtr0081493', 'FBtr0081494', 'FBtr0081495'] 2021-10-25 09:36:27.834 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21184021, 21184081), (21184222, 21184277), (21185989, 21186073), (21186239, 21188147), (21188920, 21195062), (21195355, 21198652), (21195355, 21198732), (21195496, 21198652)] 2021-10-25 09:36:27.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:27.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:27.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011832: ['FBtr0077806'] 2021-10-25 09:36:27.958 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011832 has a single transcript. 2021-10-25 09:36:27.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011834: ['FBtr0077272'] 2021-10-25 09:36:27.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011834 has a single transcript. 2021-10-25 09:36:27.977 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011836: ['FBtr0076361', 'FBtr0332688'] 2021-10-25 09:36:28.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9885773, 9885833), (9886044, 9886102), (9886515, 9886573), (9888339, 9888401), (9888456, 9888519)] 2021-10-25 09:36:28.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:28.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264696: ['FBtr0333890'] 2021-10-25 09:36:28.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264696 has a single transcript. 2021-10-25 09:36:28.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264697: ['FBtr0333868'] 2021-10-25 09:36:28.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264697 has a single transcript. 2021-10-25 09:36:28.062 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031375: ['FBtr0077870', 'FBtr0330200', 'FBtr0330201', 'FBtr0330202'] 2021-10-25 09:36:28.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264698: ['FBtr0333905'] 2021-10-25 09:36:28.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264698 has a single transcript. 2021-10-25 09:36:28.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264699: ['FBtr0333915'] 2021-10-25 09:36:28.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264699 has a single transcript. 2021-10-25 09:36:28.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264700: ['FBtr0333900'] 2021-10-25 09:36:28.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264700 has a single transcript. 2021-10-25 09:36:28.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264701: ['FBtr0333906'] 2021-10-25 09:36:28.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264701 has a single transcript. 2021-10-25 09:36:28.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264702: ['FBtr0333936'] 2021-10-25 09:36:28.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264702 has a single transcript. 2021-10-25 09:36:28.101 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264703: ['FBtr0333937'] 2021-10-25 09:36:28.101 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264703 has a single transcript. 2021-10-25 09:36:28.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264704: ['FBtr0333938'] 2021-10-25 09:36:28.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264704 has a single transcript. 2021-10-25 09:36:28.114 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264705: ['FBtr0333950'] 2021-10-25 09:36:28.114 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264705 has a single transcript. 2021-10-25 09:36:28.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011837: ['FBtr0073683', 'FBtr0333756', 'FBtr0345165'] 2021-10-25 09:36:28.121 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264706: ['FBtr0333951'] 2021-10-25 09:36:28.121 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264706 has a single transcript. 2021-10-25 09:36:28.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264707: ['FBtr0333952', 'FBtr0333953', 'FBtr0333954', 'FBtr0333955', 'FBtr0333956', 'FBtr0333957', 'FBtr0333958', 'FBtr0333959', 'FBtr0333960', 'FBtr0333961', 'FBtr0333962'] 2021-10-25 09:36:28.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1952879, 1954313), (1952879, 1969952)] 2021-10-25 09:36:28.184 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:28.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.201 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077870': ['FBtr0330201', 'FBtr0330202']} 2021-10-25 09:36:28.202 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330201', 'FBtr0330202']] 2021-10-25 09:36:28.207 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12659548, 12660533), (12660867, 12677736), (12678056, 12678333)] 2021-10-25 09:36:28.208 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:28.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031377: ['FBtr0077869'] 2021-10-25 09:36:28.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031377 has a single transcript. 2021-10-25 09:36:28.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031378: ['FBtr0077814'] 2021-10-25 09:36:28.276 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031378 has a single transcript. 2021-10-25 09:36:28.283 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031379: ['FBtr0077815'] 2021-10-25 09:36:28.283 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031379 has a single transcript. 2021-10-25 09:36:28.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031381: ['FBtr0077816'] 2021-10-25 09:36:28.289 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031381 has a single transcript. 2021-10-25 09:36:28.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031384: ['FBtr0301066', 'FBtr0301067', 'FBtr0301068', 'FBtr0330671', 'FBtr0330672', 'FBtr0334773', 'FBtr0334774'] 2021-10-25 09:36:28.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011840: ['FBtr0083499'] 2021-10-25 09:36:28.346 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011840 has a single transcript. 2021-10-25 09:36:28.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011844: ['FBtr0075834'] 2021-10-25 09:36:28.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011844 has a single transcript. 2021-10-25 09:36:28.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011845: ['FBtr0084649'] 2021-10-25 09:36:28.364 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011845 has a single transcript. 2021-10-25 09:36:28.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011848: ['FBtr0086446'] 2021-10-25 09:36:28.372 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011848 has a single transcript. 2021-10-25 09:36:28.380 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011849: ['FBtr0086447'] 2021-10-25 09:36:28.380 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011849 has a single transcript. 2021-10-25 09:36:28.387 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011850: ['FBtr0086448'] 2021-10-25 09:36:28.388 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011850 has a single transcript. 2021-10-25 09:36:28.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011851: ['FBtr0072685'] 2021-10-25 09:36:28.395 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011851 has a single transcript. 2021-10-25 09:36:28.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011852: ['FBtr0072686'] 2021-10-25 09:36:28.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011852 has a single transcript. 2021-10-25 09:36:28.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011853: ['FBtr0072687'] 2021-10-25 09:36:28.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011853 has a single transcript. 2021-10-25 09:36:28.418 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011854: ['FBtr0072690'] 2021-10-25 09:36:28.418 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011854 has a single transcript. 2021-10-25 09:36:28.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011855: ['FBtr0072691'] 2021-10-25 09:36:28.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011855 has a single transcript. 2021-10-25 09:36:28.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011858: ['FBtr0083267'] 2021-10-25 09:36:28.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011858 has a single transcript. 2021-10-25 09:36:28.443 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011859: ['FBtr0077872'] 2021-10-25 09:36:28.443 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011859 has a single transcript. 2021-10-25 09:36:28.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011860: ['FBtr0077821'] 2021-10-25 09:36:28.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011860 has a single transcript. 2021-10-25 09:36:28.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011861: ['FBtr0079528'] 2021-10-25 09:36:28.459 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011861 has a single transcript. 2021-10-25 09:36:28.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011862: ['FBtr0089613'] 2021-10-25 09:36:28.467 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011862 has a single transcript. 2021-10-25 09:36:28.475 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011863: ['FBtr0080666'] 2021-10-25 09:36:28.475 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011863 has a single transcript. 2021-10-25 09:36:28.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(277755, 278177), (278331, 278400), (281056, 281120), (281056, 281123), (281734, 282086), (282658, 286597), (288474, 288769), (289280, 289370), (290327, 290749), (291112, 291313), (291397, 298958), (293185, 298958), (298139, 298958), (299016, 300894), (300773, 300894), (300848, 300894), (300848, 300900), (301104, 301162), (301108, 301162), (301681, 301757), (302301, 302359), (302522, 302584), (302691, 302748)] 2021-10-25 09:36:28.478 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333952_exon_3') contains intron (301104, 301162) 2021-10-25 09:36:28.478 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333954_exon_2') contains intron (301104, 301162) 2021-10-25 09:36:28.479 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333956_exon_3') contains intron (301104, 301162) 2021-10-25 09:36:28.480 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300585, 301681, 'FBtr0333957_exon_1') contains intron (300773, 300894) 2021-10-25 09:36:28.480 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333958_exon_3') contains intron (301104, 301162) 2021-10-25 09:36:28.482 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333961_exon_12') contains intron (301104, 301162) 2021-10-25 09:36:28.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011864: ['FBtr0080665'] 2021-10-25 09:36:28.483 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011864 has a single transcript. 2021-10-25 09:36:28.483 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (300894, 301681, 'FBtr0333962_exon_12') contains intron (301104, 301162) 2021-10-25 09:36:28.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0333952_exon_3', 'FBtr0333954_exon_2', 'FBtr0333956_exon_3', 'FBtr0333957_exon_1', 'FBtr0333958_exon_3', 'FBtr0333961_exon_12', 'FBtr0333962_exon_12'] 2021-10-25 09:36:28.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.489 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2010313, 2026767), (2011785, 2017523), (2017851, 2026767), (2024265, 2026767), (2027210, 2027278), (2027791, 2027851), (2028050, 2028112), (2028249, 2028320), (2028249, 2028302), (2029028, 2029091), (2029418, 2029493), (2029756, 2029835)] 2021-10-25 09:36:28.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011865: ['FBtr0080664'] 2021-10-25 09:36:28.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011865 has a single transcript. 2021-10-25 09:36:28.492 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:28.492 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011866: ['FBtr0080663'] 2021-10-25 09:36:28.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011866 has a single transcript. 2021-10-25 09:36:28.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011867: ['FBtr0087055'] 2021-10-25 09:36:28.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011867 has a single transcript. 2021-10-25 09:36:28.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011868: ['FBtr0086659'] 2021-10-25 09:36:28.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011868 has a single transcript. 2021-10-25 09:36:28.522 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011869: ['FBtr0086312'] 2021-10-25 09:36:28.523 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011869 has a single transcript. 2021-10-25 09:36:28.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011870: ['FBtr0086314'] 2021-10-25 09:36:28.530 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011870 has a single transcript. 2021-10-25 09:36:28.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011871: ['FBtr0071630'] 2021-10-25 09:36:28.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011871 has a single transcript. 2021-10-25 09:36:28.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011872: ['FBtr0071581'] 2021-10-25 09:36:28.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011872 has a single transcript. 2021-10-25 09:36:28.554 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011877: ['FBtr0087901'] 2021-10-25 09:36:28.554 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011877 has a single transcript. 2021-10-25 09:36:28.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011878: ['FBtr0087900'] 2021-10-25 09:36:28.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011878 has a single transcript. 2021-10-25 09:36:28.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011879: ['FBtr0086908'] 2021-10-25 09:36:28.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011879 has a single transcript. 2021-10-25 09:36:28.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011880: ['FBtr0085984'] 2021-10-25 09:36:28.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011880 has a single transcript. 2021-10-25 09:36:28.587 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011881: ['FBtr0087713'] 2021-10-25 09:36:28.587 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011881 has a single transcript. 2021-10-25 09:36:28.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011882: ['FBtr0087658'] 2021-10-25 09:36:28.595 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011882 has a single transcript. 2021-10-25 09:36:28.603 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011883: ['FBtr0087659'] 2021-10-25 09:36:28.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011883 has a single transcript. 2021-10-25 09:36:28.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011884: ['FBtr0087660'] 2021-10-25 09:36:28.611 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011884 has a single transcript. 2021-10-25 09:36:28.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011885: ['FBtr0087661'] 2021-10-25 09:36:28.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011885 has a single transcript. 2021-10-25 09:36:28.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011887: ['FBtr0085983'] 2021-10-25 09:36:28.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011887 has a single transcript. 2021-10-25 09:36:28.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011888: ['FBtr0086013'] 2021-10-25 09:36:28.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011888 has a single transcript. 2021-10-25 09:36:28.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011889: ['FBtr0086014'] 2021-10-25 09:36:28.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011889 has a single transcript. 2021-10-25 09:36:28.650 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011890: ['FBtr0086007'] 2021-10-25 09:36:28.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011890 has a single transcript. 2021-10-25 09:36:28.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011891: ['FBtr0086017'] 2021-10-25 09:36:28.658 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011891 has a single transcript. 2021-10-25 09:36:28.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011892: ['FBtr0086190'] 2021-10-25 09:36:28.666 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011892 has a single transcript. 2021-10-25 09:36:28.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011893: ['FBtr0086189'] 2021-10-25 09:36:28.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011893 has a single transcript. 2021-10-25 09:36:28.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011894: ['FBtr0086188'] 2021-10-25 09:36:28.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011894 has a single transcript. 2021-10-25 09:36:28.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011895: ['FBtr0086187'] 2021-10-25 09:36:28.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011895 has a single transcript. 2021-10-25 09:36:28.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011896: ['FBtr0087688'] 2021-10-25 09:36:28.698 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011896 has a single transcript. 2021-10-25 09:36:28.705 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011897: ['FBtr0086334'] 2021-10-25 09:36:28.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011897 has a single transcript. 2021-10-25 09:36:28.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011902: ['FBtr0079596'] 2021-10-25 09:36:28.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011902 has a single transcript. 2021-10-25 09:36:28.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011904: ['FBtr0081660'] 2021-10-25 09:36:28.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011904 has a single transcript. 2021-10-25 09:36:28.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011905: ['FBtr0082544'] 2021-10-25 09:36:28.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011905 has a single transcript. 2021-10-25 09:36:28.737 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011906: ['FBtr0088703'] 2021-10-25 09:36:28.737 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011906 has a single transcript. 2021-10-25 09:36:28.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011909: ['FBtr0089303'] 2021-10-25 09:36:28.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011909 has a single transcript. 2021-10-25 09:36:28.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011910: ['FBtr0089302'] 2021-10-25 09:36:28.752 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011910 has a single transcript. 2021-10-25 09:36:28.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011915: ['FBtr0088071'] 2021-10-25 09:36:28.758 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011915 has a single transcript. 2021-10-25 09:36:28.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011916: ['FBtr0088086'] 2021-10-25 09:36:28.766 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011916 has a single transcript. 2021-10-25 09:36:28.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011919: ['FBtr0081706'] 2021-10-25 09:36:28.774 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011919 has a single transcript. 2021-10-25 09:36:28.782 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011921: ['FBtr0088465'] 2021-10-25 09:36:28.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011921 has a single transcript. 2021-10-25 09:36:28.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011927: ['FBtr0075713'] 2021-10-25 09:36:28.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011927 has a single transcript. 2021-10-25 09:36:28.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011928: ['FBtr0075681'] 2021-10-25 09:36:28.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011928 has a single transcript. 2021-10-25 09:36:28.808 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011931: ['FBtr0085982'] 2021-10-25 09:36:28.808 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011931 has a single transcript. 2021-10-25 09:36:28.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011932: ['FBtr0085981'] 2021-10-25 09:36:28.816 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011932 has a single transcript. 2021-10-25 09:36:28.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011933: ['FBtr0086015'] 2021-10-25 09:36:28.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011933 has a single transcript. 2021-10-25 09:36:28.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011934: ['FBtr0085989'] 2021-10-25 09:36:28.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011934 has a single transcript. 2021-10-25 09:36:28.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011935: ['FBtr0086004'] 2021-10-25 09:36:28.839 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011935 has a single transcript. 2021-10-25 09:36:28.840 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031388: ['FBtr0077827', 'FBtr0334779'] 2021-10-25 09:36:28.846 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011936: ['FBtr0100016'] 2021-10-25 09:36:28.847 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011936 has a single transcript. 2021-10-25 09:36:28.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011937: ['FBtr0100015'] 2021-10-25 09:36:28.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011937 has a single transcript. 2021-10-25 09:36:28.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011938: ['FBtr0086016'] 2021-10-25 09:36:28.863 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011938 has a single transcript. 2021-10-25 09:36:28.870 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011944: ['FBtr0083501'] 2021-10-25 09:36:28.870 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011944 has a single transcript. 2021-10-25 09:36:28.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011945: ['FBtr0083469'] 2021-10-25 09:36:28.878 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011945 has a single transcript. 2021-10-25 09:36:28.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011948: ['FBtr0073860'] 2021-10-25 09:36:28.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011948 has a single transcript. 2021-10-25 09:36:28.893 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011949: ['FBtr0073861'] 2021-10-25 09:36:28.893 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011949 has a single transcript. 2021-10-25 09:36:28.892 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2080123, 2080207), (2081066, 2081131), (2081066, 2081134)] 2021-10-25 09:36:28.894 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:28.894 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:28.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011950: ['FBtr0073862'] 2021-10-25 09:36:28.900 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011950 has a single transcript. 2021-10-25 09:36:28.907 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011951: ['FBtr0073863'] 2021-10-25 09:36:28.908 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011951 has a single transcript. 2021-10-25 09:36:28.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011952: ['FBtr0073857'] 2021-10-25 09:36:28.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011952 has a single transcript. 2021-10-25 09:36:28.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011953: ['FBtr0073871'] 2021-10-25 09:36:28.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011953 has a single transcript. 2021-10-25 09:36:28.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011954: ['FBtr0077184'] 2021-10-25 09:36:28.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011954 has a single transcript. 2021-10-25 09:36:28.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011955: ['FBtr0086006'] 2021-10-25 09:36:28.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011955 has a single transcript. 2021-10-25 09:36:28.946 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011956: ['FBtr0085985'] 2021-10-25 09:36:28.946 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011956 has a single transcript. 2021-10-25 09:36:28.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011957: ['FBtr0085980'] 2021-10-25 09:36:28.953 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011957 has a single transcript. 2021-10-25 09:36:28.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011958: ['FBtr0085979'] 2021-10-25 09:36:28.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011958 has a single transcript. 2021-10-25 09:36:28.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011959: ['FBtr0081809'] 2021-10-25 09:36:28.968 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011959 has a single transcript. 2021-10-25 09:36:28.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031389: ['FBtr0077854', 'FBtr0334781'] 2021-10-25 09:36:28.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011960: ['FBtr0081810'] 2021-10-25 09:36:28.976 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011960 has a single transcript. 2021-10-25 09:36:28.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011961: ['FBtr0081811'] 2021-10-25 09:36:28.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011961 has a single transcript. 2021-10-25 09:36:28.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011962: ['FBtr0081812'] 2021-10-25 09:36:28.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011962 has a single transcript. 2021-10-25 09:36:28.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011963: ['FBtr0081813'] 2021-10-25 09:36:28.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011963 has a single transcript. 2021-10-25 09:36:29.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011965: ['FBtr0078790'] 2021-10-25 09:36:29.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011965 has a single transcript. 2021-10-25 09:36:29.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011966: ['FBtr0081923'] 2021-10-25 09:36:29.014 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011966 has a single transcript. 2021-10-25 09:36:29.021 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011970: ['FBtr0082241'] 2021-10-25 09:36:29.021 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011970 has a single transcript. 2021-10-25 09:36:29.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2129070, 2129132)] 2021-10-25 09:36:29.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011971: ['FBtr0082919'] 2021-10-25 09:36:29.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011971 has a single transcript. 2021-10-25 09:36:29.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011974: ['FBtr0073865'] 2021-10-25 09:36:29.037 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011974 has a single transcript. 2021-10-25 09:36:29.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011975: ['FBtr0073858'] 2021-10-25 09:36:29.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011975 has a single transcript. 2021-10-25 09:36:29.053 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011976: ['FBtr0073859'] 2021-10-25 09:36:29.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011976 has a single transcript. 2021-10-25 09:36:29.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011977: ['FBtr0073872'] 2021-10-25 09:36:29.060 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011977 has a single transcript. 2021-10-25 09:36:29.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011980: ['FBtr0073886'] 2021-10-25 09:36:29.067 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011980 has a single transcript. 2021-10-25 09:36:29.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264708: ['FBtr0333965'] 2021-10-25 09:36:29.070 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264708 has a single transcript. 2021-10-25 09:36:29.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011981: ['FBtr0073866'] 2021-10-25 09:36:29.074 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011981 has a single transcript. 2021-10-25 09:36:29.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264709: ['FBtr0333968'] 2021-10-25 09:36:29.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264709 has a single transcript. 2021-10-25 09:36:29.082 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011982: ['FBtr0073885'] 2021-10-25 09:36:29.082 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011982 has a single transcript. 2021-10-25 09:36:29.086 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264710: ['FBtr0333966'] 2021-10-25 09:36:29.086 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264710 has a single transcript. 2021-10-25 09:36:29.089 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011983: ['FBtr0073870'] 2021-10-25 09:36:29.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011983 has a single transcript. 2021-10-25 09:36:29.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264711: ['FBtr0333973', 'FBtr0333974'] 2021-10-25 09:36:29.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011984: ['FBtr0077613'] 2021-10-25 09:36:29.097 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011984 has a single transcript. 2021-10-25 09:36:29.104 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011985: ['FBtr0077577'] 2021-10-25 09:36:29.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011985 has a single transcript. 2021-10-25 09:36:29.107 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031390: ['FBtr0077853', 'FBtr0301660', 'FBtr0334814'] 2021-10-25 09:36:29.111 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011986: ['FBtr0077142'] 2021-10-25 09:36:29.111 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011986 has a single transcript. 2021-10-25 09:36:29.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011987: ['FBtr0088156'] 2021-10-25 09:36:29.119 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011987 has a single transcript. 2021-10-25 09:36:29.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011993: ['FBtr0083497'] 2021-10-25 09:36:29.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011993 has a single transcript. 2021-10-25 09:36:29.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011994: ['FBtr0083496'] 2021-10-25 09:36:29.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011994 has a single transcript. 2021-10-25 09:36:29.141 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011998: ['FBtr0081536'] 2021-10-25 09:36:29.141 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011998 has a single transcript. 2021-10-25 09:36:29.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21645587, 21652181), (21652389, 21661219), (21659162, 21661219), (21662770, 21662942), (21663549, 21663697), (21664466, 21664912), (21665276, 21665387), (21665715, 21665777)] 2021-10-25 09:36:29.148 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.148 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0011999: ['FBtr0081535'] 2021-10-25 09:36:29.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0011999 has a single transcript. 2021-10-25 09:36:29.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012000: ['FBtr0081561'] 2021-10-25 09:36:29.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012000 has a single transcript. 2021-10-25 09:36:29.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012001: ['FBtr0081558'] 2021-10-25 09:36:29.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012001 has a single transcript. 2021-10-25 09:36:29.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012002: ['FBtr0083466'] 2021-10-25 09:36:29.172 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012002 has a single transcript. 2021-10-25 09:36:29.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012003: ['FBtr0083799'] 2021-10-25 09:36:29.179 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012003 has a single transcript. 2021-10-25 09:36:29.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012004: ['FBtr0083792'] 2021-10-25 09:36:29.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012004 has a single transcript. 2021-10-25 09:36:29.187 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2137794, 2137882), (2137926, 2137983), (2138155, 2139629), (2138158, 2139629), (2139673, 2139727), (2139676, 2139727), (2140312, 2140379), (2141070, 2141128), (2141722, 2141784), (2142132, 2142190), (2142580, 2142641), (2143391, 2143448), (2143849, 2143919), (2144053, 2144118), (2144366, 2144456), (2144625, 2144804)] 2021-10-25 09:36:29.190 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.190 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012009: ['FBtr0075856'] 2021-10-25 09:36:29.194 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012009 has a single transcript. 2021-10-25 09:36:29.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012010: ['FBtr0075847'] 2021-10-25 09:36:29.201 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012010 has a single transcript. 2021-10-25 09:36:29.209 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012011: ['FBtr0083268'] 2021-10-25 09:36:29.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012011 has a single transcript. 2021-10-25 09:36:29.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012016: ['FBtr0089298'] 2021-10-25 09:36:29.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012016 has a single transcript. 2021-10-25 09:36:29.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012017: ['FBtr0089299'] 2021-10-25 09:36:29.223 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012017 has a single transcript. 2021-10-25 09:36:29.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264712: ['FBtr0078792', 'FBtr0333810', 'FBtr0309312'] 2021-10-25 09:36:29.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012018: ['FBtr0089297'] 2021-10-25 09:36:29.230 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012018 has a single transcript. 2021-10-25 09:36:29.237 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012024: ['FBtr0081884'] 2021-10-25 09:36:29.237 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012024 has a single transcript. 2021-10-25 09:36:29.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012025: ['FBtr0081885'] 2021-10-25 09:36:29.244 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012025 has a single transcript. 2021-10-25 09:36:29.250 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012026: ['FBtr0081886'] 2021-10-25 09:36:29.251 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012026 has a single transcript. 2021-10-25 09:36:29.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012027: ['FBtr0081894'] 2021-10-25 09:36:29.258 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012027 has a single transcript. 2021-10-25 09:36:29.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012028: ['FBtr0081895'] 2021-10-25 09:36:29.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012028 has a single transcript. 2021-10-25 09:36:29.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012034: ['FBtr0078413', 'FBtr0078414', 'FBtr0333126'] 2021-10-25 09:36:29.306 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5394102, 5394230), (5394393, 5394477), (5394727, 5395522), (5395763, 5396006)] 2021-10-25 09:36:29.307 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.308 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031391: ['FBtr0077852', 'FBtr0334813'] 2021-10-25 09:36:29.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21272153, 21272247), (21272437, 21272498), (21272667, 21272722), (21272877, 21272950), (21273689, 21276194), (21273689, 21279474)] 2021-10-25 09:36:29.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2146813, 2146885)] 2021-10-25 09:36:29.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264713: ['FBtr0334045'] 2021-10-25 09:36:29.440 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264713 has a single transcript. 2021-10-25 09:36:29.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264714: ['FBtr0334046'] 2021-10-25 09:36:29.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264714 has a single transcript. 2021-10-25 09:36:29.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264715: ['FBtr0334050'] 2021-10-25 09:36:29.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264715 has a single transcript. 2021-10-25 09:36:29.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012036: ['FBtr0079806', 'FBtr0332597'] 2021-10-25 09:36:29.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031392: ['FBtr0077830', 'FBtr0077831', 'FBtr0330657'] 2021-10-25 09:36:29.465 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264716: ['FBtr0334049'] 2021-10-25 09:36:29.465 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264716 has a single transcript. 2021-10-25 09:36:29.472 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264717: ['FBtr0334051'] 2021-10-25 09:36:29.472 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264717 has a single transcript. 2021-10-25 09:36:29.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264719: ['FBtr0334058'] 2021-10-25 09:36:29.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264719 has a single transcript. 2021-10-25 09:36:29.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264720: ['FBtr0334095'] 2021-10-25 09:36:29.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264720 has a single transcript. 2021-10-25 09:36:29.493 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264721: ['FBtr0334097'] 2021-10-25 09:36:29.493 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264721 has a single transcript. 2021-10-25 09:36:29.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264722: ['FBtr0334101'] 2021-10-25 09:36:29.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264722 has a single transcript. 2021-10-25 09:36:29.507 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264723: ['FBtr0344637'] 2021-10-25 09:36:29.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264723 has a single transcript. 2021-10-25 09:36:29.514 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264724: ['FBtr0334106'] 2021-10-25 09:36:29.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264724 has a single transcript. 2021-10-25 09:36:29.516 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9387890, 9389828), (9389977, 9390039), (9390136, 9390245)] 2021-10-25 09:36:29.517 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.517 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264725: ['FBtr0334108'] 2021-10-25 09:36:29.521 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264725 has a single transcript. 2021-10-25 09:36:29.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264726: ['FBtr0334107'] 2021-10-25 09:36:29.528 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264726 has a single transcript. 2021-10-25 09:36:29.536 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264727: ['FBtr0334112'] 2021-10-25 09:36:29.536 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264727 has a single transcript. 2021-10-25 09:36:29.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264738: ['FBtr0334115'] 2021-10-25 09:36:29.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264738 has a single transcript. 2021-10-25 09:36:29.548 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2152146, 2152232), (2152270, 2152662), (2152462, 2152662), (2152465, 2152662), (2152944, 2153002), (2153105, 2153281), (2153531, 2153595), (2154410, 2154472)] 2021-10-25 09:36:29.550 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264739: ['FBtr0334116'] 2021-10-25 09:36:29.550 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264739 has a single transcript. 2021-10-25 09:36:29.550 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.550 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264740: ['FBtr0339667', 'FBtr0339668', 'FBtr0346524'] 2021-10-25 09:36:29.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012037: ['FBtr0080552', 'FBtr0080553', 'FBtr0343667'] 2021-10-25 09:36:29.635 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23927934, 23927995), (23928553, 23928610), (23928779, 23928836)] 2021-10-25 09:36:29.636 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23928610, 23929000, 'FBtr0339668_exon_1') contains intron (23928779, 23928836) 2021-10-25 09:36:29.636 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339668_exon_1'] 2021-10-25 09:36:29.637 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13905718, 13906565), (13906504, 13906565), (13907172, 13907598), (13907962, 13908023), (13908590, 13908647), (13908788, 13908855), (13909028, 13909092)] 2021-10-25 09:36:29.676 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13906433, 13907172, 'FBtr0080553_exon_1') contains intron (13906504, 13906565) 2021-10-25 09:36:29.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080553_exon_1'] 2021-10-25 09:36:29.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.677 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031393: ['FBtr0077832'] 2021-10-25 09:36:29.678 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031393 has a single transcript. 2021-10-25 09:36:29.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031395: ['FBtr0077848', 'FBtr0077849', 'FBtr0308189', 'FBtr0330664'] 2021-10-25 09:36:29.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264741: ['FBtr0339665', 'FBtr0339666'] 2021-10-25 09:36:29.801 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2190643, 2190706), (2190646, 2190706), (2190784, 2191849), (2191078, 2191849), (2192090, 2192146)] 2021-10-25 09:36:29.803 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.806 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012042: ['FBtr0087437'] 2021-10-25 09:36:29.807 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0012042 has a single transcript. 2021-10-25 09:36:29.820 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23927934, 23927995), (23928553, 23928610), (23928779, 23928836)] 2021-10-25 09:36:29.821 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23927727, 23928553, 'FBtr0339665_exon_3') contains intron (23927934, 23927995) 2021-10-25 09:36:29.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012051: ['FBtr0086529', 'FBtr0086530', 'FBtr0340532', 'FBtr0112869'] 2021-10-25 09:36:29.822 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339665_exon_3'] 2021-10-25 09:36:29.822 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264742: ['FBtr0334119', 'FBtr0334120', 'FBtr0334121', 'FBtr0334122', 'FBtr0334123'] 2021-10-25 09:36:29.930 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19425146, 19426033), (19425238, 19426033), (19426218, 19426346), (19426218, 19426629), (19426391, 19426629), (19426806, 19426867), (19426944, 19427013), (19427138, 19427200), (19427321, 19427377), (19427618, 19427676), (19427907, 19427969), (19428362, 19428425), (19428544, 19429236), (19429279, 19429337), (19429479, 19429537), (19429765, 19429822), (19430152, 19430213)] 2021-10-25 09:36:29.932 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:29.933 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:29.967 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031397: ['FBtr0077845', 'FBtr0331649'] 2021-10-25 09:36:30.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2210869, 2210924), (2211510, 2211576), (2211717, 2211772), (2212091, 2212278)] 2021-10-25 09:36:30.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.028 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.040 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5043383, 5044306), (5043383, 5044582), (5043383, 5045821), (5044689, 5045821), (5045483, 5045821), (5045925, 5046146), (5047206, 5047272), (5047479, 5047542)] 2021-10-25 09:36:30.041 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.042 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031398: ['FBtr0077843', 'FBtr0330675'] 2021-10-25 09:36:30.117 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012058: ['FBtr0076890', 'FBtr0333369'] 2021-10-25 09:36:30.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2215456, 2215514), (2215459, 2215514)] 2021-10-25 09:36:30.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7248434, 7248503), (7248579, 7248657)] 2021-10-25 09:36:30.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031399: ['FBtr0077835'] 2021-10-25 09:36:30.221 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031399 has a single transcript. 2021-10-25 09:36:30.233 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031401: ['FBtr0077836', 'FBtr0077837', 'FBtr0077838', 'FBtr0077839'] 2021-10-25 09:36:30.248 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264743: ['FBtr0334124', 'FBtr0334125', 'FBtr0334126', 'FBtr0334127', 'FBtr0334128'] 2021-10-25 09:36:30.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0012344: ['FBtr0082080', 'FBtr0344343'] 2021-10-25 09:36:30.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9638211, 9643490), (9640868, 9643490), (9643698, 9647018), (9647141, 9648982), (9649723, 9649800)] 2021-10-25 09:36:30.309 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9648982, 9650706, 'FBtr0344343_exon_4') contains intron (9649723, 9649800) 2021-10-25 09:36:30.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344343_exon_4'] 2021-10-25 09:36:30.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2220951, 2223242), (2222298, 2223242), (2222770, 2223242), (2223633, 2223704), (2224526, 2224578), (2224685, 2224743), (2225357, 2225409)] 2021-10-25 09:36:30.345 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2224743, 2225544, 'FBtr0077836_exon_5') contains intron (2225357, 2225409) 2021-10-25 09:36:30.345 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2224743, 2225544, 'FBtr0077837_exon_5') contains intron (2225357, 2225409) 2021-10-25 09:36:30.346 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2224743, 2225544, 'FBtr0077838_exon_5') contains intron (2225357, 2225409) 2021-10-25 09:36:30.346 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077836_exon_5', 'FBtr0077837_exon_5', 'FBtr0077838_exon_5'] 2021-10-25 09:36:30.347 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5043383, 5044306), (5043383, 5044582), (5043383, 5045821), (5044689, 5045821), (5045483, 5045821), (5045925, 5046146), (5047206, 5047272), (5047479, 5047542)] 2021-10-25 09:36:30.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013263: ['FBtr0075705', 'FBtr0075706', 'FBtr0075708', 'FBtr0075707', 'FBtr0075704', 'FBtr0075703', 'FBtr0100444', 'FBtr0100445', 'FBtr0333045', 'FBtr0333046'] 2021-10-25 09:36:30.517 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031403: ['FBtr0113015'] 2021-10-25 09:36:30.517 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031403 has a single transcript. 2021-10-25 09:36:30.526 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031406: ['FBtr0077804'] 2021-10-25 09:36:30.526 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031406 has a single transcript. 2021-10-25 09:36:30.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031407: ['FBtr0077755', 'FBtr0077754'] 2021-10-25 09:36:30.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2263755, 2263815), (2264042, 2264096)] 2021-10-25 09:36:30.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264744: ['FBtr0334134'] 2021-10-25 09:36:30.606 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264744 has a single transcript. 2021-10-25 09:36:30.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264745: ['FBtr0339505'] 2021-10-25 09:36:30.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264745 has a single transcript. 2021-10-25 09:36:30.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264746: ['FBtr0344997', 'FBtr0344998'] 2021-10-25 09:36:30.663 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031409: ['FBtr0077756'] 2021-10-25 09:36:30.663 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031409 has a single transcript. 2021-10-25 09:36:30.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031410: ['FBtr0077801'] 2021-10-25 09:36:30.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031410 has a single transcript. 2021-10-25 09:36:30.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14749737, 14751266), (14751775, 14752698), (14751775, 14753333), (14751775, 14753210), (14753471, 14753630), (14753966, 14754084), (14754550, 14756903), (14757330, 14757662), (14757330, 14757841), (14757330, 14760563), (14757330, 14757483), (14757330, 14757907), (14760904, 14760966)] 2021-10-25 09:36:30.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18072576, 18072628), (18073185, 18073333)] 2021-10-25 09:36:30.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031412: ['FBtr0077758'] 2021-10-25 09:36:30.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031412 has a single transcript. 2021-10-25 09:36:30.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031413: ['FBtr0100648', 'FBtr0077799', 'FBtr0333226'] 2021-10-25 09:36:30.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264747: ['FBtr0334130', 'FBtr0334131'] 2021-10-25 09:36:30.766 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2309290, 2309515), (2309702, 2310125), (2310449, 2310661), (2310870, 2330655), (2310870, 2323350), (2323449, 2330655), (2323449, 2357077), (2330810, 2357077)] 2021-10-25 09:36:30.767 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18070595, 18070659), (18071222, 18071576)] 2021-10-25 09:36:30.808 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264748: ['FBtr0334132'] 2021-10-25 09:36:30.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264748 has a single transcript. 2021-10-25 09:36:30.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264750: ['FBtr0344447', 'FBtr0334143'] 2021-10-25 09:36:30.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031414: ['FBtr0344662', 'FBtr0344663'] 2021-10-25 09:36:30.945 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:30.946 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.947 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:30.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2312179, 2323382), (2324256, 2327403), (2327552, 2338379), (2338532, 2338764), (2341094, 2346826), (2347179, 2350758), (2351031, 2352443), (2352736, 2352801), (2353462, 2353537), (2353701, 2353768), (2354500, 2354579), (2354822, 2356430), (2356931, 2357689)] 2021-10-25 09:36:30.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:30.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264751: ['FBtr0334144', 'FBtr0334145'] 2021-10-25 09:36:31.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031417: ['FBtr0077792', 'FBtr0330667'] 2021-10-25 09:36:31.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18397503, 18399811), (18399950, 18400010)] 2021-10-25 09:36:31.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.085 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2370520, 2370611), (2370988, 2371041), (2370988, 2371047)] 2021-10-25 09:36:31.087 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.087 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.159 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031418: ['FBtr0077791', 'FBtr0303027', 'FBtr0331441'] 2021-10-25 09:36:31.160 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264753: ['FBtr0334282', 'FBtr0334283', 'FBtr0334284'] 2021-10-25 09:36:31.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013269: ['FBtr0083120'] 2021-10-25 09:36:31.185 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013269 has a single transcript. 2021-10-25 09:36:31.197 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013272: ['FBtr0071813', 'FBtr0071814', 'FBtr0071815', 'FBtr0071816', 'FBtr0342985', 'FBtr0342986'] 2021-10-25 09:36:31.240 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2372770, 2372829), (2373076, 2373133), (2373425, 2373493), (2373722, 2373935), (2373722, 2374488)] 2021-10-25 09:36:31.242 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.242 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.249 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19312714, 19312784), (19312925, 19312994), (19313130, 19314560), (19314753, 19315246), (19315338, 19317541), (19315338, 19316450), (19316498, 19317541), (19317636, 19318072), (19318339, 19318398), (19318500, 19319387), (19319686, 19325197), (19319686, 19325938), (19327405, 19327850), (19328059, 19328185), (19328318, 19328532), (19329161, 19330497), (19330711, 19346052), (19346219, 19349252), (19349911, 19356207)] 2021-10-25 09:36:31.252 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.252 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031419: ['FBtr0077764'] 2021-10-25 09:36:31.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031419 has a single transcript. 2021-10-25 09:36:31.367 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264775: ['FBtr0334150', 'FBtr0334151'] 2021-10-25 09:36:31.368 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22317737, 22317881), (22317776, 22317881), (22317954, 22325174), (22318627, 22325174), (22323025, 22325174), (22325727, 22325803), (22325727, 22325782), (22326337, 22326395), (22328130, 22328192)] 2021-10-25 09:36:31.370 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22317661, 22317954, 'FBtr0071815_exon_1') contains intron (22317737, 22317881) 2021-10-25 09:36:31.371 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071815_exon_1'] 2021-10-25 09:36:31.371 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.376 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031420: ['FBtr0077765', 'FBtr0077766', 'FBtr0331437', 'FBtr0331438'] 2021-10-25 09:36:31.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15509670, 15509752)] 2021-10-25 09:36:31.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.420 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2376143, 2377131), (2376263, 2377131), (2376672, 2377131), (2378275, 2378335)] 2021-10-25 09:36:31.483 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264776: ['FBtr0334152'] 2021-10-25 09:36:31.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264776 has a single transcript. 2021-10-25 09:36:31.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264785: ['FBtr0334274', 'FBtr0334275', 'FBtr0334276', 'FBtr0344333'] 2021-10-25 09:36:31.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5258121, 5266752), (5265202, 5266752), (5265637, 5266752), (5267032, 5267120), (5267201, 5267262), (5267402, 5267461), (5267877, 5269081)] 2021-10-25 09:36:31.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031422: ['FBtr0077768'] 2021-10-25 09:36:31.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031422 has a single transcript. 2021-10-25 09:36:31.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013275: ['FBtr0082512'] 2021-10-25 09:36:31.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013275 has a single transcript. 2021-10-25 09:36:31.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031423: ['FBtr0077790', 'FBtr0331439', 'FBtr0331440'] 2021-10-25 09:36:31.664 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013276: ['FBtr0082482'] 2021-10-25 09:36:31.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013276 has a single transcript. 2021-10-25 09:36:31.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013277: ['FBtr0082679'] 2021-10-25 09:36:31.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013277 has a single transcript. 2021-10-25 09:36:31.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013278: ['FBtr0082637'] 2021-10-25 09:36:31.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013278 has a single transcript. 2021-10-25 09:36:31.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013279: ['FBtr0082638'] 2021-10-25 09:36:31.688 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013279 has a single transcript. 2021-10-25 09:36:31.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013300: ['FBtr0080682', 'FBtr0345434'] 2021-10-25 09:36:31.744 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2385415, 2385506), (2385445, 2385506), (2385451, 2385506)] 2021-10-25 09:36:31.746 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.746 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.746 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14879188, 14879237), (14879639, 14881510)] 2021-10-25 09:36:31.747 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.747 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264786: ['FBtr0334321'] 2021-10-25 09:36:31.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264786 has a single transcript. 2021-10-25 09:36:31.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264787: ['FBtr0334323'] 2021-10-25 09:36:31.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264787 has a single transcript. 2021-10-25 09:36:31.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013301: ['FBtr0080681'] 2021-10-25 09:36:31.819 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013301 has a single transcript. 2021-10-25 09:36:31.822 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264788: ['FBtr0334324'] 2021-10-25 09:36:31.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264788 has a single transcript. 2021-10-25 09:36:31.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264789: ['FBtr0472591', 'FBtr0472592'] 2021-10-25 09:36:31.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013303: ['FBtr0074902'] 2021-10-25 09:36:31.830 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013303 has a single transcript. 2021-10-25 09:36:31.843 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013305: ['FBtr0089874', 'FBtr0089875', 'FBtr0089876', 'FBtr0089877', 'FBtr0089878', 'FBtr0089873', 'FBtr0309294', 'FBtr0309295', 'FBtr0332883'] 2021-10-25 09:36:31.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031424: ['FBtr0077769', 'FBtr0307078', 'FBtr0331202'] 2021-10-25 09:36:31.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5251181, 5251932), (5251788, 5251932)] 2021-10-25 09:36:31.883 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264790: ['FBtr0334330'] 2021-10-25 09:36:31.954 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264790 has a single transcript. 2021-10-25 09:36:31.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264791: ['FBtr0334338'] 2021-10-25 09:36:31.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264791 has a single transcript. 2021-10-25 09:36:31.966 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2392117, 2401106), (2400350, 2401106), (2400965, 2401106), (2401333, 2401889), (2402294, 2404726), (2405057, 2405501), (2405738, 2406206), (2406857, 2406910), (2407096, 2407159), (2407375, 2407470)] 2021-10-25 09:36:31.968 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:31.968 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:31.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264792: ['FBtr0334340'] 2021-10-25 09:36:31.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264792 has a single transcript. 2021-10-25 09:36:31.980 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264793: ['FBtr0334476'] 2021-10-25 09:36:31.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264793 has a single transcript. 2021-10-25 09:36:31.988 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264794: ['FBtr0334481'] 2021-10-25 09:36:31.988 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264794 has a single transcript. 2021-10-25 09:36:31.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264810: ['FBtr0080634'] 2021-10-25 09:36:31.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264810 has a single transcript. 2021-10-25 09:36:32.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264815: ['FBtr0334135', 'FBtr0334136', 'FBtr0334137', 'FBtr0334138', 'FBtr0334139', 'FBtr0334140', 'FBtr0334141', 'FBtr0334142', 'FBtr0344148'] 2021-10-25 09:36:32.088 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031426: ['FBtr0307079'] 2021-10-25 09:36:32.089 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031426 has a single transcript. 2021-10-25 09:36:32.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031428: ['FBtr0077770', 'FBtr0335462'] 2021-10-25 09:36:32.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12878014, 12878072), (12878321, 12878384), (12878710, 12879196), (12878710, 12879051), (12879146, 12879447), (12879146, 12879688), (12879146, 12879222), (12879222, 12879451), (12879222, 12879688), (12879222, 12879447), (12879222, 12880118)] 2021-10-25 09:36:32.108 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12878384, 12879222, 'FBtr0089878_exon_2') contains intron (12878710, 12879196) 2021-10-25 09:36:32.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089878_exon_2'] 2021-10-25 09:36:32.109 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.149 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2422029, 2422085)] 2021-10-25 09:36:32.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031430: ['FBtr0077781'] 2021-10-25 09:36:32.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031430 has a single transcript. 2021-10-25 09:36:32.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031431: ['FBtr0077750'] 2021-10-25 09:36:32.228 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031431 has a single transcript. 2021-10-25 09:36:32.236 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031432: ['FBtr0335166', 'FBtr0335167'] 2021-10-25 09:36:32.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11816706, 11817352), (11818493, 11818599), (11818849, 11830276), (11818849, 11833259), (11818849, 11821006), (11818849, 11832724), (11830831, 11833259), (11830831, 11832724), (11832787, 11833259), (11833373, 11835089), (11835651, 11838482), (11838773, 11877096), (11838773, 11911685), (11838773, 11858890), (11838773, 11896210), (11859560, 11874256), (11911708, 11925541), (11925715, 11928542), (11925728, 11928542)] 2021-10-25 09:36:32.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2563065, 2563132), (2563396, 2563503), (2563627, 2563699), (2564119, 2564170), (2564522, 2564576)] 2021-10-25 09:36:32.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.357 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031434: ['FBtr0077746', 'FBtr0344854'] 2021-10-25 09:36:32.405 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2576572, 2576636)] 2021-10-25 09:36:32.407 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.407 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031435: ['FBtr0077693'] 2021-10-25 09:36:32.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031435 has a single transcript. 2021-10-25 09:36:32.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031436: ['FBtr0335174', 'FBtr0077745', 'FBtr0273393'] 2021-10-25 09:36:32.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013307: ['FBtr0088863'] 2021-10-25 09:36:32.538 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013307 has a single transcript. 2021-10-25 09:36:32.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013308: ['FBtr0088864'] 2021-10-25 09:36:32.547 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013308 has a single transcript. 2021-10-25 09:36:32.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013323: ['FBtr0346726', 'FBtr0333746', 'FBtr0346650'] 2021-10-25 09:36:32.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2579426, 2579482), (2579567, 2579618), (2579796, 2579859), (2579955, 2580014), (2580070, 2580139)] 2021-10-25 09:36:32.572 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2579859, 2580070, 'FBtr0335174_exon_2') contains intron (2579955, 2580014) 2021-10-25 09:36:32.573 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2579859, 2580047, 'FBtr0077745_exon_1') contains intron (2579955, 2580014) 2021-10-25 09:36:32.573 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335174_exon_2', 'FBtr0077745_exon_1'] 2021-10-25 09:36:32.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.632 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(576022, 576080), (576404, 576513)] 2021-10-25 09:36:32.633 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (576080, 576550, 'FBtr0346726_exon_1') contains intron (576404, 576513) 2021-10-25 09:36:32.634 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0346726_exon_1'] 2021-10-25 09:36:32.634 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031437: ['FBtr0077694', 'FBtr0335170'] 2021-10-25 09:36:32.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264816: ['FBtr0334146', 'FBtr0334147', 'FBtr0334148', 'FBtr0334149'] 2021-10-25 09:36:32.755 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2580581, 2580643)] 2021-10-25 09:36:32.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.766 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013325: ['FBtr0086533', 'FBtr0340533'] 2021-10-25 09:36:32.815 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19442377, 19442442), (19442489, 19442617), (19442740, 19442800), (19443098, 19443312)] 2021-10-25 09:36:32.817 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.817 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031440: ['FBtr0114513'] 2021-10-25 09:36:32.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031440 has a single transcript. 2021-10-25 09:36:32.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031441: ['FBtr0077743'] 2021-10-25 09:36:32.838 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031441 has a single transcript. 2021-10-25 09:36:32.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18403066, 18403519), (18403318, 18403519), (18403388, 18403519), (18403622, 18403688), (18403833, 18403893)] 2021-10-25 09:36:32.839 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18403321, 18403622, 'FBtr0334146_exon_1') contains intron (18403388, 18403519) 2021-10-25 09:36:32.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334146_exon_1'] 2021-10-25 09:36:32.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031442: ['FBtr0077697'] 2021-10-25 09:36:32.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031442 has a single transcript. 2021-10-25 09:36:32.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031443: ['FBtr0077699', 'FBtr0332513'] 2021-10-25 09:36:32.905 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2655556, 2655618)] 2021-10-25 09:36:32.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013334: ['FBtr0083204', 'FBtr0083205', 'FBtr0083206', 'FBtr0083207', 'FBtr0083208', 'FBtr0083209', 'FBtr0083210', 'FBtr0301655', 'FBtr0344384', 'FBtr0310672'] 2021-10-25 09:36:32.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:32.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:32.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031444: ['FBtr0077700'] 2021-10-25 09:36:32.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031444 has a single transcript. 2021-10-25 09:36:32.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031446: ['FBtr0300986'] 2021-10-25 09:36:32.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031446 has a single transcript. 2021-10-25 09:36:33.008 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031449: ['FBtr0077706', 'FBtr0077705', 'FBtr0077707', 'FBtr0077708', 'FBtr0334158', 'FBtr0334159', 'FBtr0334160', 'FBtr0334161'] 2021-10-25 09:36:33.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264817: ['FBtr0347596', 'FBtr0347597'] 2021-10-25 09:36:33.068 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10484824, 10485216)] 2021-10-25 09:36:33.070 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10481893, 10485252, 'FBtr0347597_exon_1') contains intron (10484824, 10485216) 2021-10-25 09:36:33.070 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347597_exon_1'] 2021-10-25 09:36:33.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264818: ['FBtr0334466'] 2021-10-25 09:36:33.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264818 has a single transcript. 2021-10-25 09:36:33.155 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264819: ['FBtr0334480'] 2021-10-25 09:36:33.155 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264819 has a single transcript. 2021-10-25 09:36:33.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264820: ['FBtr0334478'] 2021-10-25 09:36:33.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264820 has a single transcript. 2021-10-25 09:36:33.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264821: ['FBtr0344970', 'FBtr0334490'] 2021-10-25 09:36:33.