FastQCFastQC Report
Tue 25 Mar 2025
Mio-11_S2_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameMio-11_S2_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2284
Sequences flagged as poor quality0
Sequence length101
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27311.952714535901926No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC100.43782837127845886No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC70.3064798598949212No Hit
GGGAGAAGAAGAAGCCGATGATGACGAGGACGATGAGGATGGTGATGAGG50.21891418563922943No Hit
AAAAAGGACAGTCTCTACTAGTATAGAAGCAGACATATGCACATGTGATA50.21891418563922943No Hit
GGAAGATGTTCTTGGCATACTTGCAGTACATTTGTGAAAGAGAAGAAATG50.21891418563922943No Hit
GCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCC50.21891418563922943No Hit
AAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTG40.17513134851138354No Hit
CGCCCGTCCACACCCGCCGCCAGCTCACCATGGATGATGATATCGCCGCG40.17513134851138354No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCG40.17513134851138354No Hit
AGGAGATAAGGGGNGACAATGTGAAACACTACAAAATTAGGAAACTTGAC40.17513134851138354No Hit
CCCTACCCCACGCCCGGACCCTCGACGCCCCCCGCCGGGTCCCCCACTCA40.17513134851138354No Hit
TGGCAGTCCTGCTACGGGGCTTTGCAGCATGGCCCCGGGAATGGTGGGGG40.17513134851138354No Hit
CTGGGAAATGATTTAACCTTGGGGCCTCAGTGGCACCCGTGCAGGAAGGG40.17513134851138354No Hit
CGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGA40.17513134851138354No Hit
CTTTTCTCTCAGCATAGGTATGCTTACTATGACCTTCCAAGTTTGACTTG40.17513134851138354No Hit
CGGGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAA40.17513134851138354No Hit
AAATATTGAAATATATCTATGTCTTTCTGTGTGATCAGATCGTGCATAAA40.17513134851138354No Hit
CGAGGAAGCAGCTGGCCACCAAGGCGGCCCGCAAGAGCGCGCCGGCCACG40.17513134851138354No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT40.17513134851138354No Hit
ATAGAACTATCTGCATTATCTATGCAGCATGGGGTTTTTATTATTTTTAC40.17513134851138354No Hit
CCCCTTCCAAGCCAGCCTCTGCAAAGAAAGGAAAGGCTGAGAGCAGCAAC40.17513134851138354No Hit
GGAGAAGATCGTGAGGGGCATCATCATTCAGGGTGGGAAGCACCGAGAGA40.17513134851138354No Hit
GGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.17513134851138354No Hit
TGGAAGTGGAGCCCGTGGGAATGCTGAAGGAAGGGGACCGCGTGGAAATC40.17513134851138354No Hit
CGGGGAAAGAAGANCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGA30.13134851138353765No Hit
CCTGAGCCGGCGCCCTCCCGGGAGCGCCCGTCACGGGGGGCCTCTGTGAT30.13134851138353765No Hit
AAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGG30.13134851138353765No Hit
GATTTCTCTGGGGCCAGACAGTGTGTTGTTTATTCCACAGAGACTCCAAG30.13134851138353765No Hit
AGAAAACCACATGGAAGACTCCCAGGATTTAAATGAACAATCAGTAAAGA30.13134851138353765No Hit
CTCTGAACTAGGTGCTTCATATACATTATCCTAAATTATCTCAACATATG30.13134851138353765No Hit
CGGGCACCAGAGTGGATGGTATAGACAAGAGTCTCCCTATGTTGCCCAGG30.13134851138353765No Hit
CTCTGTTCTTCCTTAAGTGCTCCCTTTTTACTAGGTTCCTCTACAAAAGC30.13134851138353765No Hit
GGAAAAGCTAATAAGGACAGGACAGAAGACAAGCAAGATGAATCTGTGAA30.13134851138353765No Hit
ATTTGTGGCTCCTGAGTTGAGTGATTTTGGTGAAAGAAAGCACATCCAAA30.13134851138353765No Hit
CTTCAGGAGACAGCTGCTCATCTCTCCTCCTGCGGCCCACGGTGGTGCCA30.13134851138353765No Hit
ATTTTCCCCCACTACTGCAGCACCTCCAGGCCTGTTGCTATAGAGCCTAC30.13134851138353765No Hit
ATCATCTCAATTATTTTTCGGCAAATATTTATTTCAGTCCCCTTCTCTCT30.13134851138353765No Hit
ATTGATCGCCGTTCTGGTAAAAAGCTGGAAGATGGCCCTAAATTCTTGAA30.13134851138353765No Hit
CAGGAATAAATGTCCCCCTTGTCTTTGGGTGGGGCCCCCTTGTGGCTTAC30.13134851138353765No Hit
CACTGGCCAGGCATTCCCCTTCACAACACTAGAGACCTACACAGTGAACT30.13134851138353765No Hit
GTCACTACAGCCAGCCTCCTGGACTATGACACTGTGGCTGGGGCAGACAA30.13134851138353765No Hit
