@include "_sc_rna_analyzer_stages.mro"

call RUN_MULTIGENOME_ANALYSIS(
    raw_matrices_h5 = "/ufrc/ewang/lancetdenes/libLTD/h2b_run2/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/_BASIC_SC_RNA_COUNTER/COUNT_GENES/fork0/join-u85e8945911/files/matrices_h5.h5",
    filtered_matrices_h5 = "/ufrc/ewang/lancetdenes/libLTD/h2b_run2/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/_BASIC_SC_RNA_COUNTER/FILTER_BARCODES/fork0/join-u85e8948a9f/files/filtered_matrices_h5.h5",
    is_multi_genome = false,
    skip = false,
)