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15935584, 15935976), (15935584, 15935952), (15935584, 15935830), (15935912, 15935976), (15936340, 15944948), (15936340, 15951601), (15944996, 15951601), (15951841, 15954157), (15951850, 15954157), (15954234, 15954582), (15954255, 15954582), (15954683, 15954746), (15955021, 15955086), (15955205, 15955989), (15955205, 15956864), (15955205, 15957590), (15956307, 15959319), (15957919, 15958933), (15957919, 15959319), (15959025, 15959319), (15959548, 15959741)] 2021-10-25 09:36:33.208 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935118, 15936340, 'FBtr0083204_exon_1') contains intron (15935584, 15935976) 2021-10-25 09:36:33.208 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083204_exon_9') contains intron (15959548, 15959741) 2021-10-25 09:36:33.209 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935118, 15936340, 'FBtr0083205_exon_1') contains intron (15935584, 15935976) 2021-10-25 09:36:33.209 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083205_exon_9') contains intron (15959548, 15959741) 2021-10-25 09:36:33.210 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083206_exon_10') contains intron (15959548, 15959741) 2021-10-25 09:36:33.210 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935118, 15935912, 'FBtr0083207_exon_1') contains intron (15935584, 15935830) 2021-10-25 09:36:33.211 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083207_exon_10') contains intron (15959548, 15959741) 2021-10-25 09:36:33.211 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935830, 15936340, 'FBtr0083208_exon_2') contains intron (15935912, 15935976) 2021-10-25 09:36:33.212 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083208_exon_10') contains intron (15959548, 15959741) 2021-10-25 09:36:33.212 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935118, 15936340, 'FBtr0083209_exon_1') contains intron (15935584, 15935976) 2021-10-25 09:36:33.213 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083209_exon_8') contains intron (15959548, 15959741) 2021-10-25 09:36:33.213 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0083210_exon_9') contains intron (15959548, 15959741) 2021-10-25 09:36:33.214 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935099, 15936340, 'FBtr0301655_exon_1') contains intron (15935584, 15935976) 2021-10-25 09:36:33.214 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0301655_exon_8') contains intron (15959548, 15959741) 2021-10-25 09:36:33.215 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15935099, 15936340, 'FBtr0344384_exon_1') contains intron (15935584, 15935976) 2021-10-25 09:36:33.216 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15959319, 15962124, 'FBtr0344384_exon_9') contains intron (15959548, 15959741) 2021-10-25 09:36:33.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083204_exon_1', 'FBtr0083204_exon_9', 'FBtr0083205_exon_1', 'FBtr0083205_exon_9', 'FBtr0083206_exon_10', 'FBtr0083207_exon_1', 'FBtr0083207_exon_10', 'FBtr0083208_exon_2', 'FBtr0083208_exon_10', 'FBtr0083209_exon_1', 'FBtr0083209_exon_8', 'FBtr0083210_exon_9', 'FBtr0301655_exon_1', 'FBtr0301655_exon_8', 'FBtr0344384_exon_1', 'FBtr0344384_exon_9'] 2021-10-25 09:36:33.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.219 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:33.220 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.220 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.244 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2725738, 2726226), (2726335, 2737031), (2730372, 2736173), (2730372, 2736310), (2730469, 2736173), (2730469, 2736129), (2730892, 2736173), (2736136, 2736310), (2736430, 2737031), (2737321, 2737421), (2737567, 2737661), (2737900, 2738074), (2738382, 2738446), (2738615, 2738682), (2738783, 2738868), (2739024, 2739088), (2739297, 2739361)] 2021-10-25 09:36:33.246 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2736129, 2736430, 'FBtr0077706_exon_2') contains intron (2736136, 2736310) 2021-10-25 09:36:33.248 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2735813, 2736430, 'FBtr0334158_exon_1') contains intron (2736136, 2736310) 2021-10-25 09:36:33.249 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077706_exon_2', 'FBtr0334158_exon_1'] 2021-10-25 09:36:33.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.302 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264822: ['FBtr0344192', 'FBtr0334620', 'FBtr0334621'] 2021-10-25 09:36:33.386 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(959846, 962403), (960038, 962250), (962347, 962403), (962347, 962400)] 2021-10-25 09:36:33.387 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.387 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264823: ['FBtr0334623', 'FBtr0334624'] 2021-10-25 09:36:33.555 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1027882, 1028709), (1028328, 1028709)] 2021-10-25 09:36:33.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.557 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264824: ['FBtr0344588'] 2021-10-25 09:36:33.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264824 has a single transcript. 2021-10-25 09:36:33.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264825: ['FBtr0334665'] 2021-10-25 09:36:33.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264825 has a single transcript. 2021-10-25 09:36:33.646 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264826: ['FBtr0334679', 'FBtr0334680'] 2021-10-25 09:36:33.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031450: ['FBtr0089750', 'FBtr0089751', 'FBtr0089749'] 2021-10-25 09:36:33.695 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21615563, 21615666)] 2021-10-25 09:36:33.697 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21615019, 21615740, 'FBtr0334679_exon_1') contains intron (21615563, 21615666) 2021-10-25 09:36:33.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334679_exon_1'] 2021-10-25 09:36:33.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013342: ['FBtr0072819', 'FBtr0072815', 'FBtr0300893', 'FBtr0300894', 'FBtr0302310', 'FBtr0306578', 'FBtr0331461', 'FBtr0331462'] 2021-10-25 09:36:33.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2740034, 2740139), (2740211, 2740388), (2740473, 2740519), (2740784, 2741107), (2741051, 2741107), (2741482, 2741558)] 2021-10-25 09:36:33.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.753 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264827: ['FBtr0334683'] 2021-10-25 09:36:33.775 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264827 has a single transcript. 2021-10-25 09:36:33.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264828: ['FBtr0334690'] 2021-10-25 09:36:33.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264828 has a single transcript. 2021-10-25 09:36:33.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264829: ['FBtr0334691'] 2021-10-25 09:36:33.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264829 has a single transcript. 2021-10-25 09:36:33.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264830: ['FBtr0334692'] 2021-10-25 09:36:33.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264830 has a single transcript. 2021-10-25 09:36:33.811 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264831: ['FBtr0334693'] 2021-10-25 09:36:33.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264831 has a single transcript. 2021-10-25 09:36:33.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264832: ['FBtr0334694'] 2021-10-25 09:36:33.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264832 has a single transcript. 2021-10-25 09:36:33.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264833: ['FBtr0334697'] 2021-10-25 09:36:33.826 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264833 has a single transcript. 2021-10-25 09:36:33.834 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264834: ['FBtr0334738'] 2021-10-25 09:36:33.834 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264834 has a single transcript. 2021-10-25 09:36:33.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264835: ['FBtr0334737'] 2021-10-25 09:36:33.842 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264835 has a single transcript. 2021-10-25 09:36:33.848 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264836: ['FBtr0334698'] 2021-10-25 09:36:33.848 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264836 has a single transcript. 2021-10-25 09:36:33.855 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264837: ['FBtr0334704'] 2021-10-25 09:36:33.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264837 has a single transcript. 2021-10-25 09:36:33.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264838: ['FBtr0334708', 'FBtr0334709'] 2021-10-25 09:36:33.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031451: ['FBtr0077740', 'FBtr0330719'] 2021-10-25 09:36:33.915 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30049436, 30051643), (30049436, 30049497), (30049827, 30051643)] 2021-10-25 09:36:33.916 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.939 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2744537, 2744603), (2744537, 2744614), (2744712, 2744766)] 2021-10-25 09:36:33.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.941 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1632454, 1634504), (1632454, 1633057), (1632454, 1635185), (1632454, 1633708), (1633505, 1633708), (1633505, 1635185), (1633806, 1635185), (1634907, 1635185), (1635237, 1635300), (1635459, 1635533), (1635684, 1636817), (1635684, 1635936), (1636009, 1636817), (1637269, 1637722), (1637269, 1637632), (1637269, 1637558), (1637272, 1637722)] 2021-10-25 09:36:33.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:33.955 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:33.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264839: ['FBtr0334721', 'FBtr0334722'] 2021-10-25 09:36:34.010 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031452: ['FBtr0077712'] 2021-10-25 09:36:34.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031452 has a single transcript. 2021-10-25 09:36:34.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031453: ['FBtr0077713', 'FBtr0077714', 'FBtr0307080', 'FBtr0335125'] 2021-10-25 09:36:34.039 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20827338, 20827925), (20827338, 20827402)] 2021-10-25 09:36:34.040 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.040 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264840: ['FBtr0334726'] 2021-10-25 09:36:34.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264840 has a single transcript. 2021-10-25 09:36:34.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264841: ['FBtr0334727'] 2021-10-25 09:36:34.128 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264841 has a single transcript. 2021-10-25 09:36:34.131 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2752837, 2753371), (2752840, 2753371), (2753660, 2756007), (2756170, 2756244)] 2021-10-25 09:36:34.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.133 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.135 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264842: ['FBtr0334744'] 2021-10-25 09:36:34.136 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264842 has a single transcript. 2021-10-25 09:36:34.143 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264843: ['FBtr0334745'] 2021-10-25 09:36:34.143 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264843 has a single transcript. 2021-10-25 09:36:34.150 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264844: ['FBtr0334771'] 2021-10-25 09:36:34.150 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264844 has a single transcript. 2021-10-25 09:36:34.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264845: ['FBtr0331331'] 2021-10-25 09:36:34.157 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264845 has a single transcript. 2021-10-25 09:36:34.164 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264848: ['FBtr0075958'] 2021-10-25 09:36:34.165 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264848 has a single transcript. 2021-10-25 09:36:34.172 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264855: ['FBtr0089488', 'FBtr0089489'] 2021-10-25 09:36:34.232 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(409465, 409531), (409736, 409789), (410073, 410126), (411060, 411128), (411718, 411781), (412237, 412446), (412658, 413395), (412658, 412724), (413654, 414442)] 2021-10-25 09:36:34.233 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.234 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264857: ['FBtr0306339', 'FBtr0309897', 'FBtr0306338', 'FBtr0306340', 'FBtr0336887', 'FBtr0336888', 'FBtr0336889', 'FBtr0336890', 'FBtr0336891', 'FBtr0336892', 'FBtr0336893', 'FBtr0336894'] 2021-10-25 09:36:34.323 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031454: ['FBtr0100383'] 2021-10-25 09:36:34.324 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031454 has a single transcript. 2021-10-25 09:36:34.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031455: ['FBtr0077737'] 2021-10-25 09:36:34.334 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031455 has a single transcript. 2021-10-25 09:36:34.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031456: ['FBtr0077715', 'FBtr0335126'] 2021-10-25 09:36:34.361 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013343: ['FBtr0084588', 'FBtr0392904', 'FBtr0303161'] 2021-10-25 09:36:34.394 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2760146, 2760216), (2761308, 2761503), (2761670, 2761723), (2763088, 2763150)] 2021-10-25 09:36:34.395 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.396 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.438 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24102046, 24103571)] 2021-10-25 09:36:34.440 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24101599, 24105763, 'FBtr0392904_exon_1') contains intron (24102046, 24103571) 2021-10-25 09:36:34.440 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0392904_exon_1'] 2021-10-25 09:36:34.441 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031457: ['FBtr0077736', 'FBtr0335129'] 2021-10-25 09:36:34.536 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2764441, 2764504), (2765198, 2765283), (2765427, 2765504), (2765427, 2765495)] 2021-10-25 09:36:34.538 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.538 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.574 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013347: ['FBtr0084526'] 2021-10-25 09:36:34.575 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013347 has a single transcript. 2021-10-25 09:36:34.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013348: ['FBtr0086102', 'FBtr0310003'] 2021-10-25 09:36:34.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031458: ['FBtr0077716', 'FBtr0335127'] 2021-10-25 09:36:34.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5066463, 5066527), (5066923, 5066976), (5067004, 5069981)] 2021-10-25 09:36:34.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.643 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.781 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2766707, 2766766)] 2021-10-25 09:36:34.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.783 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.812 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16832472, 16833767), (16833790, 16846420), (16834497, 16846420), (16845298, 16846420), (16846530, 16848481), (16846530, 16859110), (16856158, 16859110), (16859148, 16874308), (16859148, 16874216), (16874314, 16890071), (16890127, 16891848), (16890127, 16899622), (16890127, 16896150), (16900084, 16922442)] 2021-10-25 09:36:34.816 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.816 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013432: ['FBtr0070431'] 2021-10-25 09:36:34.821 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013432 has a single transcript. 2021-10-25 09:36:34.832 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013433: ['FBtr0080806', 'FBtr0343728'] 2021-10-25 09:36:34.860 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031459: ['FBtr0077718', 'FBtr0077719', 'FBtr0335128'] 2021-10-25 09:36:34.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16050710, 16056251), (16056338, 16075097), (16075306, 16076669), (16076805, 16078155), (16078289, 16079813), (16079936, 16080000), (16080196, 16080475), (16080196, 16080445)] 2021-10-25 09:36:34.886 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.946 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2770191, 2770258), (2770400, 2770459)] 2021-10-25 09:36:34.948 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:34.948 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:34.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013435: ['FBtr0088429'] 2021-10-25 09:36:34.970 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013435 has a single transcript. 2021-10-25 09:36:34.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013467: ['FBtr0087361', 'FBtr0087362', 'FBtr0332267'] 2021-10-25 09:36:35.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15156215, 15163885), (15156215, 15180512), (15164026, 15164581), (15164639, 15180512), (15165100, 15180512), (15180710, 15188755)] 2021-10-25 09:36:35.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.067 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031460: ['FBtr0077730'] 2021-10-25 09:36:35.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.068 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031460 has a single transcript. 2021-10-25 09:36:35.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031461: ['FBtr0077720', 'FBtr0077721', 'FBtr0335151'] 2021-10-25 09:36:35.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2805601, 2808979), (2808536, 2808979), (2810253, 2810367), (2810643, 2811148), (2811528, 2811597)] 2021-10-25 09:36:35.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.195 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013469: ['FBtr0076247', 'FBtr0330080', 'FBtr0333361', 'FBtr0345346'] 2021-10-25 09:36:35.304 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10985072, 10996226), (10996277, 11008349)] 2021-10-25 09:36:35.306 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.306 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031462: ['FBtr0077722'] 2021-10-25 09:36:35.311 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031462 has a single transcript. 2021-10-25 09:36:35.318 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031463: ['FBtr0113017'] 2021-10-25 09:36:35.319 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031463 has a single transcript. 2021-10-25 09:36:35.325 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031465: ['FBtr0077723'] 2021-10-25 09:36:35.325 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031465 has a single transcript. 2021-10-25 09:36:35.325 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0076247': ['FBtr0330080']} 2021-10-25 09:36:35.326 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330080']] 2021-10-25 09:36:35.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031466: ['FBtr0077691', 'FBtr0077692'] 2021-10-25 09:36:35.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2835200, 2835254), (2835551, 2837192), (2836178, 2837192), (2837286, 2837345)] 2021-10-25 09:36:35.388 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264862: ['FBtr0334775'] 2021-10-25 09:36:35.448 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264862 has a single transcript. 2021-10-25 09:36:35.452 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013531: ['FBtr0079544', 'FBtr0329946'] 2021-10-25 09:36:35.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264863: ['FBtr0334776'] 2021-10-25 09:36:35.457 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264863 has a single transcript. 2021-10-25 09:36:35.463 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031467: ['FBtr0077618'] 2021-10-25 09:36:35.464 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264864: ['FBtr0334780'] 2021-10-25 09:36:35.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031467 has a single transcript. 2021-10-25 09:36:35.464 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264864 has a single transcript. 2021-10-25 09:36:35.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264865: ['FBtr0334784', 'FBtr0334785'] 2021-10-25 09:36:35.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031468: ['FBtr0077619'] 2021-10-25 09:36:35.473 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031468 has a single transcript. 2021-10-25 09:36:35.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031469: ['FBtr0273251'] 2021-10-25 09:36:35.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031469 has a single transcript. 2021-10-25 09:36:35.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031470: ['FBtr0077689'] 2021-10-25 09:36:35.487 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031470 has a single transcript. 2021-10-25 09:36:35.494 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031471: ['FBtr0300356'] 2021-10-25 09:36:35.494 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031471 has a single transcript. 2021-10-25 09:36:35.500 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031472: ['FBtr0335130'] 2021-10-25 09:36:35.500 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031472 has a single transcript. 2021-10-25 09:36:35.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031473: ['FBtr0077686', 'FBtr0077687', 'FBtr0335132'] 2021-10-25 09:36:35.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:35.513 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.524 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21106995, 21107060)] 2021-10-25 09:36:35.525 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21106804, 21107306, 'FBtr0334785_exon_1') contains intron (21106995, 21107060) 2021-10-25 09:36:35.525 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334785_exon_1'] 2021-10-25 09:36:35.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.528 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0079544': ['FBtr0329946']} 2021-10-25 09:36:35.529 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329946']] 2021-10-25 09:36:35.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013548: ['FBtr0072085'] 2021-10-25 09:36:35.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013548 has a single transcript. 2021-10-25 09:36:35.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013563: ['FBtr0075777'] 2021-10-25 09:36:35.546 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013563 has a single transcript. 2021-10-25 09:36:35.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013576: ['FBtr0110932', 'FBtr0110933', 'FBtr0100199', 'FBtr0100197', 'FBtr0078818', 'FBtr0078810', 'FBtr0078811', 'FBtr0078815', 'FBtr0078814', 'FBtr0078812', 'FBtr0078813', 'FBtr0078816', 'FBtr0078817', 'FBtr0273430', 'FBtr0273431', 'FBtr0273432', 'FBtr0273433', 'FBtr0273434', 'FBtr0306694', 'FBtr0306695', 'FBtr0308580', 'FBtr0308581', 'FBtr0333695'] 2021-10-25 09:36:35.592 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2850277, 2850334), (2850631, 2852146), (2852257, 2853250), (2853605, 2855617), (2853605, 2854723), (2853605, 2855185)] 2021-10-25 09:36:35.593 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.594 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264866: ['FBtr0334786'] 2021-10-25 09:36:35.596 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264866 has a single transcript. 2021-10-25 09:36:35.606 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264867: ['FBtr0342950', 'FBtr0334788'] 2021-10-25 09:36:35.659 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4241681, 4241822)] 2021-10-25 09:36:35.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031474: ['FBtr0077626', 'FBtr0077625', 'FBtr0077627'] 2021-10-25 09:36:35.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264868: ['FBtr0334789'] 2021-10-25 09:36:35.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264868 has a single transcript. 2021-10-25 09:36:35.751 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264869: ['FBtr0334793'] 2021-10-25 09:36:35.752 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264869 has a single transcript. 2021-10-25 09:36:35.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264870: ['FBtr0334798'] 2021-10-25 09:36:35.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264870 has a single transcript. 2021-10-25 09:36:35.768 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264871: ['FBtr0334815'] 2021-10-25 09:36:35.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264871 has a single transcript. 2021-10-25 09:36:35.776 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264872: ['FBtr0334816'] 2021-10-25 09:36:35.776 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264872 has a single transcript. 2021-10-25 09:36:35.783 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264873: ['FBtr0334819'] 2021-10-25 09:36:35.783 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264873 has a single transcript. 2021-10-25 09:36:35.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264874: ['FBtr0334811'] 2021-10-25 09:36:35.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264874 has a single transcript. 2021-10-25 09:36:35.793 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2857576, 2859624), (2857576, 2864968), (2859714, 2864968), (2862840, 2864968), (2865418, 2865481), (2865577, 2866331), (2866741, 2866813), (2867230, 2867336)] 2021-10-25 09:36:35.795 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.795 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264875: ['FBtr0334812'] 2021-10-25 09:36:35.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264875 has a single transcript. 2021-10-25 09:36:35.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264876: ['FBtr0334803'] 2021-10-25 09:36:35.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264876 has a single transcript. 2021-10-25 09:36:35.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264877: ['FBtr0334804', 'FBtr0334805'] 2021-10-25 09:36:35.866 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8157229, 8157284), (8157717, 8157766), (8157717, 8157759)] 2021-10-25 09:36:35.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:35.867 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:35.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031476: ['FBtr0077628'] 2021-10-25 09:36:35.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031476 has a single transcript. 2021-10-25 09:36:35.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031478: ['FBtr0077629'] 2021-10-25 09:36:35.931 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031478 has a single transcript. 2021-10-25 09:36:35.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031479: ['FBtr0077684'] 2021-10-25 09:36:35.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031479 has a single transcript. 2021-10-25 09:36:35.938 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264878: ['FBtr0334806'] 2021-10-25 09:36:35.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264878 has a single transcript. 2021-10-25 09:36:35.945 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031483: ['FBtr0077676', 'FBtr0077677'] 2021-10-25 09:36:35.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264879: ['FBtr0334809'] 2021-10-25 09:36:35.947 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264879 has a single transcript. 2021-10-25 09:36:35.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264880: ['FBtr0334802'] 2021-10-25 09:36:35.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264880 has a single transcript. 2021-10-25 09:36:35.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264882: ['FBtr0334828'] 2021-10-25 09:36:35.962 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264882 has a single transcript. 2021-10-25 09:36:35.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264883: ['FBtr0334827'] 2021-10-25 09:36:35.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264883 has a single transcript. 2021-10-25 09:36:35.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264884: ['FBtr0334825'] 2021-10-25 09:36:35.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264884 has a single transcript. 2021-10-25 09:36:35.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264885: ['FBtr0334830'] 2021-10-25 09:36:35.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264885 has a single transcript. 2021-10-25 09:36:35.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264886: ['FBtr0334831'] 2021-10-25 09:36:35.993 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264886 has a single transcript. 2021-10-25 09:36:36.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264887: ['FBtr0334834'] 2021-10-25 09:36:36.005 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264887 has a single transcript. 2021-10-25 09:36:36.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264888: ['FBtr0334837'] 2021-10-25 09:36:36.012 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264888 has a single transcript. 2021-10-25 09:36:36.012 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2975079, 2975150), (2976554, 2976818)] 2021-10-25 09:36:36.013 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2975150, 2976862, 'FBtr0077676_exon_1') contains intron (2976554, 2976818) 2021-10-25 09:36:36.014 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077676_exon_1'] 2021-10-25 09:36:36.014 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264889: ['FBtr0334839'] 2021-10-25 09:36:36.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264889 has a single transcript. 2021-10-25 09:36:36.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264890: ['FBtr0334840'] 2021-10-25 09:36:36.026 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264890 has a single transcript. 2021-10-25 09:36:36.033 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264891: ['FBtr0334845'] 2021-10-25 09:36:36.033 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264891 has a single transcript. 2021-10-25 09:36:36.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264892: ['FBtr0334864'] 2021-10-25 09:36:36.041 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264892 has a single transcript. 2021-10-25 09:36:36.047 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264893: ['FBtr0334882'] 2021-10-25 09:36:36.048 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264893 has a single transcript. 2021-10-25 09:36:36.068 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264894: ['FBtr0334851', 'FBtr0334852', 'FBtr0334853', 'FBtr0334854', 'FBtr0334855', 'FBtr0334856', 'FBtr0334857', 'FBtr0334858', 'FBtr0334859', 'FBtr0334860', 'FBtr0334861', 'FBtr0334862', 'FBtr0334863'] 2021-10-25 09:36:36.096 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031484: ['FBtr0077642', 'FBtr0343781'] 2021-10-25 09:36:36.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2977530, 2977586)] 2021-10-25 09:36:36.151 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:36.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.229 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031485: ['FBtr0077675', 'FBtr0343783'] 2021-10-25 09:36:36.252 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5274082, 5274148), (5274318, 5274734), (5274894, 5274965), (5275087, 5286901), (5275087, 5292639), (5275087, 5291989), (5275087, 5281015), (5275087, 5279608), (5275087, 5278067), (5275087, 5282664), (5278279, 5281015), (5292079, 5292639), (5292841, 5292997), (5293160, 5293218), (5293370, 5294061), (5293370, 5293629), (5293761, 5294061), (5294234, 5294305), (5294855, 5295640), (5294879, 5295640), (5295795, 5295856), (5295963, 5296146), (5295963, 5296164), (5296635, 5299469), (5296635, 5297312), (5296635, 5298201), (5298489, 5298561), (5298489, 5299469), (5299573, 5334404), (5299573, 5350239), (5299573, 5304110), (5299573, 5312988), (5304182, 5305710), (5304182, 5312988), (5305847, 5305903), (5305853, 5307943), (5305970, 5307934), (5305970, 5307433), (5307777, 5307934), (5313497, 5313937), (5314305, 5322987), (5323125, 5323738), (5323125, 5323664), (5323125, 5323438), (5323125, 5323691), (5334698, 5335713), (5335060, 5349986), (5335060, 5349467), (5335060, 5335713), (5336635, 5349467)] 2021-10-25 09:36:36.266 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:36.266 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.286 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:36.287 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:36.288 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031488: ['FBtr0077646'] 2021-10-25 09:36:36.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031488 has a single transcript. 2021-10-25 09:36:36.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031489: ['FBtr0077671', 'FBtr0077672', 'FBtr0300815', 'FBtr0331629'] 2021-10-25 09:36:36.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13261177, 13271295), (13261177, 13261500), (13261692, 13271295), (13261692, 13267594), (13266988, 13267594), (13266996, 13267594), (13267231, 13267594), (13267972, 13271295), (13271627, 13272233), (13271972, 13272233), (13273048, 13273618), (13274116, 13274309), (13274376, 13274642), (13274376, 13274651), (13274376, 13276246), (13274376, 13274690), (13274850, 13274989), (13274850, 13275587), (13274850, 13276246), (13275061, 13275587), (13275838, 13276246), (13275865, 13276246), (13276291, 13276377), (13276512, 13283360), (13276512, 13277043), (13282336, 13283360)] 2021-10-25 09:36:36.454 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13261007, 13261692, 'FBtr0334854_exon_1') contains intron (13261177, 13261500) 2021-10-25 09:36:36.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334854_exon_1'] 2021-10-25 09:36:36.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3016865, 3016925), (3017119, 3017178), (3017320, 3017383), (3017725, 3017779), (3017903, 3017958), (3018024, 3018163), (3018024, 3018081), (3018081, 3018163)] 2021-10-25 09:36:36.484 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3018081, 3018308, 'FBtr0077671_exon_1') contains intron (3018081, 3018163) 2021-10-25 09:36:36.485 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3017958, 3018081, 'FBtr0077672_exon_2') contains intron (3018024, 3018081) 2021-10-25 09:36:36.485 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3017958, 3018093, 'FBtr0331629_exon_1') contains intron (3018024, 3018081) 2021-10-25 09:36:36.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077671_exon_1', 'FBtr0077672_exon_2', 'FBtr0331629_exon_1'] 2021-10-25 09:36:36.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031490: ['FBtr0077647', 'FBtr0331628'] 2021-10-25 09:36:36.718 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3018624, 3018726), (3019403, 3019509), (3019929, 3019986)] 2021-10-25 09:36:36.720 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:36.720 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.793 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031491: ['FBtr0077670'] 2021-10-25 09:36:36.793 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031491 has a single transcript. 2021-10-25 09:36:36.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031492: ['FBtr0077648'] 2021-10-25 09:36:36.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031492 has a single transcript. 2021-10-25 09:36:36.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031493: ['FBtr0077669', 'FBtr0335484'] 2021-10-25 09:36:36.866 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3026974, 3027037), (3027282, 3027338), (3028308, 3028365), (3029006, 3029063)] 2021-10-25 09:36:36.867 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:36.868 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:36.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031494: ['FBtr0077650'] 2021-10-25 09:36:36.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031494 has a single transcript. 2021-10-25 09:36:36.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031495: ['FBtr0077651', 'FBtr0077652', 'FBtr0344734', 'FBtr0344735'] 2021-10-25 09:36:37.065 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3030575, 3030775), (3030575, 3030669), (3030947, 3030999), (3031893, 3031953)] 2021-10-25 09:36:37.067 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3030538, 3030947, 'FBtr0077652_exon_1') contains intron (3030575, 3030775) 2021-10-25 09:36:37.067 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3030538, 3031893, 'FBtr0344734_exon_1') contains intron (3030575, 3030775) 2021-10-25 09:36:37.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077652_exon_1', 'FBtr0344734_exon_1'] 2021-10-25 09:36:37.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264895: ['FBtr0334846', 'FBtr0334847', 'FBtr0334848', 'FBtr0334849', 'FBtr0334850'] 2021-10-25 09:36:37.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031496: ['FBtr0300814', 'FBtr0335481', 'FBtr0335482'] 2021-10-25 09:36:37.289 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7499180, 7499265), (7499754, 7499812), (7501525, 7529201), (7501525, 7536274), (7536473, 7543982), (7536473, 7578236), (7536473, 7568573), (7568978, 7575733), (7568978, 7576244)] 2021-10-25 09:36:37.292 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.292 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.349 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3032486, 3032550), (3032834, 3032894), (3033131, 3033182), (3033573, 3033631), (3034968, 3035020), (3034971, 3035020), (3034977, 3035020)] 2021-10-25 09:36:37.351 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.351 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031497: ['FBtr0077667', 'FBtr0335480'] 2021-10-25 09:36:37.534 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264896: ['FBtr0334878'] 2021-10-25 09:36:37.535 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264896 has a single transcript. 2021-10-25 09:36:37.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:37.540 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013672: ['FBtr0433498'] 2021-10-25 09:36:37.540 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013672 has a single transcript. 2021-10-25 09:36:37.543 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264897: ['FBtr0334905'] 2021-10-25 09:36:37.543 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264897 has a single transcript. 2021-10-25 09:36:37.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013673: ['FBtr0100866'] 2021-10-25 09:36:37.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013673 has a single transcript. 2021-10-25 09:36:37.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264898: ['FBtr0334914'] 2021-10-25 09:36:37.551 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264898 has a single transcript. 2021-10-25 09:36:37.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013674: ['FBtr0100861'] 2021-10-25 09:36:37.556 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013674 has a single transcript. 2021-10-25 09:36:37.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264899: ['FBtr0334931'] 2021-10-25 09:36:37.558 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264899 has a single transcript. 2021-10-25 09:36:37.563 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013675: ['FBtr0100863'] 2021-10-25 09:36:37.563 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013675 has a single transcript. 2021-10-25 09:36:37.564 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264900: ['FBtr0334932'] 2021-10-25 09:36:37.565 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264900 has a single transcript. 2021-10-25 09:36:37.570 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013676: ['FBtr0100868'] 2021-10-25 09:36:37.570 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013676 has a single transcript. 2021-10-25 09:36:37.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264901: ['FBtr0334944'] 2021-10-25 09:36:37.571 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264901 has a single transcript. 2021-10-25 09:36:37.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013678: ['FBtr0433502'] 2021-10-25 09:36:37.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013678 has a single transcript. 2021-10-25 09:36:37.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264902: ['FBtr0334945'] 2021-10-25 09:36:37.578 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264902 has a single transcript. 2021-10-25 09:36:37.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264903: ['FBtr0334958'] 2021-10-25 09:36:37.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264903 has a single transcript. 2021-10-25 09:36:37.585 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013679: ['FBtr0433499'] 2021-10-25 09:36:37.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013679 has a single transcript. 2021-10-25 09:36:37.593 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264904: ['FBtr0334954'] 2021-10-25 09:36:37.593 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264904 has a single transcript. 2021-10-25 09:36:37.594 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013680: ['FBtr0100857'] 2021-10-25 09:36:37.594 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013680 has a single transcript. 2021-10-25 09:36:37.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264905: ['FBtr0334962', 'FBtr0345276'] 2021-10-25 09:36:37.601 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013681: ['FBtr0100870'] 2021-10-25 09:36:37.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013681 has a single transcript. 2021-10-25 09:36:37.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013683: ['FBtr0100880'] 2021-10-25 09:36:37.609 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013683 has a single transcript. 2021-10-25 09:36:37.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013684: ['FBtr0433501'] 2021-10-25 09:36:37.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013684 has a single transcript. 2021-10-25 09:36:37.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031498: ['FBtr0077653', 'FBtr0344088', 'FBtr0335478'] 2021-10-25 09:36:37.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013685: ['FBtr0100883'] 2021-10-25 09:36:37.624 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013685 has a single transcript. 2021-10-25 09:36:37.631 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013686: ['FBtr0100888'] 2021-10-25 09:36:37.631 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013686 has a single transcript. 2021-10-25 09:36:37.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013688: ['FBtr0100890'] 2021-10-25 09:36:37.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013688 has a single transcript. 2021-10-25 09:36:37.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013689: ['FBtr0100871'] 2021-10-25 09:36:37.646 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013689 has a single transcript. 2021-10-25 09:36:37.653 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013690: ['FBtr0100859'] 2021-10-25 09:36:37.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013690 has a single transcript. 2021-10-25 09:36:37.654 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21721026, 21722762), (21721026, 21722748)] 2021-10-25 09:36:37.655 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.656 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013691: ['FBtr0100865'] 2021-10-25 09:36:37.661 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013691 has a single transcript. 2021-10-25 09:36:37.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013692: ['FBtr0100875'] 2021-10-25 09:36:37.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013692 has a single transcript. 2021-10-25 09:36:37.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013693: ['FBtr0100876'] 2021-10-25 09:36:37.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013693 has a single transcript. 2021-10-25 09:36:37.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013694: ['FBtr0100869'] 2021-10-25 09:36:37.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013694 has a single transcript. 2021-10-25 09:36:37.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013695: ['FBtr0100878'] 2021-10-25 09:36:37.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013695 has a single transcript. 2021-10-25 09:36:37.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013696: ['FBtr0100854'] 2021-10-25 09:36:37.697 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013696 has a single transcript. 2021-10-25 09:36:37.704 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013697: ['FBtr0100864'] 2021-10-25 09:36:37.703 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3037271, 3037529)] 2021-10-25 09:36:37.704 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013697 has a single transcript. 2021-10-25 09:36:37.705 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.705 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013698: ['FBtr0100887'] 2021-10-25 09:36:37.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013698 has a single transcript. 2021-10-25 09:36:37.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013699: ['FBtr0100862'] 2021-10-25 09:36:37.720 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013699 has a single transcript. 2021-10-25 09:36:37.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013700: ['FBtr0100856'] 2021-10-25 09:36:37.728 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013700 has a single transcript. 2021-10-25 09:36:37.735 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013701: ['FBtr0100873'] 2021-10-25 09:36:37.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013701 has a single transcript. 2021-10-25 09:36:37.739 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264906: ['FBtr0343102', 'FBtr0334963'] 2021-10-25 09:36:37.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013702: ['FBtr0100882'] 2021-10-25 09:36:37.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013702 has a single transcript. 2021-10-25 09:36:37.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013703: ['FBtr0100855'] 2021-10-25 09:36:37.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013703 has a single transcript. 2021-10-25 09:36:37.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013704: ['FBtr0100872'] 2021-10-25 09:36:37.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013704 has a single transcript. 2021-10-25 09:36:37.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013705: ['FBtr0100874'] 2021-10-25 09:36:37.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013705 has a single transcript. 2021-10-25 09:36:37.772 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013706: ['FBtr0100885'] 2021-10-25 09:36:37.772 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013706 has a single transcript. 2021-10-25 09:36:37.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013707: ['FBtr0100881'] 2021-10-25 09:36:37.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013707 has a single transcript. 2021-10-25 09:36:37.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013708: ['FBtr0100889'] 2021-10-25 09:36:37.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013708 has a single transcript. 2021-10-25 09:36:37.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013709: ['FBtr0100858'] 2021-10-25 09:36:37.794 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013709 has a single transcript. 2021-10-25 09:36:37.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24054445, 24054598), (24054454, 24054598)] 2021-10-25 09:36:37.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.801 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013710: ['FBtr0100860'] 2021-10-25 09:36:37.801 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013710 has a single transcript. 2021-10-25 09:36:37.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013717: ['FBtr0290259', 'FBtr0346438'] 2021-10-25 09:36:37.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031500: ['FBtr0077654', 'FBtr0077655', 'FBtr0335479'] 2021-10-25 09:36:37.863 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18619207, 18619376), (18620191, 18620258), (18620369, 18620430), (18620832, 18621371)] 2021-10-25 09:36:37.864 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.864 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264907: ['FBtr0345143', 'FBtr0334964', 'FBtr0334965', 'FBtr0334966'] 2021-10-25 09:36:37.920 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3040011, 3040237), (3040740, 3040791), (3041397, 3041452)] 2021-10-25 09:36:37.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.922 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:37.944 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013718: ['FBtr0307191', 'FBtr0100039', 'FBtr0100040', 'FBtr0100041', 'FBtr0100042', 'FBtr0100043', 'FBtr0100044', 'FBtr0306619', 'FBtr0306620', 'FBtr0306622', 'FBtr0306623', 'FBtr0306624'] 2021-10-25 09:36:37.994 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4752590, 4752796), (4752965, 4753039), (4753194, 4757542), (4758411, 4772932), (4758411, 4767978), (4758411, 4770521)] 2021-10-25 09:36:37.995 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:37.996 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031501: ['FBtr0077656', 'FBtr0335385'] 2021-10-25 09:36:38.105 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3042738, 3042835), (3043103, 3043180)] 2021-10-25 09:36:38.106 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.106 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031504: ['FBtr0077661'] 2021-10-25 09:36:38.187 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031504 has a single transcript. 2021-10-25 09:36:38.193 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264908: ['FBtr0343800', 'FBtr0343801', 'FBtr0334970', 'FBtr0334971', 'FBtr0334972', 'FBtr0334973', 'FBtr0334974', 'FBtr0334975', 'FBtr0334976', 'FBtr0334977', 'FBtr0334978', 'FBtr0334979', 'FBtr0334980', 'FBtr0334981', 'FBtr0334982', 'FBtr0334983'] 2021-10-25 09:36:38.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031505: ['FBtr0077617', 'FBtr0329905'] 2021-10-25 09:36:38.251 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3145249, 3145304), (3145448, 3145527)] 2021-10-25 09:36:38.253 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.254 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.312 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14191591, 14199944), (14200100, 14200167), (14200100, 14200164), (14200447, 14200738), (14200807, 14212193), (14200807, 14201621), (14201666, 14212193), (14205585, 14207405), (14205585, 14212193), (14207700, 14212193), (14212232, 14213088), (14213203, 14230175), (14219936, 14225430), (14221500, 14225430), (14226403, 14230175), (14228953, 14229827), (14230106, 14230175), (14230310, 14230655), (14231112, 14231176), (14231325, 14231596), (14231325, 14231926), (14231635, 14231926)] 2021-10-25 09:36:38.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.334 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031512: ['FBtr0077578', 'FBtr0344142'] 2021-10-25 09:36:38.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3174238, 3174303)] 2021-10-25 09:36:38.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031513: ['FBtr0301033', 'FBtr0340587'] 2021-10-25 09:36:38.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3269849, 3269912), (3269986, 3270043), (3270794, 3270852)] 2021-10-25 09:36:38.514 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.514 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.595 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031514: ['FBtr0077608', 'FBtr0077609', 'FBtr0340589', 'FBtr0344796'] 2021-10-25 09:36:38.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15851898, 15852138), (15852249, 15853430), (15852249, 15852694), (15852249, 15858100), (15852249, 15859811), (15852252, 15858100), (15852252, 15859811), (15852697, 15858100), (15852697, 15859811), (15852697, 15855756), (15853433, 15858100), (15856353, 15858100), (15856353, 15859811), (15858151, 15859811), (15860026, 15863083), (15860026, 15863967), (15863236, 15864601), (15864120, 15864601), (15864739, 15865757), (15865840, 15867265), (15867486, 15867554), (15867619, 15867982), (15867619, 15868558), (15868057, 15868558), (15868647, 15869247), (15868647, 15869829), (15869268, 15869829), (15870807, 15879319), (15879396, 15893619), (15893961, 15898935), (15893961, 15898834), (15893961, 15898831)] 2021-10-25 09:36:38.661 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15863418, 15864739, 'FBtr0334972_exon_11') contains intron (15864120, 15864601) 2021-10-25 09:36:38.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15852138, 15852697, 'FBtr0334976_exon_14') contains intron (15852249, 15852694) 2021-10-25 09:36:38.666 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334972_exon_11', 'FBtr0334976_exon_14'] 2021-10-25 09:36:38.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.723 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3276472, 3276532), (3277477, 3277542), (3277760, 3277828), (3277981, 3279253), (3277981, 3280307), (3277981, 3278156), (3278603, 3279253), (3278606, 3279253)] 2021-10-25 09:36:38.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:38.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:38.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031515: ['FBtr0077605', 'FBtr0077607', 'FBtr0077606', 'FBtr0305575'] 2021-10-25 09:36:38.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013720: ['FBtr0070255', 'FBtr0070256', 'FBtr0100198'] 2021-10-25 09:36:39.014 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1470795, 1470867), (1471063, 1471139), (1471348, 1471407), (1471603, 1471657)] 2021-10-25 09:36:39.016 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1471139, 1471603, 'FBtr0100198_exon_3') contains intron (1471348, 1471407) 2021-10-25 09:36:39.016 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100198_exon_3'] 2021-10-25 09:36:39.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.036 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3292112, 3292173), (3292298, 3292459), (3292301, 3292459), (3292576, 3292632), (3292576, 3292628), (3293017, 3293075), (3293265, 3293322), (3293949, 3294048), (3293949, 3294230), (3293949, 3294082), (3293949, 3294583)] 2021-10-25 09:36:39.038 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3292173, 3292576, 'FBtr0077606_exon_5') contains intron (3292298, 3292459) 2021-10-25 09:36:39.039 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077606_exon_5'] 2021-10-25 09:36:39.039 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013725: ['FBtr0087516'] 2021-10-25 09:36:39.153 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013725 has a single transcript. 2021-10-25 09:36:39.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013726: ['FBtr0088792', 'FBtr0088793'] 2021-10-25 09:36:39.222 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:39.223 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.224 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031516: ['FBtr0077604'] 2021-10-25 09:36:39.235 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031516 has a single transcript. 2021-10-25 09:36:39.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031517: ['FBtr0077580'] 2021-10-25 09:36:39.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031517 has a single transcript. 2021-10-25 09:36:39.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031518: ['FBtr0114460'] 2021-10-25 09:36:39.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031518 has a single transcript. 2021-10-25 09:36:39.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031519: ['FBtr0077603', 'FBtr0331372'] 2021-10-25 09:36:39.310 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013732: ['FBtr0086110', 'FBtr0336663'] 2021-10-25 09:36:39.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3317430, 3317547), (3317684, 3317912), (3318332, 3318456), (3318746, 3318814), (3318909, 3318969), (3319112, 3319238), (3319683, 3319747)] 2021-10-25 09:36:39.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.364 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:39.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.365 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031520: ['FBtr0077583', 'FBtr0339546'] 2021-10-25 09:36:39.461 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3320445, 3320514), (3320445, 3320517), (3320647, 3320804), (3321037, 3321516), (3322191, 3322307), (3322511, 3322690), (3322756, 3322815)] 2021-10-25 09:36:39.462 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.463 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013733: ['FBtr0301964', 'FBtr0087621', 'FBtr0087617', 'FBtr0087618', 'FBtr0087619', 'FBtr0087620', 'FBtr0087616', 'FBtr0273222', 'FBtr0273223', 'FBtr0273224', 'FBtr0273225', 'FBtr0273226', 'FBtr0301591', 'FBtr0301592', 'FBtr0301593', 'FBtr0304847', 'FBtr0304848', 'FBtr0304849', 'FBtr0304850', 'FBtr0304851', 'FBtr0304852', 'FBtr0304853'] 2021-10-25 09:36:39.533 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264909: ['FBtr0334987'] 2021-10-25 09:36:39.533 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264909 has a single transcript. 2021-10-25 09:36:39.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031522: ['FBtr0077586', 'FBtr0339547'] 2021-10-25 09:36:39.541 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264911: ['FBtr0345943', 'FBtr0345944'] 2021-10-25 09:36:39.593 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3331056, 3331117), (3331347, 3331413), (3331544, 3331611), (3331943, 3332002), (3332415, 3332480)] 2021-10-25 09:36:39.594 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4895881, 4901845), (4901974, 4902101), (4901974, 4902030), (4902223, 4907167), (4907555, 4907613)] 2021-10-25 09:36:39.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.595 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.595 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.596 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031523: ['FBtr0077587'] 2021-10-25 09:36:39.670 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031523 has a single transcript. 2021-10-25 09:36:39.673 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264912: ['FBtr0335001'] 2021-10-25 09:36:39.673 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264912 has a single transcript. 2021-10-25 09:36:39.680 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031526: ['FBtr0077588'] 2021-10-25 09:36:39.681 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031526 has a single transcript. 2021-10-25 09:36:39.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264914: ['FBtr0334999'] 2021-10-25 09:36:39.683 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264914 has a single transcript. 2021-10-25 09:36:39.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031528: ['FBtr0113018', 'FBtr0332408'] 2021-10-25 09:36:39.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264915: ['FBtr0335017', 'FBtr0344303'] 2021-10-25 09:36:39.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3373691, 3373810), (3373691, 3373780), (3373927, 3373983), (3374065, 3374120), (3375028, 3375084)] 2021-10-25 09:36:39.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.749 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20911709, 20911770), (20912345, 20912421)] 2021-10-25 09:36:39.750 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.750 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20911639, 20912345, 'FBtr0335017_exon_1') contains intron (20911709, 20911770) 2021-10-25 09:36:39.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335017_exon_1'] 2021-10-25 09:36:39.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031529: ['FBtr0077594', 'FBtr0332407'] 2021-10-25 09:36:39.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264916: ['FBtr0335018'] 2021-10-25 09:36:39.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264916 has a single transcript. 2021-10-25 09:36:39.841 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264922: ['FBtr0079356', 'FBtr0346716'] 2021-10-25 09:36:39.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3376420, 3376480)] 2021-10-25 09:36:39.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.900 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6967385, 6967507)] 2021-10-25 09:36:39.901 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:39.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:39.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031530: ['FBtr0077592', 'FBtr0303992'] 2021-10-25 09:36:39.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264939: ['FBtr0335050'] 2021-10-25 09:36:39.983 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264939 has a single transcript. 2021-10-25 09:36:39.996 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264940: ['FBtr0335051'] 2021-10-25 09:36:39.996 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264940 has a single transcript. 2021-10-25 09:36:40.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264941: ['FBtr0335121'] 2021-10-25 09:36:40.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264941 has a single transcript. 2021-10-25 09:36:40.009 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264942: ['FBtr0335124'] 2021-10-25 09:36:40.010 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264942 has a single transcript. 2021-10-25 09:36:40.016 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264943: ['FBtr0335168'] 2021-10-25 09:36:40.016 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264943 has a single transcript. 2021-10-25 09:36:40.023 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264944: ['FBtr0335165'] 2021-10-25 09:36:40.023 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264944 has a single transcript. 2021-10-25 09:36:40.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3405878, 3406066), (3406239, 3406459), (3407147, 3407245), (3407412, 3407471), (3407683, 3407757), (3408030, 3421487), (3421698, 3426485), (3421698, 3422759)] 2021-10-25 09:36:40.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264945: ['FBtr0335164'] 2021-10-25 09:36:40.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264945 has a single transcript. 2021-10-25 09:36:40.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264946: ['FBtr0335158'] 2021-10-25 09:36:40.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264946 has a single transcript. 2021-10-25 09:36:40.045 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264947: ['FBtr0335185'] 2021-10-25 09:36:40.046 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264947 has a single transcript. 2021-10-25 09:36:40.052 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264948: ['FBtr0335189'] 2021-10-25 09:36:40.053 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264948 has a single transcript. 2021-10-25 09:36:40.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264949: ['FBtr0335188'] 2021-10-25 09:36:40.059 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264949 has a single transcript. 2021-10-25 09:36:40.066 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264950: ['FBtr0335191'] 2021-10-25 09:36:40.066 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264950 has a single transcript. 2021-10-25 09:36:40.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264951: ['FBtr0335193'] 2021-10-25 09:36:40.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264951 has a single transcript. 2021-10-25 09:36:40.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264952: ['FBtr0335192'] 2021-10-25 09:36:40.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264952 has a single transcript. 2021-10-25 09:36:40.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031531: ['FBtr0077590'] 2021-10-25 09:36:40.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031531 has a single transcript. 2021-10-25 09:36:40.113 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264953: ['FBtr0335175', 'FBtr0335176', 'FBtr0335177', 'FBtr0335178', 'FBtr0335179', 'FBtr0335180', 'FBtr0335181', 'FBtr0335182', 'FBtr0335183', 'FBtr0347414', 'FBtr0347415'] 2021-10-25 09:36:40.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031533: ['FBtr0077516'] 2021-10-25 09:36:40.120 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031533 has a single transcript. 2021-10-25 09:36:40.128 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031534: ['FBtr0077517', 'FBtr0343238'] 2021-10-25 09:36:40.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3449977, 3450184), (3450288, 3450357), (3451243, 3451300), (3451243, 3451306), (3451453, 3451516)] 2021-10-25 09:36:40.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13865495, 13865756), (13865495, 13866448), (13865495, 13866060), (13865905, 13866060), (13866126, 13866448), (13866632, 13866701), (13866975, 13867124), (13866975, 13868155), (13867303, 13869859), (13868349, 13869859), (13869977, 13870042), (13870272, 13870337), (13870455, 13870521), (13870696, 13870839), (13870696, 13871293), (13870911, 13871978), (13870911, 13871293), (13871338, 13871665), (13871338, 13871978), (13871725, 13871978), (13872153, 13872208), (13874168, 13874233), (13874459, 13874858), (13874459, 13874731), (13874743, 13874858), (13882336, 13882400), (13882547, 13901436), (13882547, 13894129), (13882547, 13884094), (13894592, 13894838), (13894969, 13895109), (13894969, 13899449), (13895307, 13897547), (13899671, 13900365), (13900449, 13901436), (13901572, 13901686), (13902317, 13902653), (13903572, 13903813), (13904182, 13904247), (13905161, 13905221), (13905501, 13916853), (13905501, 13907588), (13908351, 13910772), (13917024, 13917117), (13917207, 13917708), (13917207, 13917848), (13917207, 13917565), (13917625, 13917848), (13917726, 13917848), (13917910, 13933629), (13917910, 13921546), (13922173, 13925309), (13934182, 13942065)] 2021-10-25 09:36:40.214 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.214 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031535: ['FBtr0113019'] 2021-10-25 09:36:40.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031535 has a single transcript. 2021-10-25 09:36:40.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031536: ['FBtr0077573'] 2021-10-25 09:36:40.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031536 has a single transcript. 2021-10-25 09:36:40.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031538: ['FBtr0077572'] 2021-10-25 09:36:40.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031538 has a single transcript. 2021-10-25 09:36:40.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031540: ['FBtr0077569', 'FBtr0343239'] 2021-10-25 09:36:40.344 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3468897, 3468949)] 2021-10-25 09:36:40.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.417 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031542: ['FBtr0077568'] 2021-10-25 09:36:40.417 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031542 has a single transcript. 2021-10-25 09:36:40.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031544: ['FBtr0077525', 'FBtr0333250'] 2021-10-25 09:36:40.509 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3515277, 3515719), (3516268, 3516329), (3516677, 3516735)] 2021-10-25 09:36:40.511 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.510 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8163457, 8173015), (8163518, 8173015), (8173209, 8173275), (8173540, 8173600), (8173908, 8174140), (8174267, 8174348), (8174468, 8174535), (8174698, 8175994), (8174698, 8175175), (8174698, 8176572), (8175397, 8176572), (8175397, 8175994), (8176051, 8176572), (8176806, 8176875), (8177073, 8177129), (8177073, 8177120), (8177689, 8177778), (8178397, 8178458), (8178951, 8179010), (8179815, 8179871), (8180029, 8182304), (8180029, 8181983), (8180029, 8180195), (8180860, 8181058), (8181320, 8182304), (8182049, 8182304), (8182450, 8183188), (8182450, 8182626), (8182450, 8183140), (8182875, 8183188), (8182878, 8183188), (8183563, 8183629), (8183706, 8184814), (8183706, 8186116), (8183706, 8184126), (8184393, 8184814), (8184850, 8185125), (8184850, 8186116), (8185278, 8186116), (8186255, 8186313), (8186675, 8186737), (8186884, 8186947), (8187092, 8187160), (8188094, 8188167), (8188675, 8188735), (8188877, 8188931)] 2021-10-25 09:36:40.511 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.522 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.522 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.611 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031545: ['FBtr0077561'] 2021-10-25 09:36:40.612 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031545 has a single transcript. 2021-10-25 09:36:40.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031546: ['FBtr0077526', 'FBtr0333251'] 2021-10-25 09:36:40.695 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3519948, 3520378), (3521308, 3521367)] 2021-10-25 09:36:40.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.788 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031547: ['FBtr0077560'] 2021-10-25 09:36:40.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031547 has a single transcript. 2021-10-25 09:36:40.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031548: ['FBtr0089937'] 2021-10-25 09:36:40.798 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031548 has a single transcript. 2021-10-25 09:36:40.805 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031549: ['FBtr0301590'] 2021-10-25 09:36:40.805 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031549 has a single transcript. 2021-10-25 09:36:40.812 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031550: ['FBtr0077529'] 2021-10-25 09:36:40.812 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031550 has a single transcript. 2021-10-25 09:36:40.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031554: ['FBtr0077556', 'FBtr0446100'] 2021-10-25 09:36:40.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3621324, 3621388)] 2021-10-25 09:36:40.