CAGATTCCAGTGGTTTCCTTAAGAAACTGGAGTTGGCTCATCCCACTCAG30.13134851138353765No Hit
CTGTGCTGGTTGGTTATAAAGCTGTGTATCGGATCAGCTTTGCCATGGCC30.13134851138353765No Hit
CCTCTCTGCTTTGAGAGCTGCTTTCTTGCTCTGATGCTGACTTGGCATTT30.13134851138353765No Hit
TATCACCCCAACCAGGTAGTAGAAGGCTGTTGTTCAGATATGGCTGTTAC30.13134851138353765No Hit
CTCACTGCAACTTCTGCCTGCCAGGTTCAAGCAATCCTGCCTCAGCCTCC30.13134851138353765No Hit
CTGGGCTCAAGTGATTCTCCTTCCTTGGCCTCCTGAGTAGCTAGGAACAC30.13134851138353765No Hit
ATCTAACCCAGGCCCTGTTGCTATTTCAGATGTTGCACCTAGTGCTAGCA30.13134851138353765No Hit
AACACTTTGGGAGGCTGAGGAGGAAGGATAGCTTGAGGCCAGGAGTTTGA30.13134851138353765No Hit
CTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAG30.13134851138353765No Hit
AGTATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCG30.13134851138353765No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA30.13134851138353765No Hit
ATTTTTTAGGAAATGTTTTTAATAAAAGAAAATTACAAAAAAAAATTTTA30.13134851138353765No Hit
GCTGAGCCTCCAAGATCCTCACACACCTCCTGTGTGGCAGGTGCTTCACA30.13134851138353765No Hit
GGCGAATTTTCAGTTGATAGACCGATTATTGACCGACCTATTCGAGGTCG30.13134851138353765No Hit
CTCGCTCTGTATCACTAGCCGCCATAGTTCAGAGTCCCGGCCGCTAGAGC30.13134851138353765No Hit
CAGGGGGAACATCTCAGCAACAGCACCTCAGCCTTCAGCACACGCTCAGA30.13134851138353765No Hit
GAAGTCCTGGTGTGAAAGGAGCCAAGGGCGGGCCTGGGCCCCGCGGACCC30.13134851138353765No Hit
CACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCACCA30.13134851138353765No Hit
CTTTGCTCACTGCAACCTCCACCTACTGGGTTCAAGTGATTCTCCTGCCT30.13134851138353765No Hit
CTTTTATATCAAAAGAATATGCTATTCAGCTTGAATTCGCGGGTGATTAT30.13134851138353765No Hit
ACTTAGCAAGGAGATCGCTACTCAAAAAAGTAGGTTGTCTGAAAGTCAAG30.13134851138353765No Hit
ATTTAATAACATACTCCTTTTTGAAAGTTGCCTTTTCTCTCCACCCTTGA30.13134851138353765No Hit
GTGAGGTTTCTTTTCTTCTGCCCTAACTATTGTGTAGCCTCTTATGCTGA30.13134851138353765No Hit
GGCTAAAGAAGCANATTTGGATGTTGCAACAATAACAAAAACTGTAGTTG30.13134851138353765No Hit
GGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTC30.13134851138353765No Hit
GTTAGTCCTTTCCTGGCTGTGACCCGCCACACTCACTGTCAGTATTAAGG30.13134851138353765No Hit
CCGCACGTCAGCCCGACTCAGCCTGCCAATCGCAGGACCCAGAGGGCCCT30.13134851138353765No Hit
GGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGA30.13134851138353765No Hit
TGCTTTGCCAGGGGATGGAGAGATGCTGCCTATTGCTGGGGTTCCTGACT30.13134851138353765No Hit
CACTTATCCAAAATGCTTGGGACCAGAGGGGTTGTGAATTTCCGGTTTTT30.13134851138353765No Hit
AAAGAACTAGAACGGCAGAAAGAAAAGGAAAAAGAACTACAAAAGATGAA30.13134851138353765No Hit
CTGCTCCTGATATCAGTGTGAAGGGGCCTGCCTTTAATATGGCATCTCCT30.13134851138353765No Hit
AGCCCCGCCACCAGCAGCGCGCTGTCGGCCCAGGCCGCGCCATCCTCCAG30.13134851138353765No Hit
GGTGACGCCTGGGCTGGGCGCTCCCGCGGGGGCCCCAGGGCCGCTTCCTG30.13134851138353765No Hit
CTTGTCAATAACCTTATGATGTGGGTATTATTACATTATTCCTATTGTAT30.13134851138353765No Hit
TGGCTACTGCATATGACACCAAATGCTGCAAGGCCAACATTCTATGCAAT30.13134851138353765No Hit
GGAAAATCAAAGTTTGACAAAAACCGTAGAAGAGCTTCGGACTACTGTGG30.13134851138353765No Hit
GCCGAGACAGGCGGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTTACC30.13134851138353765No Hit
GTGAGGCTTGAAAACACACCACATTGAAAATCCTGCCACAGCAGCAGCCG30.13134851138353765No Hit
TGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCAAGGTC30.13134851138353765No Hit
GCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGA30.13134851138353765No Hit
GAGCAGCTGGGACCACAGGCGCCCACCACCACGCCTGGCTAATTTTTTTG30.13134851138353765No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCT30.13134851138353765No Hit
CTCAGTCAACAGGGTCTCAGTGACAATCTCATCGATTTGAATCTCGAAGG30.13134851138353765No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers