FastQCFastQC Report
Sun 3 Mar 2019
45_S7_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename45_S7_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length76
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCGGCTACTTTTTGTGTTTTTAGTGGAGATGGGGTTTCCCCGTGTTGG14.3478260869565215No Hit
ATTGCCTCACTCCAACCCCTGCCTCCAAGCATCAAGCAATTCTCCTGCCT14.3478260869565215No Hit
TGAAGAGGGCTTGCGACATGATAGCACTTACATAATGATAAAGCAGTATA14.3478260869565215No Hit
GGGGGGGGGGCGGTGGGGATGATAGAAGGTTAATTGTGTTAAAAGGTATA14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGG14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGTGGGTGTTTTTTGGGGTTGGGTTGGG14.3478260869565215No Hit
GCCACAAGTACATGTAAATAATTCCTCATTCTAGAGGCTAATTGAAATAA14.3478260869565215No Hit
GACGGGGGAGACCGCCGACGAGGTAAAAGCAGGAAAAAGGAGAGAAGGCA14.3478260869565215No Hit
GCCGGCGCGCCCCCGCGGGGGAGACACCCCACGAGATCGGAAGAGCGTCG14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTGGGGGGGGGGGG14.3478260869565215No Hit
ACCATGCCCTGGCAGCCTAGTGGGCGGAGGCGGAGCTGGGGGGGTCCTGG14.3478260869565215No Hit
CCGCCGCCGCCGCCGCCGCGCGCCGAGGAGGAGGGGGGAACGGGGGGCGG14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTGGGTGTGGGTGGGGTG14.3478260869565215No Hit
CGGGGTCTCGCTATGTTGCTCACGCTGGAGTGCAGTGGCTATTCACAGGC14.3478260869565215No Hit
AATGACGCCCACGCTATACTACATTGTCGCCGTCTTAGCTCACTTCAACC14.3478260869565215No Hit
GATCAGTGATGTTGATACCTTTTCATATGTGTATTTGCCATTTATATGTC14.3478260869565215No Hit
GGTCACACTCCCCCCACCCGCCAGCCGCTCCTCCTCGGGCCCGCAGAGGC14.3478260869565215No Hit
CGGGGGGGAGACGGCGGAGGAGGGGATAGAAGGTGAATGACGGAAAAAAA14.3478260869565215No Hit
TTAGTGTGGATAAACAATCCTAAGTCATAATCACAAACATGGAAGCTAAT14.3478260869565215No Hit
ATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCC14.3478260869565215No Hit
CATGAGCGCCCCGCTCTACTGGCGGCAGTCGGTGCAGATCGGAAGAGCGT14.3478260869565215No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG14.3478260869565215No Hit
CGAGCCGCGCCCCTCCCACGCGGGGAAGGGCGCCCGCCTGCTCTCGGTGA14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)