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:40.891 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:40.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031558: ['FBtr0077550', 'FBtr0339575'] 2021-10-25 09:36:41.032 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3692355, 3692470)] 2021-10-25 09:36:41.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031559: ['FBtr0077549'] 2021-10-25 09:36:41.100 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031559 has a single transcript. 2021-10-25 09:36:41.108 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031560: ['FBtr0077547'] 2021-10-25 09:36:41.108 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031560 has a single transcript. 2021-10-25 09:36:41.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031561: ['FBtr0077546', 'FBtr0345610'] 2021-10-25 09:36:41.177 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3696471, 3696531)] 2021-10-25 09:36:41.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.178 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031562: ['FBtr0077545', 'FBtr0346581'] 2021-10-25 09:36:41.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264954: ['FBtr0335187'] 2021-10-25 09:36:41.250 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264954 has a single transcript. 2021-10-25 09:36:41.258 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264955: ['FBtr0335255'] 2021-10-25 09:36:41.259 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264955 has a single transcript. 2021-10-25 09:36:41.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264956: ['FBtr0335264'] 2021-10-25 09:36:41.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264956 has a single transcript. 2021-10-25 09:36:41.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264957: ['FBtr0335265'] 2021-10-25 09:36:41.273 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264957 has a single transcript. 2021-10-25 09:36:41.280 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264958: ['FBtr0335267', 'FBtr0335268'] 2021-10-25 09:36:41.315 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:41.316 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.317 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5967559, 5967678)] 2021-10-25 09:36:41.364 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5967396, 5967746, 'FBtr0335267_exon_1') contains intron (5967559, 5967678) 2021-10-25 09:36:41.365 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335267_exon_1'] 2021-10-25 09:36:41.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031563: ['FBtr0077544'] 2021-10-25 09:36:41.402 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031563 has a single transcript. 2021-10-25 09:36:41.411 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031564: ['FBtr0300299'] 2021-10-25 09:36:41.411 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031564 has a single transcript. 2021-10-25 09:36:41.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031566: ['FBtr0077537', 'FBtr0077538'] 2021-10-25 09:36:41.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264959: ['FBtr0335275', 'FBtr0335276'] 2021-10-25 09:36:41.492 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3713736, 3714091), (3714491, 3714646), (3714583, 3714646), (3716104, 3716156), (3716303, 3716388)] 2021-10-25 09:36:41.493 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.525 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5982708, 5986571), (5986666, 6009062), (5993377, 5997763), (6001423, 6009062), (6009184, 6009270), (6009355, 6009422), (6009501, 6010378), (6010547, 6010609), (6010768, 6010931), (6011109, 6011170), (6011337, 6011402)] 2021-10-25 09:36:41.527 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.527 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031568: ['FBtr0273188', 'FBtr0321291'] 2021-10-25 09:36:41.618 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264960: ['FBtr0335277'] 2021-10-25 09:36:41.618 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264960 has a single transcript. 2021-10-25 09:36:41.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3730792, 3745428), (3746046, 3746211), (3746823, 3747116), (3747289, 3747589), (3747731, 3748605), (3748779, 3749021), (3749323, 3749415), (3749571, 3749724), (3749886, 3749997), (3750169, 3750233), (3750715, 3750797), (3750961, 3751769)] 2021-10-25 09:36:41.626 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.626 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264961: ['FBtr0335288'] 2021-10-25 09:36:41.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264961 has a single transcript. 2021-10-25 09:36:41.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264962: ['FBtr0339985', 'FBtr0339986', 'FBtr0301513', 'FBtr0302109', 'FBtr0302294', 'FBtr0302560', 'FBtr0345528'] 2021-10-25 09:36:41.709 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031571: ['FBtr0077496', 'FBtr0307051', 'FBtr0307052'] 2021-10-25 09:36:41.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013746: ['FBtr0079780', 'FBtr0079781', 'FBtr0343095', 'FBtr0339550'] 2021-10-25 09:36:41.790 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3787318, 3790537), (3790078, 3790537), (3791145, 3792595), (3792774, 3792832), (3796886, 3796948), (3799154, 3799216), (3799428, 3799497), (3799853, 3799911), (3800037, 3800289), (3800037, 3800207), (3800231, 3800289), (3800387, 3800450), (3800821, 3800879), (3801104, 3801207)] 2021-10-25 09:36:41.792 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.792 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8995538, 8995601), (8995746, 8995803), (8996136, 8996197), (8996679, 8996742), (8996868, 8996930), (8997125, 8997209)] 2021-10-25 09:36:41.843 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8995478, 8995746, 'FBtr0343095_exon_6') contains intron (8995538, 8995601) 2021-10-25 09:36:41.844 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0343095_exon_6'] 2021-10-25 09:36:41.844 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.849 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14862121, 14862194), (14862668, 14862730), (14865058, 14865171), (14865274, 14865341), (14865447, 14865507), (14865733, 14867483), (14865766, 14867483), (14866051, 14867483), (14866075, 14867483), (14868171, 14868232), (14868562, 14868627), (14868843, 14868906), (14869032, 14870048), (14870312, 14870919)] 2021-10-25 09:36:41.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:41.852 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:41.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031573: ['FBtr0077515'] 2021-10-25 09:36:41.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031573 has a single transcript. 2021-10-25 09:36:41.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031574: ['FBtr0077501', 'FBtr0077502', 'FBtr0334832'] 2021-10-25 09:36:42.003 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3862825, 3863554), (3863368, 3863554), (3864195, 3864541), (3865001, 3865060), (3865432, 3865497), (3865684, 3865746), (3865917, 3865977), (3866986, 3867068)] 2021-10-25 09:36:42.005 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3865977, 3867504, 'FBtr0077502_exon_7') contains intron (3866986, 3867068) 2021-10-25 09:36:42.005 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077502_exon_7'] 2021-10-25 09:36:42.006 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013749: ['FBtr0089192', 'FBtr0333699'] 2021-10-25 09:36:42.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1124331, 1124435), (1124698, 1124767), (1124893, 1124949)] 2021-10-25 09:36:42.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031575: ['FBtr0077504', 'FBtr0301082'] 2021-10-25 09:36:42.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013750: ['FBtr0087375', 'FBtr0087376', 'FBtr0087377', 'FBtr0087378', 'FBtr0087379'] 2021-10-25 09:36:42.186 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3867988, 3868379), (3868540, 3868603), (3869061, 3869117), (3869476, 3869542), (3869803, 3869872), (3870049, 3870124), (3870554, 3870621)] 2021-10-25 09:36:42.188 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.188 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264975: ['FBtr0071207', 'FBtr0071208', 'FBtr0071209', 'FBtr0301762', 'FBtr0301763', 'FBtr0301764', 'FBtr0305914', 'FBtr0333522', 'FBtr0333523'] 2021-10-25 09:36:42.260 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031579: ['FBtr0077505'] 2021-10-25 09:36:42.260 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031579 has a single transcript. 2021-10-25 09:36:42.270 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031580: ['FBtr0077506'] 2021-10-25 09:36:42.270 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031580 has a single transcript. 2021-10-25 09:36:42.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031585: ['FBtr0077468'] 2021-10-25 09:36:42.277 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031585 has a single transcript. 2021-10-25 09:36:42.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031589: ['FBtr0077479', 'FBtr0077480', 'FBtr0077481', 'FBtr0077482', 'FBtr0077483', 'FBtr0113020', 'FBtr0334791', 'FBtr0334792'] 2021-10-25 09:36:42.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15322712, 15323448), (15322712, 15323123), (15322741, 15323448), (15322741, 15323123), (15323030, 15323123), (15323141, 15323448), (15323565, 15323844), (15324147, 15324201)] 2021-10-25 09:36:42.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.303 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.484 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8517420, 8531696), (8517509, 8531696), (8517634, 8531696), (8517757, 8531696), (8518398, 8531524), (8532019, 8532334), (8532464, 8544849), (8547663, 8547737), (8547905, 8547977), (8548355, 8548421), (8548525, 8551749), (8548525, 8549017), (8548525, 8550082), (8549356, 8550082)] 2021-10-25 09:36:42.488 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.488 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.531 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4190019, 4190082), (4190492, 4190558), (4190824, 4192632), (4190824, 4193309), (4190824, 4193324), (4192968, 4193309), (4192968, 4193324), (4193481, 4193538), (4193679, 4194817), (4194945, 4195016), (4195100, 4195538), (4195665, 4195733), (4195904, 4196474), (4196779, 4197964), (4196779, 4197146), (4196779, 4197872), (4196814, 4197964), (4196814, 4197146), (4197191, 4197251)] 2021-10-25 09:36:42.534 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197146, 4197380, 'FBtr0077481_exon_1') contains intron (4197191, 4197251) 2021-10-25 09:36:42.534 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197146, 4197380, 'FBtr0077482_exon_1') contains intron (4197191, 4197251) 2021-10-25 09:36:42.535 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4197146, 4197380, 'FBtr0077483_exon_1') contains intron (4197191, 4197251) 2021-10-25 09:36:42.537 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077481_exon_1', 'FBtr0077482_exon_1', 'FBtr0077483_exon_1'] 2021-10-25 09:36:42.537 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013751: ['FBtr0073155', 'FBtr0073156', 'FBtr0330070', 'FBtr0330071'] 2021-10-25 09:36:42.677 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3846747, 3857941), (3858123, 3859166), (3859384, 3860189), (3860411, 3860635), (3860423, 3860700), (3860423, 3860635), (3860761, 3860890)] 2021-10-25 09:36:42.679 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.679 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.699 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073156': ['FBtr0330070']} 2021-10-25 09:36:42.699 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330070']] 2021-10-25 09:36:42.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013753: ['FBtr0072758', 'FBtr0330180'] 2021-10-25 09:36:42.862 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:42.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.863 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.873 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0072758': ['FBtr0330180']} 2021-10-25 09:36:42.874 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330180']] 2021-10-25 09:36:42.883 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013755: ['FBtr0072760'] 2021-10-25 09:36:42.883 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013755 has a single transcript. 2021-10-25 09:36:42.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013756: ['FBtr0088033', 'FBtr0332464'] 2021-10-25 09:36:42.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031590: ['FBtr0077477', 'FBtr0334790'] 2021-10-25 09:36:42.953 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11852906, 11853347), (11859483, 11859539), (11859871, 11859929), (11860063, 11860314)] 2021-10-25 09:36:42.954 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.955 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:42.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264978: ['FBtr0077782', 'FBtr0335169'] 2021-10-25 09:36:42.996 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4226767, 4226846)] 2021-10-25 09:36:42.997 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:42.997 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.029 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2490678, 2490732), (2491442, 2491512), (2492201, 2492258), (2492418, 2492492)] 2021-10-25 09:36:43.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.059 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013759: ['FBtr0084161', 'FBtr0084162', 'FBtr0330368', 'FBtr0112872', 'FBtr0112873', 'FBtr0301327', 'FBtr0301328'] 2021-10-25 09:36:43.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031592: ['FBtr0077476', 'FBtr0345748'] 2021-10-25 09:36:43.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264979: ['FBtr0077751', 'FBtr0335159'] 2021-10-25 09:36:43.126 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4278669, 4278795), (4279025, 4279083), (4279349, 4281199)] 2021-10-25 09:36:43.127 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.127 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.181 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2242591, 2242692), (2242945, 2243559)] 2021-10-25 09:36:43.183 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.183 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.198 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031596: ['FBtr0077428', 'FBtr0334400'] 2021-10-25 09:36:43.255 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4353193, 4353249), (4353195, 4353249), (4353615, 4353678)] 2021-10-25 09:36:43.256 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.256 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264980: ['FBtr0335287'] 2021-10-25 09:36:43.261 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264980 has a single transcript. 2021-10-25 09:36:43.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21786862, 21786929), (21787105, 21787172), (21787280, 21787785), (21787908, 21787982), (21788102, 21789448), (21788102, 21788873), (21788927, 21789448), (21789587, 21789661), (21789760, 21791530), (21789760, 21790708), (21790738, 21791530), (21791599, 21791728), (21791893, 21791960), (21792146, 21803328), (21792146, 21803683), (21792146, 21817100), (21803389, 21807598), (21805175, 21807598), (21807734, 21808616), (21817450, 21817817), (21818085, 21818151), (21818509, 21818871), (21818949, 21819017), (21819123, 21819653), (21819766, 21820646), (21821023, 21822482)] 2021-10-25 09:36:43.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264982: ['FBtr0335425'] 2021-10-25 09:36:43.271 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264982 has a single transcript. 2021-10-25 09:36:43.275 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.275 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264983: ['FBtr0335428'] 2021-10-25 09:36:43.279 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264983 has a single transcript. 2021-10-25 09:36:43.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264984: ['FBtr0335437'] 2021-10-25 09:36:43.286 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264984 has a single transcript. 2021-10-25 09:36:43.293 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264985: ['FBtr0335442'] 2021-10-25 09:36:43.293 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264985 has a single transcript. 2021-10-25 09:36:43.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264986: ['FBtr0335446'] 2021-10-25 09:36:43.301 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264986 has a single transcript. 2021-10-25 09:36:43.306 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0084161': ['FBtr0330368']} 2021-10-25 09:36:43.306 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330368']] 2021-10-25 09:36:43.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264987: ['FBtr0335457'] 2021-10-25 09:36:43.307 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264987 has a single transcript. 2021-10-25 09:36:43.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264988: ['FBtr0335463'] 2021-10-25 09:36:43.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264988 has a single transcript. 2021-10-25 09:36:43.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264989: ['FBtr0335467'] 2021-10-25 09:36:43.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264989 has a single transcript. 2021-10-25 09:36:43.329 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264990: ['FBtr0335468'] 2021-10-25 09:36:43.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264990 has a single transcript. 2021-10-25 09:36:43.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031597: ['FBtr0077463', 'FBtr0077464'] 2021-10-25 09:36:43.336 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264991: ['FBtr0335461'] 2021-10-25 09:36:43.336 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264991 has a single transcript. 2021-10-25 09:36:43.343 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264992: ['FBtr0335469'] 2021-10-25 09:36:43.343 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264992 has a single transcript. 2021-10-25 09:36:43.350 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264993: ['FBtr0335477'] 2021-10-25 09:36:43.350 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264993 has a single transcript. 2021-10-25 09:36:43.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264994: ['FBtr0335470'] 2021-10-25 09:36:43.358 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264994 has a single transcript. 2021-10-25 09:36:43.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264995: ['FBtr0335500'] 2021-10-25 09:36:43.365 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264995 has a single transcript. 2021-10-25 09:36:43.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264996: ['FBtr0335483'] 2021-10-25 09:36:43.371 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264996 has a single transcript. 2021-10-25 09:36:43.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264997: ['FBtr0335490'] 2021-10-25 09:36:43.378 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264997 has a single transcript. 2021-10-25 09:36:43.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264998: ['FBtr0335493'] 2021-10-25 09:36:43.385 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264998 has a single transcript. 2021-10-25 09:36:43.390 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4382643, 4382696)] 2021-10-25 09:36:43.392 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0264999: ['FBtr0335496'] 2021-10-25 09:36:43.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0264999 has a single transcript. 2021-10-25 09:36:43.392 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265000: ['FBtr0335498'] 2021-10-25 09:36:43.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265000 has a single transcript. 2021-10-25 09:36:43.406 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265001: ['FBtr0335505'] 2021-10-25 09:36:43.406 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265001 has a single transcript. 2021-10-25 09:36:43.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265002: ['FBtr0335509', 'FBtr0335510'] 2021-10-25 09:36:43.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10065315, 10065613), (10066117, 10066186), (10066376, 10068222), (10068355, 10068635), (10069672, 10073174), (10073384, 10074138), (10074277, 10074345), (10074528, 10075220), (10075370, 10075918), (10076265, 10080374), (10080491, 10081247), (10081946, 10086200), (10086306, 10096913), (10097053, 10097782), (10098010, 10126000), (10126230, 10127517), (10127609, 10127769), (10127877, 10136645), (10137559, 10178040), (10178477, 10180106)] 2021-10-25 09:36:43.471 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.471 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031598: ['FBtr0077462'] 2021-10-25 09:36:43.482 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031598 has a single transcript. 2021-10-25 09:36:43.491 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031600: ['FBtr0077460'] 2021-10-25 09:36:43.491 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031600 has a single transcript. 2021-10-25 09:36:43.498 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031601: ['FBtr0077435'] 2021-10-25 09:36:43.498 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031601 has a single transcript. 2021-10-25 09:36:43.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031602: ['FBtr0077459', 'FBtr0331436'] 2021-10-25 09:36:43.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265003: ['FBtr0335512', 'FBtr0335513', 'FBtr0335514', 'FBtr0335515', 'FBtr0335516', 'FBtr0335517'] 2021-10-25 09:36:43.565 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4408120, 4408195), (4408506, 4408575), (4409370, 4439098), (4439486, 4441157)] 2021-10-25 09:36:43.566 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.567 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.620 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013762: ['FBtr0087350'] 2021-10-25 09:36:43.620 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013762 has a single transcript. 2021-10-25 09:36:43.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013763: ['FBtr0087111', 'FBtr0340066'] 2021-10-25 09:36:43.645 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031603: ['FBtr0077438', 'FBtr0331434', 'FBtr0331435'] 2021-10-25 09:36:43.680 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16691208, 16691617), (16691899, 16692347), (16692923, 16692985)] 2021-10-25 09:36:43.681 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.681 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.725 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4442368, 4442477), (4442420, 4442477)] 2021-10-25 09:36:43.727 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.727 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.747 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6811175, 6811901), (6812083, 6812780), (6812694, 6812780), (6813116, 6813172), (6813753, 6815059), (6813753, 6814036), (6816559, 6816616), (6816729, 6816792)] 2021-10-25 09:36:43.749 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.749 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.756 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013764: ['FBtr0072191', 'FBtr0072192'] 2021-10-25 09:36:43.810 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24033572, 24033678), (24033572, 24033822)] 2021-10-25 09:36:43.811 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.812 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:43.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031604: ['FBtr0077439'] 2021-10-25 09:36:43.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031604 has a single transcript. 2021-10-25 09:36:43.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031606: ['FBtr0077455'] 2021-10-25 09:36:43.873 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031606 has a single transcript. 2021-10-25 09:36:43.880 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031607: ['FBtr0077454'] 2021-10-25 09:36:43.880 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031607 has a single transcript. 2021-10-25 09:36:43.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031608: ['FBtr0077441', 'FBtr0345632'] 2021-10-25 09:36:43.894 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013765: ['FBtr0100654', 'FBtr0087704', 'FBtr0087703', 'FBtr0100656', 'FBtr0309888', 'FBtr0309889', 'FBtr0309890', 'FBtr0309891', 'FBtr0309892', 'FBtr0309893', 'FBtr0301395', 'FBtr0306635'] 2021-10-25 09:36:43.941 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4460133, 4460203)] 2021-10-25 09:36:43.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:43.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.022 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031609: ['FBtr0077450', 'FBtr0335134'] 2021-10-25 09:36:44.072 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265011: ['FBtr0112560', 'FBtr0307883'] 2021-10-25 09:36:44.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4462563, 4462623)] 2021-10-25 09:36:44.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8993705, 8993766), (8994038, 8994103), (8994256, 8994311), (8994489, 8995545), (8995953, 8996137), (8997707, 8997770), (8997928, 9001383), (9001606, 9005003), (9001606, 9006488)] 2021-10-25 09:36:44.132 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031610: ['FBtr0077442'] 2021-10-25 09:36:44.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031610 has a single transcript. 2021-10-25 09:36:44.156 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031611: ['FBtr0077443'] 2021-10-25 09:36:44.156 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031611 has a single transcript. 2021-10-25 09:36:44.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031613: ['FBtr0077444'] 2021-10-25 09:36:44.163 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031613 has a single transcript. 2021-10-25 09:36:44.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031617: ['FBtr0300354'] 2021-10-25 09:36:44.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031617 has a single transcript. 2021-10-25 09:36:44.177 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031619: ['FBtr0077376', 'FBtr0100560'] 2021-10-25 09:36:44.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265017: ['FBtr0334810'] 2021-10-25 09:36:44.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265017 has a single transcript. 2021-10-25 09:36:44.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265038: ['FBtr0336465'] 2021-10-25 09:36:44.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265038 has a single transcript. 2021-10-25 09:36:44.231 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4651688, 4651764), (4652156, 4652422)] 2021-10-25 09:36:44.232 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4651764, 4652877, 'FBtr0100560_exon_2') contains intron (4652156, 4652422) 2021-10-25 09:36:44.232 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100560_exon_2'] 2021-10-25 09:36:44.232 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265039: ['FBtr0336464'] 2021-10-25 09:36:44.234 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265039 has a single transcript. 2021-10-25 09:36:44.241 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265040: ['FBtr0336463'] 2021-10-25 09:36:44.242 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265040 has a single transcript. 2021-10-25 09:36:44.249 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265041: ['FBtr0336470'] 2021-10-25 09:36:44.249 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265041 has a single transcript. 2021-10-25 09:36:44.261 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265042: ['FBtr0336473', 'FBtr0336474', 'FBtr0336475', 'FBtr0336476', 'FBtr0336477', 'FBtr0336478', 'FBtr0336479'] 2021-10-25 09:36:44.281 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13440328, 13440391), (13442516, 13442933), (13443128, 13443453), (13443128, 13444427), (13443158, 13444427), (13443692, 13443752), (13443816, 13443887), (13444106, 13444174), (13444342, 13444427), (13444694, 13444764), (13445138, 13445546), (13445138, 13445210), (13445590, 13450173), (13445590, 13447131), (13447328, 13449307), (13447328, 13449218), (13447328, 13448996)] 2021-10-25 09:36:44.283 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13443239, 13443816, 'FBtr0309888_exon_6') contains intron (13443692, 13443752) 2021-10-25 09:36:44.284 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13443752, 13444106, 'FBtr0309890_exon_6') contains intron (13443816, 13443887) 2021-10-25 09:36:44.286 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13443752, 13444106, 'FBtr0306635_exon_5') contains intron (13443816, 13443887) 2021-10-25 09:36:44.286 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309888_exon_6', 'FBtr0309890_exon_6', 'FBtr0306635_exon_5'] 2021-10-25 09:36:44.286 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.313 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031620: ['FBtr0077377', 'FBtr0343222'] 2021-10-25 09:36:44.365 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4682921, 4682976), (4682921, 4682979), (4683044, 4684511)] 2021-10-25 09:36:44.366 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.366 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.445 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031621: ['FBtr0077378'] 2021-10-25 09:36:44.446 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031621 has a single transcript. 2021-10-25 09:36:44.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031622: ['FBtr0077422'] 2021-10-25 09:36:44.456 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031622 has a single transcript. 2021-10-25 09:36:44.462 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031623: ['FBtr0077420'] 2021-10-25 09:36:44.462 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031623 has a single transcript. 2021-10-25 09:36:44.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23168385, 23169895), (23168784, 23169895), (23170480, 23182945), (23174818, 23182945), (23179173, 23182945), (23182304, 23182945), (23183060, 23183443), (23184164, 23184222)] 2021-10-25 09:36:44.466 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031626: ['FBtr0077419', 'FBtr0343223'] 2021-10-25 09:36:44.527 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4734244, 4734305), (4734254, 4734305)] 2021-10-25 09:36:44.528 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.528 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031627: ['FBtr0077418'] 2021-10-25 09:36:44.602 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031627 has a single transcript. 2021-10-25 09:36:44.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031628: ['FBtr0077381', 'FBtr0077382'] 2021-10-25 09:36:44.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4794685, 4794752), (4795571, 4795842), (4795946, 4796062), (4795975, 4796092), (4796219, 4796286)] 2021-10-25 09:36:44.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031629: ['FBtr0077417', 'FBtr0332595'] 2021-10-25 09:36:44.811 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4797638, 4799745), (4799878, 4801816), (4799878, 4801443)] 2021-10-25 09:36:44.812 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.813 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265043: ['FBtr0336488'] 2021-10-25 09:36:44.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265043 has a single transcript. 2021-10-25 09:36:44.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265044: ['FBtr0336521', 'FBtr0336522'] 2021-10-25 09:36:44.891 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031630: ['FBtr0077383'] 2021-10-25 09:36:44.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031630 has a single transcript. 2021-10-25 09:36:44.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6216603, 6218439), (6216603, 6216685), (6216737, 6216824)] 2021-10-25 09:36:44.893 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.893 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031631: ['FBtr0077416'] 2021-10-25 09:36:44.902 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031631 has a single transcript. 2021-10-25 09:36:44.910 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031632: ['FBtr0077384', 'FBtr0336962'] 2021-10-25 09:36:44.939 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013767: ['FBtr0082927'] 2021-10-25 09:36:44.940 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013767 has a single transcript. 2021-10-25 09:36:44.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013770: ['FBtr0087592', 'FBtr0087593', 'FBtr0339955', 'FBtr0304021'] 2021-10-25 09:36:44.967 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4823235, 4825607), (4825711, 4826446), (4826563, 4826624), (4827100, 4827172)] 2021-10-25 09:36:44.969 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:44.969 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:44.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265045: ['FBtr0336643', 'FBtr0336644', 'FBtr0336645', 'FBtr0336646', 'FBtr0336647', 'FBtr0336648', 'FBtr0336649', 'FBtr0336650', 'FBtr0336651', 'FBtr0336652'] 2021-10-25 09:36:45.049 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031633: ['FBtr0077415', 'FBtr0336961'] 2021-10-25 09:36:45.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13960876, 13962219), (13961265, 13962219), (13962336, 13966754), (13965486, 13966754), (13965486, 13965604), (13965785, 13966754), (13966969, 13967029)] 2021-10-25 09:36:45.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.068 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4829979, 4830039), (4830400, 4830468)] 2021-10-25 09:36:45.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.183 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031634: ['FBtr0332480', 'FBtr0289979', 'FBtr0336959', 'FBtr0336960'] 2021-10-25 09:36:45.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013771: ['FBtr0300128'] 2021-10-25 09:36:45.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013771 has a single transcript. 2021-10-25 09:36:45.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013772: ['FBtr0087455'] 2021-10-25 09:36:45.266 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013772 has a single transcript. 2021-10-25 09:36:45.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013773: ['FBtr0087450', 'FBtr0339983', 'FBtr0345526'] 2021-10-25 09:36:45.277 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15947606, 15948807), (15947606, 15948163), (15947606, 15948004), (15948710, 15948807), (15948985, 15949040), (15949142, 15949203), (15949545, 15949605), (15950124, 15950190), (15950465, 15950607), (15950465, 15951157), (15951466, 15951871), (15951466, 15952347), (15951466, 15952835), (15951466, 15951906), (15951815, 15952835), (15953220, 15953425), (15953837, 15953901), (15954773, 15954832), (15954878, 15956638), (15956807, 15957808), (15957941, 15957993), (15959317, 15959788), (15959637, 15959788), (15959876, 15960244), (15960079, 15960244), (15960417, 15960480), (15961188, 15963036), (15961188, 15961312), (15962056, 15962116), (15962827, 15969075), (15964656, 15964811), (15965570, 15965747), (15966530, 15966593), (15984006, 15984073), (15984286, 15984653), (15984745, 15984882), (15985367, 15985473), (15985765, 15985861), (15985765, 15987569), (15986146, 15987132), (15987747, 15988893)] 2021-10-25 09:36:45.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4831361, 4831416), (4831932, 4832003), (4832596, 4832794), (4833040, 4833101), (4833216, 4833265), (4833704, 4833768), (4834044, 4834106), (4834256, 4834566), (4834256, 4834873), (4834972, 4835246)] 2021-10-25 09:36:45.309 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.309 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.387 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14871529, 14871637), (14872868, 14872935)] 2021-10-25 09:36:45.389 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.389 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031635: ['FBtr0077413', 'FBtr0077412'] 2021-10-25 09:36:45.525 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013799: ['FBtr0074882', 'FBtr0100666', 'FBtr0310476', 'FBtr0332153', 'FBtr0332726'] 2021-10-25 09:36:45.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4836244, 4836482), (4837157, 4837234), (4837533, 4837601), (4837639, 4837844), (4837779, 4837848)] 2021-10-25 09:36:45.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031636: ['FBtr0077385', 'FBtr0332476', 'FBtr0300756'] 2021-10-25 09:36:45.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19818666, 19819211), (19820001, 19828316), (19820010, 19828316), (19828945, 19829019)] 2021-10-25 09:36:45.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.673 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.701 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4838377, 4838991), (4838530, 4838991), (4839510, 4839576), (4840104, 4840163), (4840641, 4840694), (4840813, 4840883), (4840983, 4841135)] 2021-10-25 09:36:45.702 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4840883, 4841465, 'FBtr0077385_exon_6') contains intron (4840983, 4841135) 2021-10-25 09:36:45.702 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4840883, 4841465, 'FBtr0332476_exon_6') contains intron (4840983, 4841135) 2021-10-25 09:36:45.703 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077385_exon_6', 'FBtr0332476_exon_6'] 2021-10-25 09:36:45.703 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265046: ['FBtr0336639'] 2021-10-25 09:36:45.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265046 has a single transcript. 2021-10-25 09:36:45.836 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265047: ['FBtr0347563', 'FBtr0302230'] 2021-10-25 09:36:45.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031637: ['FBtr0077410', 'FBtr0077409', 'FBtr0077411', 'FBtr0332477', 'FBtr0332478', 'FBtr0332479', 'FBtr0300941'] 2021-10-25 09:36:45.889 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3022399, 3022551), (3022403, 3022551), (3023035, 3023506)] 2021-10-25 09:36:45.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:45.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:45.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013810: ['FBtr0304742'] 2021-10-25 09:36:45.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013810 has a single transcript. 2021-10-25 09:36:45.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013811: ['FBtr0303106'] 2021-10-25 09:36:45.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013811 has a single transcript. 2021-10-25 09:36:45.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013812: ['FBtr0273236', 'FBtr0336774'] 2021-10-25 09:36:45.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265048: ['FBtr0083189'] 2021-10-25 09:36:45.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265048 has a single transcript. 2021-10-25 09:36:45.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265049: ['FBtr0336657'] 2021-10-25 09:36:45.974 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265049 has a single transcript. 2021-10-25 09:36:45.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265050: ['FBtr0336660'] 2021-10-25 09:36:45.981 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265050 has a single transcript. 2021-10-25 09:36:45.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265051: ['FBtr0336661'] 2021-10-25 09:36:45.989 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265051 has a single transcript. 2021-10-25 09:36:45.998 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265052: ['FBtr0336678', 'FBtr0336679', 'FBtr0336680'] 2021-10-25 09:36:46.000 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21025183, 21025363), (21025496, 21026311), (21026460, 21026520), (21027522, 21027634), (21028049, 21028111), (21028428, 21028494), (21028665, 21028726), (21029237, 21029298), (21029796, 21029861), (21030031, 21030098), (21031328, 21031399), (21031519, 21031581), (21031738, 21031798), (21032160, 21032221), (21033045, 21033124), (21033477, 21033696), (21034409, 21034520), (21035567, 21035652), (21036594, 21037016), (21036594, 21036726), (21036756, 21037016), (21037289, 21037517), (21039094, 21039218), (21039670, 21039727), (21039993, 21040057), (21040340, 21040404), (21040646, 21040710), (21040922, 21040977), (21041130, 21041695)] 2021-10-25 09:36:46.003 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.003 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4842347, 4843539), (4843658, 4843717), (4844111, 4844168), (4844242, 4844308), (4844646, 4844711), (4844772, 4845086), (4844772, 4845253), (4845158, 4845253), (4845575, 4845641), (4846216, 4847238), (4846216, 4847163), (4846216, 4846715), (4846216, 4846278)] 2021-10-25 09:36:46.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0077410_exon_6') contains intron (4844242, 4844308) 2021-10-25 09:36:46.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0077409_exon_6') contains intron (4844242, 4844308) 2021-10-25 09:36:46.051 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0077411_exon_6') contains intron (4844242, 4844308) 2021-10-25 09:36:46.052 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0332477_exon_6') contains intron (4844242, 4844308) 2021-10-25 09:36:46.053 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0332478_exon_5') contains intron (4844242, 4844308) 2021-10-25 09:36:46.054 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4844168, 4844646, 'FBtr0300941_exon_6') contains intron (4844242, 4844308) 2021-10-25 09:36:46.054 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077410_exon_6', 'FBtr0077409_exon_6', 'FBtr0077411_exon_6', 'FBtr0332477_exon_6', 'FBtr0332478_exon_5', 'FBtr0300941_exon_6'] 2021-10-25 09:36:46.054 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23683665, 23683728), (23684186, 23684247), (23684320, 23684373), (23684511, 23686537), (23684511, 23684562), (23686877, 23687032), (23687164, 23687233), (23687316, 23687431)] 2021-10-25 09:36:46.083 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23684373, 23684654, 'FBtr0336679_exon_4') contains intron (23684511, 23684562) 2021-10-25 09:36:46.083 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336679_exon_4'] 2021-10-25 09:36:46.084 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013813: ['FBtr0301302', 'FBtr0301303', 'FBtr0337034'] 2021-10-25 09:36:46.204 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28488065, 28488751), (28488065, 28488192), (28488213, 28488751), (28488807, 28488930), (28489054, 28489178), (28489285, 28490034), (28490261, 28491088), (28491219, 28491358), (28491987, 28492356), (28492230, 28492356), (28492547, 28492731), (28493326, 28493378), (28493685, 28493740), (28494139, 28494201), (28495075, 28495135), (28495489, 28495558), (28495850, 28495927), (28496086, 28497215), (28497368, 28497775), (28497994, 28498065), (28498200, 28499456), (28499878, 28499931), (28500127, 28501120), (28501354, 28501765), (28501871, 28502244), (28502365, 28502709), (28503454, 28503507), (28504035, 28504522), (28504681, 28505066), (28505177, 28505819), (28506650, 28506769), (28506862, 28506924), (28507085, 28507166), (28507491, 28508914), (28509103, 28509158), (28509952, 28510013), (28510378, 28510441), (28512747, 28513416), (28513488, 28514197), (28514663, 28514747), (28514890, 28515124), (28515455, 28515520), (28515652, 28517244), (28517456, 28517784), (28517925, 28518079), (28518184, 28518388), (28518490, 28518642), (28518789, 28519171)] 2021-10-25 09:36:46.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265053: ['FBtr0336735'] 2021-10-25 09:36:46.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265053 has a single transcript. 2021-10-25 09:36:46.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265058: ['FBtr0336742', 'FBtr0336743'] 2021-10-25 09:36:46.279 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6873265, 6875981), (6875550, 6875981), (6876197, 6876272), (6876371, 6879657), (6879807, 6879858)] 2021-10-25 09:36:46.280 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.280 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265059: ['FBtr0336744'] 2021-10-25 09:36:46.356 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265059 has a single transcript. 2021-10-25 09:36:46.358 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013949: ['FBtr0084708', 'FBtr0084709', 'FBtr0334571'] 2021-10-25 09:36:46.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265060: ['FBtr0344617'] 2021-10-25 09:36:46.366 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265060 has a single transcript. 2021-10-25 09:36:46.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265061: ['FBtr0336875'] 2021-10-25 09:36:46.374 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265061 has a single transcript. 2021-10-25 09:36:46.382 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265062: ['FBtr0344589'] 2021-10-25 09:36:46.382 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265062 has a single transcript. 2021-10-25 09:36:46.389 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265063: ['FBtr0336793'] 2021-10-25 09:36:46.389 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265063 has a single transcript. 2021-10-25 09:36:46.397 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265064: ['FBtr0336791', 'FBtr0336792', 'FBtr0345277'] 2021-10-25 09:36:46.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031638: ['FBtr0077386'] 2021-10-25 09:36:46.399 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031638 has a single transcript. 2021-10-25 09:36:46.408 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031639: ['FBtr0077408'] 2021-10-25 09:36:46.408 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031639 has a single transcript. 2021-10-25 09:36:46.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031640: ['FBtr0077387'] 2021-10-25 09:36:46.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031640 has a single transcript. 2021-10-25 09:36:46.421 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031643: ['FBtr0077389'] 2021-10-25 09:36:46.421 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031643 has a single transcript. 2021-10-25 09:36:46.428 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031644: ['FBtr0077390'] 2021-10-25 09:36:46.428 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031644 has a single transcript. 2021-10-25 09:36:46.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031645: ['FBtr0077391', 'FBtr0336832'] 2021-10-25 09:36:46.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24865661, 24865721), (24865844, 24866011)] 2021-10-25 09:36:46.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24865349, 24865844, 'FBtr0084708_exon_1') contains intron (24865661, 24865721) 2021-10-25 09:36:46.446 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24865349, 24865844, 'FBtr0334571_exon_1') contains intron (24865661, 24865721) 2021-10-25 09:36:46.447 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084708_exon_1', 'FBtr0334571_exon_1'] 2021-10-25 09:36:46.447 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4892604, 4893934), (4893994, 4901401), (4901917, 4902024), (4902395, 4902460), (4902593, 4902663), (4902905, 4902973)] 2021-10-25 09:36:46.485 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19327219, 19327277), (19327223, 19327277), (19327223, 19327283), (19327378, 19327482), (19327401, 19327482)] 2021-10-25 09:36:46.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.486 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.486 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.487 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.556 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031646: ['FBtr0077403', 'FBtr0077401', 'FBtr0077402', 'FBtr0113021'] 2021-10-25 09:36:46.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013953: ['FBtr0084703', 'FBtr0304054'] 2021-10-25 09:36:46.616 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265065: ['FBtr0336796'] 2021-10-25 09:36:46.617 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265065 has a single transcript. 2021-10-25 09:36:46.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265066: ['FBtr0336795'] 2021-10-25 09:36:46.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265066 has a single transcript. 2021-10-25 09:36:46.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265067: ['FBtr0344590', 'FBtr0344591', 'FBtr0344592'] 2021-10-25 09:36:46.636 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24842470, 24847185), (24847376, 24848214), (24848462, 24848532), (24849304, 24849365), (24849668, 24849730)] 2021-10-25 09:36:46.638 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.638 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4904833, 4904892), (4904979, 4905752), (4905863, 4906663), (4905863, 4906698), (4905863, 4906713), (4905863, 4906635)] 2021-10-25 09:36:46.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013954: ['FBtr0086515'] 2021-10-25 09:36:46.719 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013954 has a single transcript. 2021-10-25 09:36:46.726 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21088946, 21094948), (21094888, 21094953), (21094888, 21094948)] 2021-10-25 09:36:46.728 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.728 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013972: ['FBtr0085453'] 2021-10-25 09:36:46.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013972 has a single transcript. 2021-10-25 09:36:46.738 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013973: ['FBtr0085753'] 2021-10-25 09:36:46.739 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0013973 has a single transcript. 2021-10-25 09:36:46.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013981: ['FBtr0082962', 'FBtr0082963', 'FBtr0082964', 'FBtr0334029'] 2021-10-25 09:36:46.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031649: ['FBtr0077394'] 2021-10-25 09:36:46.828 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031649 has a single transcript. 2021-10-25 09:36:46.837 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031650: ['FBtr0078990'] 2021-10-25 09:36:46.837 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031650 has a single transcript. 2021-10-25 09:36:46.844 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031651: ['FBtr0079058'] 2021-10-25 09:36:46.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031651 has a single transcript. 2021-10-25 09:36:46.851 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031652: ['FBtr0079057', 'FBtr0110896'] 2021-10-25 09:36:46.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265068: ['FBtr0336803'] 2021-10-25 09:36:46.868 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265068 has a single transcript. 2021-10-25 09:36:46.870 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14625815, 14626025), (14625917, 14626025), (14626229, 14626293)] 2021-10-25 09:36:46.871 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14625787, 14626229, 'FBtr0082964_exon_1') contains intron (14625815, 14626025) 2021-10-25 09:36:46.872 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082964_exon_1'] 2021-10-25 09:36:46.872 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265069: ['FBtr0336852'] 2021-10-25 09:36:46.884 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265069 has a single transcript. 2021-10-25 09:36:46.892 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265070: ['FBtr0336849'] 2021-10-25 09:36:46.892 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265070 has a single transcript. 2021-10-25 09:36:46.899 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265071: ['FBtr0336865'] 2021-10-25 09:36:46.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265071 has a single transcript. 2021-10-25 09:36:46.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265072: ['FBtr0336839'] 2021-10-25 09:36:46.907 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265072 has a single transcript. 2021-10-25 09:36:46.909 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4948559, 4948897), (4948771, 4948897)] 2021-10-25 09:36:46.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:46.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:46.914 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265073: ['FBtr0336845'] 2021-10-25 09:36:46.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265073 has a single transcript. 2021-10-25 09:36:46.921 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265074: ['FBtr0336836'] 2021-10-25 09:36:46.921 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265074 has a single transcript. 2021-10-25 09:36:46.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265075: ['FBtr0336837'] 2021-10-25 09:36:46.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265075 has a single transcript. 2021-10-25 09:36:46.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265076: ['FBtr0336826'] 2021-10-25 09:36:46.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265076 has a single transcript. 2021-10-25 09:36:46.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265077: ['FBtr0336827'] 2021-10-25 09:36:46.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265077 has a single transcript. 2021-10-25 09:36:46.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265078: ['FBtr0336815'] 2021-10-25 09:36:46.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265078 has a single transcript. 2021-10-25 09:36:46.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265079: ['FBtr0336821'] 2021-10-25 09:36:46.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265079 has a single transcript. 2021-10-25 09:36:46.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265080: ['FBtr0336816'] 2021-10-25 09:36:46.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265080 has a single transcript. 2021-10-25 09:36:46.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265081: ['FBtr0336807', 'FBtr0336808'] 2021-10-25 09:36:46.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031653: ['FBtr0079056'] 2021-10-25 09:36:46.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031653 has a single transcript. 2021-10-25 09:36:46.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031654: ['FBtr0079055', 'FBtr0345335'] 2021-10-25 09:36:47.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10052970, 10053021), (10052970, 10053029), (10053481, 10053727), (10053921, 10054003), (10054187, 10054251)] 2021-10-25 09:36:47.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10053727, 10054298, 'FBtr0336807_exon_1') contains intron (10053921, 10054003) 2021-10-25 09:36:47.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336807_exon_1'] 2021-10-25 09:36:47.030 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:47.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.049 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013983: ['FBtr0086725', 'FBtr0345891'] 2021-10-25 09:36:47.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265082: ['FBtr0336809', 'FBtr0336810', 'FBtr0336811', 'FBtr0336812'] 2021-10-25 09:36:47.119 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18410333, 18410750), (18411586, 18413455)] 2021-10-25 09:36:47.121 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.121 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031655: ['FBtr0078992'] 2021-10-25 09:36:47.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031655 has a single transcript. 2021-10-25 09:36:47.132 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031657: ['FBtr0078994'] 2021-10-25 09:36:47.132 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031657 has a single transcript. 2021-10-25 09:36:47.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031659: ['FBtr0078995'] 2021-10-25 09:36:47.139 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031659 has a single transcript. 2021-10-25 09:36:47.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031660: ['FBtr0078996', 'FBtr0331227'] 2021-10-25 09:36:47.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4974157, 4974276), (4975100, 4975152)] 2021-10-25 09:36:47.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013987: ['FBtr0070837', 'FBtr0070839', 'FBtr0302940', 'FBtr0308577'] 2021-10-25 09:36:47.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4911085, 4917396), (4918131, 4922591), (4922824, 4922946), (4923168, 4923233), (4923477, 4923531), (4923477, 4923543), (4923692, 4923753), (4923828, 4925545), (4925652, 4925893), (4926009, 4926075), (4926331, 4940674), (4926331, 4926786), (4932590, 4932729), (4941940, 4942301), (4942788, 4944974)] 2021-10-25 09:36:47.240 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.240 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031661: ['FBtr0079049'] 2021-10-25 09:36:47.281 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031661 has a single transcript. 2021-10-25 09:36:47.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031662: ['FBtr0078997'] 2021-10-25 09:36:47.292 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031662 has a single transcript. 2021-10-25 09:36:47.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031663: ['FBtr0079048'] 2021-10-25 09:36:47.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031663 has a single transcript. 2021-10-25 09:36:47.307 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031664: ['FBtr0079045', 'FBtr0079046', 'FBtr0331228', 'FBtr0306011'] 2021-10-25 09:36:47.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5760820, 5761168), (5761584, 5762100), (5762681, 5762782), (5762681, 5764093), (5762681, 5764068)] 2021-10-25 09:36:47.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.325 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.420 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4981284, 4981383), (4981379, 4981452)] 2021-10-25 09:36:47.421 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4979512, 4981587, 'FBtr0331228_exon_1') contains intron (4981284, 4981383) 2021-10-25 09:36:47.422 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331228_exon_1'] 2021-10-25 09:36:47.422 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.430 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265083: ['FBtr0336814', 'FBtr0344448'] 2021-10-25 09:36:47.483 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:47.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.485 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.518 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013995: ['FBtr0083998', 'FBtr0083999', 'FBtr0084000', 'FBtr0309202', 'FBtr0309203', 'FBtr0309204', 'FBtr0309205', 'FBtr0344316', 'FBtr0344317'] 2021-10-25 09:36:47.559 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265084: ['FBtr0336853'] 2021-10-25 09:36:47.560 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265084 has a single transcript. 2021-10-25 09:36:47.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265085: ['FBtr0336858'] 2021-10-25 09:36:47.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265085 has a single transcript. 2021-10-25 09:36:47.577 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265086: ['FBtr0336854'] 2021-10-25 09:36:47.577 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265086 has a single transcript. 2021-10-25 09:36:47.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265087: ['FBtr0336857'] 2021-10-25 09:36:47.585 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265087 has a single transcript. 2021-10-25 09:36:47.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265088: ['FBtr0336856'] 2021-10-25 09:36:47.592 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265088 has a single transcript. 2021-10-25 09:36:47.599 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265089: ['FBtr0076701'] 2021-10-25 09:36:47.601 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265089 has a single transcript. 2021-10-25 09:36:47.602 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031668: ['FBtr0079037'] 2021-10-25 09:36:47.603 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031668 has a single transcript. 2021-10-25 09:36:47.607 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265095: ['FBtr0336881'] 2021-10-25 09:36:47.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265095 has a single transcript. 2021-10-25 09:36:47.613 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031670: ['FBtr0079000', 'FBtr0332411', 'FBtr0332412'] 2021-10-25 09:36:47.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265096: ['FBtr0336910'] 2021-10-25 09:36:47.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265096 has a single transcript. 2021-10-25 09:36:47.622 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265097: ['FBtr0344614'] 2021-10-25 09:36:47.622 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265097 has a single transcript. 2021-10-25 09:36:47.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265098: ['FBtr0336914'] 2021-10-25 09:36:47.629 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265098 has a single transcript. 2021-10-25 09:36:47.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265099: ['FBtr0344615'] 2021-10-25 09:36:47.636 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265099 has a single transcript. 2021-10-25 09:36:47.643 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265101: ['FBtr0081862'] 2021-10-25 09:36:47.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265101 has a single transcript. 2021-10-25 09:36:47.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265102: ['FBtr0076663', 'FBtr0345038'] 2021-10-25 09:36:47.686 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5011131, 5011183), (5011335, 5011411)] 2021-10-25 09:36:47.687 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5011091, 5011335, 'FBtr0079000_exon_1') contains intron (5011131, 5011183) 2021-10-25 09:36:47.688 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5010921, 5011335, 'FBtr0332412_exon_1') contains intron (5011131, 5011183) 2021-10-25 09:36:47.688 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0079000_exon_1', 'FBtr0332412_exon_1'] 2021-10-25 09:36:47.688 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.702 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8407466, 8407521), (8407799, 8407855), (8408012, 8408070), (8408191, 8408252), (8408453, 8408510), (8408658, 8408711), (8408986, 8409044), (8409527, 8409588), (8411043, 8411114), (8411345, 8411428), (8411867, 8412046)] 2021-10-25 09:36:47.704 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.704 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.777 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265103: ['FBtr0344698'] 2021-10-25 09:36:47.777 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265103 has a single transcript. 2021-10-25 09:36:47.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265104: ['FBtr0346953', 'FBtr0346709'] 2021-10-25 09:36:47.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20978248, 20992240), (20979120, 20992240), (20986083, 20992240), (20986083, 20986146), (20986382, 20992240), (20989599, 20992240), (20990232, 20992240), (20990232, 20991574), (20991680, 20992240), (20994423, 21008148), (21008240, 21008721), (21008240, 21010585), (21008240, 21011266), (21008240, 21009475), (21008736, 21011266), (21008736, 21011281), (21009514, 21011266), (21009514, 21010585), (21010150, 21011266), (21010615, 21011266), (21011415, 21011924), (21012024, 21012090), (21012210, 21012266), (21012425, 21012493), (21012665, 21012890)] 2021-10-25 09:36:47.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.823 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031673: ['FBtr0079033', 'FBtr0079034', 'FBtr0079035', 'FBtr0301905', 'FBtr0301906', 'FBtr0301907', 'FBtr0333539'] 2021-10-25 09:36:47.842 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13330954, 13336951), (13337348, 13344500)] 2021-10-25 09:36:47.843 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.843 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:47.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265105: ['FBtr0336931', 'FBtr0336932'] 2021-10-25 09:36:47.988 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9775333, 9775394), (9775337, 9775394)] 2021-10-25 09:36:47.989 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:47.989 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.031 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5041539, 5041688), (5041539, 5041697), (5041836, 5042490), (5042884, 5043077), (5042887, 5043077), (5042890, 5044538), (5042890, 5042960), (5042890, 5043801), (5042890, 5043077), (5042890, 5042983)] 2021-10-25 09:36:48.033 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.033 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265106: ['FBtr0336933', 'FBtr0336934'] 2021-10-25 09:36:48.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9788605, 9788667)] 2021-10-25 09:36:48.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.130 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265107: ['FBtr0336938'] 2021-10-25 09:36:48.209 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265107 has a single transcript. 2021-10-25 09:36:48.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265137: ['FBtr0086196', 'FBtr0086197', 'FBtr0086198', 'FBtr0086199', 'FBtr0086200', 'FBtr0086201', 'FBtr0086202', 'FBtr0086203', 'FBtr0086204', 'FBtr0086205', 'FBtr0300336'] 2021-10-25 09:36:48.322 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0013997: ['FBtr0075998', 'FBtr0075999'] 2021-10-25 09:36:48.382 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12146960, 12148791), (12148908, 12151819), (12148908, 12151210), (12151407, 12152176), (12152016, 12152176), (12152318, 12152379), (12153558, 12153622), (12153748, 12153950), (12154154, 12154213), (12155143, 12155202), (12155382, 12155445), (12155790, 12155854), (12155992, 12156050)] 2021-10-25 09:36:48.384 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.384 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.388 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031675: ['FBtr0079032', 'FBtr0301206', 'FBtr0345751', 'FBtr0333538'] 2021-10-25 09:36:48.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014000: ['FBtr0081306'] 2021-10-25 09:36:48.470 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014000 has a single transcript. 2021-10-25 09:36:48.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014002: ['FBtr0075648', 'FBtr0346644'] 2021-10-25 09:36:48.504 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5048719, 5048790), (5050017, 5050128), (5050017, 5050657), (5050017, 5050955), (5050248, 5050657)] 2021-10-25 09:36:48.506 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.507 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15139524, 15142299)] 2021-10-25 09:36:48.535 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.536 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.558 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6876118, 6877220), (6876431, 6876526), (6876526, 6877220), (6876526, 6876595), (6876733, 6877220), (6877122, 6877220), (6877362, 6877426), (6878358, 6878844), (6878358, 6878438)] 2021-10-25 09:36:48.560 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876152, 6876526, 'FBtr0086198_exon_4') contains intron (6876431, 6876526) 2021-10-25 09:36:48.560 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876526, 6876733, 'FBtr0086199_exon_4') contains intron (6876526, 6876595) 2021-10-25 09:36:48.561 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876152, 6876526, 'FBtr0086200_exon_5') contains intron (6876431, 6876526) 2021-10-25 09:36:48.561 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876152, 6876526, 'FBtr0086201_exon_4') contains intron (6876431, 6876526) 2021-10-25 09:36:48.562 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876526, 6876733, 'FBtr0086202_exon_4') contains intron (6876526, 6876595) 2021-10-25 09:36:48.563 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876152, 6876526, 'FBtr0086205_exon_5') contains intron (6876431, 6876526) 2021-10-25 09:36:48.563 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6876152, 6876526, 'FBtr0300336_exon_4') contains intron (6876431, 6876526) 2021-10-25 09:36:48.564 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6877426, 6878927, 'FBtr0300336_exon_1') contains intron (6878358, 6878844) 2021-10-25 09:36:48.564 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086198_exon_4', 'FBtr0086199_exon_4', 'FBtr0086200_exon_5', 'FBtr0086201_exon_4', 'FBtr0086202_exon_4', 'FBtr0086205_exon_5', 'FBtr0300336_exon_4', 'FBtr0300336_exon_1'] 2021-10-25 09:36:48.564 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.612 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014006: ['FBtr0083819', 'FBtr0300256'] 2021-10-25 09:36:48.672 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19880043, 19880115), (19880310, 19880882), (19881061, 19881483), (19882381, 19882437), (19882776, 19882842), (19883645, 19883708), (19883855, 19884195), (19885095, 19885155), (19885428, 19885493)] 2021-10-25 09:36:48.