FastQCFastQC Report
Sun 3 Mar 2019
59_S8_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename59_S8_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1051
Sequences flagged as poor quality0
Sequence length76
%GC70

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATGTCCCCTCTTGGCCTTGTCTGCTTTATTGTAATCTAACCAGGAAA50.47573739295908657No Hit
CCGGGGGTTCCCGCCCCCACGGCGCGGGGCGCACGCCACACGCGCGGCAG40.3805899143672693No Hit
GGCAGCCCCTCGGCGGCCGGCCGGCGCACGCGTCACACCGGCCCGAACCC20.19029495718363465No Hit
CGCGGGAAGGCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGC20.19029495718363465No Hit
CGGGGGTTCCCGCCCCCACGGCGCGGGGCGCACGCCACACGCGCGGCAGG20.19029495718363465No Hit
CGGGCGGGCGGGCGCGCGCGCGTACGCGCGGGGAGGGCGAGGAGGACGGG20.19029495718363465No Hit
CCGGGAGCGGGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAG20.19029495718363465No Hit
CGGCGCGGCCCCGGCCGGGGAGCGGAGTCCGCGGTGGAGGCGCGGGAGGG20.19029495718363465No Hit
GGGCGGGCGCGCGCGCGTACGCGCGGGGAGGGCGAGGAGGACGGGCGGGG20.19029495718363465No Hit
CCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGGCGGGCGCGCGC20.19029495718363465No Hit
CGGGCGCGCGCGCGTACGCGCGGGGAGGGCGAGGAGGACGGGCGGGGCCT20.19029495718363465No Hit
CGGCCGCCGCGGCGGCGGCGGCGGCGCGGCCCCGGCCGGGGAGCGGAGTC20.19029495718363465No Hit
CGGGCGGGCGCGCGCGCGTACGCGCGGGGAGGGCGAGGAGGACGGGCGGG20.19029495718363465No Hit
TCTCAGCCGGGCGCGCCCCCCTCTCCCCCCCGCCACCCGACGCGTGACCA20.19029495718363465No Hit
CGGGAACTCGGCCCGAGCCGGCTCTCTCTTTCCCTCTCCGTCTTCGCGGG20.19029495718363465No Hit
GGCGGGTCCGGAAGGGGAAGGGTGCCGGCGGGGAGAGAGGGTCGGGGGAG20.19029495718363465No Hit
CGCGCGCCTGCCGCGCGTGTGGCGTGCGCCCCGCGCCGTGGGGGCGGGAA20.19029495718363465No Hit
GGGAAGGCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGC20.19029495718363465No Hit
CGGGACCTTCCACCCGGCCGGGGCCGACGAACCCCGAACCCCGAGCCGCG20.19029495718363465No Hit
GCGGGAACGACACACCACCGTTCGGCCTCGGGCACCTGAGGGACAACCCG20.19029495718363465No Hit
GGAGGGGCCCGGCCCCTCCCGCGCCTCCACCGCGGACTCCGCTCCCCGGC20.19029495718363465No Hit
GGCGGCTCCGCCGCCGCGTCCTCGGACCCGTCCCCCCGACCTCCGCGGGG20.19029495718363465No Hit
GTTTGCGCGAGCGTCGGCTCCGCCTGGGCCCTTGCGGTGCTCCTGGAGCG20.19029495718363465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)