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19880115, 19881061, 'FBtr0083819_exon_2') contains intron (19880310, 19880882) 2021-10-25 09:36:48.674 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083819_exon_2'] 2021-10-25 09:36:48.675 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031676: ['FBtr0079009'] 2021-10-25 09:36:48.685 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031676 has a single transcript. 2021-10-25 09:36:48.694 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031677: ['FBtr0079029'] 2021-10-25 09:36:48.694 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031677 has a single transcript. 2021-10-25 09:36:48.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031678: ['FBtr0079028'] 2021-10-25 09:36:48.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031678 has a single transcript. 2021-10-25 09:36:48.711 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031681: ['FBtr0111024', 'FBtr0079026'] 2021-10-25 09:36:48.761 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014007: ['FBtr0075913', 'FBtr0075914'] 2021-10-25 09:36:48.767 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5074029, 5074091), (5074325, 5074389), (5074529, 5077076), (5074529, 5075648), (5075829, 5077534), (5077257, 5077534), (5077712, 5077773), (5078092, 5078233), (5078400, 5078461), (5079574, 5093444), (5079574, 5092874), (5092898, 5093444)] 2021-10-25 09:36:48.768 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.769 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.819 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12735249, 12736057), (12736160, 12736252), (12738096, 12738155), (12738401, 12738459), (12738703, 12738771), (12738703, 12738774), (12739666, 12739725), (12739872, 12739928), (12740039, 12740108), (12740288, 12740352), (12740660, 12740721), (12740857, 12740919)] 2021-10-25 09:36:48.820 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.820 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.842 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031682: ['FBtr0079018', 'FBtr0329981'] 2021-10-25 09:36:48.890 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:48.891 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014009: ['FBtr0086124', 'FBtr0336658'] 2021-10-25 09:36:48.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6696929, 6697415), (6697575, 6698048), (6698385, 6698445)] 2021-10-25 09:36:48.957 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:48.958 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:48.974 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031683: ['FBtr0079019', 'FBtr0329982', 'FBtr0329983'] 2021-10-25 09:36:49.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014010: ['FBtr0077798', 'FBtr0077793', 'FBtr0077794', 'FBtr0077795', 'FBtr0077796', 'FBtr0077797', 'FBtr0330668', 'FBtr0330669', 'FBtr0330670'] 2021-10-25 09:36:49.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5096700, 5097035), (5096700, 5097032), (5097226, 5097536), (5097235, 5097536), (5097651, 5097709), (5098034, 5098093)] 2021-10-25 09:36:49.056 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.056 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265138: ['FBtr0077899'] 2021-10-25 09:36:49.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265138 has a single transcript. 2021-10-25 09:36:49.126 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265139: ['FBtr0114515', 'FBtr0300224'] 2021-10-25 09:36:49.183 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1452591, 1452662), (1453686, 1453752), (1453821, 1453875), (1453965, 1454014)] 2021-10-25 09:36:49.184 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1453752, 1453965, 'FBtr0300224_exon_3') contains intron (1453821, 1453875) 2021-10-25 09:36:49.185 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300224_exon_3'] 2021-10-25 09:36:49.185 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.185 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031684: ['FBtr0079025', 'FBtr0345333', 'FBtr0345334'] 2021-10-25 09:36:49.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265140: ['FBtr0301498', 'FBtr0301499'] 2021-10-25 09:36:49.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5099673, 5099736), (5099913, 5100009)] 2021-10-25 09:36:49.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2360393, 2360459), (2360393, 2360455), (2360569, 2360632), (2360801, 2360971), (2361092, 2361159), (2361585, 2364312), (2361585, 2365060), (2361585, 2364594), (2361585, 2364889), (2361585, 2363404), (2361585, 2362674), (2361585, 2361738), (2361585, 2364836), (2361585, 2364640)] 2021-10-25 09:36:49.319 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.319 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.329 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14667655, 14668865), (14668995, 14669056), (14670419, 14670499), (14670842, 14671371), (14671523, 14671608), (14671803, 14672422), (14672523, 14696484)] 2021-10-25 09:36:49.331 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.331 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.402 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265141: ['FBtr0336973'] 2021-10-25 09:36:49.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265141 has a single transcript. 2021-10-25 09:36:49.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031688: ['FBtr0079061'] 2021-10-25 09:36:49.405 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031688 has a single transcript. 2021-10-25 09:36:49.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265142: ['FBtr0336979'] 2021-10-25 09:36:49.412 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265142 has a single transcript. 2021-10-25 09:36:49.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031689: ['FBtr0079062'] 2021-10-25 09:36:49.415 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031689 has a single transcript. 2021-10-25 09:36:49.419 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265143: ['FBtr0336982'] 2021-10-25 09:36:49.419 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265143 has a single transcript. 2021-10-25 09:36:49.425 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031690: ['FBtr0079092', 'FBtr0346461', 'FBtr0342940', 'FBtr0342941'] 2021-10-25 09:36:49.426 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265144: ['FBtr0336980'] 2021-10-25 09:36:49.426 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265144 has a single transcript. 2021-10-25 09:36:49.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265145: ['FBtr0344610'] 2021-10-25 09:36:49.435 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265145 has a single transcript. 2021-10-25 09:36:49.442 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265146: ['FBtr0452094', 'FBtr0452095'] 2021-10-25 09:36:49.496 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:49.497 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.498 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5212662, 5212714), (5212796, 5212862), (5213332, 5213387), (5213640, 5213689), (5213783, 5213836), (5214023, 5214085), (5214023, 5214316)] 2021-10-25 09:36:49.545 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.545 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265147: ['FBtr0344021', 'FBtr0336992'] 2021-10-25 09:36:49.641 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14241098, 14241156), (14241314, 14241366)] 2021-10-25 09:36:49.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265148: ['FBtr0336991'] 2021-10-25 09:36:49.717 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265148 has a single transcript. 2021-10-25 09:36:49.727 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265149: ['FBtr0336987'] 2021-10-25 09:36:49.727 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265149 has a single transcript. 2021-10-25 09:36:49.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265150: ['FBtr0336988'] 2021-10-25 09:36:49.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265150 has a single transcript. 2021-10-25 09:36:49.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265151: ['FBtr0336984'] 2021-10-25 09:36:49.742 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265151 has a single transcript. 2021-10-25 09:36:49.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031692: ['FBtr0079063', 'FBtr0346458', 'FBtr0342931'] 2021-10-25 09:36:49.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265152: ['FBtr0336986'] 2021-10-25 09:36:49.750 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265152 has a single transcript. 2021-10-25 09:36:49.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265153: ['FBtr0336985'] 2021-10-25 09:36:49.757 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265153 has a single transcript. 2021-10-25 09:36:49.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265154: ['FBtr0336995'] 2021-10-25 09:36:49.765 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265154 has a single transcript. 2021-10-25 09:36:49.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265155: ['FBtr0337005'] 2021-10-25 09:36:49.773 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265155 has a single transcript. 2021-10-25 09:36:49.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265156: ['FBtr0337070'] 2021-10-25 09:36:49.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265156 has a single transcript. 2021-10-25 09:36:49.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265157: ['FBtr0337068'] 2021-10-25 09:36:49.788 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265157 has a single transcript. 2021-10-25 09:36:49.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265158: ['FBtr0337075'] 2021-10-25 09:36:49.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265158 has a single transcript. 2021-10-25 09:36:49.799 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014011: ['FBtr0076867', 'FBtr0332800'] 2021-10-25 09:36:49.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265159: ['FBtr0337076'] 2021-10-25 09:36:49.803 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265159 has a single transcript. 2021-10-25 09:36:49.810 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265160: ['FBtr0344593'] 2021-10-25 09:36:49.811 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265160 has a single transcript. 2021-10-25 09:36:49.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265161: ['FBtr0337078'] 2021-10-25 09:36:49.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265161 has a single transcript. 2021-10-25 09:36:49.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265162: ['FBtr0337083'] 2021-10-25 09:36:49.824 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265162 has a single transcript. 2021-10-25 09:36:49.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265163: ['FBtr0337084', 'FBtr0337085'] 2021-10-25 09:36:49.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5216843, 5218446), (5218353, 5218446), (5218864, 5218926)] 2021-10-25 09:36:49.836 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.852 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:49.853 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.853 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.882 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12767812, 12768120)] 2021-10-25 09:36:49.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:49.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:49.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014018: ['FBtr0089340', 'FBtr0089341', 'FBtr0089339', 'FBtr0089338'] 2021-10-25 09:36:49.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265164: ['FBtr0337086'] 2021-10-25 09:36:49.956 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265164 has a single transcript. 2021-10-25 09:36:49.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265165: ['FBtr0337092'] 2021-10-25 09:36:49.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265165 has a single transcript. 2021-10-25 09:36:49.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031693: ['FBtr0079066'] 2021-10-25 09:36:49.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031693 has a single transcript. 2021-10-25 09:36:49.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265166: ['FBtr0337090'] 2021-10-25 09:36:49.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265166 has a single transcript. 2021-10-25 09:36:49.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031694: ['FBtr0300456'] 2021-10-25 09:36:49.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031694 has a single transcript. 2021-10-25 09:36:49.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265167: ['FBtr0337089'] 2021-10-25 09:36:49.980 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265167 has a single transcript. 2021-10-25 09:36:49.986 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031695: ['FBtr0079068'] 2021-10-25 09:36:49.986 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0031695 has a single transcript. 2021-10-25 09:36:49.987 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265168: ['FBtr0337098'] 2021-10-25 09:36:49.987 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265168 has a single transcript. 2021-10-25 09:36:49.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031696: ['FBtr0079069', 'FBtr0346455', 'FBtr0342934'] 2021-10-25 09:36:49.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265169: ['FBtr0337099'] 2021-10-25 09:36:49.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265169 has a single transcript. 2021-10-25 09:36:50.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265174: ['FBtr0339071', 'FBtr0339072', 'FBtr0339073'] 2021-10-25 09:36:50.049 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9046227, 9046523)] 2021-10-25 09:36:50.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.051 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.072 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5280271, 5280327), (5281989, 5282073)] 2021-10-25 09:36:50.074 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.074 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16955561, 16955632), (16955677, 16955737)] 2021-10-25 09:36:50.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16955457, 16955677, 'FBtr0339071_exon_1') contains intron (16955561, 16955632) 2021-10-25 09:36:50.087 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16955457, 16957308, 'FBtr0339072_exon_1') contains intron (16955561, 16955632) 2021-10-25 09:36:50.088 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16955632, 16957308, 'FBtr0339073_exon_2') contains intron (16955677, 16955737) 2021-10-25 09:36:50.088 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339071_exon_1', 'FBtr0339072_exon_1', 'FBtr0339073_exon_2'] 2021-10-25 09:36:50.088 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031697: ['FBtr0079082', 'FBtr0329970'] 2021-10-25 09:36:50.213 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265176: ['FBtr0339083'] 2021-10-25 09:36:50.214 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265176 has a single transcript. 2021-10-25 09:36:50.223 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265177: ['FBtr0339084', 'FBtr0339085'] 2021-10-25 09:36:50.230 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014019: ['FBtr0080291', 'FBtr0342591'] 2021-10-25 09:36:50.259 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5313091, 5313268), (5313324, 5313387), (5313949, 5314678)] 2021-10-25 09:36:50.260 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.260 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.270 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16196572, 16196691), (16196602, 16196691)] 2021-10-25 09:36:50.271 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.271 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.288 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12008684, 12008742), (12009089, 12009139)] 2021-10-25 09:36:50.290 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.290 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0031698: ['FBtr0307040', 'FBtr0307041', 'FBtr0329969'] 2021-10-25 09:36:50.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265178: ['FBtr0339086', 'FBtr0339087'] 2021-10-25 09:36:50.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014020: ['FBtr0087212', 'FBtr0087213', 'FBtr0087214', 'FBtr0087216', 'FBtr0087217', 'FBtr0087211'] 2021-10-25 09:36:50.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16198338, 16198484), (16198946, 16199006)] 2021-10-25 09:36:50.402 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.402 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.407 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5317874, 5317932), (5318436, 5318510), (5323229, 5323346), (5324663, 5324725), (5324906, 5325951), (5324909, 5325951)] 2021-10-25 09:36:50.409 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.409 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265180: ['FBtr0339094', 'FBtr0339095'] 2021-10-25 09:36:50.542 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21200658, 21211242), (21212478, 21212545)] 2021-10-25 09:36:50.543 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.543 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16102820, 16103610), (16102892, 16103610), (16102949, 16103610), (16103308, 16103610), (16103774, 16105032), (16105182, 16105716), (16105797, 16105859)] 2021-10-25 09:36:50.556 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.609 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265182: ['FBtr0339097', 'FBtr0339098'] 2021-10-25 09:36:50.660 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24877297, 24878138), (24879102, 24879163)] 2021-10-25 09:36:50.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.662 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.734 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265184: ['FBtr0339103'] 2021-10-25 09:36:50.735 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265184 has a single transcript. 2021-10-25 09:36:50.748 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265185: ['FBtr0339104', 'FBtr0339105'] 2021-10-25 09:36:50.800 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12951349, 12951845), (12951349, 12952172), (12951878, 12952172)] 2021-10-25 09:36:50.801 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.802 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014022: ['FBtr0082062'] 2021-10-25 09:36:50.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014022 has a single transcript. 2021-10-25 09:36:50.862 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014023: ['FBtr0082121'] 2021-10-25 09:36:50.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014023 has a single transcript. 2021-10-25 09:36:50.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265186: ['FBtr0339106', 'FBtr0339107'] 2021-10-25 09:36:50.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014024: ['FBtr0070753', 'FBtr0070752', 'FBtr0112876', 'FBtr0340477'] 2021-10-25 09:36:50.920 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12950086, 12950152), (12950086, 12952172)] 2021-10-25 09:36:50.921 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:50.921 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:50.991 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5319582, 5319653), (5319756, 5319812), (5319933, 5319997), (5320504, 5320558), (5321503, 5321561), (5321737, 5321818), (5322327, 5322389), (5322453, 5322630), (5322549, 5322630)] 2021-10-25 09:36:50.993 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5322389, 5322696, 'FBtr0070752_exon_1') contains intron (5322453, 5322630) 2021-10-25 09:36:50.994 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070752_exon_1'] 2021-10-25 09:36:50.994 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.000 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265187: ['FBtr0339108', 'FBtr0339109', 'FBtr0339110'] 2021-10-25 09:36:51.075 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23055579, 23057408), (23055673, 23057408), (23057633, 23059054), (23058465, 23059054), (23059293, 23059351), (23059996, 23060055), (23060257, 23060315)] 2021-10-25 09:36:51.077 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.077 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014026: ['FBtr0070915', 'FBtr0070916', 'FBtr0343328', 'FBtr0343329', 'FBtr0345293'] 2021-10-25 09:36:51.201 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265188: ['FBtr0339111'] 2021-10-25 09:36:51.202 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265188 has a single transcript. 2021-10-25 09:36:51.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265189: ['FBtr0339113'] 2021-10-25 09:36:51.211 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265189 has a single transcript. 2021-10-25 09:36:51.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265190: ['FBtr0339112'] 2021-10-25 09:36:51.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265190 has a single transcript. 2021-10-25 09:36:51.228 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265191: ['FBtr0339088', 'FBtr0339089', 'FBtr0339090', 'FBtr0339091', 'FBtr0339092', 'FBtr0339093'] 2021-10-25 09:36:51.325 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6531431, 6531834), (6532205, 6532297), (6532421, 6532489), (6532545, 6533123), (6533161, 6533229)] 2021-10-25 09:36:51.327 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (6533123, 6533256, 'FBtr0070916_exon_1') contains intron (6533161, 6533229) 2021-10-25 09:36:51.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070916_exon_1'] 2021-10-25 09:36:51.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.395 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21200658, 21204612), (21203567, 21204612), (21204923, 21205009), (21205299, 21205360), (21205541, 21208469), (21205541, 21205745), (21205541, 21206876), (21205814, 21208469), (21205814, 21206876), (21207512, 21208469), (21208671, 21209971), (21208671, 21210182)] 2021-10-25 09:36:51.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.397 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014028: ['FBtr0086156'] 2021-10-25 09:36:51.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014028 has a single transcript. 2021-10-25 09:36:51.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014029: ['FBtr0083945', 'FBtr0334579'] 2021-10-25 09:36:51.602 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20587457, 20587869), (20587457, 20588123), (20587995, 20588123)] 2021-10-25 09:36:51.603 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.604 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265192: ['FBtr0339099', 'FBtr0339100', 'FBtr0339101', 'FBtr0339102'] 2021-10-25 09:36:51.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014031: ['FBtr0070913'] 2021-10-25 09:36:51.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014031 has a single transcript. 2021-10-25 09:36:51.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014032: ['FBtr0071241'] 2021-10-25 09:36:51.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014032 has a single transcript. 2021-10-25 09:36:51.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014033: ['FBtr0077467', 'FBtr0346582'] 2021-10-25 09:36:51.752 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22061260, 22068426), (22061581, 22068426), (22067282, 22068426), (22068671, 22068735)] 2021-10-25 09:36:51.753 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4121979, 4122045), (4122583, 4122708), (4123478, 4123537)] 2021-10-25 09:36:51.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.754 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.754 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014037: ['FBtr0074920', 'FBtr0302047', 'FBtr0344257'] 2021-10-25 09:36:51.903 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19895038, 19896797), (19896847, 19896911), (19897259, 19897317), (19897408, 19909197), (19897408, 19909246), (19897413, 19909246)] 2021-10-25 09:36:51.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:51.905 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:51.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265193: ['FBtr0339096'] 2021-10-25 09:36:51.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265193 has a single transcript. 2021-10-25 09:36:51.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265194: ['FBtr0339074', 'FBtr0339075', 'FBtr0339076', 'FBtr0339077', 'FBtr0339078', 'FBtr0339079', 'FBtr0339080', 'FBtr0339081', 'FBtr0339082'] 2021-10-25 09:36:52.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014073: ['FBtr0073323'] 2021-10-25 09:36:52.029 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014073 has a single transcript. 2021-10-25 09:36:52.038 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014075: ['FBtr0075064'] 2021-10-25 09:36:52.038 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014075 has a single transcript. 2021-10-25 09:36:52.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014076: ['FBtr0080216', 'FBtr0343618'] 2021-10-25 09:36:52.100 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:52.101 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:52.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.173 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014092: ['FBtr0080834'] 2021-10-25 09:36:52.174 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014092 has a single transcript. 2021-10-25 09:36:52.186 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014127: ['FBtr0081348', 'FBtr0081349', 'FBtr0343850'] 2021-10-25 09:36:52.226 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15264757, 15264818), (15264976, 15265222), (15264976, 15265630), (15265360, 15265630), (15265837, 15265944), (15266329, 15266691), (15266970, 15267229), (15267462, 15267841), (15267965, 15268082), (15268204, 15268284), (15268384, 15269532), (15268384, 15270297), (15269757, 15270297), (15270443, 15270630), (15270821, 15271010), (15271168, 15271389), (15271539, 15272551), (15271539, 15274538), (15272608, 15274538), (15272608, 15274219), (15272608, 15273325), (15273388, 15274538), (15274294, 15274538), (15274691, 15274755), (15274967, 15275040), (15275230, 15275293), (15275486, 15277675), (15277777, 15277886), (15278043, 15278129), (15278316, 15279246), (15279394, 15279767), (15279924, 15280906), (15281043, 15281218), (15281378, 15282405), (15282478, 15282640), (15282781, 15282850), (15283013, 15284883), (15284966, 15290928), (15284966, 15293426), (15284966, 15286137), (15284966, 15292772), (15284966, 15287353), (15287410, 15292772), (15292969, 15293426), (15293561, 15306877), (15307154, 15309195), (15307154, 15308841), (15307298, 15309195), (15307298, 15308841)] 2021-10-25 09:36:52.229 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15267229, 15267965, 'FBtr0339075_exon_24') contains intron (15267462, 15267841) 2021-10-25 09:36:52.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339075_exon_24'] 2021-10-25 09:36:52.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.266 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20058729, 20058801), (20060352, 20060411), (20060724, 20060828), (20061016, 20061185)] 2021-10-25 09:36:52.267 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20060411, 20060977, 'FBtr0081349_exon_1') contains intron (20060724, 20060828) 2021-10-25 09:36:52.268 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20060411, 20061016, 'FBtr0343850_exon_2') contains intron (20060724, 20060828) 2021-10-25 09:36:52.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081349_exon_1', 'FBtr0343850_exon_2'] 2021-10-25 09:36:52.268 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.400 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014133: ['FBtr0073526', 'FBtr0073527', 'FBtr0334463', 'FBtr0334464', 'FBtr0334465'] 2021-10-25 09:36:52.538 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11679289, 11680843), (11681114, 11681717), (11684254, 11687461), (11684254, 11689200), (11687635, 11689200), (11689543, 11692798), (11689543, 11690811), (11689543, 11693546), (11693177, 11693546)] 2021-10-25 09:36:52.540 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11689200, 11694740, 'FBtr0334464_exon_5') contains intron (11689543, 11692798) 2021-10-25 09:36:52.541 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11690811, 11694740, 'FBtr0334465_exon_6') contains intron (11693177, 11693546) 2021-10-25 09:36:52.541 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0334464_exon_5', 'FBtr0334465_exon_6'] 2021-10-25 09:36:52.541 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.700 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265196: ['FBtr0339169'] 2021-10-25 09:36:52.700 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265196 has a single transcript. 2021-10-25 09:36:52.707 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265197: ['FBtr0339171'] 2021-10-25 09:36:52.708 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265197 has a single transcript. 2021-10-25 09:36:52.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265198: ['FBtr0339172'] 2021-10-25 09:36:52.715 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265198 has a single transcript. 2021-10-25 09:36:52.721 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265199: ['FBtr0339174'] 2021-10-25 09:36:52.721 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265199 has a single transcript. 2021-10-25 09:36:52.729 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265200: ['FBtr0339178'] 2021-10-25 09:36:52.729 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265200 has a single transcript. 2021-10-25 09:36:52.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265201: ['FBtr0339175'] 2021-10-25 09:36:52.740 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265201 has a single transcript. 2021-10-25 09:36:52.746 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265202: ['FBtr0339184'] 2021-10-25 09:36:52.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265202 has a single transcript. 2021-10-25 09:36:52.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265203: ['FBtr0339186', 'FBtr0339187'] 2021-10-25 09:36:52.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014135: ['FBtr0083795', 'FBtr0300123', 'FBtr0344549'] 2021-10-25 09:36:52.803 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31758886, 31758962)] 2021-10-25 09:36:52.804 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:52.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19794336, 19795074), (19794336, 19796213), (19795515, 19796213), (19797532, 19800397), (19800501, 19827653), (19829042, 19836261)] 2021-10-25 09:36:52.879 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:52.879 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265204: ['FBtr0339191'] 2021-10-25 09:36:52.879 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265204 has a single transcript. 2021-10-25 09:36:52.879 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:52.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265205: ['FBtr0344338', 'FBtr0339196'] 2021-10-25 09:36:52.943 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21224067, 21224188)] 2021-10-25 09:36:52.945 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:52.945 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.019 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265252: ['FBtr0339228'] 2021-10-25 09:36:53.020 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265252 has a single transcript. 2021-10-25 09:36:53.026 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014141: ['FBtr0089473', 'FBtr0089471', 'FBtr0303364', 'FBtr0332167', 'FBtr0290013', 'FBtr0290014', 'FBtr0290015', 'FBtr0337100', 'FBtr0337101', 'FBtr0337102'] 2021-10-25 09:36:53.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265253: ['FBtr0339230'] 2021-10-25 09:36:53.031 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265253 has a single transcript. 2021-10-25 09:36:53.039 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265254: ['FBtr0339231'] 2021-10-25 09:36:53.039 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265254 has a single transcript. 2021-10-25 09:36:53.046 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265255: ['FBtr0339229', 'FBtr0345311'] 2021-10-25 09:36:53.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21798951, 21799020)] 2021-10-25 09:36:53.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.170 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265256: ['FBtr0339236'] 2021-10-25 09:36:53.170 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265256 has a single transcript. 2021-10-25 09:36:53.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265257: ['FBtr0339238'] 2021-10-25 09:36:53.178 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265257 has a single transcript. 2021-10-25 09:36:53.191 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265262: ['FBtr0080429', 'FBtr0336618'] 2021-10-25 09:36:53.247 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13001504, 13001559), (13002537, 13002622), (13003320, 13003583), (13003715, 13003973), (13003715, 13004040)] 2021-10-25 09:36:53.248 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.249 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.326 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265263: ['FBtr0302890', 'FBtr0332576'] 2021-10-25 09:36:53.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17092224, 17092286), (17094318, 17094375), (17094545, 17094608), (17094749, 17095363), (17094749, 17098037), (17094749, 17100987), (17094749, 17098561), (17098258, 17098561), (17098358, 17098561), (17101078, 17101351), (17101432, 17104255), (17104391, 17104456), (17104909, 17105008), (17105813, 17106279), (17105813, 17106953), (17106846, 17106953), (17107340, 17107398), (17108691, 17108747), (17108839, 17109707), (17108839, 17110213), (17109722, 17110213), (17110549, 17110609), (17110754, 17116940), (17117301, 17118736), (17117301, 17122397), (17119154, 17125212)] 2021-10-25 09:36:53.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.393 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19182515, 19182576)] 2021-10-25 09:36:53.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.474 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265264: ['FBtr0080101'] 2021-10-25 09:36:53.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265264 has a single transcript. 2021-10-25 09:36:53.484 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265265: ['FBtr0071056'] 2021-10-25 09:36:53.485 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265265 has a single transcript. 2021-10-25 09:36:53.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265266: ['FBtr0306105'] 2021-10-25 09:36:53.492 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265266 has a single transcript. 2021-10-25 09:36:53.499 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265267: ['FBtr0074392'] 2021-10-25 09:36:53.499 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265267 has a single transcript. 2021-10-25 09:36:53.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265268: ['FBtr0300049'] 2021-10-25 09:36:53.506 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265268 has a single transcript. 2021-10-25 09:36:53.513 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265269: ['FBtr0077471'] 2021-10-25 09:36:53.514 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265269 has a single transcript. 2021-10-25 09:36:53.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265270: ['FBtr0339798', 'FBtr0306294', 'FBtr0345642'] 2021-10-25 09:36:53.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17354452, 17354517), (17354452, 17354522)] 2021-10-25 09:36:53.600 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.715 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265271: ['FBtr0082425', 'FBtr0335209'] 2021-10-25 09:36:53.777 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:53.778 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.778 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:53.857 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265272: ['FBtr0087714'] 2021-10-25 09:36:53.858 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265272 has a single transcript. 2021-10-25 09:36:53.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265274: ['FBtr0085350', 'FBtr0330306', 'FBtr0345207'] 2021-10-25 09:36:53.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014143: ['FBtr0078395'] 2021-10-25 09:36:53.889 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014143 has a single transcript. 2021-10-25 09:36:53.901 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014163: ['FBtr0100478', 'FBtr0100477', 'FBtr0075412', 'FBtr0075413', 'FBtr0331175', 'FBtr0331176'] 2021-10-25 09:36:53.959 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28854661, 28854729), (28854883, 28854945), (28855406, 28855732), (28855941, 28857142), (28857339, 28859155), (28857339, 28859391)] 2021-10-25 09:36:53.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:53.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.081 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16405170, 16405325), (16405428, 16405501), (16405836, 16407020), (16405845, 16407020), (16407359, 16408106), (16407359, 16408327), (16407359, 16411001)] 2021-10-25 09:36:54.083 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:54.083 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.099 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265276: ['FBtr0082533', 'FBtr0110876', 'FBtr0110877', 'FBtr0305186', 'FBtr0307082', 'FBtr0307083', 'FBtr0307085', 'FBtr0307086', 'FBtr0307087', 'FBtr0330170'] 2021-10-25 09:36:54.381 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014179: ['FBtr0079855', 'FBtr0335492'] 2021-10-25 09:36:54.415 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11769000, 11769057), (11769154, 11769369), (11770103, 11771192), (11770103, 11771153), (11771300, 11771396), (11771300, 11778306), (11771300, 11778981), (11771300, 11777473), (11771300, 11773521), (11771300, 11778857), (11778621, 11778981), (11778621, 11778857)] 2021-10-25 09:36:54.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:54.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.442 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9581119, 9581194)] 2021-10-25 09:36:54.444 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:54.444 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.452 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0110877': ['FBtr0330170']} 2021-10-25 09:36:54.453 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330170']] 2021-10-25 09:36:54.530 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014184: ['FBtr0088013', 'FBtr0088014', 'FBtr0088015'] 2021-10-25 09:36:54.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12167927, 12167993), (12168203, 12174090), (12168203, 12168422), (12168203, 12170923)] 2021-10-25 09:36:54.607 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:54.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014189: ['FBtr0079123', 'FBtr0079124', 'FBtr0079125', 'FBtr0331676'] 2021-10-25 09:36:54.844 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5539644, 5539706), (5540109, 5540168), (5540300, 5540971), (5541090, 5541152), (5541336, 5541432), (5541656, 5541722), (5541969, 5542182), (5541976, 5542182)] 2021-10-25 09:36:54.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5540168, 5541090, 'FBtr0331676_exon_5') contains intron (5540300, 5540971) 2021-10-25 09:36:54.847 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331676_exon_5'] 2021-10-25 09:36:54.847 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:54.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265295: ['FBtr0304128'] 2021-10-25 09:36:54.854 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265295 has a single transcript. 2021-10-25 09:36:54.896 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265296: ['FBtr0299550', 'FBtr0299549', 'FBtr0299548', 'FBtr0299552', 'FBtr0299546', 'FBtr0302124', 'FBtr0299551', 'FBtr0299547', 'FBtr0302123', 'FBtr0330335', 'FBtr0330336', 'FBtr0330337', 'FBtr0339133', 'FBtr0339134', 'FBtr0346856'] 2021-10-25 09:36:55.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014269: ['FBtr0086601'] 2021-10-25 09:36:55.052 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014269 has a single transcript. 2021-10-25 09:36:55.060 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014340: ['FBtr0070829'] 2021-10-25 09:36:55.061 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014340 has a single transcript. 2021-10-25 09:36:55.070 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014342: ['FBtr0089313', 'FBtr0300009', 'FBtr0346136'] 2021-10-25 09:36:55.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5549188, 5549592), (5549762, 5549822)] 2021-10-25 09:36:55.152 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:55.152 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.271 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014343: ['FBtr0075911', 'FBtr0075912', 'FBtr0330077'] 2021-10-25 09:36:55.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7161798, 7163088), (7163179, 7163751), (7163506, 7163751), (7163878, 7164247), (7163878, 7164349), (7164513, 7164729), (7164849, 7164924), (7164876, 7164924), (7165215, 7165284), (7166601, 7166662), (7167148, 7167227), (7167163, 7167227), (7167508, 7167575), (7167726, 7167847), (7168021, 7168169), (7168289, 7172377), (7168289, 7171672), (7171957, 7173281), (7172665, 7173281), (7173554, 7175424), (7175576, 7179722), (7179867, 7180137), (7180586, 7182307), (7182425, 7182540), (7182687, 7183377), (7183539, 7183622), (7183955, 7189266)] 2021-10-25 09:36:55.343 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7160303, 7163179, 'FBtr0299549_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.345 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7159198, 7163179, 'FBtr0299551_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.347 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7160303, 7163179, 'FBtr0330335_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.348 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7160303, 7163179, 'FBtr0330336_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.349 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7160303, 7163179, 'FBtr0330337_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.352 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7160303, 7163179, 'FBtr0346856_exon_21') contains intron (7161798, 7163088) 2021-10-25 09:36:55.353 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0299549_exon_21', 'FBtr0299551_exon_21', 'FBtr0330335_exon_21', 'FBtr0330336_exon_21', 'FBtr0330337_exon_21', 'FBtr0346856_exon_21'] 2021-10-25 09:36:55.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.354 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12694353, 12696499), (12697003, 12705219), (12705326, 12707374), (12707673, 12707982)] 2021-10-25 09:36:55.356 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:55.356 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.372 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075911': ['FBtr0330077']} 2021-10-25 09:36:55.372 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330077']] 2021-10-25 09:36:55.404 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330335': ['FBtr0330337', 'FBtr0346856']} 2021-10-25 09:36:55.404 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330337', 'FBtr0346856']] 2021-10-25 09:36:55.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014366: ['FBtr0078751'] 2021-10-25 09:36:55.449 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014366 has a single transcript. 2021-10-25 09:36:55.459 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014368: ['FBtr0076214'] 2021-10-25 09:36:55.460 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014368 has a single transcript. 2021-10-25 09:36:55.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014380: ['FBtr0082124', 'FBtr0305340'] 2021-10-25 09:36:55.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9497572, 9497631), (9497802, 9497879), (9498164, 9498232), (9498164, 9502374)] 2021-10-25 09:36:55.532 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:55.532 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.624 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014388: ['FBtr0073145', 'FBtr0073146'] 2021-10-25 09:36:55.683 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3404921, 3424424), (3404921, 3416803)] 2021-10-25 09:36:55.684 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:55.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.774 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014391: ['FBtr0074176', 'FBtr0074177'] 2021-10-25 09:36:55.836 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15848004, 15848885), (15848004, 15848297), (15848347, 15848885), (15849016, 15849135)] 2021-10-25 09:36:55.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:55.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:55.909 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014395: ['FBtr0077345'] 2021-10-25 09:36:55.910 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014395 has a single transcript. 2021-10-25 09:36:55.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014396: ['FBtr0077567', 'FBtr0333252', 'FBtr0333253', 'FBtr0333254', 'FBtr0333255', 'FBtr0333256', 'FBtr0333258', 'FBtr0333259', 'FBtr0445397'] 2021-10-25 09:36:56.085 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265297: ['FBtr0086736', 'FBtr0086740', 'FBtr0086738'] 2021-10-25 09:36:56.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18140332, 18141487), (18140954, 18141487), (18141416, 18141487), (18141672, 18143412), (18144897, 18144966), (18145274, 18145341)] 2021-10-25 09:36:56.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:56.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.220 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3494621, 3495479), (3495878, 3499320), (3499422, 3499510), (3499763, 3500000), (3500361, 3500422), (3500575, 3500637), (3500791, 3501171), (3501299, 3501362), (3501561, 3501617), (3502123, 3502415), (3502126, 3502415), (3502557, 3502645), (3503193, 3503250), (3503592, 3503688), (3504299, 3504360), (3504578, 3506557), (3506756, 3508053), (3506756, 3507195), (3506756, 3507765), (3506756, 3507188)] 2021-10-25 09:36:56.222 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0077567_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.223 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0333252_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.223 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3499510, 3500361, 'FBtr0333253_exon_12') contains intron (3499763, 3500000) 2021-10-25 09:36:56.224 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0333253_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.224 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0333254_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.225 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0333255_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.226 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0333256_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.227 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3499510, 3500361, 'FBtr0333259_exon_13') contains intron (3499763, 3500000) 2021-10-25 09:36:56.228 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3503250, 3504299, 'FBtr0445397_exon_4') contains intron (3503592, 3503688) 2021-10-25 09:36:56.229 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077567_exon_4', 'FBtr0333252_exon_4', 'FBtr0333253_exon_12', 'FBtr0333253_exon_4', 'FBtr0333254_exon_4', 'FBtr0333255_exon_4', 'FBtr0333256_exon_4', 'FBtr0333259_exon_13', 'FBtr0445397_exon_4'] 2021-10-25 09:36:56.229 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.261 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0077567': ['FBtr0445397']} 2021-10-25 09:36:56.261 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0445397']] 2021-10-25 09:36:56.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265298: ['FBtr0089898', 'FBtr0089899', 'FBtr0302910', 'FBtr0306252'] 2021-10-25 09:36:56.431 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12431682, 12432121), (12432204, 12432308), (12432723, 12433578), (12433709, 12433834), (12433709, 12434558)] 2021-10-25 09:36:56.433 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12431074, 12432204, 'FBtr0306252_exon_4') contains intron (12431682, 12432121) 2021-10-25 09:36:56.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0306252_exon_4'] 2021-10-25 09:36:56.433 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.608 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265299: ['FBtr0339301'] 2021-10-25 09:36:56.608 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265299 has a single transcript. 2021-10-25 09:36:56.610 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014411: ['FBtr0070311'] 2021-10-25 09:36:56.610 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014411 has a single transcript. 2021-10-25 09:36:56.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014417: ['FBtr0079711', 'FBtr0331991'] 2021-10-25 09:36:56.619 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265300: ['FBtr0339304'] 2021-10-25 09:36:56.619 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265300 has a single transcript. 2021-10-25 09:36:56.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265301: ['FBtr0339305'] 2021-10-25 09:36:56.627 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265301 has a single transcript. 2021-10-25 09:36:56.635 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265302: ['FBtr0339311'] 2021-10-25 09:36:56.635 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265302 has a single transcript. 2021-10-25 09:36:56.644 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265303: ['FBtr0339314'] 2021-10-25 09:36:56.645 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265303 has a single transcript. 2021-10-25 09:36:56.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265304: ['FBtr0339340'] 2021-10-25 09:36:56.653 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265304 has a single transcript. 2021-10-25 09:36:56.660 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265305: ['FBtr0339339'] 2021-10-25 09:36:56.660 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265305 has a single transcript. 2021-10-25 09:36:56.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265306: ['FBtr0339347'] 2021-10-25 09:36:56.667 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265306 has a single transcript. 2021-10-25 09:36:56.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265307: ['FBtr0339348'] 2021-10-25 09:36:56.674 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265307 has a single transcript. 2021-10-25 09:36:56.678 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8411207, 8411286)] 2021-10-25 09:36:56.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:56.680 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.682 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265308: ['FBtr0339355'] 2021-10-25 09:36:56.682 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265308 has a single transcript. 2021-10-25 09:36:56.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265309: ['FBtr0339358'] 2021-10-25 09:36:56.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265309 has a single transcript. 2021-10-25 09:36:56.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265310: ['FBtr0339365'] 2021-10-25 09:36:56.696 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265310 has a single transcript. 2021-10-25 09:36:56.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265311: ['FBtr0339366'] 2021-10-25 09:36:56.703 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265311 has a single transcript. 2021-10-25 09:36:56.710 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265312: ['FBtr0339353'] 2021-10-25 09:36:56.711 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265312 has a single transcript. 2021-10-25 09:36:56.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265313: ['FBtr0344468', 'FBtr0344469', 'FBtr0339363', 'FBtr0339364'] 2021-10-25 09:36:56.760 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014427: ['FBtr0085390'] 2021-10-25 09:36:56.761 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014427 has a single transcript. 2021-10-25 09:36:56.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014454: ['FBtr0079500'] 2021-10-25 09:36:56.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014454 has a single transcript. 2021-10-25 09:36:56.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014455: ['FBtr0074030', 'FBtr0332590', 'FBtr0346181'] 2021-10-25 09:36:56.832 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9138570, 9138937), (9139268, 9139353), (9139268, 9139979), (9140298, 9141437), (9141121, 9141437), (9141361, 9141437)] 2021-10-25 09:36:56.834 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:56.835 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.859 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15450415, 15450666), (15450415, 15451394), (15450857, 15451394)] 2021-10-25 09:36:56.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:56.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:56.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014464: ['FBtr0100003'] 2021-10-25 09:36:56.994 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014464 has a single transcript. 2021-10-25 09:36:57.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014465: ['FBtr0071201', 'FBtr0302936'] 2021-10-25 09:36:57.017 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265314: ['FBtr0339323'] 2021-10-25 09:36:57.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265314 has a single transcript. 2021-10-25 09:36:57.028 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265315: ['FBtr0339324'] 2021-10-25 09:36:57.028 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265315 has a single transcript. 2021-10-25 09:36:57.036 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265316: ['FBtr0339325'] 2021-10-25 09:36:57.036 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265316 has a single transcript. 2021-10-25 09:36:57.044 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265317: ['FBtr0339326'] 2021-10-25 09:36:57.044 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265317 has a single transcript. 2021-10-25 09:36:57.051 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265318: ['FBtr0339329'] 2021-10-25 09:36:57.051 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265318 has a single transcript. 2021-10-25 09:36:57.058 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265338: ['FBtr0339404'] 2021-10-25 09:36:57.058 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265338 has a single transcript. 2021-10-25 09:36:57.063 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8474201, 8474343), (8474404, 8475722)] 2021-10-25 09:36:57.064 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8474343, 8476071, 'FBtr0071201_exon_2') contains intron (8474404, 8475722) 2021-10-25 09:36:57.065 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071201_exon_2'] 2021-10-25 09:36:57.065 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265339: ['FBtr0339405'] 2021-10-25 09:36:57.065 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265339 has a single transcript. 2021-10-25 09:36:57.073 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265340: ['FBtr0339421'] 2021-10-25 09:36:57.073 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265340 has a single transcript. 2021-10-25 09:36:57.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265341: ['FBtr0344611'] 2021-10-25 09:36:57.080 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265341 has a single transcript. 2021-10-25 09:36:57.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265342: ['FBtr0339413'] 2021-10-25 09:36:57.088 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265342 has a single transcript. 2021-10-25 09:36:57.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265343: ['FBtr0339415'] 2021-10-25 09:36:57.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265343 has a single transcript. 2021-10-25 09:36:57.102 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265344: ['FBtr0339414'] 2021-10-25 09:36:57.102 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265344 has a single transcript. 2021-10-25 09:36:57.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265345: ['FBtr0344612'] 2021-10-25 09:36:57.109 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265345 has a single transcript. 2021-10-25 09:36:57.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265346: ['FBtr0339469'] 2021-10-25 09:36:57.116 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265346 has a single transcript. 2021-10-25 09:36:57.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265347: ['FBtr0339468'] 2021-10-25 09:36:57.126 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265347 has a single transcript. 2021-10-25 09:36:57.134 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265348: ['FBtr0339470'] 2021-10-25 09:36:57.134 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265348 has a single transcript. 2021-10-25 09:36:57.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265349: ['FBtr0301936'] 2021-10-25 09:36:57.142 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265349 has a single transcript. 2021-10-25 09:36:57.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014466: ['FBtr0071202'] 2021-10-25 09:36:57.146 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014466 has a single transcript. 2021-10-25 09:36:57.149 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265351: ['FBtr0081863'] 2021-10-25 09:36:57.149 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265351 has a single transcript. 2021-10-25 09:36:57.157 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014469: ['FBtr0088745', 'FBtr0339278'] 2021-10-25 09:36:57.163 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265356: ['FBtr0340447', 'FBtr0340448', 'FBtr0340449', 'FBtr0086572', 'FBtr0086573', 'FBtr0114622'] 2021-10-25 09:36:57.210 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8444673, 8444727), (8444930, 8445357), (8445467, 8445533), (8445883, 8445941), (8446311, 8446371), (8446546, 8446606)] 2021-10-25 09:36:57.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.212 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.289 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014848: ['FBtr0305334'] 2021-10-25 09:36:57.290 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014848 has a single transcript. 2021-10-25 09:36:57.300 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014849: ['FBtr0075574', 'FBtr0332123'] 2021-10-25 09:36:57.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18987691, 18989775), (18987691, 18989383), (18989688, 18989775), (18989866, 18993918), (18991333, 18993918), (18994059, 18995010), (18995146, 18996891), (18997034, 18997127), (18998387, 19001091), (18998423, 19001040), (18998423, 19001091), (18998909, 19001091), (19001789, 19004604), (19001789, 19002696), (19001789, 19005788), (19004883, 19005788), (19004889, 19005788), (19006571, 19007586), (19007746, 19008098), (19008239, 19008408), (19008485, 19008559)] 2021-10-25 09:36:57.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.356 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15659766, 15659820), (15660039, 15660100)] 2021-10-25 09:36:57.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014850: ['FBtr0075582'] 2021-10-25 09:36:57.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014850 has a single transcript. 2021-10-25 09:36:57.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014851: ['FBtr0075575'] 2021-10-25 09:36:57.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014851 has a single transcript. 2021-10-25 09:36:57.456 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014857: ['FBtr0079010', 'FBtr0333536', 'FBtr0333537'] 2021-10-25 09:36:57.535 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5055540, 5055630)] 2021-10-25 09:36:57.536 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.537 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265362: ['FBtr0339490'] 2021-10-25 09:36:57.643 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265362 has a single transcript. 2021-10-25 09:36:57.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265363: ['FBtr0339553'] 2021-10-25 09:36:57.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265363 has a single transcript. 2021-10-25 09:36:57.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014859: ['FBtr0081397', 'FBtr0301347'] 2021-10-25 09:36:57.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265364: ['FBtr0339554'] 2021-10-25 09:36:57.658 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265364 has a single transcript. 2021-10-25 09:36:57.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265365: ['FBtr0339556'] 2021-10-25 09:36:57.665 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265365 has a single transcript. 2021-10-25 09:36:57.672 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265366: ['FBtr0339566'] 2021-10-25 09:36:57.672 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265366 has a single transcript. 2021-10-25 09:36:57.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265367: ['FBtr0339568'] 2021-10-25 09:36:57.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265367 has a single transcript. 2021-10-25 09:36:57.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265368: ['FBtr0339569'] 2021-10-25 09:36:57.686 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265368 has a single transcript. 2021-10-25 09:36:57.692 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265369: ['FBtr0339570'] 2021-10-25 09:36:57.692 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265369 has a single transcript. 2021-10-25 09:36:57.699 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265370: ['FBtr0339573'] 2021-10-25 09:36:57.699 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265370 has a single transcript. 2021-10-25 09:36:57.706 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265371: ['FBtr0339584'] 2021-10-25 09:36:57.706 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265371 has a single transcript. 2021-10-25 09:36:57.709 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20687066, 20687249), (20688336, 20688455), (20689601, 20690142), (20690456, 20713036), (20690456, 20713598), (20714119, 20714217)] 2021-10-25 09:36:57.710 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20713036, 20714588, 'FBtr0081397_exon_1') contains intron (20714119, 20714217) 2021-10-25 09:36:57.710 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081397_exon_1'] 2021-10-25 09:36:57.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.713 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265372: ['FBtr0339587'] 2021-10-25 09:36:57.713 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265372 has a single transcript. 2021-10-25 09:36:57.720 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265373: ['FBtr0339580', 'FBtr0339579', 'FBtr0339581'] 2021-10-25 09:36:57.786 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014861: ['FBtr0081827'] 2021-10-25 09:36:57.786 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014861 has a single transcript. 2021-10-25 09:36:57.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014863: ['FBtr0081616', 'FBtr0081617', 'FBtr0346967'] 2021-10-25 09:36:57.802 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12053343, 12053572), (12053343, 12055973), (12053343, 12055968)] 2021-10-25 09:36:57.803 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.804 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.877 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7115838, 7116651), (7115838, 7117650)] 2021-10-25 09:36:57.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:57.878 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:57.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265374: ['FBtr0339586'] 2021-10-25 09:36:57.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265374 has a single transcript. 2021-10-25 09:36:57.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265375: ['FBtr0339632'] 2021-10-25 09:36:57.935 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265375 has a single transcript. 2021-10-25 09:36:57.942 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265376: ['FBtr0339604', 'FBtr0339605'] 2021-10-25 09:36:57.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014865: ['FBtr0087386'] 2021-10-25 09:36:57.991 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014865 has a single transcript. 2021-10-25 09:36:57.999 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4597174, 4598468), (4597174, 4599684), (4598871, 4599684)] 2021-10-25 09:36:58.000 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.001 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014868: ['FBtr0071344'] 2021-10-25 09:36:58.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014868 has a single transcript. 2021-10-25 09:36:58.011 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014869: ['FBtr0085384', 'FBtr0100482', 'FBtr0100483'] 2021-10-25 09:36:58.074 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265377: ['FBtr0339608', 'FBtr0339609'] 2021-10-25 09:36:58.103 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29148552, 29149008), (29149506, 29149568)] 2021-10-25 09:36:58.105 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.105 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.130 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8287364, 8287483), (8287364, 8287429)] 2021-10-25 09:36:58.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265378: ['FBtr0344484'] 2021-10-25 09:36:58.204 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265378 has a single transcript. 2021-10-25 09:36:58.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265379: ['FBtr0339611'] 2021-10-25 09:36:58.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265379 has a single transcript. 2021-10-25 09:36:58.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265380: ['FBtr0339613'] 2021-10-25 09:36:58.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265380 has a single transcript. 2021-10-25 09:36:58.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265381: ['FBtr0339618'] 2021-10-25 09:36:58.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265381 has a single transcript. 2021-10-25 09:36:58.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265382: ['FBtr0339615'] 2021-10-25 09:36:58.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265382 has a single transcript. 2021-10-25 09:36:58.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014870: ['FBtr0087072', 'FBtr0087073', 'FBtr0087074'] 2021-10-25 09:36:58.246 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265383: ['FBtr0339620'] 2021-10-25 09:36:58.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265383 has a single transcript. 2021-10-25 09:36:58.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265413: ['FBtr0339659', 'FBtr0339660', 'FBtr0339661', 'FBtr0340356', 'FBtr0340357'] 2021-10-25 09:36:58.333 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16864103, 16864568), (16865033, 16865091), (16865036, 16865091), (16865329, 16865393), (16865881, 16865943), (16866096, 16866154), (16867246, 16867325)] 2021-10-25 09:36:58.335 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16866154, 16867714, 'FBtr0087073_exon_1') contains intron (16867246, 16867325) 2021-10-25 09:36:58.335 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087073_exon_1'] 2021-10-25 09:36:58.336 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9070658, 9071587), (9071801, 9071871), (9071989, 9078336), (9073124, 9073181), (9073305, 9078336)] 2021-10-25 09:36:58.405 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9072819, 9073305, 'FBtr0339659_exon_2') contains intron (9073124, 9073181) 2021-10-25 09:36:58.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339659_exon_2'] 2021-10-25 09:36:58.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014877: ['FBtr0087675'] 2021-10-25 09:36:58.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014877 has a single transcript. 2021-10-25 09:36:58.479 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014879: ['FBtr0083062'] 2021-10-25 09:36:58.479 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014879 has a single transcript. 2021-10-25 09:36:58.486 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014903: ['FBtr0070175'] 2021-10-25 09:36:58.486 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014903 has a single transcript. 2021-10-25 09:36:58.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014906: ['FBtr0077576', 'FBtr0308315', 'FBtr0332371'] 2021-10-25 09:36:58.583 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3164074, 3166527), (3164074, 3166969), (3166651, 3166969), (3167139, 3167203), (3167558, 3167623), (3167973, 3168034)] 2021-10-25 09:36:58.585 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.585 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265414: ['FBtr0339662'] 2021-10-25 09:36:58.638 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265414 has a single transcript. 2021-10-25 09:36:58.648 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265416: ['FBtr0339702', 'FBtr0339703'] 2021-10-25 09:36:58.697 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13446277, 13453281), (13453394, 13483027), (13483286, 13495840), (13496206, 13499797), (13499883, 13500493), (13500823, 13500950), (13501048, 13502458), (13502598, 13504034), (13504144, 13506098), (13506230, 13520517), (13506230, 13518273), (13520600, 13520901), (13521183, 13522753)] 2021-10-25 09:36:58.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.700 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014930: ['FBtr0081763', 'FBtr0339712'] 2021-10-25 09:36:58.765 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7912864, 7912928)] 2021-10-25 09:36:58.766 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.767 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.781 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265417: ['FBtr0339704'] 2021-10-25 09:36:58.782 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265417 has a single transcript. 2021-10-25 09:36:58.790 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265418: ['FBtr0339721'] 2021-10-25 09:36:58.790 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265418 has a single transcript. 2021-10-25 09:36:58.798 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265419: ['FBtr0339726', 'FBtr0345278'] 2021-10-25 09:36:58.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014931: ['FBtr0081757', 'FBtr0304703'] 2021-10-25 09:36:58.860 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8113048, 8113112), (8113048, 8113108)] 2021-10-25 09:36:58.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.861 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7914637, 7914791), (7915274, 7915912), (7915369, 7915912)] 2021-10-25 09:36:58.899 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:58.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:58.937 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265420: ['FBtr0339727'] 2021-10-25 09:36:58.938 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265420 has a single transcript. 2021-10-25 09:36:58.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265421: ['FBtr0339733'] 2021-10-25 09:36:58.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265421 has a single transcript. 2021-10-25 09:36:58.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265422: ['FBtr0339732'] 2021-10-25 09:36:58.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265422 has a single transcript. 2021-10-25 09:36:58.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265423: ['FBtr0339728'] 2021-10-25 09:36:58.965 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265423 has a single transcript. 2021-10-25 09:36:58.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265424: ['FBtr0339730'] 2021-10-25 09:36:58.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265424 has a single transcript. 2021-10-25 09:36:58.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265425: ['FBtr0339729'] 2021-10-25 09:36:58.979 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265425 has a single transcript. 2021-10-25 09:36:58.981 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0014949: ['FBtr0084278'] 2021-10-25 09:36:58.982 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0014949 has a single transcript. 2021-10-25 09:36:58.985 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265426: ['FBtr0344485'] 2021-10-25 09:36:58.985 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265426 has a single transcript. 2021-10-25 09:36:58.992 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265427: ['FBtr0339737'] 2021-10-25 09:36:58.992 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265427 has a single transcript. 2021-10-25 09:36:58.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015000: ['FBtr0078991', 'FBtr0330714'] 2021-10-25 09:36:58.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265428: ['FBtr0339739'] 2021-10-25 09:36:58.999 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265428 has a single transcript. 2021-10-25 09:36:59.007 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265429: ['FBtr0339745'] 2021-10-25 09:36:59.007 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265429 has a single transcript. 2021-10-25 09:36:59.025 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265434: ['FBtr0072398', 'FBtr0072399', 'FBtr0100466', 'FBtr0100467', 'FBtr0302572', 'FBtr0302573', 'FBtr0302574', 'FBtr0302575', 'FBtr0306576'] 2021-10-25 09:36:59.048 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4945681, 4945901), (4946013, 4946070), (4946221, 4946906), (4947734, 4947825)] 2021-10-25 09:36:59.050 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4946906, 4948324, 'FBtr0078991_exon_4') contains intron (4947734, 4947825) 2021-10-25 09:36:59.050 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078991_exon_4'] 2021-10-25 09:36:59.050 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.123 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015001: ['FBtr0088125'] 2021-10-25 09:36:59.123 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015001 has a single transcript. 2021-10-25 09:36:59.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015008: ['FBtr0083380'] 2021-10-25 09:36:59.133 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015008 has a single transcript. 2021-10-25 09:36:59.142 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015010: ['FBtr0073937', 'FBtr0305582', 'FBtr0333658'] 2021-10-25 09:36:59.225 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14785965, 14786093)] 2021-10-25 09:36:59.225 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:59.225 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.293 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24991272, 24991564), (24991272, 24991809), (24991698, 24991809), (24991973, 24992032), (24993328, 24993390), (24993921, 24994011), (24994316, 24994406), (24997146, 24997208), (24997301, 24997577), (24997301, 24997912), (24997301, 24998277), (24997697, 24998277), (24997936, 24998277), (24998301, 25000038), (25000160, 25002287), (25002444, 25005867), (25006083, 25010379), (25010616, 25011099), (25010616, 25011375), (25010616, 25011311), (25010616, 25011850)] 2021-10-25 09:36:59.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:59.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.337 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015011: ['FBtr0083378', 'FBtr0083379'] 2021-10-25 09:36:59.388 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16978523, 16978589), (16978710, 16978779), (16979023, 16979086), (16979405, 16979476), (16980143, 16980293), (16980363, 16981638), (16981699, 16981822)] 2021-10-25 09:36:59.389 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16978438, 16978710, 'FBtr0083379_exon_7') contains intron (16978523, 16978589) 2021-10-25 09:36:59.390 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083379_exon_7'] 2021-10-25 09:36:59.390 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.467 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015019: ['FBtr0083337', 'FBtr0083338', 'FBtr0302370', 'FBtr0302371'] 2021-10-25 09:36:59.575 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16647697, 16647835), (16647741, 16647835), (16647756, 16647835), (16647929, 16647987), (16648049, 16648134), (16648634, 16648700)] 2021-10-25 09:36:59.576 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16647604, 16647929, 'FBtr0083338_exon_1') contains intron (16647697, 16647835) 2021-10-25 09:36:59.577 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083338_exon_1'] 2021-10-25 09:36:59.577 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015024: ['FBtr0073680', 'FBtr0073682', 'FBtr0340408', 'FBtr0300380', 'FBtr0345162', 'FBtr0345163'] 2021-10-25 09:36:59.755 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265443: ['FBtr0339753'] 2021-10-25 09:36:59.756 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265443 has a single transcript. 2021-10-25 09:36:59.764 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265444: ['FBtr0339754'] 2021-10-25 09:36:59.764 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265444 has a single transcript. 2021-10-25 09:36:59.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265445: ['FBtr0339794'] 2021-10-25 09:36:59.771 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265445 has a single transcript. 2021-10-25 09:36:59.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265446: ['FBtr0339795'] 2021-10-25 09:36:59.778 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265446 has a single transcript. 2021-10-25 09:36:59.785 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265447: ['FBtr0344757', 'FBtr0339803'] 2021-10-25 09:36:59.840 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:36:59.841 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:59.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265448: ['FBtr0339804'] 2021-10-25 09:36:59.917 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265448 has a single transcript. 2021-10-25 09:36:59.928 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265449: ['FBtr0339805'] 2021-10-25 09:36:59.928 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265449 has a single transcript. 2021-10-25 09:36:59.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265450: ['FBtr0339806'] 2021-10-25 09:36:59.936 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265450 has a single transcript. 2021-10-25 09:36:59.942 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12654168, 12655170), (12654532, 12655170), (12654969, 12655170), (12655316, 12655377), (12656152, 12656333)] 2021-10-25 09:36:59.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265451: ['FBtr0339807'] 2021-10-25 09:36:59.943 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265451 has a single transcript. 2021-10-25 09:36:59.944 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:36:59.945 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:36:59.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265452: ['FBtr0339809'] 2021-10-25 09:36:59.951 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265452 has a single transcript. 2021-10-25 09:36:59.957 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265453: ['FBtr0339811'] 2021-10-25 09:36:59.957 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265453 has a single transcript. 2021-10-25 09:36:59.964 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265454: ['FBtr0339810'] 2021-10-25 09:36:59.964 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265454 has a single transcript. 2021-10-25 09:36:59.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265455: ['FBtr0339812'] 2021-10-25 09:36:59.971 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265455 has a single transcript. 2021-10-25 09:36:59.979 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265457: ['FBtr0339821', 'FBtr0339822', 'FBtr0339823'] 2021-10-25 09:37:00.069 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7167290, 7277914), (7167290, 7173647), (7168092, 7173647), (7173942, 7277914), (7278527, 7358660), (7358687, 7405144)] 2021-10-25 09:37:00.071 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:00.071 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:00.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265458: ['FBtr0339831'] 2021-10-25 09:37:00.200 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265458 has a single transcript. 2021-10-25 09:37:00.210 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265464: ['FBtr0071188'] 2021-10-25 09:37:00.210 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265464 has a single transcript. 2021-10-25 09:37:00.218 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265467: ['FBtr0339926'] 2021-10-25 09:37:00.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265467 has a single transcript. 2021-10-25 09:37:00.225 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265468: ['FBtr0339927'] 2021-10-25 09:37:00.225 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265468 has a single transcript. 2021-10-25 09:37:00.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015025: ['FBtr0075504'] 2021-10-25 09:37:00.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265469: ['FBtr0339928'] 2021-10-25 09:37:00.233 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265469 has a single transcript. 2021-10-25 09:37:00.232 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015025 has a single transcript. 2021-10-25 09:37:00.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265470: ['FBtr0339929'] 2021-10-25 09:37:00.239 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0265470 has a single transcript. 2021-10-25 09:37:00.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015031: ['FBtr0079072', 'FBtr0307034', 'FBtr0307035'] 2021-10-25 09:37:00.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0265487: ['FBtr0086992', 'FBtr0086991', 'FBtr0086994', 'FBtr0306601', 'FBtr0306603', 'FBtr0306604', 'FBtr0306606', 'FBtr0310058', 'FBtr0310059', 'FBtr0310346', 'FBtr0336940', 'FBtr0336941', 'FBtr0336942'] 2021-10-25 09:37:00.326 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5327286, 5327502), (5327350, 5327502), (5327676, 5327743)] 2021-10-25 09:37:00.328 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:00.328 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:00.441 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015032: ['FBtr0085712'] 2021-10-25 09:37:00.441 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015032 has a single transcript. 2021-10-25 09:37:00.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015033: ['FBtr0076832'] 2021-10-25 09:37:00.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015033 has a single transcript. 2021-10-25 09:37:00.458 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015034: ['FBtr0088746'] 2021-10-25 09:37:00.458 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015034 has a single transcript. 2021-10-25 09:37:00.466 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015035: ['FBtr0079925'] 2021-10-25 09:37:00.466 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015035 has a single transcript. 2021-10-25 09:37:00.473 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015036: ['FBtr0070388'] 2021-10-25 09:37:00.474 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015036 has a single transcript. 2021-10-25 09:37:00.481 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015037: ['FBtr0088592'] 2021-10-25 09:37:00.481 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015037 has a single transcript. 2021-10-25 09:37:00.489 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015038: ['FBtr0089056'] 2021-10-25 09:37:00.489 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015038 has a single transcript. 2021-10-25 09:37:00.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015039: ['FBtr0089055'] 2021-10-25 09:37:00.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015039 has a single transcript. 2021-10-25 09:37:00.503 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015040: ['FBtr0072321'] 2021-10-25 09:37:00.503 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015040 has a single transcript. 2021-10-25 09:37:00.510 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015075: ['FBtr0078492'] 2021-10-25 09:37:00.510 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015075 has a single transcript. 2021-10-25 09:37:00.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015218: ['FBtr0076490', 'FBtr0076491', 'FBtr0076492', 'FBtr0076493', 'FBtr0076487', 'FBtr0076488', 'FBtr0076489', 'FBtr0333884', 'FBtr0333885'] 2021-10-25 09:37:00.646 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17217075, 17220054), (17220103, 17275409), (17266053, 17275409), (17266211, 17275409), (17276063, 17351093), (17351264, 17352128), (17352305, 17359305), (17352305, 17361979), (17352305, 17354178), (17352305, 17361112), (17354412, 17359305), (17354412, 17361979), (17354412, 17361112), (17354463, 17361112), (17359557, 17361979), (17361154, 17361979), (17362097, 17371094), (17362097, 17362271), (17362097, 17373076), (17362097, 17373817), (17371153, 17373076), (17373161, 17373817)] 2021-10-25 09:37:00.650 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17361979, 17365386, 'FBtr0336940_exon_7') contains intron (17362097, 17362271) 2021-10-25 09:37:00.651 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17361979, 17365386, 'FBtr0336941_exon_6') contains intron (17362097, 17362271) 2021-10-25 09:37:00.652 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17361979, 17365386, 'FBtr0336942_exon_7') contains intron (17362097, 17362271) 2021-10-25 09:37:00.652 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0336940_exon_7', 'FBtr0336941_exon_6', 'FBtr0336942_exon_7'] 2021-10-25 09:37:00.652 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:00.799 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9400033, 9400096), (9400184, 9400418), (9400518, 9400582), (9400953, 9401039), (9400953, 9402279), (9401367, 9401656), (9401367, 9401916), (9401367, 9402170), (9401367, 9402279), (9401367, 9402098), (9401606, 9402209), (9401606, 9402279), (9401718, 9402098)] 2021-10-25 09:37:00.802 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:00.803 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:01.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015221: ['FBtr0085622', 'FBtr0085623', 'FBtr0085624', 'FBtr0332168', 'FBtr0332169'] 2021-10-25 09:37:01.430 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30387921, 30388579), (30388377, 30388579), (30388902, 30389198), (30389328, 30389696), (30389328, 30389415), (30389442, 30389696)] 2021-10-25 09:37:01.433 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:01.434 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:01.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015222: ['FBtr0085631', 'FBtr0085632', 'FBtr0085633', 'FBtr0085634', 'FBtr0085635', 'FBtr0332170', 'FBtr0344763', 'FBtr0306587', 'FBtr0306588'] 2021-10-25 09:37:01.938 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30386256, 30386318), (30386596, 30386717), (30386596, 30387463), (30386828, 30387102), (30386828, 30386883), (30386828, 30387463), (30387111, 30387463), (30387409, 30387463), (30387550, 30387774), (30387602, 30387774), (30387642, 30387774)] 2021-10-25 09:37:01.939 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30387463, 30388178, 'FBtr0085631_exon_1') contains intron (30387550, 30387774) 2021-10-25 09:37:01.940 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (30385572, 30386596, 'FBtr0085635_exon_3') contains intron (30386256, 30386318) 2021-10-25 09:37:01.942 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085631_exon_1', 'FBtr0085635_exon_3'] 2021-10-25 09:37:01.942 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:02.392 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015229: ['FBtr0084157'] 2021-10-25 09:37:02.392 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015229 has a single transcript. 2021-10-25 09:37:02.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015230: ['FBtr0083340'] 2021-10-25 09:37:02.401 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015230 has a single transcript. 2021-10-25 09:37:02.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015239: ['FBtr0078390', 'FBtr0078391', 'FBtr0078392', 'FBtr0078389', 'FBtr0303653', 'FBtr0303654'] 2021-10-25 09:37:02.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21495480, 21495598), (21495868, 21496420), (21495868, 21496426), (21496741, 21496819), (21496877, 21497290), (21496907, 21497290), (21496907, 21497142), (21496922, 21497290)] 2021-10-25 09:37:02.581 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:02.581 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:02.845 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015240: ['FBtr0084756'] 2021-10-25 09:37:02.845 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015240 has a single transcript. 2021-10-25 09:37:02.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015245: ['FBtr0073434', 'FBtr0073435'] 2021-10-25 09:37:02.906 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11108633, 11110040), (11109925, 11110040), (11111411, 11111474)] 2021-10-25 09:37:02.908 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:02.908 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:02.991 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015247: ['FBtr0087296', 'FBtr0087297'] 2021-10-25 09:37:03.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15932720, 15932783), (15933819, 15934198), (15934580, 15934797)] 2021-10-25 09:37:03.047 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:03.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:03.127 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015268: ['FBtr0072219', 'FBtr0305989', 'FBtr0305990'] 2021-10-25 09:37:03.216 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23905541, 23905604), (23905793, 23905855), (23905996, 23906059), (23906528, 23906614), (23906722, 23906909), (23906722, 23907043), (23906722, 23907207)] 2021-10-25 09:37:03.218 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:03.218 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:03.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015269: ['FBtr0084952', 'FBtr0084953', 'FBtr0330182', 'FBtr0330183', 'FBtr0100113'] 2021-10-25 09:37:03.491 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(25983348, 25983591), (25983735, 25983834), (25984219, 25984274), (25984416, 25984472), (25985066, 25985127), (25985449, 25985511), (25986064, 25986118), (25986656, 25986711), (25988303, 25988359), (25988966, 25989019), (25991375, 25991430), (25991685, 25991749), (25991845, 25992399), (25991845, 25992807), (25992489, 25992807), (25993010, 25993072), (25993259, 25993318), (25993484, 25994737), (25993484, 25994566), (25993484, 25993664)] 2021-10-25 09:37:03.494 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:03.494 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:03.520 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330182': ['FBtr0100113']} 2021-10-25 09:37:03.520 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0100113']] 2021-10-25 09:37:03.659 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015270: ['FBtr0082866'] 2021-10-25 09:37:03.659 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015270 has a single transcript. 2021-10-25 09:37:03.668 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015271: ['FBtr0080543'] 2021-10-25 09:37:03.668 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015271 has a single transcript. 2021-10-25 09:37:03.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015277: ['FBtr0072064'] 2021-10-25 09:37:03.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015277 has a single transcript. 2021-10-25 09:37:03.688 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015278: ['FBtr0076087', 'FBtr0076088', 'FBtr0076086', 'FBtr0301816', 'FBtr0332055'] 2021-10-25 09:37:03.845 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11775903, 11775963), (11776113, 11776175), (11776267, 11776329), (11776526, 11780677), (11780878, 11780935), (11781328, 11781390), (11781827, 11781883), (11782129, 11782223), (11782863, 11782927), (11783498, 11783559), (11784193, 11784254), (11784343, 11784401), (11785115, 11787057), (11786639, 11787057), (11787110, 11787178), (11788245, 11789540), (11789620, 11789969), (11789620, 11789921)] 2021-10-25 09:37:03.847 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11789540, 11790013, 'FBtr0076088_exon_1') contains intron (11789620, 11789969) 2021-10-25 09:37:03.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11789540, 11790013, 'FBtr0332055_exon_1') contains intron (11789620, 11789969) 2021-10-25 09:37:03.849 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076088_exon_1', 'FBtr0332055_exon_1'] 2021-10-25 09:37:03.849 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.081 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015279: ['FBtr0083940', 'FBtr0083941', 'FBtr0334643'] 2021-10-25 09:37:04.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20629875, 20629938), (20630058, 20630126), (20630297, 20630356), (20630663, 20630719), (20631307, 20631508), (20631715, 20631777), (20633713, 20634545), (20633713, 20634618), (20633713, 20634126)] 2021-10-25 09:37:04.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:04.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015282: ['FBtr0084520', 'FBtr0346154'] 2021-10-25 09:37:04.351 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23931262, 23931323)] 2021-10-25 09:37:04.352 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:04.353 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015283: ['FBtr0078368', 'FBtr0333453'] 2021-10-25 09:37:04.482 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21537138, 21537239), (21537380, 21537440)] 2021-10-25 09:37:04.484 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:04.484 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015286: ['FBtr0070582', 'FBtr0070583', 'FBtr0070584'] 2021-10-25 09:37:04.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3706251, 3707367), (3706251, 3708743), (3707491, 3708743), (3708918, 3709835), (3709996, 3710068), (3710248, 3716471), (3710248, 3719362), (3716667, 3719362)] 2021-10-25 09:37:04.669 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:04.669 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.792 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015288: ['FBtr0070148'] 2021-10-25 09:37:04.792 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015288 has a single transcript. 2021-10-25 09:37:04.802 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015295: ['FBtr0087244'] 2021-10-25 09:37:04.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015295 has a single transcript. 2021-10-25 09:37:04.809 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015296: ['FBtr0076458'] 2021-10-25 09:37:04.809 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015296 has a single transcript. 2021-10-25 09:37:04.818 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015298: ['FBtr0076879'] 2021-10-25 09:37:04.818 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015298 has a single transcript. 2021-10-25 09:37:04.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015299: ['FBtr0079590'] 2021-10-25 09:37:04.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015299 has a single transcript. 2021-10-25 09:37:04.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015300: ['FBtr0072351'] 2021-10-25 09:37:04.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015300 has a single transcript. 2021-10-25 09:37:04.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015316: ['FBtr0301665', 'FBtr0345312'] 2021-10-25 09:37:04.891 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:04.892 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:04.892 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:04.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015320: ['FBtr0080115', 'FBtr0080116', 'FBtr0333492', 'FBtr0345437'] 2021-10-25 09:37:05.093 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10766130, 10766190), (10766275, 10766390), (10767012, 10767656)] 2021-10-25 09:37:05.094 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:05.095 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:05.317 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015321: ['FBtr0076395', 'FBtr0345603', 'FBtr0345604'] 2021-10-25 09:37:05.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9698755, 9698965), (9699118, 9699345)] 2021-10-25 09:37:05.495 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:05.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:05.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015331: ['FBtr0078967'] 2021-10-25 09:37:05.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015331 has a single transcript. 2021-10-25 09:37:05.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015336: ['FBtr0074375'] 2021-10-25 09:37:05.648 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015336 has a single transcript. 2021-10-25 09:37:05.655 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015338: ['FBtr0080850'] 2021-10-25 09:37:05.655 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015338 has a single transcript. 2021-10-25 09:37:05.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015351: ['FBtr0336486'] 2021-10-25 09:37:05.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015351 has a single transcript. 2021-10-25 09:37:05.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015359: ['FBtr0072877', 'FBtr0332664'] 2021-10-25 09:37:05.724 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2257531, 2257583), (2257802, 2257871), (2258517, 2258579)] 2021-10-25 09:37:05.725 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:05.725 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:05.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015360: ['FBtr0072904'] 2021-10-25 09:37:05.797 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015360 has a single transcript. 2021-10-25 09:37:05.814 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015371: ['FBtr0111006', 'FBtr0111007', 'FBtr0087415', 'FBtr0087416', 'FBtr0305213', 'FBtr0305214', 'FBtr0305215', 'FBtr0305216', 'FBtr0305217'] 2021-10-25 09:37:06.089 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15115688, 15138101), (15129185, 15138101), (15138436, 15138508), (15138981, 15139078), (15140095, 15141836), (15140095, 15140470), (15140095, 15140973), (15140095, 15140982), (15140095, 15140377), (15140677, 15140973), (15140677, 15140982), (15141300, 15141836)] 2021-10-25 09:37:06.092 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:06.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:06.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015372: ['FBtr0072120'] 2021-10-25 09:37:06.531 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015372 has a single transcript. 2021-10-25 09:37:06.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015376: ['FBtr0077541'] 2021-10-25 09:37:06.540 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015376 has a single transcript. 2021-10-25 09:37:06.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015379: ['FBtr0077193'] 2021-10-25 09:37:06.548 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015379 has a single transcript. 2021-10-25 09:37:06.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015380: ['FBtr0081195', 'FBtr0330209'] 2021-10-25 09:37:06.610 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19190834, 19205720), (19207038, 19207204), (19207501, 19207625)] 2021-10-25 09:37:06.611 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:06.611 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:06.624 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0081195': ['FBtr0330209']} 2021-10-25 09:37:06.624 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330209']] 2021-10-25 09:37:06.636 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015381: ['FBtr0079145', 'FBtr0333245'] 2021-10-25 09:37:06.691 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5926201, 5928068), (5928152, 5928209), (5928371, 5936139), (5937476, 5937572)] 2021-10-25 09:37:06.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:06.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:06.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015391: ['FBtr0080935'] 2021-10-25 09:37:06.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015391 has a single transcript. 2021-10-25 09:37:06.779 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015393: ['FBtr0079846', 'FBtr0335494'] 2021-10-25 09:37:06.830 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9699937, 9699999)] 2021-10-25 09:37:06.832 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:06.832 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:06.912 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015396: ['FBtr0082237'] 2021-10-25 09:37:06.912 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015396 has a single transcript. 2021-10-25 09:37:06.922 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015399: ['FBtr0332210', 'FBtr0346702'] 2021-10-25 09:37:06.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:06.973 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:06.973 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:07.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015400: ['FBtr0080252'] 2021-10-25 09:37:07.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015400 has a single transcript. 2021-10-25 09:37:07.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015402: ['FBtr0078766', 'FBtr0344272', 'FBtr0344273', 'FBtr0344274'] 2021-10-25 09:37:07.401 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5480095, 5480352)] 2021-10-25 09:37:07.402 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5478389, 5483906, 'FBtr0344273_exon_1') contains intron (5480095, 5480352) 2021-10-25 09:37:07.403 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0344273_exon_1'] 2021-10-25 09:37:07.403 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:07.584 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015477: ['FBtr0088618', 'FBtr0339370'] 2021-10-25 09:37:07.639 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9168249, 9168309), (9168568, 9168672), (9168795, 9168855), (9169231, 9169292), (9169786, 9169842), (9170365, 9170427), (9171601, 9171663), (9171775, 9171832), (9172411, 9172477), (9173245, 9173305), (9173474, 9173531), (9173740, 9173799), (9174141, 9174199), (9174610, 9174667), (9174875, 9174930), (9175109, 9175166), (9175671, 9175732), (9175931, 9176090), (9175934, 9176090), (9176235, 9176392), (9176533, 9176587), (9176832, 9177141)] 2021-10-25 09:37:07.641 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:07.641 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:07.728 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015509: ['FBtr0088845', 'FBtr0088846', 'FBtr0088847', 'FBtr0088848'] 2021-10-25 09:37:07.853 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7917002, 7917080), (7917108, 7917731), (7917311, 7917731), (7917334, 7917731), (7918839, 7918900), (7919947, 7920003)] 2021-10-25 09:37:07.854 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7916953, 7917108, 'FBtr0088846_exon_1') contains intron (7917002, 7917080) 2021-10-25 09:37:07.855 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088846_exon_1'] 2021-10-25 09:37:07.855 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:08.048 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015513: ['FBtr0084459', 'FBtr0304729'] 2021-10-25 09:37:08.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23782388, 23789927), (23790039, 23792066), (23792223, 23792286), (23792556, 23792926), (23794229, 23794291), (23794580, 23794650), (23795001, 23795065), (23795240, 23796384), (23795240, 23797098), (23796498, 23797098), (23799497, 23799563), (23799650, 23799867), (23799958, 23800017), (23800188, 23800250), (23800395, 23800457)] 2021-10-25 09:37:08.116 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:08.117 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:08.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015519: ['FBtr0289988', 'FBtr0339652'] 2021-10-25 09:37:08.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8283157, 8285015), (8286009, 8286133), (8286226, 8286317), (8286464, 8287630), (8287767, 8292249), (8292418, 8301778), (8301894, 8306644), (8306825, 8307005), (8307300, 8329348), (8330141, 8365489), (8365746, 8366803)] 2021-10-25 09:37:08.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:08.266 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:08.349 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015520: ['FBtr0083335', 'FBtr0333727'] 2021-10-25 09:37:08.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:08.412 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:08.412 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:08.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015521: ['FBtr0335131', 'FBtr0077621', 'FBtr0077623', 'FBtr0273293', 'FBtr0077622'] 2021-10-25 09:37:08.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2856175, 2856246), (2856175, 2856222), (2856305, 2856376), (2856568, 2856630), (2856672, 2856768)] 2021-10-25 09:37:08.662 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2856630, 2857029, 'FBtr0335131_exon_4') contains intron (2856672, 2856768) 2021-10-25 09:37:08.663 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2856376, 2856705, 'FBtr0273293_exon_3') contains intron (2856568, 2856630) 2021-10-25 09:37:08.664 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0335131_exon_4', 'FBtr0273293_exon_3'] 2021-10-25 09:37:08.664 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:08.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015522: ['FBtr0086799'] 2021-10-25 09:37:08.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015522 has a single transcript. 2021-10-25 09:37:08.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015524: ['FBtr0110772', 'FBtr0290289', 'FBtr0342795', 'FBtr0342796', 'FBtr0342797', 'FBtr0342798', 'FBtr0342799', 'FBtr0342800'] 2021-10-25 09:37:09.184 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20884761, 20885201), (20885368, 20886522), (20885368, 20886280), (20886406, 20886522), (20886727, 20895710), (20895845, 20896474), (20895866, 20896474), (20896770, 20902027), (20896770, 20897198), (20902293, 20902785)] 2021-10-25 09:37:09.187 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:09.187 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:09.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015527: ['FBtr0077223'] 2021-10-25 09:37:09.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015527 has a single transcript. 2021-10-25 09:37:09.579 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015543: ['FBtr0088037'] 2021-10-25 09:37:09.580 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015543 has a single transcript. 2021-10-25 09:37:09.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015544: ['FBtr0072256'] 2021-10-25 09:37:09.588 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015544 has a single transcript. 2021-10-25 09:37:09.598 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015546: ['FBtr0080630', 'FBtr0344018', 'FBtr0344019', 'FBtr0309281'] 2021-10-25 09:37:09.716 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14362186, 14362245), (14362295, 14362355), (14363140, 14363205), (14364293, 14364372), (14364605, 14364681), (14365237, 14365628)] 2021-10-25 09:37:09.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (14364681, 14366840, 'FBtr0309281_exon_6') contains intron (14365237, 14365628) 2021-10-25 09:37:09.718 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0309281_exon_6'] 2021-10-25 09:37:09.718 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:09.924 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015550: ['FBtr0075216'] 2021-10-25 09:37:09.925 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015550 has a single transcript. 2021-10-25 09:37:09.941 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015553: ['FBtr0081131'] 2021-10-25 09:37:09.941 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015553 has a single transcript. 2021-10-25 09:37:09.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015558: ['FBtr0077224', 'FBtr0333749', 'FBtr0329900', 'FBtr0329901', 'FBtr0329902', 'FBtr0329903'] 2021-10-25 09:37:10.128 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21332365, 21333020), (21333957, 21334038), (21333957, 21334871), (21334050, 21334871), (21335032, 21335166), (21335041, 21335166), (21335930, 21335994), (21336480, 21336774), (21337057, 21338771), (21337059, 21338932), (21337059, 21338771), (21337059, 21338173), (21337059, 21339489)] 2021-10-25 09:37:10.129 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21332926, 21334050, 'FBtr0329900_exon_6') contains intron (21333957, 21334038) 2021-10-25 09:37:10.130 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0329900_exon_6'] 2021-10-25 09:37:10.131 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:10.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015561: ['FBtr0088586'] 2021-10-25 09:37:10.430 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015561 has a single transcript. 2021-10-25 09:37:10.439 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015568: ['FBtr0081544'] 2021-10-25 09:37:10.439 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015568 has a single transcript. 2021-10-25 09:37:10.448 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015569: ['FBtr0289953', 'FBtr0305910', 'FBtr0305911'] 2021-10-25 09:37:10.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7487455, 7487514), (7488226, 7488301), (7488614, 7491340), (7488614, 7493728), (7488614, 7488688)] 2021-10-25 09:37:10.534 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:10.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:10.654 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015570: ['FBtr0081540', 'FBtr0310421'] 2021-10-25 09:37:10.710 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7541967, 7542719), (7542896, 7543036), (7543503, 7543891)] 2021-10-25 09:37:10.711 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:10.711 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:10.773 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015571: ['FBtr0081545', 'FBtr0300496', 'FBtr0310527', 'FBtr0339708'] 2021-10-25 09:37:10.888 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7539501, 7539562), (7540462, 7540823), (7540462, 7540867), (7541132, 7541191), (7541267, 7541577)] 2021-10-25 09:37:10.889 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:10.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.079 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015572: ['FBtr0081546'] 2021-10-25 09:37:11.079 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015572 has a single transcript. 2021-10-25 09:37:11.090 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015574: ['FBtr0081549'] 2021-10-25 09:37:11.090 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015574 has a single transcript. 2021-10-25 09:37:11.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015575: ['FBtr0081550'] 2021-10-25 09:37:11.098 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015575 has a single transcript. 2021-10-25 09:37:11.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015576: ['FBtr0081553'] 2021-10-25 09:37:11.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015576 has a single transcript. 2021-10-25 09:37:11.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015577: ['FBtr0302354', 'FBtr0302355'] 2021-10-25 09:37:11.176 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7495535, 7495932), (7496669, 7496723), (7496874, 7497052), (7497365, 7504513)] 2021-10-25 09:37:11.177 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7495932, 7496874, 'FBtr0302355_exon_3') contains intron (7496669, 7496723) 2021-10-25 09:37:11.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302355_exon_3'] 2021-10-25 09:37:11.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.247 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015582: ['FBtr0088176'] 2021-10-25 09:37:11.247 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015582 has a single transcript. 2021-10-25 09:37:11.256 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015583: ['FBtr0079716'] 2021-10-25 09:37:11.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015583 has a single transcript. 2021-10-25 09:37:11.265 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015584: ['FBtr0087080'] 2021-10-25 09:37:11.265 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015584 has a single transcript. 2021-10-25 09:37:11.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015585: ['FBtr0073182', 'FBtr0346805'] 2021-10-25 09:37:11.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3816046, 3816100), (3816256, 3816317)] 2021-10-25 09:37:11.338 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:11.338 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.415 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015586: ['FBtr0075038', 'FBtr0308781'] 2021-10-25 09:37:11.469 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19050960, 19051032), (19050963, 19051032)] 2021-10-25 09:37:11.469 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:11.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015589: ['FBtr0085351', 'FBtr0336767', 'FBtr0445314'] 2021-10-25 09:37:11.634 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28836486, 28836546), (28836685, 28836898), (28840825, 28842218), (28840825, 28844559)] 2021-10-25 09:37:11.635 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:11.636 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.654 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0085351': ['FBtr0445314']} 2021-10-25 09:37:11.655 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0445314']] 2021-10-25 09:37:11.716 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015591: ['FBtr0084744', 'FBtr0346367'] 2021-10-25 09:37:11.772 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24761328, 24761389), (24761827, 24764852), (24761830, 24764852)] 2021-10-25 09:37:11.774 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:11.774 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:11.854 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015600: ['FBtr0077662', 'FBtr0077663', 'FBtr0077664', 'FBtr0077665', 'FBtr0110903', 'FBtr0112883', 'FBtr0329906', 'FBtr0329907', 'FBtr0335388', 'FBtr0335389'] 2021-10-25 09:37:12.151 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3070731, 3070822), (3071504, 3071568), (3071764, 3080650), (3071764, 3072155), (3080887, 3080993), (3081268, 3089834), (3081268, 3097921), (3081268, 3094216), (3081268, 3086003), (3094375, 3094459), (3094375, 3097921), (3094375, 3108724), (3098065, 3108724), (3098065, 3099452), (3099932, 3107915), (3108861, 3112092), (3108861, 3124014), (3124957, 3125101), (3127790, 3144338)] 2021-10-25 09:37:12.153 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:12.154 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:12.181 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0110903': ['FBtr0329907']} 2021-10-25 09:37:12.182 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329907']] 2021-10-25 09:37:12.575 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015602: ['FBtr0087441', 'FBtr0087442', 'FBtr0305588'] 2021-10-25 09:37:12.668 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14770829, 14771799), (14771642, 14771799)] 2021-10-25 09:37:12.670 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:12.670 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:12.816 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015609: ['FBtr0081016', 'FBtr0081019', 'FBtr0081013', 'FBtr0081017', 'FBtr0081014', 'FBtr0081020', 'FBtr0081015', 'FBtr0081018', 'FBtr0100313', 'FBtr0100314', 'FBtr0100315', 'FBtr0100316'] 2021-10-25 09:37:13.182 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17650505, 17650982), (17651153, 17651278), (17651491, 17652666), (17651491, 17655668), (17652905, 17657062), (17655910, 17657062), (17657233, 17657312), (17659614, 17660955), (17662279, 17664086), (17664224, 17666611), (17664224, 17665378), (17665540, 17667701), (17666776, 17667701), (17667817, 17667966), (17668110, 17708033), (17708220, 17709438), (17709621, 17711219), (17711409, 17714305), (17711409, 17715722), (17714496, 17717842), (17715913, 17716677), (17715913, 17717842), (17716689, 17717842), (17718034, 17718093), (17718327, 17718915), (17719701, 17719924), (17720141, 17720653), (17721104, 17737963), (17739713, 17761291), (17739713, 17751938), (17761355, 17777425), (17777799, 17778214)] 2021-10-25 09:37:13.191 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:13.192 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:13.826 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015614: ['FBtr0088930', 'FBtr0309866'] 2021-10-25 09:37:13.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7786268, 7786499), (7786539, 7787233), (7787532, 7787590)] 2021-10-25 09:37:13.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:13.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:13.960 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015615: ['FBtr0074290'] 2021-10-25 09:37:13.961 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015615 has a single transcript. 2021-10-25 09:37:13.971 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015618: ['FBtr0076369'] 2021-10-25 09:37:13.972 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015618 has a single transcript. 2021-10-25 09:37:13.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015621: ['FBtr0078011'] 2021-10-25 09:37:13.978 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015621 has a single transcript. 2021-10-25 09:37:13.989 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015622: ['FBtr0085437', 'FBtr0085438', 'FBtr0110909', 'FBtr0334873'] 2021-10-25 09:37:14.104 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29315879, 29315944), (29316169, 29316503), (29316169, 29316236), (29316365, 29316719), (29316629, 29316719), (29316860, 29316922), (29317511, 29317835), (29317969, 29318068), (29318140, 29318273), (29318612, 29319230), (29319533, 29319587)] 2021-10-25 09:37:14.106 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29319230, 29319598, 'FBtr0085438_exon_1') contains intron (29319533, 29319587) 2021-10-25 09:37:14.106 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29319230, 29319598, 'FBtr0110909_exon_1') contains intron (29319533, 29319587) 2021-10-25 09:37:14.107 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29319230, 29319598, 'FBtr0334873_exon_1') contains intron (29319533, 29319587) 2021-10-25 09:37:14.107 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085438_exon_1', 'FBtr0110909_exon_1', 'FBtr0334873_exon_1'] 2021-10-25 09:37:14.107 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:14.278 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015623: ['FBtr0079250', 'FBtr0079251', 'FBtr0331223', 'FBtr0331224'] 2021-10-25 09:37:14.404 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6339125, 6342157), (6340054, 6342157), (6341886, 6342157), (6342349, 6342726), (6343069, 6344158), (6343941, 6344158), (6344283, 6344343), (6344945, 6345030), (6345679, 6345742)] 2021-10-25 09:37:14.406 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:14.406 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:14.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015625: ['FBtr0084728', 'FBtr0334578'] 2021-10-25 09:37:14.617 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:14.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:14.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:14.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015663: ['FBtr0077532', 'FBtr0339571'] 2021-10-25 09:37:14.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3620390, 3620508), (3620725, 3620781)] 2021-10-25 09:37:14.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:14.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:14.830 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015664: ['FBtr0079889', 'FBtr0310483'] 2021-10-25 09:37:14.888 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9964867, 9964927), (9965315, 9965375), (9965668, 9965759)] 2021-10-25 09:37:14.890 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:14.890 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:14.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015714: ['FBtr0087451', 'FBtr0345527'] 2021-10-25 09:37:15.026 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14875063, 14875123)] 2021-10-25 09:37:15.027 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:15.027 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:15.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015721: ['FBtr0089600', 'FBtr0342842'] 2021-10-25 09:37:15.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21102617, 21121629), (21121903, 21122000), (21121930, 21122000), (21122468, 21122525), (21122716, 21122773), (21122911, 21122969)] 2021-10-25 09:37:15.162 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:15.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:15.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015737: ['FBtr0085164'] 2021-10-25 09:37:15.245 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015737 has a single transcript. 2021-10-25 09:37:15.257 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015754: ['FBtr0087236', 'FBtr0087240', 'FBtr0087241', 'FBtr0304747'] 2021-10-25 09:37:15.359 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16178877, 16181980), (16178952, 16181980), (16179372, 16181980), (16181805, 16181980), (16182090, 16182157), (16182458, 16182516), (16182673, 16182736), (16182914, 16182982), (16183118, 16183185), (16183537, 16183602)] 2021-10-25 09:37:15.361 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:15.361 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:15.537 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015756: ['FBtr0080163', 'FBtr0080164', 'FBtr0340226'] 2021-10-25 09:37:15.613 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11003238, 11003510), (11003761, 11004005), (11004055, 11004128)] 2021-10-25 09:37:15.614 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11004005, 11004153, 'FBtr0080164_exon_1') contains intron (11004055, 11004128) 2021-10-25 09:37:15.614 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080164_exon_1'] 2021-10-25 09:37:15.615 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:15.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015765: ['FBtr0084580', 'FBtr0084581', 'FBtr0300572'] 2021-10-25 09:37:15.827 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24151745, 24151845), (24151769, 24151845), (24151996, 24152093), (24152141, 24152240)] 2021-10-25 09:37:15.828 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:15.829 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:15.961 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015766: ['FBtr0077131', 'FBtr0077132', 'FBtr0077133', 'FBtr0345001'] 2021-10-25 09:37:16.088 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5567603, 5567731), (5568996, 5569116), (5569361, 5573640), (5569361, 5573631), (5573829, 5576837), (5573829, 5574939), (5574966, 5576837), (5576941, 5577150)] 2021-10-25 09:37:16.090 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:16.091 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:16.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015770: ['FBtr0081585'] 2021-10-25 09:37:16.280 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015770 has a single transcript. 2021-10-25 09:37:16.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015772: ['FBtr0081187', 'FBtr0081189', 'FBtr0340325', 'FBtr0340326'] 2021-10-25 09:37:16.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18960680, 18962884), (18962791, 18962884), (18963115, 18963170), (18963469, 18963992), (18964564, 18964630), (18965183, 18965258), (18965392, 18965455), (18965589, 18968252)] 2021-10-25 09:37:16.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18961115, 18963115, 'FBtr0081189_exon_7') contains intron (18962791, 18962884) 2021-10-25 09:37:16.413 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081189_exon_7'] 2021-10-25 09:37:16.413 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:16.604 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015773: ['FBtr0073942', 'FBtr0308337', 'FBtr0346088'] 2021-10-25 09:37:16.690 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14604627, 14604745), (14605124, 14606482), (14606548, 14610438), (14606548, 14610434), (14610591, 14610660), (14610810, 14620699), (14620888, 14652142)] 2021-10-25 09:37:16.692 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:16.692 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:16.829 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015774: ['FBtr0073940', 'FBtr0331596', 'FBtr0302016', 'FBtr0302017', 'FBtr0302018', 'FBtr0304874', 'FBtr0304875'] 2021-10-25 09:37:17.027 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14691403, 14691658), (14691890, 14691976), (14692042, 14692108), (14692222, 14692305), (14692455, 14693006), (14693195, 14746572), (14748059, 14748649), (14748059, 14748628), (14748921, 14749194), (14748921, 14749284), (14748921, 14749347), (14748924, 14749347), (14748924, 14749284)] 2021-10-25 09:37:17.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:17.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:17.345 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015776: ['FBtr0079384', 'FBtr0332370'] 2021-10-25 09:37:17.403 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6779651, 6779711), (6779971, 6780031), (6780289, 6786281)] 2021-10-25 09:37:17.404 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:17.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:17.487 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015777: ['FBtr0079383', 'FBtr0079381', 'FBtr0079382', 'FBtr0100381', 'FBtr0100382', 'FBtr0332369'] 2021-10-25 09:37:17.658 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6790742, 6790798), (6790967, 6791030), (6791323, 6791517), (6791637, 6791700), (6791841, 6796336), (6791841, 6793227), (6793373, 6794492), (6793404, 6794492), (6793404, 6794316), (6796835, 6797754), (6796835, 6798227), (6798516, 6798678)] 2021-10-25 09:37:17.661 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:17.661 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:17.951 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015778: ['FBtr0082797', 'FBtr0082799', 'FBtr0346346', 'FBtr0346347'] 2021-10-25 09:37:18.056 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13647200, 13648917), (13647269, 13647382), (13647546, 13648917), (13650497, 13650808), (13651059, 13651173)] 2021-10-25 09:37:18.058 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:18.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:18.216 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015781: ['FBtr0083713'] 2021-10-25 09:37:18.217 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015781 has a single transcript. 2021-10-25 09:37:18.226 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015789: ['FBtr0077337'] 2021-10-25 09:37:18.226 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015789 has a single transcript. 2021-10-25 09:37:18.234 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015790: ['FBtr0084011', 'FBtr0084010'] 2021-10-25 09:37:18.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21111466, 21111654), (21111855, 21113945), (21114067, 21114752), (21115101, 21115250)] 2021-10-25 09:37:18.296 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21111407, 21111855, 'FBtr0084010_exon_1') contains intron (21111466, 21111654) 2021-10-25 09:37:18.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084010_exon_1'] 2021-10-25 09:37:18.297 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:18.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015791: ['FBtr0080626', 'FBtr0080627', 'FBtr0343678'] 2021-10-25 09:37:18.458 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14355473, 14357340), (14357271, 14357340), (14357454, 14357519), (14357700, 14357754), (14357937, 14358005)] 2021-10-25 09:37:18.460 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:18.461 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:18.600 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015793: ['FBtr0076705', 'FBtr0331832'] 2021-10-25 09:37:18.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8297089, 8297211), (8297472, 8297534), (8297619, 8297814), (8298071, 8298119)] 2021-10-25 09:37:18.654 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:18.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:18.731 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015794: ['FBtr0070849'] 2021-10-25 09:37:18.731 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015794 has a single transcript. 2021-10-25 09:37:18.742 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015795: ['FBtr0084503', 'FBtr0308611', 'FBtr0308612'] 2021-10-25 09:37:18.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23993140, 23993945), (23993276, 23993945), (23993819, 23993945), (23994181, 23994245), (23994602, 23994663)] 2021-10-25 09:37:18.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:18.827 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:18.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015797: ['FBtr0080361', 'FBtr0346437'] 2021-10-25 09:37:19.013 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:19.015 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:19.015 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:19.093 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015799: ['FBtr0070146'] 2021-10-25 09:37:19.094 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015799 has a single transcript. 2021-10-25 09:37:19.106 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015801: ['FBtr0072427', 'FBtr0305671'] 2021-10-25 09:37:19.158 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24788850, 24788978), (24789168, 24792790)] 2021-10-25 09:37:19.159 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24788007, 24789168, 'FBtr0305671_exon_2') contains intron (24788850, 24788978) 2021-10-25 09:37:19.160 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305671_exon_2'] 2021-10-25 09:37:19.160 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:19.244 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015803: ['FBtr0081356', 'FBtr0081357', 'FBtr0112885', 'FBtr0336747', 'FBtr0336748', 'FBtr0336749', 'FBtr0302106'] 2021-10-25 09:37:19.466 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20350894, 20355362), (20354067, 20355362), (20355747, 20355805), (20356006, 20356084), (20356505, 20356561), (20356801, 20356875), (20356801, 20360012), (20359183, 20360012), (20360433, 20360563), (20360812, 20361968), (20360812, 20364296), (20362826, 20364296)] 2021-10-25 09:37:19.470 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:19.470 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:19.803 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015805: ['FBtr0073317'] 2021-10-25 09:37:19.804 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015805 has a single transcript. 2021-10-25 09:37:19.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015808: ['FBtr0081109'] 2021-10-25 09:37:19.814 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015808 has a single transcript. 2021-10-25 09:37:19.821 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015818: ['FBtr0070894'] 2021-10-25 09:37:19.822 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015818 has a single transcript. 2021-10-25 09:37:19.831 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015828: ['FBtr0076108'] 2021-10-25 09:37:19.831 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015828 has a single transcript. 2021-10-25 09:37:19.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015829: ['FBtr0073234', 'FBtr0300449'] 2021-10-25 09:37:19.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4287211, 4287283), (4287388, 4287463), (4287626, 4287686), (4287977, 4288033)] 2021-10-25 09:37:19.895 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (4287037, 4287388, 'FBtr0300449_exon_1') contains intron (4287211, 4287283) 2021-10-25 09:37:19.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300449_exon_1'] 2021-10-25 09:37:19.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:19.972 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015831: ['FBtr0307275', 'FBtr0307276'] 2021-10-25 09:37:20.028 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7529247, 7529319), (7529826, 7530163)] 2021-10-25 09:37:20.029 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:20.029 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:20.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015834: ['FBtr0079053'] 2021-10-25 09:37:20.110 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015834 has a single transcript. 2021-10-25 09:37:20.120 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015838: ['FBtr0088566', 'FBtr0330624'] 2021-10-25 09:37:20.172 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9103816, 9103883)] 2021-10-25 09:37:20.174 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:20.174 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:20.186 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088566': ['FBtr0330624']} 2021-10-25 09:37:20.186 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330624']] 2021-10-25 09:37:20.204 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015872: ['FBtr0088141', 'FBtr0088142', 'FBtr0331387', 'FBtr0331388', 'FBtr0331389', 'FBtr0331390', 'FBtr0339488'] 2021-10-25 09:37:20.411 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11411280, 11411357), (11411280, 11412427), (11411535, 11412427), (11412574, 11412631), (11412985, 11421257), (11421436, 11427775), (11421436, 11424534), (11421436, 11429052), (11421436, 11427441), (11429218, 11429519)] 2021-10-25 09:37:20.412 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11429052, 11429645, 'FBtr0088141_exon_1') contains intron (11429218, 11429519) 2021-10-25 09:37:20.413 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11429052, 11429645, 'FBtr0331390_exon_1') contains intron (11429218, 11429519) 2021-10-25 09:37:20.414 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11429052, 11429645, 'FBtr0339488_exon_1') contains intron (11429218, 11429519) 2021-10-25 09:37:20.414 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088141_exon_1', 'FBtr0331390_exon_1', 'FBtr0339488_exon_1'] 2021-10-25 09:37:20.414 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:20.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015903: ['FBtr0072066', 'FBtr0072067', 'FBtr0072068', 'FBtr0072069', 'FBtr0072070', 'FBtr0332926'] 2021-10-25 09:37:20.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23565050, 23596891), (23565050, 23581314), (23565050, 23583808), (23568392, 23596891), (23581468, 23596891), (23583975, 23596891), (23596798, 23596891), (23596997, 23597059), (23597320, 23597383), (23597630, 23597692)] 2021-10-25 09:37:20.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:20.917 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:21.221 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015904: ['FBtr0075908', 'FBtr0300551'] 2021-10-25 09:37:21.278 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12581153, 12585741), (12586293, 12589518), (12589634, 12594164), (12589634, 12594188), (12594523, 12594585)] 2021-10-25 09:37:21.279 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:21.279 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:21.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015905: ['FBtr0077952'] 2021-10-25 09:37:21.413 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015905 has a single transcript. 2021-10-25 09:37:21.422 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015919: ['FBtr0075909'] 2021-10-25 09:37:21.423 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015919 has a single transcript. 2021-10-25 09:37:21.433 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015924: ['FBtr0078087', 'FBtr0078088', 'FBtr0331232', 'FBtr0331233', 'FBtr0304741'] 2021-10-25 09:37:21.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(449170, 449229), (449320, 449434), (450540, 450665), (450878, 452576), (450878, 451229), (452736, 452797), (452736, 452986)] 2021-10-25 09:37:21.572 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (452576, 453024, 'FBtr0078087_exon_1') contains intron (452736, 452797) 2021-10-25 09:37:21.574 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078087_exon_1'] 2021-10-25 09:37:21.574 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:21.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015925: ['FBtr0089871', 'FBtr0089872'] 2021-10-25 09:37:21.872 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16265122, 16265166), (16265122, 16265181), (16265626, 16265687), (16265853, 16265913), (16266076, 16266141), (16266653, 16266718)] 2021-10-25 09:37:21.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:21.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:21.954 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015926: ['FBtr0074007', 'FBtr0330404'] 2021-10-25 09:37:22.008 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15328672, 15328735), (15328952, 15329009), (15328952, 15329018), (15329867, 15329931), (15330049, 15330111), (15330271, 15330333)] 2021-10-25 09:37:22.010 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:22.010 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:22.087 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015929: ['FBtr0088982', 'FBtr0345797'] 2021-10-25 09:37:22.140 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7496896, 7496956), (7497409, 7497478), (7497845, 7497906), (7498278, 7498338), (7499267, 7499326), (7499637, 7499701)] 2021-10-25 09:37:22.142 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:22.142 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:22.217 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015946: ['FBtr0075130'] 2021-10-25 09:37:22.218 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0015946 has a single transcript. 2021-10-25 09:37:22.232 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0015949: ['FBtr0111010', 'FBtr0086483', 'FBtr0086484', 'FBtr0330248'] 2021-10-25 09:37:22.342 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19664484, 19664546), (19664666, 19665524), (19666230, 19666294), (19666567, 19666627), (19667209, 19667267), (19667464, 19667527), (19668286, 19668353), (19668478, 19668789), (19668478, 19669117), (19668478, 19669246)] 2021-10-25 09:37:22.345 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:22.345 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:22.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016013: ['FBtr0073278'] 2021-10-25 09:37:22.507 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016013 has a single transcript. 2021-10-25 09:37:22.520 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016031: ['FBtr0077159', 'FBtr0077160', 'FBtr0077161', 'FBtr0333595'] 2021-10-25 09:37:22.640 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5345595, 5345655), (5345772, 5345836), (5346500, 5347627), (5347683, 5351318), (5347683, 5354614), (5347683, 5353678), (5347683, 5355693), (5353787, 5354614)] 2021-10-25 09:37:22.642 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:22.642 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:22.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016032: ['FBtr0089033', 'FBtr0336873'] 2021-10-25 09:37:22.884 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7049306, 7050033), (7049965, 7050033), (7050103, 7051062), (7051221, 7051277), (7051613, 7051675)] 2021-10-25 09:37:22.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:22.886 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:22.965 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016034: ['FBtr0089633', 'FBtr0089631', 'FBtr0089632', 'FBtr0347062'] 2021-10-25 09:37:23.073 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22721475, 22724192), (22724412, 22724483), (22724685, 22724730), (22724685, 22724739), (22724929, 22724985), (22725542, 22725604)] 2021-10-25 09:37:23.074 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22724232, 22724685, 'FBtr0089631_exon_1') contains intron (22724412, 22724483) 2021-10-25 09:37:23.075 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22724232, 22724685, 'FBtr0089632_exon_1') contains intron (22724412, 22724483) 2021-10-25 09:37:23.075 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22724192, 22724685, 'FBtr0347062_exon_2') contains intron (22724412, 22724483) 2021-10-25 09:37:23.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089631_exon_1', 'FBtr0089632_exon_1', 'FBtr0347062_exon_2'] 2021-10-25 09:37:23.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:23.267 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016036: ['FBtr0076836'] 2021-10-25 09:37:23.267 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016036 has a single transcript. 2021-10-25 09:37:23.281 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016038: ['FBtr0089726', 'FBtr0089723', 'FBtr0089724', 'FBtr0089725', 'FBtr0335122', 'FBtr0335123'] 2021-10-25 09:37:23.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(621789, 621841), (621797, 621852), (621797, 621890), (621797, 621841), (622146, 622206), (622358, 622433), (622358, 622445)] 2021-10-25 09:37:23.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:23.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:23.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016041: ['FBtr0071073', 'FBtr0071074', 'FBtr0333748'] 2021-10-25 09:37:23.833 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7737166, 7737321), (7737166, 7737449), (7737683, 7737872), (7738135, 7738381), (7738799, 7738900)] 2021-10-25 09:37:23.835 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:23.836 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:23.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016047: ['FBtr0089379', 'FBtr0089380', 'FBtr0089381', 'FBtr0089382', 'FBtr0339483'] 2021-10-25 09:37:24.121 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11310667, 11311220), (11310667, 11311158), (11311346, 11311415), (11311679, 11311731), (11311901, 11311958), (11312610, 11312666), (11312806, 11312882), (11313061, 11313135), (11313317, 11313404), (11313864, 11313972), (11313864, 11314838), (11314725, 11314838), (11314967, 11315022), (11315283, 11315354), (11315467, 11315750), (11315937, 11316106), (11316249, 11316318), (11316451, 11316508), (11316790, 11316847), (11317195, 11317420), (11317621, 11318559)] 2021-10-25 09:37:24.125 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:24.125 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:24.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016053: ['FBtr0112519', 'FBtr0112520', 'FBtr0342987'] 2021-10-25 09:37:24.444 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22330243, 22332171), (22330768, 22332171)] 2021-10-25 09:37:24.445 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:24.445 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:24.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016054: ['FBtr0081404', 'FBtr0081405', 'FBtr0336829', 'FBtr0336830'] 2021-10-25 09:37:24.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20644600, 20644663), (20645361, 20645416), (20645451, 20645668)] 2021-10-25 09:37:24.671 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20644663, 20645451, 'FBtr0081405_exon_2') contains intron (20645361, 20645416) 2021-10-25 09:37:24.672 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20644663, 20645457, 'FBtr0336829_exon_1') contains intron (20645361, 20645416) 2021-10-25 09:37:24.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081405_exon_2', 'FBtr0336829_exon_1'] 2021-10-25 09:37:24.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:24.827 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016059: ['FBtr0086890', 'FBtr0086891', 'FBtr0302161'] 2021-10-25 09:37:24.914 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17674508, 17674571), (17674764, 17674826), (17675837, 17675910), (17676593, 17677825), (17677919, 17678271), (17678782, 17682894), (17678782, 17679059), (17678782, 17683392)] 2021-10-25 09:37:24.915 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:24.916 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:25.054 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016061: ['FBtr0085168', 'FBtr0309179', 'FBtr0309180', 'FBtr0289998'] 2021-10-25 09:37:25.162 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27376646, 27380964), (27376646, 27382307), (27376658, 27382307), (27381105, 27382307), (27382555, 27384201), (27384469, 27387059), (27387234, 27388454), (27388681, 27389615), (27389766, 27390889), (27391038, 27392706), (27392845, 27395008), (27395145, 27396443), (27396579, 27397788), (27397958, 27398173), (27398386, 27398888), (27398999, 27399071), (27399286, 27400295), (27400428, 27418242), (27418980, 27436611), (27418980, 27436922), (27418980, 27436189)] 2021-10-25 09:37:25.165 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27375087, 27382555, 'FBtr0289998_exon_16') contains intron (27376646, 27380964) 2021-10-25 09:37:25.165 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0289998_exon_16'] 2021-10-25 09:37:25.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:25.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016070: ['FBtr0076549', 'FBtr0076550', 'FBtr0076551', 'FBtr0290103', 'FBtr0290104'] 2021-10-25 09:37:25.521 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8991157, 8991221), (8991537, 8992452), (8991537, 8992043), (8993041, 8993098), (8995565, 8997578), (8995565, 8995722), (8995565, 8996853), (8995565, 8996061), (8995917, 8996481)] 2021-10-25 09:37:25.523 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8990316, 8991537, 'FBtr0076550_exon_4') contains intron (8991157, 8991221) 2021-10-25 09:37:25.523 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8990316, 8991537, 'FBtr0076551_exon_5') contains intron (8991157, 8991221) 2021-10-25 09:37:25.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8990316, 8991537, 'FBtr0290103_exon_4') contains intron (8991157, 8991221) 2021-10-25 09:37:25.524 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (8990316, 8991537, 'FBtr0290104_exon_4') contains intron (8991157, 8991221) 2021-10-25 09:37:25.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076550_exon_4', 'FBtr0076551_exon_5', 'FBtr0290103_exon_4', 'FBtr0290104_exon_4'] 2021-10-25 09:37:25.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:25.741 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016075: ['FBtr0079036', 'FBtr0333540', 'FBtr0333541'] 2021-10-25 09:37:25.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5013144, 5013211), (5013435, 5013496), (5013611, 5013674), (5015592, 5015690), (5018301, 5018467), (5018512, 5018574), (5018757, 5027036), (5027221, 5027351), (5027221, 5028118), (5027221, 5027297)] 2021-10-25 09:37:25.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:25.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:25.953 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016076: ['FBtr0079070', 'FBtr0079071', 'FBtr0300020', 'FBtr0342936', 'FBtr0346579'] 2021-10-25 09:37:26.109 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5289509, 5307564), (5299751, 5307564), (5306166, 5307564), (5307912, 5308020)] 2021-10-25 09:37:26.111 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:26.112 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:26.355 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016078: ['FBtr0088552', 'FBtr0088553', 'FBtr0306111'] 2021-10-25 09:37:26.435 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9401148, 9402408), (9402234, 9402408), (9402585, 9402655), (9402835, 9403706), (9403925, 9404306), (9404458, 9409212), (9409653, 9413224)] 2021-10-25 09:37:26.437 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:26.437 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:26.549 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016080: ['FBtr0074405'] 2021-10-25 09:37:26.550 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016080 has a single transcript. 2021-10-25 09:37:26.576 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016081: ['FBtr0076417', 'FBtr0301435', 'FBtr0306240', 'FBtr0306241', 'FBtr0306242', 'FBtr0333858', 'FBtr0333859', 'FBtr0333860'] 2021-10-25 09:37:26.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9632170, 9632232), (9632173, 9632232), (9632599, 9632657), (9632903, 9632964), (9633924, 9634403), (9633924, 9634021), (9633924, 9634686), (9634069, 9634686), (9634433, 9634686), (9635313, 9635680), (9636187, 9636254), (9637833, 9642006), (9642342, 9642407), (9642513, 9642585), (9642757, 9642822), (9642957, 9643027), (9643126, 9643207), (9643341, 9643427), (9643547, 9660641), (9660805, 9662942), (9663097, 9663165), (9663276, 9663362), (9663517, 9663620), (9663790, 9663861), (9664011, 9664076), (9664244, 9667701), (9664244, 9665555), (9665699, 9667701), (9667884, 9667948), (9668180, 9668250), (9669638, 9669708), (9670049, 9670110), (9671708, 9674800), (9671708, 9678771)] 2021-10-25 09:37:26.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:26.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:27.259 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016119: ['FBtr0084432', 'FBtr0333777', 'FBtr0305982'] 2021-10-25 09:37:27.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23355569, 23355633), (23355785, 23355980), (23355785, 23355862)] 2021-10-25 09:37:27.343 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:27.343 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:27.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016120: ['FBtr0083727', 'FBtr0083728', 'FBtr0346155'] 2021-10-25 09:37:27.557 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19095021, 19095396), (19095074, 19095396)] 2021-10-25 09:37:27.558 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:27.559 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:27.691 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016122: ['FBtr0079685', 'FBtr0333416'] 2021-10-25 09:37:27.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8522325, 8522401), (8522966, 8523442), (8524684, 8524742)] 2021-10-25 09:37:27.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:27.750 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:27.828 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016123: ['FBtr0085733', 'FBtr0085734'] 2021-10-25 09:37:27.883 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31049319, 31050651), (31050067, 31050651), (31050893, 31050960), (31051924, 31051984)] 2021-10-25 09:37:27.884 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:27.884 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:27.968 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016126: ['FBtr0089069', 'FBtr0089063', 'FBtr0089065', 'FBtr0089067', 'FBtr0333670'] 2021-10-25 09:37:28.106 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(445648, 447100), (446486, 446630), (446751, 446820), (447035, 447100), (447235, 449923), (447235, 450241), (449968, 450241), (450316, 450370), (450509, 451189), (451454, 452617), (452744, 452802), (452890, 452971)] 2021-10-25 09:37:28.108 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (445503, 447035, 'FBtr0089065_exon_1') contains intron (446486, 446630) 2021-10-25 09:37:28.109 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (446630, 447035, 'FBtr0333670_exon_2') contains intron (446751, 446820) 2021-10-25 09:37:28.109 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089065_exon_1', 'FBtr0333670_exon_2'] 2021-10-25 09:37:28.110 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:28.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016131: ['FBtr0087102', 'FBtr0087103', 'FBtr0087104', 'FBtr0340063', 'FBtr0345340'] 2021-10-25 09:37:28.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16579533, 16580841), (16579926, 16580841), (16580693, 16580841), (16581015, 16582870), (16583036, 16584151), (16584287, 16584349), (16584678, 16584743), (16584879, 16584951)] 2021-10-25 09:37:28.488 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:28.489 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:28.730 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016641: ['FBtr0071686'] 2021-10-25 09:37:28.730 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016641 has a single transcript. 2021-10-25 09:37:28.744 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016650: ['FBtr0083509', 'FBtr0083510'] 2021-10-25 09:37:28.795 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17725982, 17728253), (17725982, 17728323), (17728706, 17729213), (17729368, 17729456), (17729531, 17729611), (17729689, 17730166), (17730241, 17730302), (17730368, 17730431), (17730500, 17730555), (17730630, 17730697), (17730815, 17730874), (17731236, 17731299), (17731452, 17731593), (17731739, 17731810), (17732039, 17732107), (17732303, 17732373), (17732570, 17732638)] 2021-10-25 09:37:28.797 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:28.797 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:28.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016660: ['FBtr0079076', 'FBtr0343225'] 2021-10-25 09:37:28.922 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5405192, 5406910), (5407374, 5407686), (5407374, 5407683), (5407817, 5413011), (5413297, 5413964), (5414209, 5415353)] 2021-10-25 09:37:28.923 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:28.923 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.001 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016672: ['FBtr0082865'] 2021-10-25 09:37:29.002 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016672 has a single transcript. 2021-10-25 09:37:29.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016675: ['FBtr0081201', 'FBtr0302360'] 2021-10-25 09:37:29.067 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19417550, 19417619)] 2021-10-25 09:37:29.068 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:29.069 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.146 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016684: ['FBtr0087463', 'FBtr0329884'] 2021-10-25 09:37:29.195 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14843643, 14843707), (14843949, 14844020), (14844153, 14844212), (14844665, 14844719), (14844965, 14845081), (14845296, 14845427)] 2021-10-25 09:37:29.197 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:29.197 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.274 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016685: ['FBtr0085552', 'FBtr0334701'] 2021-10-25 09:37:29.331 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30005055, 30005287), (30005421, 30009677)] 2021-10-25 09:37:29.332 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:29.332 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016687: ['FBtr0072343', 'FBtr0273253', 'FBtr0305985'] 2021-10-25 09:37:29.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24559132, 24559454), (24559564, 24559622), (24559774, 24559829), (24560225, 24560291), (24560410, 24560852)] 2021-10-25 09:37:29.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:29.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016691: ['FBtr0083063'] 2021-10-25 09:37:29.616 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016691 has a single transcript. 2021-10-25 09:37:29.625 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016693: ['FBtr0082654', 'FBtr0082655'] 2021-10-25 09:37:29.679 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12697538, 12698118), (12699335, 12703638), (12703812, 12703875)] 2021-10-25 09:37:29.680 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:29.680 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:29.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016694: ['FBtr0076775', 'FBtr0076776', 'FBtr0076777', 'FBtr0076780', 'FBtr0076782', 'FBtr0300499', 'FBtr0300500', 'FBtr0346536', 'FBtr0306535', 'FBtr0332080', 'FBtr0332081', 'FBtr0332082', 'FBtr0332083'] 2021-10-25 09:37:30.150 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7816412, 7816483), (7816611, 7817436), (7816725, 7817436), (7816740, 7817436), (7817662, 7818077), (7817662, 7818068), (7818223, 7819987), (7818223, 7830386), (7818223, 7853182), (7818223, 7867240), (7818223, 7825583), (7820029, 7825583), (7820029, 7853182), (7820029, 7830386), (7820029, 7867240), (7826705, 7827675), (7827287, 7827675), (7831810, 7832553), (7831827, 7832553), (7854189, 7855278)] 2021-10-25 09:37:30.151 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7853182, 7855548, 'FBtr0076776_exon_1') contains intron (7854189, 7855278) 2021-10-25 09:37:30.152 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7853182, 7855548, 'FBtr0076777_exon_1') contains intron (7854189, 7855278) 2021-10-25 09:37:30.154 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7853182, 7855548, 'FBtr0332081_exon_1') contains intron (7854189, 7855278) 2021-10-25 09:37:30.155 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7853182, 7855548, 'FBtr0332082_exon_1') contains intron (7854189, 7855278) 2021-10-25 09:37:30.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076776_exon_1', 'FBtr0076777_exon_1', 'FBtr0332081_exon_1', 'FBtr0332082_exon_1'] 2021-10-25 09:37:30.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:30.817 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016696: ['FBtr0078247', 'FBtr0078250', 'FBtr0304935', 'FBtr0304936', 'FBtr0331523'] 2021-10-25 09:37:30.957 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20771608, 20771667), (20771864, 20773115), (20771864, 20772604), (20771864, 20773793), (20772963, 20773793), (20776053, 20776173)] 2021-10-25 09:37:30.958 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20771527, 20771864, 'FBtr0078247_exon_1') contains intron (20771608, 20771667) 2021-10-25 09:37:30.959 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20772604, 20776053, 'FBtr0304935_exon_3') contains intron (20772963, 20773793) 2021-10-25 09:37:30.960 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20771527, 20771864, 'FBtr0304936_exon_1') contains intron (20771608, 20771667) 2021-10-25 09:37:30.960 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20771527, 20771864, 'FBtr0331523_exon_1') contains intron (20771608, 20771667) 2021-10-25 09:37:30.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078247_exon_1', 'FBtr0304935_exon_3', 'FBtr0304936_exon_1', 'FBtr0331523_exon_1'] 2021-10-25 09:37:30.961 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:31.199 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016697: ['FBtr0086910', 'FBtr0086911'] 2021-10-25 09:37:31.252 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17412843, 17412904), (17413043, 17413101)] 2021-10-25 09:37:31.254 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17412838, 17413043, 'FBtr0086911_exon_1') contains intron (17412843, 17412904) 2021-10-25 09:37:31.254 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086911_exon_1'] 2021-10-25 09:37:31.255 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:31.335 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016698: ['FBtr0077589'] 2021-10-25 09:37:31.335 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016698 has a single transcript. 2021-10-25 09:37:31.346 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016701: ['FBtr0086829', 'FBtr0086830'] 2021-10-25 09:37:31.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17573521, 17573620), (17573714, 17573783), (17573864, 17573934), (17574267, 17574330)] 2021-10-25 09:37:31.397 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17573461, 17573714, 'FBtr0086830_exon_1') contains intron (17573521, 17573620) 2021-10-25 09:37:31.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086830_exon_1'] 2021-10-25 09:37:31.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:31.469 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016715: ['FBtr0072561'] 2021-10-25 09:37:31.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016715 has a single transcript. 2021-10-25 09:37:31.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016726: ['FBtr0071592', 'FBtr0071593', 'FBtr0305669'] 2021-10-25 09:37:31.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21293789, 21293849), (21293789, 21294053), (21293874, 21294053), (21294161, 21294230)] 2021-10-25 09:37:31.562 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21293767, 21293874, 'FBtr0071593_exon_1') contains intron (21293789, 21293849) 2021-10-25 09:37:31.563 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071593_exon_1'] 2021-10-25 09:37:31.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:31.696 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016754: ['FBtr0112888', 'FBtr0112889', 'FBtr0330380', 'FBtr0308562', 'FBtr0308563', 'FBtr0308564', 'FBtr0335206'] 2021-10-25 09:37:31.894 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23895426, 23897062), (23895497, 23896849), (23895497, 23896208), (23895497, 23897062), (23896608, 23897062), (23897191, 23897252), (23897346, 23897406), (23899793, 23903127), (23903461, 23913795), (23913919, 23920006), (23920846, 23922895), (23920846, 23921517), (23921709, 23922895), (23921780, 23922895)] 2021-10-25 09:37:31.895 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23896208, 23897191, 'FBtr0112888_exon_8') contains intron (23896608, 23897062) 2021-10-25 09:37:31.897 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0112888_exon_8'] 2021-10-25 09:37:31.898 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:31.928 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0112889': ['FBtr0330380']} 2021-10-25 09:37:31.928 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330380']] 2021-10-25 09:37:32.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016756: ['FBtr0077095', 'FBtr0077096', 'FBtr0306259'] 2021-10-25 09:37:32.234 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5753234, 5755553), (5753234, 5756204), (5754266, 5756204), (5755625, 5756204), (5756433, 5756496), (5757121, 5757175), (5758148, 5758206), (5758594, 5758653), (5759571, 5759628), (5760609, 5760674), (5760801, 5760859), (5760930, 5760984), (5761118, 5761173)] 2021-10-25 09:37:32.236 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5756496, 5758148, 'FBtr0077095_exon_3') contains intron (5757121, 5757175) 2021-10-25 09:37:32.237 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (5756496, 5758148, 'FBtr0077096_exon_3') contains intron (5757121, 5757175) 2021-10-25 09:37:32.237 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077095_exon_3', 'FBtr0077096_exon_3'] 2021-10-25 09:37:32.238 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:32.372 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016762: ['FBtr0072083'] 2021-10-25 09:37:32.373 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016762 has a single transcript. 2021-10-25 09:37:32.384 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016794: ['FBtr0072927', 'FBtr0072926'] 2021-10-25 09:37:32.439 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2589552, 2592161), (2589552, 2590201), (2591613, 2592161), (2592486, 2592552), (2593319, 2593387), (2593499, 2593560), (2593801, 2593864), (2594465, 2594521)] 2021-10-25 09:37:32.440 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:32.440 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:32.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016797: ['FBtr0075028', 'FBtr0075029', 'FBtr0112890', 'FBtr0299586', 'FBtr0330194', 'FBtr0330195', 'FBtr0332735'] 2021-10-25 09:37:32.729 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19146473, 19146663), (19146473, 19160618), (19160685, 19169843), (19160685, 19185667), (19160685, 19170518), (19160685, 19170452), (19185715, 19199471), (19185715, 19211466), (19199514, 19211466), (19211511, 19232323), (19232572, 19234804), (19232572, 19235013)] 2021-10-25 09:37:32.731 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:32.732 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:33.078 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016917: ['FBtr0089487', 'FBtr0089486', 'FBtr0089485', 'FBtr0089484', 'FBtr0100457', 'FBtr0334581', 'FBtr0334582', 'FBtr0334583', 'FBtr0334584', 'FBtr0334585', 'FBtr0334586'] 2021-10-25 09:37:33.396 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20536545, 20537193), (20537463, 20538452), (20537463, 20539220), (20537463, 20538544), (20538715, 20539220), (20539335, 20539399), (20539356, 20539399), (20539600, 20539658), (20539916, 20539974), (20540454, 20540522), (20541553, 20550720), (20541553, 20541679), (20541553, 20552080), (20542092, 20552080), (20542092, 20550720)] 2021-10-25 09:37:33.401 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:33.401 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:33.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016919: ['FBtr0301173', 'FBtr0340651'] 2021-10-25 09:37:33.952 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21578529, 21578589), (21578529, 21578730), (21578676, 21578730), (21579624, 21581618), (21579637, 21581616), (21581816, 21586399), (21587120, 21587192), (21587141, 21587192), (21587418, 21588976), (21589173, 21589226)] 2021-10-25 09:37:33.953 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:33.953 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:34.050 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016920: ['FBtr0300012', 'FBtr0343224', 'FBtr0304843', 'FBtr0347408', 'FBtr0347409'] 2021-10-25 09:37:34.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5347229, 5348436), (5348538, 5352079), (5352181, 5353546), (5353663, 5355192), (5355285, 5356181), (5356395, 5356625), (5356921, 5356975), (5357278, 5357336), (5358764, 5358825), (5359362, 5359430), (5359637, 5359711), (5360405, 5361997), (5360405, 5362582), (5360405, 5360791), (5360878, 5361997), (5360878, 5362582), (5362209, 5363655), (5362812, 5363655), (5363784, 5364308), (5364417, 5364773), (5364426, 5364773)] 2021-10-25 09:37:34.205 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:34.206 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:34.432 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016926: ['FBtr0077987', 'FBtr0077988', 'FBtr0332272'] 2021-10-25 09:37:34.523 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1115943, 1116440), (1116690, 1117443), (1117516, 1117866), (1117516, 1128128), (1117516, 1118565), (1117917, 1118565), (1128345, 1128803)] 2021-10-25 09:37:34.524 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:34.525 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:34.666 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016930: ['FBtr0089290', 'FBtr0089289', 'FBtr0089288', 'FBtr0100447', 'FBtr0100448', 'FBtr0329933', 'FBtr0336949'] 2021-10-25 09:37:34.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14187153, 14188863), (14189035, 14189094), (14189233, 14195732), (14196010, 14196074), (14196247, 14196926), (14197293, 14197362), (14197293, 14197656), (14197867, 14217026), (14217069, 14222016), (14222081, 14229458), (14222081, 14233647), (14222081, 14229531), (14229536, 14233578), (14229536, 14233893), (14229536, 14233647)] 2021-10-25 09:37:34.871 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:34.872 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:35.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016970: ['FBtr0088505'] 2021-10-25 09:37:35.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0016970 has a single transcript. 2021-10-25 09:37:35.206 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016974: ['FBtr0070923', 'FBtr0334014'] 2021-10-25 09:37:35.264 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6362035, 6362088), (6362835, 6362900), (6362835, 6363110)] 2021-10-25 09:37:35.265 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:35.265 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:35.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016975: ['FBtr0302020', 'FBtr0302021', 'FBtr0344111', 'FBtr0344466'] 2021-10-25 09:37:35.458 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22982550, 22982620), (22982831, 22984595), (22984777, 22984836), (22985088, 22985304), (22986568, 22990167), (22990774, 22990837), (22991790, 22992562), (22994003, 22994483), (22995788, 23004611), (22995914, 23004611), (22995914, 23004549)] 2021-10-25 09:37:35.459 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0302020_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.460 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0302021_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.461 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0344111_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.462 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302020_exon_4', 'FBtr0302021_exon_4', 'FBtr0344111_exon_4'] 2021-10-25 09:37:35.462 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:35.633 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016976: ['FBtr0301618', 'FBtr0301619', 'FBtr0344112', 'FBtr0344465'] 2021-10-25 09:37:35.760 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22982550, 22982620), (22982831, 22984595), (22984777, 22984836), (22985088, 22985304), (22986568, 22990167), (22990774, 22990837), (22991790, 22992562), (22994003, 22994483), (22995788, 23004611), (22995914, 23004611), (22995914, 23004549)] 2021-10-25 09:37:35.762 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0301618_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.763 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0301619_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.764 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22990167, 22991790, 'FBtr0344112_exon_4') contains intron (22990774, 22990837) 2021-10-25 09:37:35.764 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301618_exon_4', 'FBtr0301619_exon_4', 'FBtr0344112_exon_4'] 2021-10-25 09:37:35.765 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:35.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016977: ['FBtr0078122', 'FBtr0078121', 'FBtr0078123', 'FBtr0332336', 'FBtr0332337', 'FBtr0306341', 'FBtr0330652', 'FBtr0330653'] 2021-10-25 09:37:36.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(159819, 160008), (159819, 162591), (159823, 162591), (163001, 183760), (163001, 164158), (163001, 175360), (164234, 175360), (175447, 183760), (182913, 183760), (183419, 183760), (185082, 185151), (186123, 186192), (186855, 186909), (187016, 187481), (199575, 199636), (199743, 200119), (199743, 199902), (199983, 200119), (200315, 200375), (200675, 200741), (201061, 201126)] 2021-10-25 09:37:36.212 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0078122_exon_5') contains intron (186855, 186909) 2021-10-25 09:37:36.213 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0078121_exon_5') contains intron (186855, 186909) 2021-10-25 09:37:36.213 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0078123_exon_4') contains intron (186855, 186909) 2021-10-25 09:37:36.215 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0306341_exon_6') contains intron (186855, 186909) 2021-10-25 09:37:36.216 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0330652_exon_7') contains intron (186855, 186909) 2021-10-25 09:37:36.217 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (186192, 187016, 'FBtr0330653_exon_4') contains intron (186855, 186909) 2021-10-25 09:37:36.217 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0078122_exon_5', 'FBtr0078121_exon_5', 'FBtr0078123_exon_4', 'FBtr0306341_exon_6', 'FBtr0330652_exon_7', 'FBtr0330653_exon_4'] 2021-10-25 09:37:36.217 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:36.629 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016978: ['FBtr0079355', 'FBtr0331375'] 2021-10-25 09:37:36.689 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6971509, 6971588)] 2021-10-25 09:37:36.690 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:36.691 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:36.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016983: ['FBtr0076851', 'FBtr0301611', 'FBtr0331849', 'FBtr0331850', 'FBtr0333404'] 2021-10-25 09:37:36.904 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7381686, 7382210), (7382011, 7382210), (7382154, 7382210), (7382334, 7382386), (7382731, 7382787), (7382731, 7382893), (7382731, 7382784), (7382835, 7382893), (7383234, 7383300), (7384587, 7384648), (7384981, 7385049), (7385274, 7385336)] 2021-10-25 09:37:36.906 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:36.907 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:37.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0016984: ['FBtr0071563', 'FBtr0342801', 'FBtr0344196'] 2021-10-25 09:37:37.229 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20830393, 20831783), (20830393, 20835669)] 2021-10-25 09:37:37.230 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:37.230 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:37.360 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017414: ['FBtr0088239', 'FBtr0331937'] 2021-10-25 09:37:37.418 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10893799, 10893856)] 2021-10-25 09:37:37.419 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:37.419 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:37.506 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017418: ['FBtr0089506', 'FBtr0089507', 'FBtr0089508', 'FBtr0306057', 'FBtr0332850', 'FBtr0332851'] 2021-10-25 09:37:37.682 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18132877, 18132959), (18133186, 18133247), (18133371, 18133710), (18134360, 18135068), (18135125, 18135186), (18135339, 18136441), (18137046, 18137575), (18137050, 18137364), (18137050, 18137575), (18137050, 18137420)] 2021-10-25 09:37:37.685 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:37.685 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:37.973 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017424: ['FBtr0347179'] 2021-10-25 09:37:37.973 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017424 has a single transcript. 2021-10-25 09:37:37.984 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017429: ['FBtr0076649', 'FBtr0330166', 'FBtr0333114'] 2021-10-25 09:37:38.078 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8602853, 8602914), (8603203, 8603264), (8603822, 8603905), (8603849, 8603905), (8603855, 8603905)] 2021-10-25 09:37:38.079 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:38.079 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:38.215 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017430: ['FBtr0076650'] 2021-10-25 09:37:38.216 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017430 has a single transcript. 2021-10-25 09:37:38.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017448: ['FBtr0085861', 'FBtr0303376'] 2021-10-25 09:37:38.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31755791, 31755853), (31756386, 31756444), (31756553, 31756640), (31756781, 31756834), (31757054, 31757110), (31757228, 31757308), (31757468, 31757774)] 2021-10-25 09:37:38.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:38.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:38.359 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017456: ['FBtr0081552'] 2021-10-25 09:37:38.360 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017456 has a single transcript. 2021-10-25 09:37:38.371 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017457: ['FBtr0078133', 'FBtr0333408'] 2021-10-25 09:37:38.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(294372, 294440)] 2021-10-25 09:37:38.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:38.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:38.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017482: ['FBtr0071848'] 2021-10-25 09:37:38.509 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017482 has a single transcript. 2021-10-25 09:37:38.519 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017545: ['FBtr0089175', 'FBtr0089176', 'FBtr0308296'] 2021-10-25 09:37:38.607 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(65521, 65999), (66049, 66104), (66738, 66839), (66991, 67047)] 2021-10-25 09:37:38.609 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (66839, 67207, 'FBtr0089175_exon_1') contains intron (66991, 67047) 2021-10-25 09:37:38.609 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (66839, 67207, 'FBtr0308296_exon_1') contains intron (66991, 67047) 2021-10-25 09:37:38.610 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0089175_exon_1', 'FBtr0308296_exon_1'] 2021-10-25 09:37:38.610 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:38.749 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017550: ['FBtr0078741', 'FBtr0078742', 'FBtr0345140'] 2021-10-25 09:37:38.838 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5607592, 5607683), (5607848, 5607952), (5608157, 5608449), (5609019, 5609631), (5609019, 5609649), (5609881, 5610214), (5610429, 5610487), (5610623, 5612069)] 2021-10-25 09:37:38.840 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:38.841 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:38.966 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017551: ['FBtr0079342'] 2021-10-25 09:37:38.967 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017551 has a single transcript. 2021-10-25 09:37:38.978 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017556: ['FBtr0072350', 'FBtr0343481'] 2021-10-25 09:37:39.042 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24501611, 24501791), (24502021, 24502085)] 2021-10-25 09:37:39.044 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:39.044 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:39.133 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017558: ['FBtr0088508', 'FBtr0112892', 'FBtr0333004', 'FBtr0306807'] 2021-10-25 09:37:39.246 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9427373, 9431970), (9432178, 9432234), (9432425, 9432489), (9433064, 9433129), (9433228, 9434206), (9433228, 9434353)] 2021-10-25 09:37:39.247 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:39.248 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:39.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017561: ['FBtr0073404', 'FBtr0073405', 'FBtr0346304', 'FBtr0343584'] 2021-10-25 09:37:39.560 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10880557, 10880871), (10880576, 10881474), (10880944, 10881474), (10881622, 10881739), (10881843, 10881914), (10882166, 10882232), (10882531, 10885993), (10886157, 10890640), (10886157, 10890331)] 2021-10-25 09:37:39.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:39.563 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:39.752 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017566: ['FBtr0071180', 'FBtr0071181'] 2021-10-25 09:37:39.806 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8249094, 8249153), (8249642, 8249702), (8250729, 8250797), (8251129, 8251200), (8251388, 8251596)] 2021-10-25 09:37:39.807 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:39.808 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:39.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017567: ['FBtr0083191'] 2021-10-25 09:37:39.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017567 has a single transcript. 2021-10-25 09:37:39.895 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017572: ['FBtr0075358', 'FBtr0331560'] 2021-10-25 09:37:39.951 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:39.952 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:39.952 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017577: ['FBtr0082279'] 2021-10-25 09:37:40.018 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017577 has a single transcript. 2021-10-25 09:37:40.029 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017578: ['FBtr0075018', 'FBtr0310276', 'FBtr0345391'] 2021-10-25 09:37:40.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19263018, 19263083), (19263207, 19263416), (19263524, 19263839), (19263905, 19263980)] 2021-10-25 09:37:40.122 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:40.122 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.253 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017579: ['FBtr0076633'] 2021-10-25 09:37:40.253 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017579 has a single transcript. 2021-10-25 09:37:40.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017581: ['FBtr0082534', 'FBtr0082535'] 2021-10-25 09:37:40.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11755111, 11755176), (11755387, 11755448), (11755671, 11755734), (11756246, 11756312), (11756492, 11763483), (11756492, 11759553)] 2021-10-25 09:37:40.318 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:40.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.393 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0017590: ['FBtr0084337'] 2021-10-25 09:37:40.393 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0017590 has a single transcript. 2021-10-25 09:37:40.404 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019624: ['FBtr0082473', 'FBtr0082474', 'FBtr0347553', 'FBtr0334890'] 2021-10-25 09:37:40.514 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11819402, 11819547), (11819644, 11819706), (11819644, 11819710)] 2021-10-25 09:37:40.515 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11819598, 11820299, 'FBtr0082474_exon_1') contains intron (11819644, 11819706) 2021-10-25 09:37:40.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082474_exon_1'] 2021-10-25 09:37:40.516 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019637: ['FBtr0078704'] 2021-10-25 09:37:40.675 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019637 has a single transcript. 2021-10-25 09:37:40.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019643: ['FBtr0072254', 'FBtr0072255'] 2021-10-25 09:37:40.754 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24139861, 24155803), (24147123, 24154631), (24155042, 24155803), (24155977, 24156896), (24157049, 24157113)] 2021-10-25 09:37:40.756 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:40.756 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019644: ['FBtr0076405'] 2021-10-25 09:37:40.835 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019644 has a single transcript. 2021-10-25 09:37:40.847 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019650: ['FBtr0089185', 'FBtr0339509'] 2021-10-25 09:37:40.899 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(990502, 992065), (992246, 996511), (996749, 997706), (997883, 998622), (998693, 1004157), (998705, 1004157), (1004373, 1004469), (1004412, 1004469), (1004618, 1005806), (1006009, 1006065)] 2021-10-25 09:37:40.900 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:40.901 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:40.983 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019660: ['FBtr0073514', 'FBtr0073515', 'FBtr0343985', 'FBtr0343986', 'FBtr0308845', 'FBtr0308846'] 2021-10-25 09:37:41.147 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11579124, 11579214), (11579124, 11579348), (11579124, 11579351), (11579124, 11579669), (11579124, 11579385), (11579236, 11579348), (11579399, 11579511), (11579399, 11579452), (11579528, 11579669)] 2021-10-25 09:37:41.148 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11579064, 11580432, 'FBtr0073515_exon_1') contains intron (11579124, 11579214) 2021-10-25 09:37:41.149 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11579351, 11579528, 'FBtr0343986_exon_2') contains intron (11579399, 11579511) 2021-10-25 09:37:41.150 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11579348, 11579528, 'FBtr0308845_exon_3') contains intron (11579399, 11579511) 2021-10-25 09:37:41.150 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0073515_exon_1', 'FBtr0343986_exon_2', 'FBtr0308845_exon_3'] 2021-10-25 09:37:41.150 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:41.431 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019661: ['FBtr0070634', 'FBtr0070635', 'FBtr0337066', 'FBtr0337067', 'FBtr0345714'] 2021-10-25 09:37:41.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3861950, 3862020)] 2021-10-25 09:37:41.573 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3858939, 3862697, 'FBtr0070634_exon_1') contains intron (3861950, 3862020) 2021-10-25 09:37:41.573 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3858276, 3862697, 'FBtr0337066_exon_1') contains intron (3861950, 3862020) 2021-10-25 09:37:41.574 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3858276, 3862061, 'FBtr0337067_exon_1') contains intron (3861950, 3862020) 2021-10-25 09:37:41.574 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3857229, 3862061, 'FBtr0345714_exon_1') contains intron (3861950, 3862020) 2021-10-25 09:37:41.575 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070634_exon_1', 'FBtr0337066_exon_1', 'FBtr0337067_exon_1', 'FBtr0345714_exon_1'] 2021-10-25 09:37:41.575 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:41.813 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019662: ['FBtr0076846', 'FBtr0302045', 'FBtr0332729'] 2021-10-25 09:37:41.896 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7348675, 7348862), (7349017, 7351268), (7349017, 7351304), (7351413, 7351466), (7351727, 7351794), (7351897, 7351970), (7352098, 7352234), (7352733, 7353342)] 2021-10-25 09:37:41.897 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7352234, 7353622, 'FBtr0302045_exon_7') contains intron (7352733, 7353342) 2021-10-25 09:37:41.898 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7352234, 7353622, 'FBtr0332729_exon_7') contains intron (7352733, 7353342) 2021-10-25 09:37:41.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302045_exon_7', 'FBtr0332729_exon_7'] 2021-10-25 09:37:41.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:42.040 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019686: ['FBtr0081328', 'FBtr0081329', 'FBtr0081330', 'FBtr0306234'] 2021-10-25 09:37:42.137 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20061720, 20061781), (20062012, 20062147), (20062063, 20062147), (20062305, 20062544), (20062653, 20062733), (20063171, 20063377), (20063318, 20063377), (20063612, 20063671)] 2021-10-25 09:37:42.139 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20061496, 20062012, 'FBtr0081330_exon_1') contains intron (20061720, 20061781) 2021-10-25 09:37:42.139 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20061496, 20062012, 'FBtr0306234_exon_1') contains intron (20061720, 20061781) 2021-10-25 09:37:42.140 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081330_exon_1', 'FBtr0306234_exon_1'] 2021-10-25 09:37:42.140 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:42.328 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019809: ['FBtr0079837'] 2021-10-25 09:37:42.329 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019809 has a single transcript. 2021-10-25 09:37:42.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019828: ['FBtr0089742', 'FBtr0089741', 'FBtr0305962'] 2021-10-25 09:37:42.424 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7059491, 7059569), (7059491, 7059549)] 2021-10-25 09:37:42.425 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (7059315, 7060524, 'FBtr0305962_exon_1') contains intron (7059491, 7059569) 2021-10-25 09:37:42.425 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305962_exon_1'] 2021-10-25 09:37:42.426 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:42.540 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019830: ['FBtr0077731', 'FBtr0077734'] 2021-10-25 09:37:42.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:42.589 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:42.590 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:42.674 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019890: ['FBtr0080561', 'FBtr0080562', 'FBtr0343669'] 2021-10-25 09:37:42.751 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13900063, 13900142), (13900301, 13900631), (13901981, 13902074), (13903717, 13903780), (13903931, 13904206), (13903931, 13904397), (13903931, 13904104)] 2021-10-25 09:37:42.752 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:42.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:42.873 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019925: ['FBtr0083117'] 2021-10-25 09:37:42.874 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019925 has a single transcript. 2021-10-25 09:37:42.882 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019928: ['FBtr0087664'] 2021-10-25 09:37:42.882 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019928 has a single transcript. 2021-10-25 09:37:42.890 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019929: ['FBtr0071387'] 2021-10-25 09:37:42.890 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019929 has a single transcript. 2021-10-25 09:37:42.898 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019932: ['FBtr0079994'] 2021-10-25 09:37:42.899 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019932 has a single transcript. 2021-10-25 09:37:42.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019936: ['FBtr0083964'] 2021-10-25 09:37:42.906 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019936 has a single transcript. 2021-10-25 09:37:42.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019938: ['FBtr0087511'] 2021-10-25 09:37:42.913 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019938 has a single transcript. 2021-10-25 09:37:42.920 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019940: ['FBtr0347603'] 2021-10-25 09:37:42.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019940 has a single transcript. 2021-10-25 09:37:42.927 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019949: ['FBtr0071937'] 2021-10-25 09:37:42.927 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019949 has a single transcript. 2021-10-25 09:37:42.934 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019952: ['FBtr0084599', 'FBtr0334870'] 2021-10-25 09:37:42.983 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:42.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:42.985 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:43.065 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019957: ['FBtr0084172', 'FBtr0084173', 'FBtr0335194'] 2021-10-25 09:37:43.146 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22027780, 22028019), (22027824, 22028019), (22029148, 22029215)] 2021-10-25 09:37:43.147 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22027708, 22029148, 'FBtr0084173_exon_1') contains intron (22027780, 22028019) 2021-10-25 09:37:43.148 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084173_exon_1'] 2021-10-25 09:37:43.148 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:43.276 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019960: ['FBtr0290271', 'FBtr0335199', 'FBtr0335200'] 2021-10-25 09:37:43.356 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22020037, 22020103), (22020392, 22020449), (22020608, 22020824), (22020608, 22020701), (22020722, 22020824), (22021520, 22021583), (22021732, 22021792), (22022266, 22022399), (22022629, 22022886)] 2021-10-25 09:37:43.358 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:43.358 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:43.483 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019968: ['FBtr0087357', 'FBtr0329955', 'FBtr0329956', 'FBtr0329957', 'FBtr0346265'] 2021-10-25 09:37:43.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15518831, 15518893), (15519205, 15519275), (15519869, 15519925), (15520336, 15521841), (15520336, 15520416), (15520479, 15521841), (15521940, 15522001), (15521943, 15522001), (15522104, 15522873), (15522128, 15522873), (15522128, 15522435), (15522465, 15522873), (15523019, 15523074), (15524737, 15525014), (15524737, 15524859), (15524901, 15525014), (15525329, 15525389), (15525962, 15526018), (15526595, 15526715), (15527232, 15527298), (15527462, 15527629), (15527717, 15532121), (15527717, 15531134), (15531395, 15532121)] 2021-10-25 09:37:43.623 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:43.623 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:43.650 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0329955': ['FBtr0329957']} 2021-10-25 09:37:43.650 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0329957']] 2021-10-25 09:37:43.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019972: ['FBtr0085482'] 2021-10-25 09:37:43.825 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0019972 has a single transcript. 2021-10-25 09:37:43.835 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019982: ['FBtr0077453', 'FBtr0110812'] 2021-10-25 09:37:43.897 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4455738, 4455856), (4455738, 4456113), (4456075, 4456385), (4456332, 4456385), (4456520, 4456725), (4456520, 4456723)] 2021-10-25 09:37:43.898 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:43.899 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:43.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019985: ['FBtr0089184', 'FBtr0344897', 'FBtr0332858', 'FBtr0332859'] 2021-10-25 09:37:44.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(936929, 938331), (939117, 940173), (939117, 942766), (940717, 942766), (943020, 943102), (943209, 943547), (943673, 943733), (944253, 944305), (944601, 946224)] 2021-10-25 09:37:44.088 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (943102, 943673, 'FBtr0332859_exon_5') contains intron (943209, 943547) 2021-10-25 09:37:44.088 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (943733, 944486, 'FBtr0332859_exon_6') contains intron (944253, 944305) 2021-10-25 09:37:44.089 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0332859_exon_5', 'FBtr0332859_exon_6'] 2021-10-25 09:37:44.089 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:44.268 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0019990: ['FBtr0085787', 'FBtr0334551', 'FBtr0334552'] 2021-10-25 09:37:44.355 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31396056, 31396122), (31396292, 31396401), (31396907, 31396985), (31396913, 31396985), (31397613, 31397666), (31398239, 31398304), (31398481, 31398545), (31399044, 31399102), (31400155, 31400217), (31401188, 31401250)] 2021-10-25 09:37:44.357 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:44.357 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:44.496 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020018: ['FBtr0084664'] 2021-10-25 09:37:44.496 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020018 has a single transcript. 2021-10-25 09:37:44.508 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020224: ['FBtr0076614', 'FBtr0076615'] 2021-10-25 09:37:44.561 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8425862, 8426405), (8426813, 8426901), (8427026, 8427091), (8427213, 8427271), (8427403, 8429040)] 2021-10-25 09:37:44.562 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:44.562 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:44.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020235: ['FBtr0085539', 'FBtr0085540', 'FBtr0085541'] 2021-10-25 09:37:44.717 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(29748748, 29748823), (29748769, 29748823)] 2021-10-25 09:37:44.718 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (29747703, 29748869, 'FBtr0085541_exon_1') contains intron (29748748, 29748823) 2021-10-25 09:37:44.719 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0085541_exon_1'] 2021-10-25 09:37:44.719 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:44.853 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020236: ['FBtr0340016', 'FBtr0300596', 'FBtr0300597', 'FBtr0300598'] 2021-10-25 09:37:44.956 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15994396, 15994461), (15994802, 15994864), (15996098, 15996166), (15996314, 15996894), (15996317, 15996894), (15996365, 15996894), (15997218, 15997276), (15998003, 15998066), (15998252, 15999804), (15999970, 16000094), (15999970, 16001187)] 2021-10-25 09:37:44.958 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:44.959 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:45.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020238: ['FBtr0083565', 'FBtr0083566', 'FBtr0083567', 'FBtr0083568'] 2021-10-25 09:37:45.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18242909, 18247432), (18247902, 18247970), (18248151, 18248214), (18248151, 18248220), (18248151, 18248217), (18248151, 18248232)] 2021-10-25 09:37:45.270 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:45.270 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:45.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020248: ['FBtr0072712', 'FBtr0072713'] 2021-10-25 09:37:45.495 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1476522, 1476581), (1476993, 1477056), (1477287, 1478771), (1477287, 1487758), (1487935, 1488005), (1488029, 1488097), (1488190, 1488245), (1488507, 1489451)] 2021-10-25 09:37:45.496 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:45.496 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:45.581 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020249: ['FBtr0081844', 'FBtr0081845', 'FBtr0081846', 'FBtr0306260'] 2021-10-25 09:37:45.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8357095, 8357336), (8357095, 8358470), (8357456, 8358470), (8358404, 8358470), (8358590, 8358648), (8358954, 8359008), (8359150, 8359206), (8359465, 8359529)] 2021-10-25 09:37:45.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:45.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:45.859 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020251: ['FBtr0076968', 'FBtr0301562'] 2021-10-25 09:37:45.908 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6496481, 6523029), (6496481, 6505082), (6505119, 6523029), (6524096, 6534492), (6534702, 6544467), (6546352, 6547248), (6547601, 6548686)] 2021-10-25 09:37:45.910 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:45.910 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:45.990 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020255: ['FBtr0073471', 'FBtr0073472', 'FBtr0340164', 'FBtr0340165'] 2021-10-25 09:37:46.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11145864, 11145942), (11146415, 11148485), (11146428, 11148485)] 2021-10-25 09:37:46.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020257: ['FBtr0071924', 'FBtr0330249', 'FBtr0343014'] 2021-10-25 09:37:46.373 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:46.375 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.375 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.392 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0071924': ['FBtr0330249']} 2021-10-25 09:37:46.392 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330249']] 2021-10-25 09:37:46.447 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020258: ['FBtr0080638'] 2021-10-25 09:37:46.447 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020258 has a single transcript. 2021-10-25 09:37:46.457 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020261: ['FBtr0074784', 'FBtr0302082'] 2021-10-25 09:37:46.513 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19486192, 19486260), (19486338, 19486404), (19486341, 19486404), (19487067, 19487131), (19487712, 19487791), (19488685, 19488738), (19489058, 19489141), (19489410, 19489484), (19489949, 19490206), (19490515, 19490584), (19491679, 19491738)] 2021-10-25 09:37:46.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.592 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020269: ['FBtr0087477', 'FBtr0345427'] 2021-10-25 09:37:46.643 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14672385, 14672653), (14673076, 14679942), (14680172, 14683548), (14683770, 14684152), (14684607, 14712811)] 2021-10-25 09:37:46.644 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.644 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.725 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020270: ['FBtr0080213'] 2021-10-25 09:37:46.725 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020270 has a single transcript. 2021-10-25 09:37:46.736 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020272: ['FBtr0077211', 'FBtr0346380'] 2021-10-25 09:37:46.787 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21389092, 21389147), (21389877, 21389936)] 2021-10-25 09:37:46.788 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.788 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.863 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020277: ['FBtr0074969', 'FBtr0301489'] 2021-10-25 09:37:46.916 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19604763, 19604823), (19604974, 19605029), (19605446, 19606061), (19605446, 19605955)] 2021-10-25 09:37:46.918 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:46.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:46.999 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020278: ['FBtr0084273', 'FBtr0084275', 'FBtr0084276', 'FBtr0309249', 'FBtr0304669'] 2021-10-25 09:37:47.142 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22620855, 22620922), (22622063, 22622123), (22622906, 22626313), (22622906, 22635644), (22622906, 22629552), (22622906, 22626286), (22622906, 22636800), (22630606, 22632891), (22638947, 22639016)] 2021-10-25 09:37:47.144 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:47.144 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:47.365 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020279: ['FBtr0088776', 'FBtr0100575', 'FBtr0088774', 'FBtr0088775', 'FBtr0301915', 'FBtr0301916', 'FBtr0301917', 'FBtr0304681', 'FBtr0304682', 'FBtr0330630', 'FBtr0330631', 'FBtr0346957'] 2021-10-25 09:37:47.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8068011, 8069746), (8068011, 8069870), (8068080, 8069870), (8068366, 8069870), (8068834, 8069870), (8069812, 8069870), (8070279, 8070334), (8070512, 8070820), (8072238, 8072362), (8072778, 8073599), (8072778, 8073126), (8073234, 8073366), (8073471, 8073599), (8073700, 8073973), (8074404, 8075472), (8074500, 8075472), (8074500, 8075411), (8075607, 8075664), (8075790, 8075859), (8076102, 8076292), (8076108, 8076292), (8076448, 8077730), (8076448, 8077259), (8077292, 8077730)] 2021-10-25 09:37:47.734 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:47.735 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:47.777 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330631': ['FBtr0346957']} 2021-10-25 09:37:47.778 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0346957']] 2021-10-25 09:37:48.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020280: ['FBtr0078852', 'FBtr0345252'] 2021-10-25 09:37:48.340 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4876731, 4876802), (4876731, 4876808), (4878425, 4878476)] 2021-10-25 09:37:48.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:48.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:48.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020294: ['FBtr0078324', 'FBtr0333449'] 2021-10-25 09:37:48.475 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21078122, 21078196), (21078348, 21078407), (21078635, 21078707), (21078952, 21079047), (21079306, 21089038), (21089234, 21099460), (21100193, 21130804)] 2021-10-25 09:37:48.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:48.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:48.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020299: ['FBtr0082959', 'FBtr0112893', 'FBtr0334955', 'FBtr0334956', 'FBtr0334957'] 2021-10-25 09:37:48.705 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14577492, 14583050), (14583246, 14592281), (14592009, 14592281), (14592520, 14592660), (14592842, 14593003), (14592842, 14593006), (14593215, 14604417), (14597010, 14604417), (14602309, 14604417), (14603551, 14604417), (14604604, 14604692)] 2021-10-25 09:37:48.707 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:48.707 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:48.950 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020300: ['FBtr0075126'] 2021-10-25 09:37:48.950 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020300 has a single transcript. 2021-10-25 09:37:48.963 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020304: ['FBtr0078037', 'FBtr0302612', 'FBtr0302120', 'FBtr0302121', 'FBtr0334763'] 2021-10-25 09:37:49.098 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(834583, 834973), (835290, 835352), (835547, 836545), (835547, 835703), (836171, 836545), (837378, 842613), (837378, 849898)] 2021-10-25 09:37:49.100 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:49.101 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:49.332 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020305: ['FBtr0078030'] 2021-10-25 09:37:49.333 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020305 has a single transcript. 2021-10-25 09:37:49.348 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020306: ['FBtr0071602', 'FBtr0071603', 'FBtr0071604', 'FBtr0342890'] 2021-10-25 09:37:49.472 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21323622, 21324188), (21324810, 21324869), (21325173, 21325391), (21325647, 21326189), (21325647, 21327418), (21326294, 21327418), (21328219, 21328439), (21329661, 21329902), (21330089, 21331119), (21331256, 21331333), (21331520, 21331749), (21333846, 21334373), (21334592, 21337427), (21337463, 21337524), (21340620, 21340683), (21341076, 21341419)] 2021-10-25 09:37:49.474 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21340683, 21341847, 'FBtr0071603_exon_14') contains intron (21341076, 21341419) 2021-10-25 09:37:49.475 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21340683, 21341847, 'FBtr0342890_exon_15') contains intron (21341076, 21341419) 2021-10-25 09:37:49.475 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071603_exon_14', 'FBtr0342890_exon_15'] 2021-10-25 09:37:49.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:49.670 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020307: ['FBtr0071775', 'FBtr0071776'] 2021-10-25 09:37:49.722 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22244747, 22262764), (22263443, 22280666), (22270947, 22280666), (22280876, 22280989), (22281219, 22283347), (22285077, 22285200)] 2021-10-25 09:37:49.723 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:49.723 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:49.804 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020309: ['FBtr0080262', 'FBtr0080263', 'FBtr0080260', 'FBtr0080261', 'FBtr0305262', 'FBtr0335473', 'FBtr0335474', 'FBtr0335475', 'FBtr0335476'] 2021-10-25 09:37:50.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11797741, 11798664), (11797741, 11797828), (11798041, 11798664), (11799150, 11799234), (11799402, 11802370), (11799402, 11802286), (11799402, 11800154), (11799405, 11800154), (11800322, 11802904), (11800322, 11802370), (11800322, 11802286), (11803674, 11803784), (11803898, 11809125), (11803898, 11806047), (11803898, 11808013), (11806157, 11808013), (11806157, 11809125)] 2021-10-25 09:37:50.068 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0080262_exon_6') contains intron (11799150, 11799234) 2021-10-25 09:37:50.068 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0080263_exon_6') contains intron (11799150, 11799234) 2021-10-25 09:37:50.069 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0080261_exon_6') contains intron (11799150, 11799234) 2021-10-25 09:37:50.070 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0305262_exon_5') contains intron (11799150, 11799234) 2021-10-25 09:37:50.071 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0335474_exon_4') contains intron (11799150, 11799234) 2021-10-25 09:37:50.072 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799405, 'FBtr0335475_exon_6') contains intron (11799150, 11799234) 2021-10-25 09:37:50.072 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11798664, 11799402, 'FBtr0335476_exon_6') contains intron (11799150, 11799234) 2021-10-25 09:37:50.073 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080262_exon_6', 'FBtr0080263_exon_6', 'FBtr0080261_exon_6', 'FBtr0305262_exon_5', 'FBtr0335474_exon_4', 'FBtr0335475_exon_6', 'FBtr0335476_exon_6'] 2021-10-25 09:37:50.073 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:50.516 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020312: ['FBtr0071637', 'FBtr0071638'] 2021-10-25 09:37:50.571 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21125002, 21125062), (21125844, 21125905), (21127133, 21128401), (21127133, 21127401)] 2021-10-25 09:37:50.572 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:50.572 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:50.651 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020369: ['FBtr0077189'] 2021-10-25 09:37:50.651 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020369 has a single transcript. 2021-10-25 09:37:50.667 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020370: ['FBtr0087774', 'FBtr0087775', 'FBtr0344199', 'FBtr0339755'] 2021-10-25 09:37:50.774 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13153366, 13153424), (13153752, 13153813), (13154809, 13154869), (13154981, 13155046), (13155210, 13155268), (13155474, 13155536), (13155693, 13155747), (13155869, 13156075), (13156630, 13156886), (13156630, 13156767), (13156830, 13156886), (13157436, 13157495), (13157832, 13158019), (13158276, 13158766), (13158312, 13158372)] 2021-10-25 09:37:50.777 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:50.777 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:50.958 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020371: ['FBtr0089699', 'FBtr0343734'] 2021-10-25 09:37:51.009 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:37:51.011 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:51.011 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:51.097 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020372: ['FBtr0072130', 'FBtr0100255', 'FBtr0330600'] 2021-10-25 09:37:51.175 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23878958, 23879623), (23879812, 23879874), (23880060, 23880153), (23880354, 23880430)] 2021-10-25 09:37:51.177 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23878506, 23879812, 'FBtr0100255_exon_1') contains intron (23878958, 23879623) 2021-10-25 09:37:51.177 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100255_exon_1'] 2021-10-25 09:37:51.177 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:51.298 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020376: ['FBtr0077466'] 2021-10-25 09:37:51.299 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020376 has a single transcript. 2021-10-25 09:37:51.309 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020377: ['FBtr0088004', 'FBtr0303037'] 2021-10-25 09:37:51.363 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12209391, 12209462), (12210148, 12210259), (12210797, 12210923), (12211289, 12211875)] 2021-10-25 09:37:51.364 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:51.364 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:51.435 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020378: ['FBtr0071381', 'FBtr0273354', 'FBtr0310290', 'FBtr0331335'] 2021-10-25 09:37:51.550 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9729870, 9730299), (9729883, 9730299), (9730677, 9753000), (9753320, 9753540), (9753320, 9753555)] 2021-10-25 09:37:51.551 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9753000, 9755798, 'FBtr0071381_exon_3') contains intron (9753320, 9753540) 2021-10-25 09:37:51.551 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9729647, 9730677, 'FBtr0273354_exon_1') contains intron (9729870, 9730299) 2021-10-25 09:37:51.552 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9729647, 9730677, 'FBtr0331335_exon_1') contains intron (9729870, 9730299) 2021-10-25 09:37:51.552 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071381_exon_3', 'FBtr0273354_exon_1', 'FBtr0331335_exon_1'] 2021-10-25 09:37:51.553 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:51.573 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0273354': ['FBtr0331335']} 2021-10-25 09:37:51.574 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0331335']] 2021-10-25 09:37:51.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020379: ['FBtr0305995', 'FBtr0337103', 'FBtr0337104', 'FBtr0337105', 'FBtr0337106', 'FBtr0337107'] 2021-10-25 09:37:51.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10363297, 10363366), (10363735, 10363945), (10364260, 10364478), (10364781, 10364966), (10365425, 10365504), (10365669, 10365735), (10365973, 10366048), (10366127, 10366682), (10366127, 10372148), (10372509, 10372740), (10372533, 10372740), (10373205, 10377690)] 2021-10-25 09:37:51.882 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10365504, 10365973, 'FBtr0305995_exon_5') contains intron (10365669, 10365735) 2021-10-25 09:37:51.883 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10365504, 10365973, 'FBtr0337103_exon_3') contains intron (10365669, 10365735) 2021-10-25 09:37:51.884 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10365504, 10365973, 'FBtr0337105_exon_5') contains intron (10365669, 10365735) 2021-10-25 09:37:51.885 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305995_exon_5', 'FBtr0337103_exon_3', 'FBtr0337105_exon_5'] 2021-10-25 09:37:51.885 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:52.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020381: ['FBtr0114559', 'FBtr0114560', 'FBtr0114561', 'FBtr0340083'] 2021-10-25 09:37:52.294 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(633838, 633901), (634056, 634124), (634487, 634563), (634487, 634545), (635289, 635393), (635308, 635393)] 2021-10-25 09:37:52.295 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (634124, 635289, 'FBtr0114561_exon_2') contains intron (634487, 634563) 2021-10-25 09:37:52.296 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0114561_exon_2'] 2021-10-25 09:37:52.296 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:52.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020385: ['FBtr0082264', 'FBtr0082265', 'FBtr0082266', 'FBtr0100144', 'FBtr0305662'] 2021-10-25 09:37:52.596 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10696802, 10699750), (10697268, 10699750), (10699699, 10699750), (10699822, 10699884), (10700095, 10700218), (10700690, 10701001), (10702839, 10702905)] 2021-10-25 09:37:52.598 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (10699656, 10699822, 'FBtr0082265_exon_1') contains intron (10699699, 10699750) 2021-10-25 09:37:52.599 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0082265_exon_1'] 2021-10-25 09:37:52.599 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:52.839 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020386: ['FBtr0072468', 'FBtr0072469', 'FBtr0072470', 'FBtr0072471', 'FBtr0072464', 'FBtr0072465', 'FBtr0072466', 'FBtr0072467', 'FBtr0333218'] 2021-10-25 09:37:53.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(129888, 135457), (131913, 135057), (132055, 135457), (132530, 135457), (132809, 135457), (135384, 135457), (135842, 135966), (136335, 141769), (141440, 141769), (141440, 141563), (141691, 141769), (142879, 142942), (143217, 143514)] 2021-10-25 09:37:53.104 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:53.104 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:53.551 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020388: ['FBtr0075969'] 2021-10-25 09:37:53.552 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020388 has a single transcript. 2021-10-25 09:37:53.566 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020389: ['FBtr0074886', 'FBtr0074887', 'FBtr0074888', 'FBtr0074889', 'FBtr0074885', 'FBtr0111108', 'FBtr0332146', 'FBtr0332147'] 2021-10-25 09:37:53.796 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19845428, 19845511), (19845428, 19845496), (19845428, 19845534), (19845630, 19848169), (19845630, 19858377), (19847603, 19848169), (19847603, 19858377), (19848398, 19858377), (19858492, 19858814), (19860340, 19860404)] 2021-10-25 09:37:53.797 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19845292, 19845630, 'FBtr0074886_exon_1') contains intron (19845428, 19845511) 2021-10-25 09:37:53.799 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19845292, 19845630, 'FBtr0111108_exon_1') contains intron (19845428, 19845511) 2021-10-25 09:37:53.800 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0074886_exon_1', 'FBtr0111108_exon_1'] 2021-10-25 09:37:53.800 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:54.179 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020391: ['FBtr0087728'] 2021-10-25 09:37:54.180 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020391 has a single transcript. 2021-10-25 09:37:54.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020392: ['FBtr0076728'] 2021-10-25 09:37:54.189 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020392 has a single transcript. 2021-10-25 09:37:54.196 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020399: ['FBtr0083260'] 2021-10-25 09:37:54.196 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020399 has a single transcript. 2021-10-25 09:37:54.203 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020407: ['FBtr0083259'] 2021-10-25 09:37:54.203 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020407 has a single transcript. 2021-10-25 09:37:54.211 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020412: ['FBtr0076236', 'FBtr0076237', 'FBtr0332707'] 2021-10-25 09:37:54.295 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11079762, 11080426), (11081955, 11082015), (11082464, 11082525), (11083337, 11083400), (11083485, 11085428), (11085562, 11085639), (11085708, 11090897), (11091772, 11092271)] 2021-10-25 09:37:54.297 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11078751, 11081955, 'FBtr0076237_exon_7') contains intron (11079762, 11080426) 2021-10-25 09:37:54.297 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11078751, 11081955, 'FBtr0332707_exon_8') contains intron (11079762, 11080426) 2021-10-25 09:37:54.298 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076237_exon_7', 'FBtr0332707_exon_8'] 2021-10-25 09:37:54.298 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:54.412 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020414: ['FBtr0080862', 'FBtr0080863', 'FBtr0080864', 'FBtr0342945'] 2021-10-25 09:37:54.512 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16451111, 16451189), (16451307, 16451375), (16451927, 16452193)] 2021-10-25 09:37:54.513 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16451059, 16451307, 'FBtr0080863_exon_1') contains intron (16451111, 16451189) 2021-10-25 09:37:54.514 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16451059, 16451307, 'FBtr0080864_exon_1') contains intron (16451111, 16451189) 2021-10-25 09:37:54.515 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16451059, 16451307, 'FBtr0342945_exon_1') contains intron (16451111, 16451189) 2021-10-25 09:37:54.515 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0080863_exon_1', 'FBtr0080864_exon_1', 'FBtr0342945_exon_1'] 2021-10-25 09:37:54.515 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:54.675 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020415: ['FBtr0080861', 'FBtr0308080', 'FBtr0305984'] 2021-10-25 09:37:54.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16447505, 16448829), (16447505, 16449185), (16449127, 16449185), (16449743, 16449802)] 2021-10-25 09:37:54.759 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16448829, 16449743, 'FBtr0305984_exon_2') contains intron (16449127, 16449185) 2021-10-25 09:37:54.759 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305984_exon_2'] 2021-10-25 09:37:54.760 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:54.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020416: ['FBtr0080860'] 2021-10-25 09:37:54.875 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020416 has a single transcript. 2021-10-25 09:37:54.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020429: ['FBtr0089577'] 2021-10-25 09:37:54.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020429 has a single transcript. 2021-10-25 09:37:54.900 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020440: ['FBtr0086543', 'FBtr0086544', 'FBtr0086542', 'FBtr0301882', 'FBtr0301883', 'FBtr0114605'] 2021-10-25 09:37:55.086 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19431562, 19431626), (19431737, 19431791), (19432240, 19432302), (19432246, 19432302), (19432392, 19432595), (19432392, 19433501), (19433641, 19433702), (19433842, 19433903), (19434108, 19434163), (19434308, 19434369), (19434502, 19434559), (19434692, 19434754), (19435250, 19435313), (19435549, 19435607), (19435717, 19435776), (19436479, 19436547), (19436643, 19437050), (19436643, 19437214), (19436643, 19436857)] 2021-10-25 09:37:55.089 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19436547, 19437259, 'FBtr0086542_exon_1') contains intron (19436643, 19437050) 2021-10-25 09:37:55.090 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19436547, 19437259, 'FBtr0301882_exon_1') contains intron (19436643, 19437050) 2021-10-25 09:37:55.091 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19436547, 19437259, 'FBtr0114605_exon_1') contains intron (19436643, 19437050) 2021-10-25 09:37:55.091 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086542_exon_1', 'FBtr0301882_exon_1', 'FBtr0114605_exon_1'] 2021-10-25 09:37:55.092 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:55.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020443: ['FBtr0080369', 'FBtr0344859', 'FBtr0333089', 'FBtr0333090'] 2021-10-25 09:37:55.499 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12435423, 12437812), (12436978, 12437812), (12437998, 12438071), (12438841, 12438901), (12438988, 12439053), (12439230, 12439295), (12439464, 12439520)] 2021-10-25 09:37:55.501 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:55.501 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:55.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020445: ['FBtr0089979', 'FBtr0339548', 'FBtr0339549'] 2021-10-25 09:37:55.749 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3335852, 3335913), (3336180, 3336241), (3336398, 3336460), (3337099, 3337162), (3337418, 3337482), (3337894, 3338226), (3338436, 3352475), (3353714, 3353838), (3353714, 3354590), (3353714, 3354473)] 2021-10-25 09:37:55.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:55.752 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:55.887 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020493: ['FBtr0083393', 'FBtr0083394', 'FBtr0100160'] 2021-10-25 09:37:55.972 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17054362, 17055051), (17054362, 17055035), (17055174, 17057418), (17058704, 17064715), (17064769, 17064835), (17064961, 17068470), (17068686, 17068749), (17068900, 17068969)] 2021-10-25 09:37:55.974 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:55.974 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:56.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020496: ['FBtr0082700', 'FBtr0082702', 'FBtr0100161', 'FBtr0082701', 'FBtr0082699', 'FBtr0334513', 'FBtr0334514', 'FBtr0334515', 'FBtr0334516', 'FBtr0334517'] 2021-10-25 09:37:56.406 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13011748, 13019341), (13012172, 13019341), (13017400, 13019341), (13018876, 13019341), (13019814, 13019895), (13020201, 13020853), (13021114, 13021175), (13021307, 13021419), (13021316, 13021419), (13021642, 13024823), (13021642, 13025388), (13021642, 13024799), (13025029, 13025388), (13025044, 13025388)] 2021-10-25 09:37:56.410 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:56.410 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:56.906 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020497: ['FBtr0079663', 'FBtr0346708'] 2021-10-25 09:37:56.965 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8403660, 8404004), (8405779, 8405915), (8406286, 8406375), (8406855, 8406923), (8407256, 8407322), (8407688, 8407774)] 2021-10-25 09:37:56.966 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:56.966 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:57.080 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020503: ['FBtr0080976', 'FBtr0080977', 'FBtr0080975', 'FBtr0301440', 'FBtr0301441', 'FBtr0301442', 'FBtr0290262', 'FBtr0290263', 'FBtr0339796', 'FBtr0332451', 'FBtr0332452', 'FBtr0332453', 'FBtr0332454', 'FBtr0332455'] 2021-10-25 09:37:57.494 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17384839, 17385443), (17385495, 17385560), (17385895, 17400395), (17385895, 17394429), (17386393, 17394429), (17389530, 17394429), (17389530, 17394432), (17394492, 17400395), (17394492, 17398596), (17398716, 17398853), (17398895, 17400395), (17400551, 17400611), (17400827, 17400892), (17401058, 17401112), (17401290, 17404060), (17401290, 17401515), (17401290, 17401518), (17401290, 17402374), (17401581, 17404060), (17401581, 17402374), (17401581, 17404729), (17402485, 17404060), (17402485, 17404729), (17404840, 17405355), (17405422, 17405484), (17406941, 17406995), (17408825, 17408892), (17409023, 17409090), (17409299, 17409358)] 2021-10-25 09:37:57.498 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17384699, 17385495, 'FBtr0301442_exon_1') contains intron (17384839, 17385443) 2021-10-25 09:37:57.500 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17401112, 17402059, 'FBtr0332452_exon_8') contains intron (17401290, 17401515) 2021-10-25 09:37:57.502 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301442_exon_1', 'FBtr0332452_exon_8'] 2021-10-25 09:37:57.502 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:58.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020506: ['FBtr0087117'] 2021-10-25 09:37:58.212 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020506 has a single transcript. 2021-10-25 09:37:58.220 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020508: ['FBtr0073938'] 2021-10-25 09:37:58.220 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020508 has a single transcript. 2021-10-25 09:37:58.227 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020509: ['FBtr0072943'] 2021-10-25 09:37:58.227 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020509 has a single transcript. 2021-10-25 09:37:58.239 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020510: ['FBtr0082910', 'FBtr0307076', 'FBtr0307077', 'FBtr0112896', 'FBtr0337096', 'FBtr0337097'] 2021-10-25 09:37:58.400 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14120228, 14120284), (14120472, 14120694), (14120472, 14120610), (14120622, 14120694), (14120782, 14120846), (14120785, 14120846), (14121469, 14121745), (14122112, 14122362), (14122112, 14122277)] 2021-10-25 09:37:58.404 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:58.405 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:58.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020513: ['FBtr0073705', 'FBtr0333799'] 2021-10-25 09:37:58.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12758854, 12758922), (12759035, 12759462), (12759607, 12759711), (12759912, 12760348), (12759915, 12760348)] 2021-10-25 09:37:58.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:58.742 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:58.819 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020518: ['FBtr0078576'] 2021-10-25 09:37:58.820 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020518 has a single transcript. 2021-10-25 09:37:58.833 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020521: ['FBtr0072312', 'FBtr0072313', 'FBtr0301502', 'FBtr0343486'] 2021-10-25 09:37:58.937 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24581364, 24581840), (24581368, 24581840), (24582078, 24588746), (24587786, 24588746), (24588805, 24589376), (24589425, 24591951), (24592174, 24592232), (24592299, 24592364), (24592299, 24595857), (24596339, 24596395), (24596714, 24596767)] 2021-10-25 09:37:58.939 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24581244, 24582078, 'FBtr0301502_exon_1') contains intron (24581364, 24581840) 2021-10-25 09:37:58.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301502_exon_1'] 2021-10-25 09:37:58.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:59.139 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020545: ['FBtr0078016', 'FBtr0334794'] 2021-10-25 09:37:59.192 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(853005, 853191), (853278, 853544)] 2021-10-25 09:37:59.194 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:59.194 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:59.277 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020546: ['FBtr0083362', 'FBtr0083363', 'FBtr0345273', 'FBtr0345274'] 2021-10-25 09:37:59.392 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16850484, 16850531), (16850484, 16850569), (16851476, 16855810)] 2021-10-25 09:37:59.394 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16850569, 16856497, 'FBtr0345274_exon_2') contains intron (16851476, 16855810) 2021-10-25 09:37:59.394 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0345274_exon_2'] 2021-10-25 09:37:59.394 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:59.561 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020556: ['FBtr0083341', 'FBtr0083342', 'FBtr0083343', 'FBtr0083344'] 2021-10-25 09:37:59.675 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16742791, 16753677), (16744711, 16753677), (16744711, 16745432), (16745609, 16751600), (16753799, 16772854)] 2021-10-25 09:37:59.676 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:59.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:37:59.856 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020616: ['FBtr0079349'] 2021-10-25 09:37:59.856 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020616 has a single transcript. 2021-10-25 09:37:59.868 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020617: ['FBtr0342783'] 2021-10-25 09:37:59.869 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020617 has a single transcript. 2021-10-25 09:37:59.878 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020618: ['FBtr0079565', 'FBtr0345448', 'FBtr0331237', 'FBtr0331238'] 2021-10-25 09:37:59.990 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7826336, 7826769), (7826336, 7826533), (7826981, 7827060)] 2021-10-25 09:37:59.992 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:37:59.992 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:00.182 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020620: ['FBtr0087603', 'FBtr0087604', 'FBtr0087605', 'FBtr0330626', 'FBtr0330627'] 2021-10-25 09:38:00.323 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13985846, 13985989), (13986044, 13988372), (13986095, 13988372), (13987471, 13988372), (13988437, 13988497), (13988883, 13988942), (13989624, 13989684), (13989986, 13990565), (13989986, 13990393)] 2021-10-25 09:38:00.324 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13989684, 13990707, 'FBtr0087604_exon_1') contains intron (13989986, 13990565) 2021-10-25 09:38:00.325 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087604_exon_1'] 2021-10-25 09:38:00.326 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:00.348 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087603': ['FBtr0330627']} 2021-10-25 09:38:00.348 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330627']] 2021-10-25 09:38:00.521 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020621: ['FBtr0088601', 'FBtr0088602', 'FBtr0088603', 'FBtr0088604', 'FBtr0088605', 'FBtr0302603', 'FBtr0302604', 'FBtr0112897', 'FBtr0301511', 'FBtr0308206', 'FBtr0306585', 'FBtr0339290', 'FBtr0339291', 'FBtr0339292', 'FBtr0339293', 'FBtr0433506'] 2021-10-25 09:38:00.995 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9254207, 9254274), (9254415, 9254480), (9254588, 9254650), (9255022, 9255088), (9255443, 9255512), (9255709, 9257409), (9255709, 9255828), (9255709, 9258839), (9256038, 9258839), (9256038, 9256110), (9256038, 9257409), (9257673, 9258839), (9257679, 9258839), (9258060, 9258839), (9260144, 9265489), (9266028, 9267654), (9267976, 9271984), (9267976, 9283827), (9267976, 9268368), (9268778, 9270234), (9272174, 9272299), (9272174, 9274648), (9272707, 9274648), (9284129, 9284958)] 2021-10-25 09:38:00.997 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0088601_exon_6') contains intron (9255443, 9255512) 2021-10-25 09:38:00.998 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0088602_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:00.998 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0088603_exon_6') contains intron (9255443, 9255512) 2021-10-25 09:38:00.999 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0088604_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:00.999 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0088605_exon_3') contains intron (9255443, 9255512) 2021-10-25 09:38:00.999 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0302603_exon_8') contains intron (9255443, 9255512) 2021-10-25 09:38:01.000 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0302604_exon_6') contains intron (9255443, 9255512) 2021-10-25 09:38:01.000 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0112897_exon_6') contains intron (9255443, 9255512) 2021-10-25 09:38:01.001 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0301511_exon_5') contains intron (9255443, 9255512) 2021-10-25 09:38:01.001 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0308206_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:01.001 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0306585_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:01.002 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0339290_exon_8') contains intron (9255443, 9255512) 2021-10-25 09:38:01.003 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0339292_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:01.003 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0339293_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:01.004 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9255088, 9255709, 'FBtr0433506_exon_7') contains intron (9255443, 9255512) 2021-10-25 09:38:01.004 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0088601_exon_6', 'FBtr0088602_exon_7', 'FBtr0088603_exon_6', 'FBtr0088604_exon_7', 'FBtr0088605_exon_3', 'FBtr0302603_exon_8', 'FBtr0302604_exon_6', 'FBtr0112897_exon_6', 'FBtr0301511_exon_5', 'FBtr0308206_exon_7', 'FBtr0306585_exon_7', 'FBtr0339290_exon_8', 'FBtr0339292_exon_7', 'FBtr0339293_exon_7', 'FBtr0433506_exon_7'] 2021-10-25 09:38:01.004 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:01.824 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020622: ['FBtr0331205', 'FBtr0331206', 'FBtr0331207', 'FBtr0331208'] 2021-10-25 09:38:01.944 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(298403, 299032), (299918, 302025), (301944, 302025)] 2021-10-25 09:38:01.945 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (301705, 305233, 'FBtr0331206_exon_1') contains intron (301944, 302025) 2021-10-25 09:38:01.946 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0331206_exon_1'] 2021-10-25 09:38:01.946 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:02.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020626: ['FBtr0084801'] 2021-10-25 09:38:02.105 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020626 has a single transcript. 2021-10-25 09:38:02.115 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020633: ['FBtr0076585'] 2021-10-25 09:38:02.115 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020633 has a single transcript. 2021-10-25 09:38:02.124 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020637: ['FBtr0077059'] 2021-10-25 09:38:02.124 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020637 has a single transcript. 2021-10-25 09:38:02.131 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020638: ['FBtr0077058'] 2021-10-25 09:38:02.131 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020638 has a single transcript. 2021-10-25 09:38:02.138 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020639: ['FBtr0077057'] 2021-10-25 09:38:02.138 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020639 has a single transcript. 2021-10-25 09:38:02.145 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020640: ['FBtr0077056'] 2021-10-25 09:38:02.145 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020640 has a single transcript. 2021-10-25 09:38:02.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020641: ['FBtr0076990', 'FBtr0333581'] 2021-10-25 09:38:02.211 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6143599, 6143690)] 2021-10-25 09:38:02.212 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:02.213 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:02.286 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020642: ['FBtr0076991'] 2021-10-25 09:38:02.287 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020642 has a single transcript. 2021-10-25 09:38:02.297 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020643: ['FBtr0076992'] 2021-10-25 09:38:02.297 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020643 has a single transcript. 2021-10-25 09:38:02.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020644: ['FBtr0076994'] 2021-10-25 09:38:02.305 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020644 has a single transcript. 2021-10-25 09:38:02.314 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020645: ['FBtr0076995'] 2021-10-25 09:38:02.314 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020645 has a single transcript. 2021-10-25 09:38:02.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020646: ['FBtr0076993'] 2021-10-25 09:38:02.321 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020646 has a single transcript. 2021-10-25 09:38:02.333 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020647: ['FBtr0084506', 'FBtr0084507', 'FBtr0084508', 'FBtr0301418', 'FBtr0339250'] 2021-10-25 09:38:02.476 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23998768, 23998829), (23998946, 23999006), (23999562, 23999633), (24000117, 24000179), (24000780, 24003415), (24000780, 24002421), (24002547, 24003415), (24003764, 24005687), (24005995, 24006327), (24005995, 24012982), (24013230, 24013295), (24013628, 24030493), (24031031, 24031711)] 2021-10-25 09:38:02.478 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24030493, 24031827, 'FBtr0084507_exon_1') contains intron (24031031, 24031711) 2021-10-25 09:38:02.479 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (24030493, 24031827, 'FBtr0339250_exon_1') contains intron (24031031, 24031711) 2021-10-25 09:38:02.479 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0084507_exon_1', 'FBtr0339250_exon_1'] 2021-10-25 09:38:02.479 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:02.723 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020653: ['FBtr0071167', 'FBtr0071168', 'FBtr0071169'] 2021-10-25 09:38:02.804 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8242731, 8246093), (8244059, 8246093), (8244497, 8246093), (8246439, 8246509), (8246736, 8246807)] 2021-10-25 09:38:02.806 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:02.806 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:02.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020655: ['FBtr0075981', 'FBtr0332088'] 2021-10-25 09:38:02.973 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12415869, 12415944), (12415869, 12416274), (12416004, 12416274), (12416479, 12416539), (12417087, 12417152)] 2021-10-25 09:38:02.974 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:02.974 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:03.057 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020660: ['FBtr0113679', 'FBtr0113680', 'FBtr0113681', 'FBtr0334940'] 2021-10-25 09:38:03.161 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27842778, 27844504), (27844604, 27847424), (27844604, 27856783), (27847485, 27856783), (27856707, 27856783), (27857935, 27858190)] 2021-10-25 09:38:03.163 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (27856365, 27857935, 'FBtr0113681_exon_2') contains intron (27856707, 27856783) 2021-10-25 09:38:03.163 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0113681_exon_2'] 2021-10-25 09:38:03.164 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:03.331 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020762: ['FBtr0077426', 'FBtr0077427', 'FBtr0112898', 'FBtr0112899'] 2021-10-25 09:38:03.445 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4334104, 4336449), (4334439, 4336449), (4336957, 4341883), (4339117, 4341500), (4341804, 4341883), (4342198, 4342397), (4343695, 4343756), (4343857, 4343919), (4344208, 4344268)] 2021-10-25 09:38:03.447 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:03.447 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:03.627 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020764: ['FBtr0072151'] 2021-10-25 09:38:03.628 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020764 has a single transcript. 2021-10-25 09:38:03.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020765: ['FBtr0077021'] 2021-10-25 09:38:03.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020765 has a single transcript. 2021-10-25 09:38:03.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020767: ['FBtr0087468', 'FBtr0329879', 'FBtr0329880'] 2021-10-25 09:38:03.728 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14762796, 14762918), (14763008, 14763830), (14763074, 14763830), (14763999, 14764059), (14764237, 14768003), (14768370, 14769343), (14768370, 14769277)] 2021-10-25 09:38:03.730 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:03.730 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:03.852 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020880: ['FBtr0301151'] 2021-10-25 09:38:03.852 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020880 has a single transcript. 2021-10-25 09:38:03.864 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020887: ['FBtr0074916', 'FBtr0074917'] 2021-10-25 09:38:03.917 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19919290, 19920153), (19919290, 19919358), (19919520, 19920153), (19920986, 19921051), (19921904, 19921966), (19922456, 19922684), (19922731, 19922798)] 2021-10-25 09:38:03.917 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:03.918 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:03.994 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020906: ['FBtr0100432'] 2021-10-25 09:38:03.995 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020906 has a single transcript. 2021-10-25 09:38:04.006 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020907: ['FBtr0083361'] 2021-10-25 09:38:04.006 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020907 has a single transcript. 2021-10-25 09:38:04.014 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020908: ['FBtr0113713', 'FBtr0334933'] 2021-10-25 09:38:04.074 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2932726, 2932785), (2933284, 2937670), (2937823, 2954996), (2955077, 2963055), (2963222, 2967094), (2967191, 2967983), (2967191, 2967316)] 2021-10-25 09:38:04.075 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:04.076 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:04.152 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020909: ['FBtr0073820'] 2021-10-25 09:38:04.152 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0020909 has a single transcript. 2021-10-25 09:38:04.165 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020910: ['FBtr0082347', 'FBtr0082346', 'FBtr0302586', 'FBtr0336783'] 2021-10-25 09:38:04.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11221932, 11222174), (11222367, 11222560), (11222729, 11223087), (11222729, 11223394), (11223530, 11223857), (11224247, 11224490)] 2021-10-25 09:38:04.284 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:04.285 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:04.476 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020912: ['FBtr0089389', 'FBtr0089391', 'FBtr0330094'] 2021-10-25 09:38:04.556 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(30913584, 30915939), (30916721, 30923417), (30916721, 30923402), (30923558, 30924312), (30924566, 30929134)] 2021-10-25 09:38:04.557 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:04.558 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:04.575 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0089389': ['FBtr0330094']} 2021-10-25 09:38:04.575 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330094']] 2021-10-25 09:38:04.638 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0020930: ['FBtr0087853', 'FBtr0339705'] 2021-10-25 09:38:04.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12757903, 12757961), (12758969, 12759025), (12759343, 12759398)] 2021-10-25 09:38:04.698 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:04.698 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:04.778 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021738: ['FBtr0070599'] 2021-10-25 09:38:04.779 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0021738 has a single transcript. 2021-10-25 09:38:04.789 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021742: ['FBtr0073400'] 2021-10-25 09:38:04.789 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0021742 has a single transcript. 2021-10-25 09:38:04.797 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021750: ['FBtr0083086', 'FBtr0334589'] 2021-10-25 09:38:04.851 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:38:04.852 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:04.852 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:04.929 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021760: ['FBtr0089460', 'FBtr0089461', 'FBtr0089462'] 2021-10-25 09:38:05.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21173045, 21178096), (21176528, 21178096), (21177942, 21178096)] 2021-10-25 09:38:05.017 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:05.017 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:05.136 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021761: ['FBtr0089881', 'FBtr0340224', 'FBtr0340225'] 2021-10-25 09:38:05.233 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11005078, 11005138), (11005301, 11005367), (11005861, 11005920), (11006093, 11006161), (11007132, 11007191), (11007431, 11007494), (11007656, 11007714), (11008261, 11008319), (11008845, 11008910), (11009377, 11009442), (11009565, 11009626), (11009811, 11009878)] 2021-10-25 09:38:05.235 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (11009626, 11010921, 'FBtr0340225_exon_12') contains intron (11009811, 11009878) 2021-10-25 09:38:05.235 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0340225_exon_12'] 2021-10-25 09:38:05.236 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:05.379 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021764: ['FBtr0070133', 'FBtr0070132', 'FBtr0070130', 'FBtr0070131', 'FBtr0340195', 'FBtr0340196', 'FBtr0340197', 'FBtr0302259', 'FBtr0302260'] 2021-10-25 09:38:05.652 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(686940, 687572), (687009, 687572), (687074, 687572), (687126, 687572), (687858, 722258), (722393, 728550), (728727, 730235), (730990, 731058), (731186, 737168), (731186, 731642), (731777, 737168), (737288, 740426), (737288, 737509), (737665, 740426), (740858, 741678), (740858, 741690), (741876, 742529), (745763, 745833), (746115, 746279), (746115, 746516), (746303, 746516), (746837, 746903), (747238, 747388)] 2021-10-25 09:38:05.656 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (686833, 687858, 'FBtr0302259_exon_1') contains intron (686940, 687572) 2021-10-25 09:38:05.657 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0302259_exon_1'] 2021-10-25 09:38:05.657 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021765: ['FBtr0074511', 'FBtr0308351'] 2021-10-25 09:38:06.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18091390, 18091554), (18091390, 18091951), (18091654, 18091951)] 2021-10-25 09:38:06.173 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:06.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021767: ['FBtr0071244', 'FBtr0345983'] 2021-10-25 09:38:06.313 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8449160, 8450103), (8450171, 8451097), (8451259, 8451356), (8451513, 8451582), (8451815, 8451891), (8452280, 8454131)] 2021-10-25 09:38:06.315 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:06.316 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.398 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021768: ['FBtr0075328', 'FBtr0305912'] 2021-10-25 09:38:06.452 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16805352, 16808393), (16808619, 16808694), (16808978, 16809167), (16809357, 16818906), (16819304, 16819367)] 2021-10-25 09:38:06.453 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:06.453 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.532 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021776: ['FBtr0083847', 'FBtr0083848', 'FBtr0335243'] 2021-10-25 09:38:06.620 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19932798, 19932888), (19932816, 19932888)] 2021-10-25 09:38:06.621 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (19932033, 19934998, 'FBtr0083847_exon_1') contains intron (19932798, 19932888) 2021-10-25 09:38:06.622 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083847_exon_1'] 2021-10-25 09:38:06.622 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.750 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021795: ['FBtr0088153', 'FBtr0345952'] 2021-10-25 09:38:06.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11370713, 11370772)] 2021-10-25 09:38:06.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:06.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:06.884 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021796: ['FBtr0080422', 'FBtr0336615'] 2021-10-25 09:38:06.938 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13005011, 13005066), (13005287, 13005430), (13005997, 13006349), (13005997, 13006352), (13007086, 13007145), (13009087, 13009135), (13011691, 13011765)] 2021-10-25 09:38:06.940 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:06.940 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.031 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021800: ['FBtr0077497', 'FBtr0077498'] 2021-10-25 09:38:07.092 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3803730, 3806968), (3806821, 3806968), (3807056, 3807132), (3807461, 3807524)] 2021-10-25 09:38:07.093 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.094 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.181 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021814: ['FBtr0088825', 'FBtr0310370'] 2021-10-25 09:38:07.241 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:38:07.243 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.243 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.320 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021818: ['FBtr0086962', 'FBtr0340214'] 2021-10-25 09:38:07.375 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17419024, 17419083), (17419247, 17419410)] 2021-10-25 09:38:07.376 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.377 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.468 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021825: ['FBtr0088641'] 2021-10-25 09:38:07.469 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0021825 has a single transcript. 2021-10-25 09:38:07.480 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021847: ['FBtr0086000', 'FBtr0305967'] 2021-10-25 09:38:07.547 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6210226, 6210286), (6210483, 6210546), (6210660, 6210727), (6210825, 6211595), (6210855, 6211595), (6212144, 6212218), (6213158, 6213215), (6213327, 6213468), (6213751, 6213811)] 2021-10-25 09:38:07.548 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.634 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021856: ['FBtr0081482', 'FBtr0330677'] 2021-10-25 09:38:07.698 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21261334, 21261411), (21261719, 21261776), (21261957, 21262012)] 2021-10-25 09:38:07.699 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.699 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021872: ['FBtr0310044', 'FBtr0310045'] 2021-10-25 09:38:07.835 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21144136, 21144200), (21144505, 21144528)] 2021-10-25 09:38:07.836 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21144200, 21145750, 'FBtr0310044_exon_2') contains intron (21144505, 21144528) 2021-10-25 09:38:07.837 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0310044_exon_2'] 2021-10-25 09:38:07.837 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:07.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021874: ['FBtr0078075'] 2021-10-25 09:38:07.919 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0021874 has a single transcript. 2021-10-25 09:38:07.931 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021875: ['FBtr0072253', 'FBtr0343432'] 2021-10-25 09:38:07.982 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24134284, 24134341), (24134426, 24134480)] 2021-10-25 09:38:07.984 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:07.984 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:08.063 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021895: ['FBtr0072234', 'FBtr0343278'] 2021-10-25 09:38:08.114 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23848799, 23850570), (23850867, 23850933), (23850867, 23851260), (23851288, 23851375)] 2021-10-25 09:38:08.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:08.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:08.194 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021906: ['FBtr0077915', 'FBtr0334842', 'FBtr0334843'] 2021-10-25 09:38:08.282 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1612988, 1613043), (1613423, 1613982)] 2021-10-25 09:38:08.283 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:08.284 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:08.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021944: ['FBtr0079352', 'FBtr0346584'] 2021-10-25 09:38:08.466 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:38:08.468 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:08.468 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:08.547 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021967: ['FBtr0077520', 'FBtr0077521'] 2021-10-25 09:38:08.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3466228, 3466315), (3466416, 3466786), (3467062, 3467132)] 2021-10-25 09:38:08.601 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (3466156, 3466416, 'FBtr0077521_exon_1') contains intron (3466228, 3466315) 2021-10-25 09:38:08.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077521_exon_1'] 2021-10-25 09:38:08.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:08.684 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021979: ['FBtr0071958', 'FBtr0071959', 'FBtr0071960', 'FBtr0071961', 'FBtr0343188', 'FBtr0343189', 'FBtr0343190', 'FBtr0343191', 'FBtr0343192'] 2021-10-25 09:38:08.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23067307, 23067370), (23067307, 23070606), (23067307, 23067631), (23067838, 23067946), (23067841, 23067946), (23068128, 23070606), (23069662, 23070606), (23070001, 23070606), (23070450, 23070606), (23070888, 23070964)] 2021-10-25 09:38:08.949 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23067272, 23067841, 'FBtr0071960_exon_1') contains intron (23067307, 23067370) 2021-10-25 09:38:08.950 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0071960_exon_1'] 2021-10-25 09:38:08.951 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:09.364 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0021995: ['FBtr0088788', 'FBtr0345935'] 2021-10-25 09:38:09.419 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8163767, 8164940), (8165048, 8165106), (8165931, 8166115), (8166848, 8166908), (8167452, 8167513)] 2021-10-25 09:38:09.420 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:09.421 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:09.488 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022023: ['FBtr0079030', 'FBtr0079031'] 2021-10-25 09:38:09.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5051570, 5051636), (5052314, 5052654)] 2021-10-25 09:38:09.544 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:09.544 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:09.615 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022027: ['FBtr0088694'] 2021-10-25 09:38:09.615 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022027 has a single transcript. 2021-10-25 09:38:09.628 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022029: ['FBtr0086912', 'FBtr0086913', 'FBtr0086914', 'FBtr0086915'] 2021-10-25 09:38:09.735 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17420573, 17421447), (17420573, 17423655), (17421946, 17423655), (17423963, 17424027), (17424134, 17424197), (17424505, 17424572), (17424759, 17424818), (17425412, 17425469)] 2021-10-25 09:38:09.736 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17420406, 17421946, 'FBtr0086913_exon_1') contains intron (17420573, 17421447) 2021-10-25 09:38:09.737 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0086913_exon_1'] 2021-10-25 09:38:09.737 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:10.094 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022069: ['FBtr0080473'] 2021-10-25 09:38:10.095 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022069 has a single transcript. 2021-10-25 09:38:10.105 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022097: ['FBtr0087335'] 2021-10-25 09:38:10.106 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022097 has a single transcript. 2021-10-25 09:38:10.116 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022153: ['FBtr0077432', 'FBtr0305968', 'FBtr0331447'] 2021-10-25 09:38:10.208 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4394489, 4394544), (4395178, 4395235), (4395950, 4396009), (4396127, 4396809), (4396172, 4396809), (4396906, 4396968), (4399074, 4399136), (4399299, 4399353), (4399600, 4399660)] 2021-10-25 09:38:10.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:10.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:10.339 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022160: ['FBtr0087307', 'FBtr0087308', 'FBtr0087309', 'FBtr0112900'] 2021-10-25 09:38:10.455 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15858010, 15858189), (15858893, 15859079), (15859939, 15860006), (15860119, 15860194), (15860304, 15860376), (15860530, 15860600), (15860753, 15861060), (15860753, 15861638), (15860753, 15862682), (15860753, 15861881)] 2021-10-25 09:38:10.457 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:10.457 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:10.637 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022213: ['FBtr0080930'] 2021-10-25 09:38:10.637 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022213 has a single transcript. 2021-10-25 09:38:10.647 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022224: ['FBtr0086211'] 2021-10-25 09:38:10.647 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022224 has a single transcript. 2021-10-25 09:38:10.658 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022238: ['FBtr0086776', 'FBtr0086777', 'FBtr0086778', 'FBtr0086779', 'FBtr0300483', 'FBtr0300484', 'FBtr0305270', 'FBtr0345357'] 2021-10-25 09:38:10.893 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18155342, 18155404), (18155491, 18155891), (18156165, 18157759), (18156165, 18156267), (18156165, 18156746), (18156165, 18157845), (18156165, 18157941), (18156165, 18156755), (18156165, 18157972)] 2021-10-25 09:38:10.895 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18155891, 18156379, 'FBtr0300483_exon_1') contains intron (18156165, 18156267) 2021-10-25 09:38:10.896 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300483_exon_1'] 2021-10-25 09:38:10.896 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:11.292 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022288: ['FBtr0086043', 'FBtr0335269'] 2021-10-25 09:38:11.341 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [] 2021-10-25 09:38:11.342 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:11.342 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:11.420 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022338: ['FBtr0083707', 'FBtr0321263'] 2021-10-25 09:38:11.474 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18981194, 18981551), (18981903, 18981979), (18982250, 18982307)] 2021-10-25 09:38:11.476 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:11.476 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:11.555 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022343: ['FBtr0072391', 'FBtr0072392', 'FBtr0309242', 'FBtr0339276'] 2021-10-25 09:38:11.670 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(24938271, 24938350), (24938673, 24938759), (24938842, 24938955), (24938842, 24938973), (24939217, 24939270), (24939217, 24939273)] 2021-10-25 09:38:11.672 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:11.672 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:12.366 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022344: ['FBtr0083358'] 2021-10-25 09:38:12.367 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022344 has a single transcript. 2021-10-25 09:38:12.378 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022349: ['FBtr0085839', 'FBtr0085840', 'FBtr0085841'] 2021-10-25 09:38:12.532 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(31748086, 31749206), (31748685, 31749206), (31749052, 31749206), (31749521, 31749580), (31750586, 31750644)] 2021-10-25 09:38:12.533 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:12.534 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:12.712 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022355: ['FBtr0074559', 'FBtr0346625'] 2021-10-25 09:38:12.769 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18388048, 18388123), (18388366, 18388573), (18389669, 18389731), (18390116, 18390179)] 2021-10-25 09:38:12.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:12.771 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:12.871 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022359: ['FBtr0082324'] 2021-10-25 09:38:12.871 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022359 has a single transcript. 2021-10-25 09:38:12.888 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022361: ['FBtr0089996', 'FBtr0089995', 'FBtr0089994', 'FBtr0089993', 'FBtr0310638', 'FBtr0310639', 'FBtr0310640'] 2021-10-25 09:38:13.112 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(558168, 560094), (558168, 560097), (558269, 560094), (558300, 560094), (558300, 560097), (559893, 560094), (560300, 560371), (560300, 560348), (560411, 560470), (560583, 560717), (560820, 564360), (564479, 564540), (564662, 565406), (564662, 565409), (565515, 565600)] 2021-10-25 09:38:13.115 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:13.115 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:13.495 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022382: ['FBtr0088437', 'FBtr0088438', 'FBtr0112901', 'FBtr0112902'] 2021-10-25 09:38:13.624 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9996621, 9997703), (9997220, 9997703), (9997551, 9997703), (9997889, 9998270), (9998346, 9998414), (9998562, 9998706), (9998802, 9999424), (9999525, 9999733), (9999915, 10005156), (10005377, 10024050), (10024202, 10025828), (10024202, 10025849), (10024359, 10025849)] 2021-10-25 09:38:13.627 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:13.627 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:13.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022699: ['FBtr0077017'] 2021-10-25 09:38:13.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022699 has a single transcript. 2021-10-25 09:38:13.872 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022700: ['FBtr0071543'] 2021-10-25 09:38:13.872 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022700 has a single transcript. 2021-10-25 09:38:13.881 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022702: ['FBtr0072795', 'FBtr0334075', 'FBtr0305966'] 2021-10-25 09:38:13.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1753310, 1753437), (1753943, 1754000), (1754165, 1754236), (1754360, 1755586)] 2021-10-25 09:38:13.955 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:13.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:14.076 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022709: ['FBtr0076017', 'FBtr0076018'] 2021-10-25 09:38:14.160 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12200638, 12200711), (12201089, 12201373), (12201496, 12201778), (12201496, 12203718), (12201862, 12203718)] 2021-10-25 09:38:14.161 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:14.162 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:14.305 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022710: ['FBtr0074073', 'FBtr0100142', 'FBtr0332497'] 2021-10-25 09:38:14.423 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15516272, 15516332), (15516433, 15516502), (15517693, 15519915), (15520193, 15521959), (15520193, 15539405), (15539926, 15553840)] 2021-10-25 09:38:14.424 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:14.425 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:14.558 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022724: ['FBtr0074514'] 2021-10-25 09:38:14.559 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022724 has a single transcript. 2021-10-25 09:38:14.568 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022740: ['FBtr0089547'] 2021-10-25 09:38:14.568 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022740 has a single transcript. 2021-10-25 09:38:14.586 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022764: ['FBtr0087887', 'FBtr0087888', 'FBtr0087889', 'FBtr0087890', 'FBtr0303565', 'FBtr0303566', 'FBtr0304683', 'FBtr0339650', 'FBtr0339651', 'FBtr0347014'] 2021-10-25 09:38:14.918 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12576499, 12576567), (12576993, 12579128), (12576993, 12577453), (12577653, 12579128), (12577709, 12579128), (12578285, 12579128), (12578551, 12579128), (12579356, 12579414), (12579621, 12579723), (12580053, 12580115), (12580612, 12581201), (12580630, 12581201), (12581577, 12581638), (12581939, 12582288), (12581951, 12582288), (12583829, 12583900), (12585183, 12585254), (12586072, 12592328), (12586072, 12588715), (12586072, 12592728), (12592445, 12592728)] 2021-10-25 09:38:14.920 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0087888_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.920 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0087889_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.921 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0087890_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.923 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0339650_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.924 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0339651_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.925 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12592328, 12592917, 'FBtr0347014_exon_1') contains intron (12592445, 12592728) 2021-10-25 09:38:14.925 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087888_exon_1', 'FBtr0087889_exon_1', 'FBtr0087890_exon_1', 'FBtr0339650_exon_1', 'FBtr0339651_exon_1', 'FBtr0347014_exon_1'] 2021-10-25 09:38:14.925 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:15.434 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022768: ['FBtr0070685', 'FBtr0343531'] 2021-10-25 09:38:15.554 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4683422, 4683486), (4683934, 4685111)] 2021-10-25 09:38:15.555 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:15.556 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:15.698 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022770: ['FBtr0077335', 'FBtr0077336', 'FBtr0308243'] 2021-10-25 09:38:15.776 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20244763, 20244873), (20244934, 20246904), (20247120, 20247191), (20247386, 20247548)] 2021-10-25 09:38:15.778 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20244646, 20244934, 'FBtr0077336_exon_1') contains intron (20244763, 20244873) 2021-10-25 09:38:15.778 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (20247191, 20248203, 'FBtr0308243_exon_4') contains intron (20247386, 20247548) 2021-10-25 09:38:15.779 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0077336_exon_1', 'FBtr0308243_exon_4'] 2021-10-25 09:38:15.779 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:15.904 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022772: ['FBtr0088959'] 2021-10-25 09:38:15.905 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022772 has a single transcript. 2021-10-25 09:38:15.915 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022774: ['FBtr0074961'] 2021-10-25 09:38:15.915 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022774 has a single transcript. 2021-10-25 09:38:15.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022786: ['FBtr0071070'] 2021-10-25 09:38:15.923 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022786 has a single transcript. 2021-10-25 09:38:15.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022787: ['FBtr0301715', 'FBtr0344471'] 2021-10-25 09:38:16.018 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15973824, 15977176), (15976664, 15977176), (15977243, 15977308), (15978222, 15978286), (15980406, 15980468), (15982510, 15982579), (15982820, 15982881)] 2021-10-25 09:38:16.019 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:16.020 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:16.166 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022800: ['FBtr0084874'] 2021-10-25 09:38:16.166 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022800 has a single transcript. 2021-10-25 09:38:16.178 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022893: ['FBtr0100293', 'FBtr0085919', 'FBtr0085920'] 2021-10-25 09:38:16.299 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21627757, 21627841), (21628209, 21629666), (21629776, 21629884)] 2021-10-25 09:38:16.300 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21629666, 21629932, 'FBtr0100293_exon_1') contains intron (21629776, 21629884) 2021-10-25 09:38:16.301 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21629666, 21629932, 'FBtr0085919_exon_1') contains intron (21629776, 21629884) 2021-10-25 09:38:16.301 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0100293_exon_1', 'FBtr0085919_exon_1'] 2021-10-25 09:38:16.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:16.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022935: ['FBtr0077016'] 2021-10-25 09:38:16.450 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022935 has a single transcript. 2021-10-25 09:38:16.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022936: ['FBtr0078439'] 2021-10-25 09:38:16.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022936 has a single transcript. 2021-10-25 09:38:16.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022942: ['FBtr0070683', 'FBtr0070684'] 2021-10-25 09:38:16.529 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4650372, 4650431), (4651770, 4651831), (4651935, 4656582), (4657071, 4657140), (4657265, 4657335), (4657524, 4657592)] 2021-10-25 09:38:16.531 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:16.531 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:16.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022943: ['FBtr0083551'] 2021-10-25 09:38:16.680 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0022943 has a single transcript. 2021-10-25 09:38:16.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022959: ['FBtr0076027', 'FBtr0305992'] 2021-10-25 09:38:16.861 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12122154, 12122675), (12122773, 12122836), (12123574, 12124711)] 2021-10-25 09:38:16.863 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (12121273, 12122773, 'FBtr0305992_exon_3') contains intron (12122154, 12122675) 2021-10-25 09:38:16.863 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0305992_exon_3'] 2021-10-25 09:38:16.863 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:16.947 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022960: ['FBtr0086182', 'FBtr0086183'] 2021-10-25 09:38:17.045 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6977157, 6977215), (6977602, 6977691), (6978597, 6985411), (6978600, 6985411)] 2021-10-25 09:38:17.046 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:17.046 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:17.188 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022981: ['FBtr0078859', 'FBtr0305313'] 2021-10-25 09:38:17.268 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4646330, 4646575), (4646678, 4646745), (4647320, 4647394), (4647338, 4647394)] 2021-10-25 09:38:17.269 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:17.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:17.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022984: ['FBtr0307214', 'FBtr0290254', 'FBtr0339538'] 2021-10-25 09:38:17.520 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22410020, 22410310), (22410396, 22410538), (22410628, 22410686), (22411051, 22411111), (22411233, 22411292)] 2021-10-25 09:38:17.521 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:17.521 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:17.732 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022985: ['FBtr0071828', 'FBtr0344880', 'FBtr0339535'] 2021-10-25 09:38:17.881 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22416366, 22416427), (22417031, 22417095), (22417196, 22417251), (22417636, 22417702), (22417636, 22417692)] 2021-10-25 09:38:17.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:17.883 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:18.018 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022986: ['FBtr0071843', 'FBtr0339537', 'FBtr0346637'] 2021-10-25 09:38:18.163 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(22413340, 22414100), (22413340, 22414151), (22414282, 22414407), (22414509, 22414569), (22415074, 22415139)] 2021-10-25 09:38:18.164 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (22413146, 22414282, 'FBtr0339537_exon_4') contains intron (22413340, 22414100) 2021-10-25 09:38:18.164 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0339537_exon_4'] 2021-10-25 09:38:18.165 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:18.342 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0022987: ['FBtr0086923', 'FBtr0086925', 'FBtr0306248', 'FBtr0331464'] 2021-10-25 09:38:18.487 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17469717, 17470576), (17469717, 17470566), (17470204, 17470576), (17470886, 17470941), (17471066, 17471171), (17471623, 17471693), (17471795, 17471854), (17472075, 17472135), (17472434, 17472492), (17472804, 17473086), (17472809, 17473086)] 2021-10-25 09:38:18.489 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:18.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:18.665 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023000: ['FBtr0072570', 'FBtr0072571', 'FBtr0306850'] 2021-10-25 09:38:18.780 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(343652, 344106), (343652, 343954), (344039, 344106), (344301, 344366), (344538, 344614), (344869, 344922), (345099, 345157), (345311, 345374), (345885, 346814), (346338, 346814)] 2021-10-25 09:38:18.782 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:18.782 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:18.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023001: ['FBtr0100141', 'FBtr0302044', 'FBtr0333373'] 2021-10-25 09:38:19.051 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7135227, 7138225), (7135227, 7139172), (7138511, 7139172), (7139327, 7139385), (7139637, 7139699), (7140501, 7140557), (7140501, 7140563), (7141306, 7141364), (7141602, 7141726), (7141602, 7141708), (7141878, 7141943), (7142072, 7142136), (7142418, 7142477)] 2021-10-25 09:38:19.053 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:19.053 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:19.208 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023023: ['FBtr0089686', 'FBtr0089685', 'FBtr0114453'] 2021-10-25 09:38:19.298 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5571231, 5574252), (5574340, 5574402), (5574466, 5574662), (5574853, 5574912), (5574989, 5575240), (5575375, 5575435), (5575498, 5575778), (5575925, 5577035), (5575925, 5576174), (5576413, 5577035), (5576413, 5577592), (5577259, 5577592), (5577828, 5577896), (5578370, 5578437)] 2021-10-25 09:38:19.300 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:19.301 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:19.451 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023076: ['FBtr0076785', 'FBtr0100132', 'FBtr0100134', 'FBtr0334647', 'FBtr0334648'] 2021-10-25 09:38:19.606 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7765718, 7765780), (7766403, 7766462), (7766819, 7766872), (7767089, 7768468), (7767089, 7767148), (7768648, 7768709), (7768650, 7768709), (7768858, 7770022), (7768870, 7770022), (7770322, 7775495)] 2021-10-25 09:38:19.608 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:19.608 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:19.861 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023081: ['FBtr0072287'] 2021-10-25 09:38:19.862 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023081 has a single transcript. 2021-10-25 09:38:19.875 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023083: ['FBtr0083637', 'FBtr0083638', 'FBtr0290107', 'FBtr0290209', 'FBtr0290210', 'FBtr0344290', 'FBtr0347417', 'FBtr0347418'] 2021-10-25 09:38:20.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18573126, 18573191), (18573525, 18577566), (18573525, 18586278), (18577584, 18586278), (18581504, 18586278), (18582354, 18582583), (18582705, 18586278), (18584586, 18586278), (18585974, 18586278), (18586067, 18586278)] 2021-10-25 09:38:20.121 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18573090, 18573525, 'FBtr0083637_exon_1') contains intron (18573126, 18573191) 2021-10-25 09:38:20.122 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (18573090, 18573525, 'FBtr0290107_exon_1') contains intron (18573126, 18573191) 2021-10-25 09:38:20.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0083637_exon_1', 'FBtr0290107_exon_1'] 2021-10-25 09:38:20.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:20.538 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023090: ['FBtr0081516'] 2021-10-25 09:38:20.539 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023090 has a single transcript. 2021-10-25 09:38:20.548 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023091: ['FBtr0081514', 'FBtr0333354'] 2021-10-25 09:38:20.597 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21332026, 21339070), (21339284, 21339348)] 2021-10-25 09:38:20.598 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:20.599 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:20.690 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023094: ['FBtr0074924'] 2021-10-25 09:38:20.690 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023094 has a single transcript. 2021-10-25 09:38:20.703 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023095: ['FBtr0075832', 'FBtr0075833', 'FBtr0305480', 'FBtr0346864'] 2021-10-25 09:38:20.824 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13229140, 13238674), (13238714, 13251153), (13251211, 13265179), (13251211, 13275561), (13265392, 13275561)] 2021-10-25 09:38:20.826 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:20.826 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:20.847 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0075832': ['FBtr0305480', 'FBtr0346864']} 2021-10-25 09:38:20.848 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0305480', 'FBtr0346864']] 2021-10-25 09:38:20.919 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023096: ['FBtr0273418'] 2021-10-25 09:38:20.920 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023096 has a single transcript. 2021-10-25 09:38:20.936 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023097: ['FBtr0083912', 'FBtr0300617', 'FBtr0330043', 'FBtr0334637', 'FBtr0334638', 'FBtr0334639'] 2021-10-25 09:38:21.120 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20594044, 20606280), (20607667, 20607994), (20607673, 20607994), (20608078, 20608149), (20608535, 20608631), (20608553, 20608631), (20608761, 20608895), (20609161, 20609225), (20609400, 20609939), (20609400, 20609963), (20610300, 20610386), (20610510, 20610575), (20610510, 20610572)] 2021-10-25 09:38:21.123 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:21.123 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:21.150 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0083912': ['FBtr0330043']} 2021-10-25 09:38:21.150 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330043']] 2021-10-25 09:38:21.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023129: ['FBtr0076457'] 2021-10-25 09:38:21.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023129 has a single transcript. 2021-10-25 09:38:21.356 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023130: ['FBtr0070279', 'FBtr0330407', 'FBtr0333116'] 2021-10-25 09:38:21.440 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1693958, 1694121), (1695474, 1695539), (1695474, 1695531)] 2021-10-25 09:38:21.441 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1693614, 1695474, 'FBtr0070279_exon_2') contains intron (1693958, 1694121) 2021-10-25 09:38:21.441 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1693614, 1695474, 'FBtr0330407_exon_2') contains intron (1693958, 1694121) 2021-10-25 09:38:21.442 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070279_exon_2', 'FBtr0330407_exon_2'] 2021-10-25 09:38:21.442 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:21.571 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023143: ['FBtr0088499', 'FBtr0339517'] 2021-10-25 09:38:21.628 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9689553, 9689610), (9689919, 9689981), (9691703, 9692281)] 2021-10-25 09:38:21.629 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:21.629 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:21.641 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0088499': ['FBtr0339517']} 2021-10-25 09:38:21.641 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0339517']] 2021-10-25 09:38:21.652 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023167: ['FBtr0087986'] 2021-10-25 09:38:21.652 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023167 has a single transcript. 2021-10-25 09:38:21.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023169: ['FBtr0070216', 'FBtr0070217', 'FBtr0070218'] 2021-10-25 09:38:21.749 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1375755, 1375861), (1375755, 1375869), (1376187, 1376695)] 2021-10-25 09:38:21.750 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1375535, 1376187, 'FBtr0070217_exon_1') contains intron (1375755, 1375861) 2021-10-25 09:38:21.751 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070217_exon_1'] 2021-10-25 09:38:21.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:21.867 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023170: ['FBtr0072185'] 2021-10-25 09:38:21.867 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023170 has a single transcript. 2021-10-25 09:38:21.877 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023171: ['FBtr0088883', 'FBtr0088884'] 2021-10-25 09:38:22.066 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7931224, 7931284), (7931555, 7931610), (7931846, 7931898), (7931846, 7932007), (7931955, 7932007)] 2021-10-25 09:38:22.067 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:22.067 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:22.161 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023172: ['FBtr0086969', 'FBtr0086970', 'FBtr0086971', 'FBtr0340124', 'FBtr0305083'] 2021-10-25 09:38:22.307 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17027328, 17028672), (17027339, 17028672), (17029021, 17031124), (17031917, 17032254), (17032347, 17032408), (17032466, 17034636), (17034776, 17034834), (17035008, 17036816), (17035008, 17035345), (17035008, 17035654), (17036407, 17036816), (17036901, 17036970), (17037790, 17037845), (17038029, 17038095), (17038207, 17038272), (17038422, 17038478), (17038529, 17038594), (17038904, 17038962), (17038904, 17038968), (17039100, 17040387), (17040824, 17040895), (17041487, 17041554), (17041732, 17041799), (17041993, 17042054), (17043627, 17043689), (17043899, 17043959), (17044070, 17044131)] 2021-10-25 09:38:22.311 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:22.312 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:22.569 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023174: ['FBtr0075629'] 2021-10-25 09:38:22.569 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023174 has a single transcript. 2021-10-25 09:38:22.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023175: ['FBtr0089998'] 2021-10-25 09:38:22.579 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023175 has a single transcript. 2021-10-25 09:38:22.588 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023177: ['FBtr0077324', 'FBtr0077325', 'FBtr0345017', 'FBtr0346620', 'FBtr0445386'] 2021-10-25 09:38:22.740 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(20421994, 20422058), (20422952, 20423645), (20422976, 20423645), (20423000, 20423645)] 2021-10-25 09:38:22.741 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:22.741 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:22.943 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023178: ['FBtr0085024'] 2021-10-25 09:38:22.944 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023178 has a single transcript. 2021-10-25 09:38:22.955 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023179: ['FBtr0085048'] 2021-10-25 09:38:22.955 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023179 has a single transcript. 2021-10-25 09:38:22.962 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023180: ['FBtr0088482'] 2021-10-25 09:38:22.963 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023180 has a single transcript. 2021-10-25 09:38:22.969 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023181: ['FBtr0072425'] 2021-10-25 09:38:22.969 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023181 has a single transcript. 2021-10-25 09:38:22.976 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023197: ['FBtr0075207', 'FBtr0303101'] 2021-10-25 09:38:23.030 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17547388, 17548177), (17548462, 17548549), (17548812, 17548873)] 2021-10-25 09:38:23.030 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:23.031 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:23.103 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023212: ['FBtr0083947'] 2021-10-25 09:38:23.104 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023212 has a single transcript. 2021-10-25 09:38:23.118 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023213: ['FBtr0089243', 'FBtr0112904', 'FBtr0289951'] 2021-10-25 09:38:23.213 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(915553, 915616), (915718, 915836), (916059, 916120), (916267, 916866), (917090, 917274), (917743, 918323), (918481, 918535), (918776, 918902), (921199, 925082), (925138, 925574), (925686, 925767), (925948, 926010), (926661, 927392), (926661, 929821), (928151, 929821), (930023, 930079), (930131, 930281), (930131, 930511)] 2021-10-25 09:38:23.216 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:23.216 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:23.344 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023214: ['FBtr0086652'] 2021-10-25 09:38:23.345 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023214 has a single transcript. 2021-10-25 09:38:23.363 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023215: ['FBtr0070578', 'FBtr0070579', 'FBtr0307277', 'FBtr0307278', 'FBtr0301821', 'FBtr0301822', 'FBtr0301823', 'FBtr0301824', 'FBtr0301825', 'FBtr0343578'] 2021-10-25 09:38:23.656 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3672039, 3683352), (3683449, 3692952), (3688264, 3692952), (3688495, 3692952), (3689482, 3692952), (3693932, 3698741), (3693932, 3698744), (3693932, 3698339), (3693932, 3698117), (3699027, 3699113), (3699273, 3699338), (3699486, 3699683), (3699486, 3699686), (3699787, 3699929), (3699787, 3699932), (3700464, 3700670)] 2021-10-25 09:38:23.660 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:23.660 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:24.147 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023216: ['FBtr0307279', 'FBtr0307280'] 2021-10-25 09:38:24.208 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3670587, 3670654)] 2021-10-25 09:38:24.210 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:24.210 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:24.290 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023388: ['FBtr0081504', 'FBtr0081503', 'FBtr0301276', 'FBtr0306017', 'FBtr0333086', 'FBtr0333087'] 2021-10-25 09:38:24.458 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21135029, 21137514), (21137106, 21137514), (21137688, 21137756), (21138030, 21138711), (21138030, 21138112), (21138358, 21138711), (21138361, 21138711), (21139602, 21139675), (21139942, 21140008), (21140156, 21140216), (21140478, 21140568), (21140490, 21140568), (21141008, 21141177), (21141552, 21141624), (21142012, 21142238)] 2021-10-25 09:38:24.462 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:24.462 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:24.745 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023395: ['FBtr0074998'] 2021-10-25 09:38:24.745 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023395 has a single transcript. 2021-10-25 09:38:24.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023407: ['FBtr0080513', 'FBtr0080514', 'FBtr0332509'] 2021-10-25 09:38:24.847 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13506683, 13508620), (13509104, 13509466), (13509792, 13512959), (13513473, 13534906), (13535026, 13546910), (13547161, 13549131), (13547161, 13547751), (13547303, 13549131)] 2021-10-25 09:38:24.849 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:24.849 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:24.993 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023415: ['FBtr0080158', 'FBtr0344020'] 2021-10-25 09:38:25.047 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(11016423, 11016493), (11016423, 11016489)] 2021-10-25 09:38:25.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:25.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:25.125 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023416: ['FBtr0085897', 'FBtr0100324'] 2021-10-25 09:38:25.202 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21632705, 21633265), (21633305, 21633373), (21633915, 21634419), (21634609, 21634725), (21635035, 21635091), (21635210, 21637658), (21635210, 21635619), (21635731, 21637658), (21637786, 21637957), (21638116, 21638229), (21638368, 21639240), (21639503, 21639641), (21640005, 21640727), (21641013, 21641072), (21641145, 21641248), (21641324, 21641378), (21641604, 21643169), (21643252, 21643763), (21644219, 21646594)] 2021-10-25 09:38:25.203 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:25.204 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:25.299 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023441: ['FBtr0087346', 'FBtr0087347', 'FBtr0087348', 'FBtr0087343', 'FBtr0087344', 'FBtr0087345', 'FBtr0302330', 'FBtr0306648'] 2021-10-25 09:38:25.543 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15658401, 15658609), (15658848, 15662923), (15663170, 15663231), (15663378, 15663471), (15663798, 15663918), (15664189, 15664323), (15664434, 15664890), (15664434, 15665312), (15664434, 15664823), (15665367, 15665424), (15665514, 15665710), (15665987, 15667610), (15667865, 15671991), (15672285, 15676488), (15672285, 15676501), (15672285, 15675516)] 2021-10-25 09:38:25.545 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087346_exon_9') contains intron (15663378, 15663471) 2021-10-25 09:38:25.545 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087347_exon_4') contains intron (15663378, 15663471) 2021-10-25 09:38:25.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087348_exon_4') contains intron (15663378, 15663471) 2021-10-25 09:38:25.546 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087343_exon_9') contains intron (15663378, 15663471) 2021-10-25 09:38:25.547 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087344_exon_9') contains intron (15663378, 15663471) 2021-10-25 09:38:25.548 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (15663231, 15663798, 'FBtr0087345_exon_9') contains intron (15663378, 15663471) 2021-10-25 09:38:25.549 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087346_exon_9', 'FBtr0087347_exon_4', 'FBtr0087348_exon_4', 'FBtr0087343_exon_9', 'FBtr0087344_exon_9', 'FBtr0087345_exon_9'] 2021-10-25 09:38:25.549 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:25.913 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023458: ['FBtr0303341'] 2021-10-25 09:38:25.914 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023458 has a single transcript. 2021-10-25 09:38:25.923 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023477: ['FBtr0072141'] 2021-10-25 09:38:25.924 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023477 has a single transcript. 2021-10-25 09:38:25.935 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023479: ['FBtr0076525', 'FBtr0076527', 'FBtr0344980', 'FBtr0344981'] 2021-10-25 09:38:26.054 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9074829, 9075063), (9075622, 9075671), (9075622, 9087848), (9075866, 9076019), (9076265, 9076318), (9076795, 9076857), (9076978, 9084485), (9084919, 9085057), (9085300, 9085364), (9085829, 9085887), (9087267, 9087323), (9087788, 9087848), (9088115, 9089354), (9089948, 9090018), (9090410, 9090467), (9090623, 9090684), (9091465, 9091532), (9091625, 9091736), (9091820, 9091881)] 2021-10-25 09:38:26.055 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9087848, 9089948, 'FBtr0076525_exon_3') contains intron (9088115, 9089354) 2021-10-25 09:38:26.057 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (9087848, 9089948, 'FBtr0344981_exon_12') contains intron (9088115, 9089354) 2021-10-25 09:38:26.057 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0076525_exon_3', 'FBtr0344981_exon_12'] 2021-10-25 09:38:26.058 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:26.245 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023489: ['FBtr0078070'] 2021-10-25 09:38:26.246 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023489 has a single transcript. 2021-10-25 09:38:26.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023495: ['FBtr0082771'] 2021-10-25 09:38:26.255 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023495 has a single transcript. 2021-10-25 09:38:26.262 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023496: ['FBtr0080124', 'FBtr0340248'] 2021-10-25 09:38:26.316 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10700031, 10700089), (10700227, 10700295), (10700651, 10700716), (10700894, 10701159)] 2021-10-25 09:38:26.317 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:26.318 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:26.394 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023506: ['FBtr0071198'] 2021-10-25 09:38:26.394 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023506 has a single transcript. 2021-10-25 09:38:26.405 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023507: ['FBtr0070381', 'FBtr0070382', 'FBtr0070383'] 2021-10-25 09:38:26.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2141606, 2142991), (2141606, 2141898), (2142002, 2142991), (2142929, 2142991), (2143248, 2143310), (2143452, 2143526), (2144220, 2144286)] 2021-10-25 09:38:26.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:26.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:26.617 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023508: ['FBtr0070317', 'FBtr0332586'] 2021-10-25 09:38:26.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1923077, 1923146), (1923865, 1924098), (1924285, 1924527), (1924789, 1924850), (1925036, 1925102), (1925435, 1925502), (1926379, 1926445), (1926632, 1926693), (1926918, 1926978)] 2021-10-25 09:38:26.674 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1922980, 1923865, 'FBtr0070317_exon_1') contains intron (1923077, 1923146) 2021-10-25 09:38:26.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070317_exon_1'] 2021-10-25 09:38:26.675 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:26.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023509: ['FBtr0070315'] 2021-10-25 09:38:26.755 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023509 has a single transcript. 2021-10-25 09:38:26.765 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023510: ['FBtr0070316', 'FBtr0344155'] 2021-10-25 09:38:26.818 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1909450, 1910640)] 2021-10-25 09:38:26.819 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:26.819 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:26.902 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023511: ['FBtr0070352', 'FBtr0070353', 'FBtr0070354', 'FBtr0332580', 'FBtr0305583'] 2021-10-25 09:38:27.046 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1904281, 1904544), (1904281, 1904492), (1906235, 1906305), (1907434, 1907494), (1907646, 1908244), (1907817, 1908349)] 2021-10-25 09:38:27.048 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:27.048 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:27.291 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023512: ['FBtr0070350', 'FBtr0070351'] 2021-10-25 09:38:27.348 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1920767, 1920828), (1921115, 1921180), (1922469, 1922542), (1922667, 1922730)] 2021-10-25 09:38:27.349 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:27.350 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:27.429 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023513: ['FBtr0070310', 'FBtr0339600'] 2021-10-25 09:38:27.486 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1869227, 1869297), (1869242, 1869297), (1869878, 1869943)] 2021-10-25 09:38:27.488 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:27.488 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:27.565 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023514: ['FBtr0070312'] 2021-10-25 09:38:27.566 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023514 has a single transcript. 2021-10-25 09:38:27.578 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023515: ['FBtr0070369', 'FBtr0070370', 'FBtr0339494'] 2021-10-25 09:38:27.661 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1862643, 1862702), (1862960, 1863026), (1863705, 1863768), (1864107, 1864169), (1865622, 1865688)] 2021-10-25 09:38:27.662 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1864169, 1865835, 'FBtr0070369_exon_1') contains intron (1865622, 1865688) 2021-10-25 09:38:27.663 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070369_exon_1'] 2021-10-25 09:38:27.663 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:27.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023516: ['FBtr0070367', 'FBtr0070368'] 2021-10-25 09:38:27.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1868714, 1868786)] 2021-10-25 09:38:27.849 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1866831, 1868803, 'FBtr0070368_exon_1') contains intron (1868714, 1868786) 2021-10-25 09:38:27.850 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070368_exon_1'] 2021-10-25 09:38:27.850 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:27.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023517: ['FBtr0070366', 'FBtr0339601'] 2021-10-25 09:38:27.989 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1872903, 1872972), (1872906, 1872972)] 2021-10-25 09:38:27.990 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:27.991 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:28.077 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023518: ['FBtr0070362', 'FBtr0070363'] 2021-10-25 09:38:28.129 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1882248, 1882318), (1882501, 1882555), (1882685, 1882741), (1883337, 1883416), (1883941, 1884006), (1889294, 1889357)] 2021-10-25 09:38:28.131 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1884006, 1889950, 'FBtr0070363_exon_1') contains intron (1889294, 1889357) 2021-10-25 09:38:28.131 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070363_exon_1'] 2021-10-25 09:38:28.132 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:28.212 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023519: ['FBtr0070314', 'FBtr0332579'] 2021-10-25 09:38:28.267 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1890395, 1890477), (1890543, 1890612)] 2021-10-25 09:38:28.268 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:28.269 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:28.351 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023520: ['FBtr0070349'] 2021-10-25 09:38:28.352 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023520 has a single transcript. 2021-10-25 09:38:28.362 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023521: ['FBtr0070321'] 2021-10-25 09:38:28.363 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023521 has a single transcript. 2021-10-25 09:38:28.373 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023522: ['FBtr0070320', 'FBtr0070318', 'FBtr0070319', 'FBtr0332587', 'FBtr0332588'] 2021-10-25 09:38:28.517 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1927893, 1928333), (1927919, 1928333), (1928265, 1928333), (1928580, 1929000), (1928580, 1929051), (1929170, 1929243), (1929384, 1929453), (1929711, 1929772)] 2021-10-25 09:38:28.519 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:28.519 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:28.747 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023523: ['FBtr0070397'] 2021-10-25 09:38:28.747 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023523 has a single transcript. 2021-10-25 09:38:28.758 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023524: ['FBtr0070415', 'FBtr0340208'] 2021-10-25 09:38:28.816 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2256101, 2256159), (2257495, 2257879), (2257498, 2257879), (2258266, 2258327), (2258741, 2259720)] 2021-10-25 09:38:28.818 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:28.818 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:28.903 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023525: ['FBtr0070417', 'FBtr0342768'] 2021-10-25 09:38:28.954 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2250387, 2250443), (2250580, 2250646), (2250949, 2251012), (2251094, 2251194), (2251354, 2251671)] 2021-10-25 09:38:28.956 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:28.956 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:29.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023526: ['FBtr0070408', 'FBtr0332962'] 2021-10-25 09:38:29.097 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2282517, 2292324), (2293293, 2293352)] 2021-10-25 09:38:29.099 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2292324, 2293411, 'FBtr0070408_exon_1') contains intron (2293293, 2293352) 2021-10-25 09:38:29.099 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070408_exon_1'] 2021-10-25 09:38:29.100 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:29.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023527: ['FBtr0070398'] 2021-10-25 09:38:29.177 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023527 has a single transcript. 2021-10-25 09:38:29.189 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023528: ['FBtr0070412', 'FBtr0346648', 'FBtr0300793', 'FBtr0345315'] 2021-10-25 09:38:29.310 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2265485, 2265547), (2265816, 2265876), (2265955, 2266035), (2266184, 2266247), (2266539, 2266596), (2266671, 2266819), (2267107, 2267176), (2267293, 2268937), (2269704, 2270637), (2269704, 2270698)] 2021-10-25 09:38:29.311 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2264990, 2265816, 'FBtr0070412_exon_9') contains intron (2265485, 2265547) 2021-10-25 09:38:29.312 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2264990, 2265816, 'FBtr0300793_exon_9') contains intron (2265485, 2265547) 2021-10-25 09:38:29.313 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2264990, 2265816, 'FBtr0345315_exon_8') contains intron (2265485, 2265547) 2021-10-25 09:38:29.313 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070412_exon_9', 'FBtr0300793_exon_9', 'FBtr0345315_exon_8'] 2021-10-25 09:38:29.314 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:29.527 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023529: ['FBtr0070411', 'FBtr0300792'] 2021-10-25 09:38:29.579 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2273951, 2274025), (2274339, 2274874), (2274339, 2274649)] 2021-10-25 09:38:29.580 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:29.580 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:29.662 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023530: ['FBtr0070283'] 2021-10-25 09:38:29.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023530 has a single transcript. 2021-10-25 09:38:29.686 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023531: ['FBtr0089815', 'FBtr0089814', 'FBtr0330408', 'FBtr0308321', 'FBtr0308322', 'FBtr0308323', 'FBtr0308324', 'FBtr0333117', 'FBtr0333118', 'FBtr0333119', 'FBtr0333120'] 2021-10-25 09:38:30.022 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1675248, 1675318), (1677065, 1677134), (1677078, 1677134), (1677317, 1680064), (1677317, 1681399), (1680108, 1681399), (1681493, 1681572), (1681755, 1681807), (1682270, 1683096), (1682270, 1682366), (1682429, 1682697), (1682429, 1683096), (1682781, 1682862), (1682781, 1683096), (1682928, 1683096), (1683260, 1684452), (1684557, 1684630), (1684745, 1685186), (1684745, 1685646), (1685279, 1685646), (1685535, 1685646), (1685737, 1690199), (1685737, 1687929), (1690808, 1690872), (1691012, 1691079), (1691130, 1691206), (1691133, 1691206), (1691357, 1692438), (1691357, 1692296), (1691357, 1692375)] 2021-10-25 09:38:30.025 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677065, 'FBtr0308321_exon_17') contains intron (1675248, 1675318) 2021-10-25 09:38:30.026 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677065, 'FBtr0308323_exon_18') contains intron (1675248, 1675318) 2021-10-25 09:38:30.027 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677065, 'FBtr0308324_exon_18') contains intron (1675248, 1675318) 2021-10-25 09:38:30.028 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673109, 1677065, 'FBtr0333117_exon_17') contains intron (1675248, 1675318) 2021-10-25 09:38:30.029 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677078, 'FBtr0333118_exon_18') contains intron (1675248, 1675318) 2021-10-25 09:38:30.030 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677065, 'FBtr0333119_exon_16') contains intron (1675248, 1675318) 2021-10-25 09:38:30.031 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1673337, 1677065, 'FBtr0333120_exon_15') contains intron (1675248, 1675318) 2021-10-25 09:38:30.031 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0308321_exon_17', 'FBtr0308323_exon_18', 'FBtr0308324_exon_18', 'FBtr0333117_exon_17', 'FBtr0333118_exon_18', 'FBtr0333119_exon_16', 'FBtr0333120_exon_15'] 2021-10-25 09:38:30.032 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:30.067 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0089815': ['FBtr0330408']} 2021-10-25 09:38:30.068 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330408']] 2021-10-25 09:38:30.544 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023534: ['FBtr0070080', 'FBtr0340145'] 2021-10-25 09:38:30.600 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(494716, 494777), (495117, 495468)] 2021-10-25 09:38:30.601 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:30.601 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:30.678 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023535: ['FBtr0070088'] 2021-10-25 09:38:30.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023535 has a single transcript. 2021-10-25 09:38:30.689 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023536: ['FBtr0070079'] 2021-10-25 09:38:30.689 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023536 has a single transcript. 2021-10-25 09:38:30.697 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023537: ['FBtr0070092', 'FBtr0070093'] 2021-10-25 09:38:30.748 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(492628, 493387), (492628, 492742)] 2021-10-25 09:38:30.750 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:30.751 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:30.838 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023540: ['FBtr0070385', 'FBtr0310076', 'FBtr0310500', 'FBtr0310501'] 2021-10-25 09:38:30.947 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2162278, 2168068), (2166842, 2167004), (2167167, 2168068), (2167167, 2170788), (2168233, 2170788), (2171085, 2171154)] 2021-10-25 09:38:30.948 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2166808, 2167167, 'FBtr0070385_exon_1') contains intron (2166842, 2167004) 2021-10-25 09:38:30.948 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (2166808, 2167167, 'FBtr0310076_exon_1') contains intron (2166842, 2167004) 2021-10-25 09:38:30.949 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070385_exon_1', 'FBtr0310076_exon_1'] 2021-10-25 09:38:30.949 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.109 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023541: ['FBtr0070426', 'FBtr0310077'] 2021-10-25 09:38:31.171 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2174400, 2174463), (2174920, 2175064), (2174920, 2175073)] 2021-10-25 09:38:31.172 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:31.173 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.254 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023542: ['FBtr0070425'] 2021-10-25 09:38:31.254 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023542 has a single transcript. 2021-10-25 09:38:31.264 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023545: ['FBtr0070347'] 2021-10-25 09:38:31.264 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023545 has a single transcript. 2021-10-25 09:38:31.273 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023549: ['FBtr0070393', 'FBtr0342765'] 2021-10-25 09:38:31.339 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(2189429, 2198631), (2195039, 2198631), (2198943, 2199819), (2199939, 2200004), (2200606, 2200674), (2200869, 2200935), (2201061, 2204106), (2204437, 2204508), (2204709, 2204764)] 2021-10-25 09:38:31.341 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:31.341 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.436 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0023550: ['FBtr0070423'] 2021-10-25 09:38:31.436 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0023550 has a single transcript. 2021-10-25 09:38:31.455 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024150: ['FBtr0330066', 'FBtr0330067', 'FBtr0301701', 'FBtr0333358', 'FBtr0305501'] 2021-10-25 09:38:31.609 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21137220, 21137357), (21137503, 21137565), (21137794, 21137853), (21138257, 21138330), (21138511, 21138652), (21138748, 21138803), (21139570, 21139666), (21139821, 21139949), (21140089, 21140151), (21140247, 21140309), (21140862, 21141090), (21141231, 21142363), (21142500, 21144183), (21144345, 21144647), (21144737, 21144807), (21144941, 21145719), (21145921, 21145991), (21146173, 21146306), (21146448, 21146585), (21146890, 21147133), (21147428, 21147494), (21147431, 21147494), (21147933, 21150210), (21147933, 21160637), (21161002, 21171651)] 2021-10-25 09:38:31.619 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:31.619 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.645 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0330067': ['FBtr0301701']} 2021-10-25 09:38:31.645 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0301701']] 2021-10-25 09:38:31.795 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024177: ['FBtr0076983', 'FBtr0330185'] 2021-10-25 09:38:31.848 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(6605202, 6605274), (6605576, 6605632)] 2021-10-25 09:38:31.849 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:31.851 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.925 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024179: ['FBtr0073279', 'FBtr0330072'] 2021-10-25 09:38:31.977 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(4066284, 4066346), (4067170, 4067233), (4067803, 4067863), (4068088, 4068158), (4068314, 4071408)] 2021-10-25 09:38:31.979 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:31.979 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:31.992 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0073279': ['FBtr0330072']} 2021-10-25 09:38:31.992 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330072']] 2021-10-25 09:38:32.002 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024182: ['FBtr0100536'] 2021-10-25 09:38:32.003 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024182 has a single transcript. 2021-10-25 09:38:32.012 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024183: ['FBtr0080718', 'FBtr0080719', 'FBtr0080720', 'FBtr0080721'] 2021-10-25 09:38:32.134 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15064948, 15065189), (15065456, 15066936), (15067689, 15067915), (15067689, 15067995), (15067689, 15070145), (15067689, 15067952)] 2021-10-25 09:38:32.136 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:32.136 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:32.303 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024184: ['FBtr0340626', 'FBtr0340627', 'FBtr0340628'] 2021-10-25 09:38:32.395 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17769615, 17776096), (17776275, 17776415), (17776275, 17776411), (17776555, 17777079)] 2021-10-25 09:38:32.397 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:32.398 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:32.546 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024187: ['FBtr0076769', 'FBtr0076768', 'FBtr0300412', 'FBtr0300413', 'FBtr0345912', 'FBtr0332787', 'FBtr0332788', 'FBtr0332789', 'FBtr0332790', 'FBtr0332791', 'FBtr0332792'] 2021-10-25 09:38:32.869 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7916884, 7926002), (7926837, 7927916), (7926837, 7927759), (7926837, 7927487), (7927579, 7927759), (7927820, 7927916), (7928117, 7928183), (7928404, 7928468), (7930085, 7930150), (7930373, 7930430), (7930609, 7930687), (7930745, 7931231), (7930745, 7931754), (7931249, 7931754), (7931790, 7932037), (7932142, 7932300), (7932706, 7932776), (7932932, 7932997), (7933234, 7935377), (7933234, 7933770), (7933791, 7935377), (7933791, 7933984)] 2021-10-25 09:38:32.874 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:32.874 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:33.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024188: ['FBtr0088126'] 2021-10-25 09:38:33.403 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024188 has a single transcript. 2021-10-25 09:38:33.416 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024189: ['FBtr0111043', 'FBtr0088635', 'FBtr0339277'] 2021-10-25 09:38:33.497 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8799230, 8812758), (8813106, 8819580), (8819733, 8821758), (8821932, 8823668), (8823822, 8823939), (8824076, 8825906), (8826074, 8826142), (8826274, 8828927), (8829064, 8829789), (8829943, 8830439), (8830577, 8830872), (8831037, 8831326), (8831605, 8831665), (8831947, 8832032), (8832456, 8832703), (8832870, 8833792), (8832870, 8834951), (8833981, 8834951), (8833981, 8841356), (8835101, 8841356), (8841511, 8843083), (8843195, 8846766), (8846948, 8851939)] 2021-10-25 09:38:33.499 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:33.499 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:33.642 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024191: ['FBtr0079134', 'FBtr0345545'] 2021-10-25 09:38:33.696 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(5721244, 5721295), (5723574, 5723637)] 2021-10-25 09:38:33.697 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:33.697 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:33.769 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024194: ['FBtr0073029'] 2021-10-25 09:38:33.769 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024194 has a single transcript. 2021-10-25 09:38:33.780 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024196: ['FBtr0086920'] 2021-10-25 09:38:33.780 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024196 has a single transcript. 2021-10-25 09:38:33.787 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024222: ['FBtr0304804'] 2021-10-25 09:38:33.787 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024222 has a single transcript. 2021-10-25 09:38:33.794 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024227: ['FBtr0080180'] 2021-10-25 09:38:33.795 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024227 has a single transcript. 2021-10-25 09:38:33.801 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024230: ['FBtr0081288'] 2021-10-25 09:38:33.802 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024230 has a single transcript. 2021-10-25 09:38:33.815 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024232: ['FBtr0087109', 'FBtr0331921', 'FBtr0331922', 'FBtr0336950', 'FBtr0336682', 'FBtr0336683'] 2021-10-25 09:38:33.980 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16641324, 16642051), (16641692, 16642942), (16641692, 16642051), (16642196, 16642942), (16643122, 16643497), (16643656, 16644745), (16643656, 16644055), (16644094, 16644745), (16644863, 16644921), (16645253, 16645316), (16645457, 16645660), (16645457, 16645656), (16645707, 16645881), (16647105, 16650812)] 2021-10-25 09:38:33.981 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16645881, 16651125, 'FBtr0087109_exon_10') contains intron (16647105, 16650812) 2021-10-25 09:38:33.982 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16645881, 16651125, 'FBtr0331921_exon_8') contains intron (16647105, 16650812) 2021-10-25 09:38:33.983 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16645656, 16651125, 'FBtr0336950_exon_8') contains intron (16645707, 16645881) 2021-10-25 09:38:33.984 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16645656, 16648790, 'FBtr0336682_exon_9') contains intron (16645707, 16645881) 2021-10-25 09:38:33.984 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16645660, 16647105, 'FBtr0336683_exon_8') contains intron (16645707, 16645881) 2021-10-25 09:38:33.985 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0087109_exon_10', 'FBtr0331921_exon_8', 'FBtr0336950_exon_8', 'FBtr0336682_exon_9', 'FBtr0336683_exon_8'] 2021-10-25 09:38:33.985 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:34.240 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024234: ['FBtr0072127', 'FBtr0343274'] 2021-10-25 09:38:34.300 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23851601, 23851682)] 2021-10-25 09:38:34.302 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (23851561, 23853247, 'FBtr0072127_exon_1') contains intron (23851601, 23851682) 2021-10-25 09:38:34.302 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0072127_exon_1'] 2021-10-25 09:38:34.302 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:34.385 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024236: ['FBtr0076624', 'FBtr0331417', 'FBtr0331418', 'FBtr0345601'] 2021-10-25 09:38:34.493 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8525389, 8530559), (8525704, 8530559), (8528780, 8530559), (8531149, 8531216), (8531565, 8531634), (8531804, 8531866), (8532874, 8532940)] 2021-10-25 09:38:34.495 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:34.495 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:34.681 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024238: ['FBtr0074441', 'FBtr0074442', 'FBtr0074443'] 2021-10-25 09:38:34.757 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17286876, 17286936), (17287190, 17287255), (17287534, 17287926), (17289037, 17291250), (17289037, 17301359), (17289037, 17295052), (17295458, 17300575)] 2021-10-25 09:38:34.758 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:34.759 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:34.876 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024244: ['FBtr0077530', 'FBtr0077531', 'FBtr0344768'] 2021-10-25 09:38:34.958 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(3539391, 3545073), (3539977, 3545073), (3545807, 3546730), (3545807, 3547261)] 2021-10-25 09:38:34.960 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:34.960 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:35.098 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024245: ['FBtr0081224', 'FBtr0336820'] 2021-10-25 09:38:35.154 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(19339276, 19339354), (19339651, 19339769), (19340934, 19362658)] 2021-10-25 09:38:35.156 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:35.156 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:35.243 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024248: ['FBtr0080088', 'FBtr0303904', 'FBtr0333412'] 2021-10-25 09:38:35.318 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10244158, 10244218), (10244387, 10244456), (10244545, 10244600), (10244853, 10244909), (10245103, 10245219), (10245351, 10245409), (10245590, 10245654), (10246039, 10247024), (10246039, 10246184), (10246039, 10246899), (10246533, 10246899)] 2021-10-25 09:38:35.320 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:35.320 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:35.450 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024249: ['FBtr0087183'] 2021-10-25 09:38:35.451 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024249 has a single transcript. 2021-10-25 09:38:35.461 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024250: ['FBtr0071048'] 2021-10-25 09:38:35.461 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024250 has a single transcript. 2021-10-25 09:38:35.471 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024251: ['FBtr0100598', 'FBtr0100599', 'FBtr0331744', 'FBtr0331745'] 2021-10-25 09:38:35.588 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21363601, 21363659), (21365259, 21369691), (21368125, 21369691), (21368953, 21369691), (21370722, 21370792), (21370874, 21370982)] 2021-10-25 09:38:35.590 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:35.591 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:35.757 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024273: ['FBtr0085352', 'FBtr0085353', 'FBtr0085354', 'FBtr0336768'] 2021-10-25 09:38:35.876 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(28825701, 28825764), (28825953, 28826009), (28826174, 28826241), (28826874, 28826946), (28827174, 28827284), (28827174, 28830501), (28830677, 28830993), (28830677, 28831817), (28830677, 28831218)] 2021-10-25 09:38:35.878 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:35.878 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:36.042 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024277: ['FBtr0072644', 'FBtr0072645', 'FBtr0072646', 'FBtr0072647', 'FBtr0072648', 'FBtr0072649'] 2021-10-25 09:38:36.206 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(998291, 998350), (998731, 998823), (999013, 999078), (999195, 999259), (999375, 999446), (999542, 999616), (999682, 1003395), (999682, 1000377), (1003653, 1003727), (1003821, 1007216), (1003821, 1009321), (1009379, 1009444), (1009739, 1024203), (1009739, 1018561), (1019272, 1022677), (1024407, 1024465), (1026346, 1026405), (1028511, 1029079), (1029623, 1033649), (1034065, 1034497), (1034065, 1034762)] 2021-10-25 09:38:36.209 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:36.209 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:36.505 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024285: ['FBtr0079875'] 2021-10-25 09:38:36.505 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024285 has a single transcript. 2021-10-25 09:38:36.515 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024288: ['FBtr0085735'] 2021-10-25 09:38:36.515 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024288 has a single transcript. 2021-10-25 09:38:36.523 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024289: ['FBtr0081627', 'FBtr0339932'] 2021-10-25 09:38:36.578 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7052649, 7052707), (7052741, 7053127), (7053597, 7053862), (7054081, 7054139), (7054261, 7054314)] 2021-10-25 09:38:36.579 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:36.579 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:36.661 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024291: ['FBtr0080434'] 2021-10-25 09:38:36.662 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024291 has a single transcript. 2021-10-25 09:38:36.671 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024293: ['FBtr0100356'] 2021-10-25 09:38:36.671 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024293 has a single transcript. 2021-10-25 09:38:36.679 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024294: ['FBtr0089041'] 2021-10-25 09:38:36.679 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024294 has a single transcript. 2021-10-25 09:38:36.687 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024314: ['FBtr0077980', 'FBtr0344015', 'FBtr0304710'] 2021-10-25 09:38:36.768 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1167954, 1168011), (1168638, 1168694), (1169561, 1169627), (1169958, 1170227)] 2021-10-25 09:38:36.770 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:36.770 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:36.905 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024315: ['FBtr0087114', 'FBtr0087115', 'FBtr0340067', 'FBtr0340068'] 2021-10-25 09:38:37.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16655972, 16656035), (16656566, 16656630), (16657194, 16657263), (16657439, 16658746), (16657439, 16663514), (16664204, 16667313), (16664204, 16667551), (16667448, 16667551)] 2021-10-25 09:38:37.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:37.018 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:37.187 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024319: ['FBtr0087116', 'FBtr0445749', 'FBtr0445750'] 2021-10-25 09:38:37.265 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16653422, 16653477), (16653581, 16653647), (16653774, 16653828), (16654277, 16654334), (16654625, 16654684)] 2021-10-25 09:38:37.266 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16653828, 16654625, 'FBtr0445749_exon_2') contains intron (16654277, 16654334) 2021-10-25 09:38:37.267 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16653647, 16654625, 'FBtr0445750_exon_2') contains intron (16653774, 16653828) 2021-10-25 09:38:37.267 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0445749_exon_2', 'FBtr0445750_exon_2'] 2021-10-25 09:38:37.267 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:37.401 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024320: ['FBtr0079957', 'FBtr0343608', 'FBtr0343609', 'FBtr0343610', 'FBtr0303905', 'FBtr0303906', 'FBtr0303907'] 2021-10-25 09:38:37.599 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10214055, 10214124), (10214991, 10215057), (10216450, 10216509), (10216800, 10216860), (10217180, 10217340), (10217180, 10217352), (10217533, 10217599), (10217818, 10217882), (10217959, 10218015), (10218172, 10218231), (10218402, 10218778), (10218889, 10221135), (10218889, 10219878), (10218889, 10220868), (10218889, 10220796), (10218889, 10220834), (10218889, 10220692)] 2021-10-25 09:38:37.602 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:37.603 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:37.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024321: ['FBtr0082941', 'FBtr0082942', 'FBtr0306742', 'FBtr0347151'] 2021-10-25 09:38:38.011 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14331081, 14341221), (14341583, 14344224), (14345184, 14367192), (14345184, 14349921), (14345184, 14372546), (14350003, 14367192), (14367496, 14369389), (14367499, 14369848)] 2021-10-25 09:38:38.013 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:38.013 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:38.176 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024326: ['FBtr0081892', 'FBtr0300443', 'FBtr0334320'] 2021-10-25 09:38:38.261 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(8648896, 8648961), (8649047, 8649278), (8649419, 8649477), (8650319, 8650480)] 2021-10-25 09:38:38.263 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:38.263 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:38.395 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024329: ['FBtr0083684', 'FBtr0331353'] 2021-10-25 09:38:38.450 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(18733364, 18733428), (18733608, 18733753), (18736469, 18736529), (18737043, 18737106), (18737888, 18738397), (18738598, 18743000), (18738598, 18739296)] 2021-10-25 09:38:38.451 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:38.452 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:38.531 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024330: ['FBtr0082161', 'FBtr0082162', 'FBtr0301872', 'FBtr0301873', 'FBtr0339719'] 2021-10-25 09:38:38.673 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(9766727, 9766787), (9766893, 9766947), (9767122, 9767176), (9767878, 9768164), (9767878, 9768363), (9767878, 9768906), (9767878, 9767976)] 2021-10-25 09:38:38.675 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:38.676 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:38.917 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024352: ['FBtr0078131'] 2021-10-25 09:38:38.918 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024352 has a single transcript. 2021-10-25 09:38:38.932 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024360: ['FBtr0070236', 'FBtr0070237', 'FBtr0332288'] 2021-10-25 09:38:39.016 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1345098, 1345174), (1346120, 1346174), (1346120, 1348221), (1349077, 1349143)] 2021-10-25 09:38:39.017 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1344871, 1346120, 'FBtr0070236_exon_3') contains intron (1345098, 1345174) 2021-10-25 09:38:39.018 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1344871, 1346120, 'FBtr0070237_exon_2') contains intron (1345098, 1345174) 2021-10-25 09:38:39.018 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070236_exon_3', 'FBtr0070237_exon_2'] 2021-10-25 09:38:39.019 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.151 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024361: ['FBtr0070211', 'FBtr0303284'] 2021-10-25 09:38:39.205 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1346679, 1347268), (1347119, 1347268)] 2021-10-25 09:38:39.206 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:39.206 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.279 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024362: ['FBtr0070209', 'FBtr0310619'] 2021-10-25 09:38:39.337 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1342529, 1342586), (1343214, 1343289), (1343535, 1343778)] 2021-10-25 09:38:39.338 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (1342105, 1343214, 'FBtr0070209_exon_1') contains intron (1342529, 1342586) 2021-10-25 09:38:39.339 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0070209_exon_1'] 2021-10-25 09:38:39.339 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.413 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024364: ['FBtr0070212'] 2021-10-25 09:38:39.414 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024364 has a single transcript. 2021-10-25 09:38:39.427 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024365: ['FBtr0070235', 'FBtr0342738', 'FBtr0332287'] 2021-10-25 09:38:39.503 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1351037, 1351101), (1351280, 1351344), (1351926, 1351993), (1352228, 1352285), (1352487, 1352653), (1353198, 1353252), (1353198, 1353255)] 2021-10-25 09:38:39.504 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:39.505 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.623 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024366: ['FBtr0070238', 'FBtr0342730'] 2021-10-25 09:38:39.676 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(1333436, 1333502), (1333717, 1337899), (1333717, 1341324)] 2021-10-25 09:38:39.677 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:39.677 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024371: ['FBtr0081501', 'FBtr0346451'] 2021-10-25 09:38:39.807 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21154579, 21154645), (21154985, 21155106), (21155365, 21155571), (21155681, 21155743)] 2021-10-25 09:38:39.809 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:39.809 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:39.885 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024432: ['FBtr0083575'] 2021-10-25 09:38:39.885 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024432 has a single transcript. 2021-10-25 09:38:39.897 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024491: ['FBtr0083279', 'FBtr0347200', 'FBtr0347201'] 2021-10-25 09:38:39.976 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16186638, 16186711), (16187106, 16189202)] 2021-10-25 09:38:39.977 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (16186711, 16189564, 'FBtr0347200_exon_1') contains intron (16187106, 16189202) 2021-10-25 09:38:39.977 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0347200_exon_1'] 2021-10-25 09:38:39.978 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:40.122 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024509: ['FBtr0084409', 'FBtr0346160'] 2021-10-25 09:38:40.178 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23356952, 23357397)] 2021-10-25 09:38:40.179 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:40.180 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:40.255 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024510: ['FBtr0072790'] 2021-10-25 09:38:40.256 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024510 has a single transcript. 2021-10-25 09:38:40.266 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024542: ['FBtr0076835', 'FBtr0333367'] 2021-10-25 09:38:40.321 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(7242296, 7242359)] 2021-10-25 09:38:40.322 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:40.323 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:40.403 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024555: ['FBtr0082817', 'FBtr0114604', 'FBtr0344783'] 2021-10-25 09:38:40.488 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13684150, 13687569), (13684150, 13684424), (13684524, 13687569), (13687975, 13688045), (13688233, 13688346), (13689285, 13689360), (13689538, 13689597), (13689853, 13689912), (13690185, 13690252), (13690185, 13690273), (13690386, 13690534), (13691298, 13691634)] 2021-10-25 09:38:40.490 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:40.490 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:40.605 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024556: ['FBtr0087670', 'FBtr0301389'] 2021-10-25 09:38:40.664 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(13507658, 13507714)] 2021-10-25 09:38:40.666 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (13507556, 13509332, 'FBtr0301389_exon_1') contains intron (13507658, 13507714) 2021-10-25 09:38:40.666 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0301389_exon_1'] 2021-10-25 09:38:40.667 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:40.740 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024558: ['FBtr0084280'] 2021-10-25 09:38:40.741 | INFO | trand.event_analysis:do_ea_gene:521 - Gene FBgn0024558 has a single transcript. 2021-10-25 09:38:40.754 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024689: ['FBtr0080999', 'FBtr0081000', 'FBtr0305685', 'FBtr0346626', 'FBtr0346627'] 2021-10-25 09:38:40.902 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(17479113, 17479171), (17480242, 17480295), (17480919, 17480972), (17480919, 17480968)] 2021-10-25 09:38:40.903 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17480295, 17481029, 'FBtr0081000_exon_1') contains intron (17480919, 17480972) 2021-10-25 09:38:40.904 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (17480295, 17480999, 'FBtr0346626_exon_1') contains intron (17480919, 17480972) 2021-10-25 09:38:40.904 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0081000_exon_1', 'FBtr0346626_exon_1'] 2021-10-25 09:38:40.904 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:41.144 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024698: ['FBtr0089257', 'FBtr0089258'] 2021-10-25 09:38:41.199 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(14497444, 14498557), (14501296, 14501353), (14501839, 14501897), (14502461, 14502530), (14502461, 14502635)] 2021-10-25 09:38:41.200 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:41.200 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:41.284 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024728: ['FBtr0089090', 'FBtr0310536', 'FBtr0310537'] 2021-10-25 09:38:41.367 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(663742, 663854), (664340, 664987), (664340, 665950), (665305, 665950), (666932, 668419), (666932, 669129), (668574, 669129)] 2021-10-25 09:38:41.369 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:41.369 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:41.492 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024732: ['FBtr0087978', 'FBtr0330629'] 2021-10-25 09:38:41.545 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(12044908, 12047975), (12048191, 12048474), (12048746, 12048804)] 2021-10-25 09:38:41.546 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:41.546 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:41.556 | DEBUG | trand.event_analysis:check_for_tx_duplicates:300 - Identical records: {'FBtr0087978': ['FBtr0330629']} 2021-10-25 09:38:41.556 | DEBUG | trand.event_analysis:check_for_tx_duplicates:304 - Duplicate records: [['FBtr0330629']] 2021-10-25 09:38:41.567 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024733: ['FBtr0299869', 'FBtr0299870', 'FBtr0333910'] 2021-10-25 09:38:41.653 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(23093878, 23094683), (23094846, 23094905), (23095211, 23095274), (23095305, 23095425), (23095305, 23095436)] 2021-10-25 09:38:41.654 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:41.655 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:41.771 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024734: ['FBtr0080857', 'FBtr0080856', 'FBtr0332357', 'FBtr0332358'] 2021-10-25 09:38:41.880 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(16247186, 16247252), (16247384, 16248601), (16248768, 16248830), (16249091, 16250080), (16249706, 16250080), (16250158, 16257075), (16250158, 16256049), (16250158, 16251623), (16250158, 16251240)] 2021-10-25 09:38:41.882 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:41.882 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:42.043 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024740: ['FBtr0080123', 'FBtr0340247'] 2021-10-25 09:38:42.101 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(10702805, 10702867), (10702996, 10705027), (10705177, 10705231), (10705497, 10705700), (10705878, 10708858), (10705878, 10706082)] 2021-10-25 09:38:42.103 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:42.103 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:42.184 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024754: ['FBtr0087351', 'FBtr0087352'] 2021-10-25 09:38:42.237 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(15566591, 15566802), (15566967, 15567028), (15567172, 15567242), (15567713, 15567828), (15567713, 15568151), (15567840, 15568151), (15568506, 15568750), (15568826, 15569118)] 2021-10-25 09:38:42.238 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:42.239 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:42.321 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024804: ['FBtr0113715', 'FBtr0331780', 'FBtr0331781', 'FBtr0331782', 'FBtr0331783'] 2021-10-25 09:38:42.463 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(27279422, 27279480), (27279539, 27292881), (27279539, 27323293), (27293013, 27293075), (27293271, 27331993), (27323574, 27331993), (27332108, 27332168), (27332346, 27350219), (27350321, 27350596), (27350321, 27380952), (27381088, 27390943), (27381088, 27420678), (27391053, 27420678), (27420841, 27420900), (27420841, 27420951), (27421014, 27421956)] 2021-10-25 09:38:42.465 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:42.466 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:42.719 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024806: ['FBtr0072520', 'FBtr0305325', 'FBtr0332108', 'FBtr0332109', 'FBtr0332110'] 2021-10-25 09:38:42.858 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(250613, 250670), (250819, 250876), (251325, 251389), (252050, 252111), (252463, 252538), (252481, 252538), (252643, 252693), (252775, 252834), (252944, 253313), (252995, 253313), (254636, 254696), (255037, 255162), (255715, 255813), (255904, 256213), (256590, 256648), (256593, 256648), (257056, 257129), (257201, 257552)] 2021-10-25 09:38:42.861 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: [] 2021-10-25 09:38:42.862 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts 2021-10-25 09:38:43.110 | DEBUG | trand.event_analysis:do_ea_gene:519 - Transcripts in FBgn0024807: ['FBtr0077372', 'FBtr0077371', 'FBtr0077373', 'FBtr0300373', 'FBtr0300374', 'FBtr0301292', 'FBtr0301293', 'FBtr0301294'] 2021-10-25 09:38:43.352 | DEBUG | trand.event_analysis:do_ea_gene:531 - Intron data: [(21626252, 21626312), (21626890, 21628360), (21628709, 21629973), (21628709, 21630066), (21628709, 21628843), (21628754, 21628847), (21628754, 21628843), (21628754, 21628919), (21628754, 21629973), (21629792, 21629973)] 2021-10-25 09:38:43.354 | DEBUG | trand.event_analysis:get_ir_exon_transcript:260 - IR detected, exon (21628360, 21630148, 'FBtr0300373_exon_1') contains intron (21628709, 21629973) 2021-10-25 09:38:43.355 | DEBUG | trand.event_analysis:do_ea_gene:540 - IR containing exons: ['FBtr0300373_exon_1'] 2021-10-25 09:38:43.355 | INFO | trand.event_analysis:do_ea_gene:541 - Not attempting to remove IR-containing transcripts